Prupe.1G524600_v2.0.a1

RING-H2 finger protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
43002699 .. 43004329
1631 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G524600.1

Sequence Viewer

Length: 1248 bp
ATGAGTTTCAACCATGCCGCCTTGTTGGCGTGGACGCTCAGCTTCCTCCTGTTCTCTCAGCAGATCACAGCCCAATACGCACCGCCTCAGCCACCATCCAACAACTCAGGCGGGCCGAGGTTCGACATCAAGATGGCCGTGGTGATGGTGGTCCTGGTCGTCGTCTTCTTCATCCTCGGCTTCTTGTCCGTCTACACCCGCCAGTGCGCCCAGACCCGCCTCCAGGGGCATGTGGACCTTGCGCTCCGCAACGGCATGGCACGTGGGCTCGACCCCGCCGTCATCGAGACCTTCCCGGCTTTCCTCTACTCCGACGTCAAGGGGCTCCAGCTCGGCAAGGACTCGCTCGAATGCGCCGTGTGCTTAAACGAGTTTCAAGATGACGAAACGCTGCGTTTGATCCCCAAATGCGATCACGTGTTCCACCCGGATTGTATCGACACGTGGCTGCTCTCTCACTCCACTTGCCCGGTTTGCCGAGCCTACCTGGTTCCCAAGCCGGGCGAAGAGCCCTACACTTGGGTTGACCCGACTGACCCCGATATCGAATCAGGTCAACCTGATGCAGGCCCGTGTACTGTGGATGAACCGCCACCACCGCATATGCCACCCCGCCAGGTGTCAGTTCGGGTGGTTGAAGATCAAATCAAAGAGGAAGAATCTCAAACGCCAGTGGTTATTAATTTGGTGAATGTAAGTGAAGGAACCAATCAAAGAGGTCCACCTAGGTCGAGGTCAACAGGTTTTAGACCGCCGAGGTCAGGATCAACTGGGAGGCGATTCACTGGAATATTATTTCCAAGGTCACACTCGACCGGTCACTCGTTGGTTCGACCCGGCGAGAACGTCGAGAAGTTTACACTACGATTACCAGACGAGGTACGAGCTCAGCTCATGAACTCGGCCTTGATTCGTAGCAGGAGTAGCAACGTGGCATTCCCAAGGGCTGGGAGTACAAGGAAAGGTCTTAGGAATGACAGCGTGCGTGGAAAGAGCCCCAGTTTGTATGAGCGGTTCGACCCAAGCTCAGGATCAAACCGGGCGAGCCGGTCAAGCCGGTGGGGTTTCTCGATGATGCCACCTTTTGTTTCTCGGAACGGTTCTGTTAGGAACCAAATTGGAGATAATGACGTGACAACCCAGTCGACAGTTGCTCCATCGGAATCGAAGAAATCACAGTTGGCTCATATCGACGGTGATGATGATGAACAGTCAACTGATGCCTTGCGGAGAAAAGATCAGGTTTAA

Protein Analysis

416

Amino Acids

45.89

Weight (kDa)

7.11

Isoelectric Point (pI)

59.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 278, 1141
AatII GACGTC 1 cut(s) 318
AccB7I CCANNNNNTGG 1 cut(s) 947
AccBSI CCGCTC 1 cut(s) 1012
AccI GTMKAC 2 cut(s) 192, 1145
AclWI GGATC 3 cut(s) 394, 772, 1039
AcoI YGGCCR 1 cut(s) 135
AcvI CACGTG 3 cut(s) 263, 418, 444
AcyI GRCGYC 1 cut(s) 315
AfaI GTAC 3 cut(s) 577, 882, 955
AfiI CCNNNNNNNGG 7 cut(s) 223, 500, 519, 566, 761, 947, 1028
AflIII ACRYGT 2 cut(s) 417, 441
AgeI ACCGGT 1 cut(s) 815
AgsI TTSAA 3 cut(s) 10, 377, 638
AjiI CACGTC 1 cut(s) 1132
AjnI CCWGG 4 cut(s) 153, 222, 486, 615
AjuI GAANNNNNNNTTGG 2 cut(s) 1163, 1195
AluBI AGCT 5 cut(s) 42, 331, 887, 892, 1026
AluI AGCT 5 cut(s) 42, 331, 887, 892, 1026
Alw21I GWGCWC 1 cut(s) 889
Alw26I GTCTC 1 cut(s) 281
AlwI GGATC 3 cut(s) 394, 772, 1039
AoxI GGCC 4 cut(s) 113, 135, 568, 903
ApeKI GCWGC 2 cut(s) 391, 448
AseI ATTAAT 1 cut(s) 681
AsiGI ACCGGT 1 cut(s) 815
AspA2I CCTAGG 1 cut(s) 725
AspLEI GCGC 3 cut(s) 209, 244, 356
AspS9I GGNCC 5 cut(s) 113, 151, 235, 569, 719
AsuC2I CCSGG 6 cut(s) 296, 428, 470, 501, 837, 1040
AsuHPI GGTGA 3 cut(s) 154, 700, 1208
AvaII GGWCC 3 cut(s) 151, 235, 719
AvrII CCTAGG 1 cut(s) 725
BanII GRGCYC 5 cut(s) 270, 327, 513, 889, 998
BbrPI CACGTG 3 cut(s) 263, 418, 444
BbsI GAAGAC 1 cut(s) 157
Bbv12I GWGCWC 1 cut(s) 889
BbvCI CCTCAGC 1 cut(s) 87
BbvI GCAGC 2 cut(s) 378, 435
BccI CCATC 4 cut(s) 103, 127, 139, 1165
BceAI ACGGC 4 cut(s) 122, 263, 268, 341
BciT130I CCWGG 4 cut(s) 155, 224, 488, 617
BcnI CCSGG 6 cut(s) 296, 428, 470, 501, 837, 1040
BcoDI GTCTC 1 cut(s) 281
BfaI CTAG 1 cut(s) 726
BglI GCCNNNNNGGC 1 cut(s) 26
BisI GCNGC 3 cut(s) 18, 392, 449
BlnI CCTAGG 1 cut(s) 725
BlpI GCTNAGC 2 cut(s) 38, 888
BlsI GCNGC 3 cut(s) 19, 393, 450
Bme18I GGWCC 3 cut(s) 151, 235, 719
BmgBI CACGTC 1 cut(s) 1132
BmgT120I GGNCC 5 cut(s) 113, 151, 235, 569, 719
BmiI GGNNCC 4 cut(s) 326, 492, 706, 1112
BmrI ACTGGG 3 cut(s) 780, 993, 1135
BmsI GCATC 3 cut(s) 553, 1065, 1210
BmuI ACTGGG 3 cut(s) 780, 993, 1135
BpiI GAAGAC 1 cut(s) 157
BplI GAGNNNNNCTC 2 cut(s) 876, 908
BpmI CTGGAG 2 cut(s) 206, 311
Bpu10I CCTNAGC 2 cut(s) 87, 1027
Bpu1102I GCTNAGC 2 cut(s) 38, 888
BpuMI CCSGG 6 cut(s) 296, 428, 470, 501, 837, 1040
BsaAI YACGTR 3 cut(s) 263, 418, 444
BsaHI GRCGYC 1 cut(s) 315
BsaI GGTCTC 1 cut(s) 281
BsaJI CCNNGG 8 cut(s) 116, 138, 175, 223, 725, 755, 800, 941
BsaWI WCCGGW 1 cut(s) 815
BsaXI ACNNNNNCTCC 2 cut(s) 1138, 1168
Bsc4I CCNNNNNNNGG 7 cut(s) 223, 500, 519, 566, 761, 947, 1028
Bse118I RCCGGY 3 cut(s) 815, 1047, 1056
Bse1I ACTGG 6 cut(s) 202, 671, 775, 790, 999, 1141
BseBI CCWGG 4 cut(s) 155, 224, 488, 617
BseDI CCNNGG 8 cut(s) 116, 138, 175, 223, 725, 755, 800, 941
BseGI GGATG 3 cut(s) 95, 171, 589
BseLI CCNNNNNNNGG 7 cut(s) 223, 500, 519, 566, 761, 947, 1028
BseMII CTCAG 6 cut(s) 52, 71, 101, 120, 902, 1041
BseNI ACTGG 6 cut(s) 202, 671, 775, 790, 999, 1141
BseXI GCAGC 2 cut(s) 378, 435
BseYI CCCAGC 1 cut(s) 947
Bsh1285I CGRYCG 1 cut(s) 816
BshFI GGCC 4 cut(s) 115, 137, 570, 905
BshTI ACCGGT 1 cut(s) 815
BsiEI CGRYCG 1 cut(s) 816
BsiHKAI GWGCWC 1 cut(s) 889
BsiSI CCGG 9 cut(s) 296, 428, 470, 500, 816, 837, 1039, 1048, 1057
BslI CCNNNNNNNGG 7 cut(s) 223, 500, 519, 566, 761, 947, 1028
BsmAI GTCTC 1 cut(s) 281
BsmI GAATGC 2 cut(s) 356, 935
BsnI GGCC 4 cut(s) 115, 137, 570, 905
Bso31I GGTCTC 1 cut(s) 281
Bsp1286I GDGCHC 5 cut(s) 270, 327, 513, 889, 998
Bsp143I GATC 7 cut(s) 63, 399, 412, 640, 764, 1031, 1237
Bsp1720I GCTNAGC 2 cut(s) 38, 888
BspANI GGCC 4 cut(s) 115, 137, 570, 905
BspCNI CTCAG 6 cut(s) 51, 70, 100, 119, 901, 1040
BspHI TCATGA 1 cut(s) 894
BspLI GGNNCC 4 cut(s) 326, 492, 706, 1112
BspPI GGATC 3 cut(s) 394, 772, 1039
BspQI GCTCTTC 1 cut(s) 501
BspTNI GGTCTC 1 cut(s) 281
BsrBI CCGCTC 1 cut(s) 1012
BsrFI RCCGGY 3 cut(s) 815, 1047, 1056
BsrI ACTGG 6 cut(s) 202, 671, 775, 790, 999, 1141
BssAI RCCGGY 3 cut(s) 815, 1047, 1056
BssECI CCNNGG 8 cut(s) 116, 138, 175, 223, 725, 755, 800, 941
BssMI GATC 7 cut(s) 63, 399, 412, 640, 764, 1031, 1237
BssNI GRCGYC 1 cut(s) 315
BssT1I CCWWGG 3 cut(s) 725, 800, 941
Bst2UI CCWGG 4 cut(s) 155, 224, 488, 617
Bst4CI ACNGT 6 cut(s) 580, 1100, 1150, 1179, 1196, 1212
Bst6I CTCTTC 1 cut(s) 501
BstACI GRCGYC 1 cut(s) 315
BstBAI YACGTR 3 cut(s) 263, 418, 444
BstC8I GCNNGC 4 cut(s) 113, 568, 983, 1045
BstDEI CTNAG 7 cut(s) 38, 57, 87, 106, 888, 968, 1027
BstDSI CCRYGG 1 cut(s) 138
BstENI CCTNNNNNAGG 1 cut(s) 564
BstF5I GGATG 3 cut(s) 95, 171, 589
BstHHI GCGC 3 cut(s) 209, 244, 356
BstKTI GATC 7 cut(s) 66, 402, 415, 643, 767, 1034, 1240
BstMAI GTCTC 1 cut(s) 281
BstMBI GATC 7 cut(s) 63, 399, 412, 640, 764, 1031, 1237
BstMCI CGRYCG 1 cut(s) 816
BstMWI GCNNNNNNNGC 7 cut(s) 26, 77, 360, 474, 598, 924, 1053
BstNI CCWGG 4 cut(s) 155, 224, 488, 617
BstNSI RCATGY 1 cut(s) 233
BstV1I GCAGC 2 cut(s) 378, 435
BstV2I GAAGAC 1 cut(s) 157
BsuRI GGCC 4 cut(s) 115, 137, 570, 905
BtgI CCRYGG 1 cut(s) 138
BtrI CACGTC 1 cut(s) 1132
BtsCI GGATG 3 cut(s) 95, 171, 589
BtsIMutI CAGTG 3 cut(s) 209, 678, 783
Cac8I GCNNGC 4 cut(s) 113, 568, 983, 1045
CciI TCATGA 1 cut(s) 894
CfoI GCGC 3 cut(s) 209, 244, 356
Cfr10I RCCGGY 3 cut(s) 815, 1047, 1056
Cfr13I GGNCC 5 cut(s) 113, 151, 235, 569, 719
CseI GACGC 1 cut(s) 43
CsiI ACCWGGT 1 cut(s) 486
Csp6I GTAC 3 cut(s) 576, 881, 954
CspAI ACCGGT 1 cut(s) 815
CspCI CAANNNNNGTGG 2 cut(s) 413, 448
CviAII CATG 4 cut(s) 14, 230, 256, 895
CviQI GTAC 3 cut(s) 576, 881, 954
DdeI CTNAG 7 cut(s) 38, 57, 87, 106, 888, 968, 1027
DpnI GATC 7 cut(s) 65, 401, 414, 642, 766, 1033, 1239
DpnII GATC 7 cut(s) 63, 399, 412, 640, 764, 1031, 1237
DrdI GACNNNNNNGTC 2 cut(s) 278, 1141
DseDI GACNNNNNNGTC 2 cut(s) 278, 1141
EaeI YGGCCR 1 cut(s) 135
Eam1104I CTCTTC 1 cut(s) 501
EarI CTCTTC 1 cut(s) 501
Ecl136II GAGCTC 1 cut(s) 887
Eco130I CCWWGG 3 cut(s) 725, 800, 941
Eco24I GRGCYC 5 cut(s) 270, 327, 513, 889, 998
Eco31I GGTCTC 1 cut(s) 281
Eco32I GATATC 1 cut(s) 544
Eco47I GGWCC 3 cut(s) 151, 235, 719
Eco53kI GAGCTC 1 cut(s) 887
Eco72I CACGTG 3 cut(s) 263, 418, 444
EcoICRI GAGCTC 1 cut(s) 887
EcoNI CCTNNNNNAGG 1 cut(s) 564
EcoRII CCWGG 4 cut(s) 153, 222, 486, 615
EcoRV GATATC 1 cut(s) 544
EcoT14I CCWWGG 3 cut(s) 725, 800, 941
EcoT38I GRGCYC 5 cut(s) 270, 327, 513, 889, 998
ErhI CCWWGG 3 cut(s) 725, 800, 941
FaeI CATG 4 cut(s) 17, 233, 259, 898
FaiI YATR 8 cut(s) 15, 231, 257, 603, 605, 896, 1008, 1188
FatI CATG 4 cut(s) 13, 229, 255, 894
FauI CCCGC 5 cut(s) 104, 206, 224, 283, 620
FauNDI CATATG 1 cut(s) 603
FblI GTMKAC 2 cut(s) 192, 1145
Fnu4HI GCNGC 3 cut(s) 18, 392, 449
FokI GGATG 3 cut(s) 82, 158, 596
FriOI GRGCYC 5 cut(s) 270, 327, 513, 889, 998
Fsp4HI GCNGC 3 cut(s) 18, 392, 449
FspBI CTAG 1 cut(s) 726
GlaI GCGC 3 cut(s) 208, 243, 355
GluI GCNGC 3 cut(s) 18, 392, 449
GsaI CCCAGC 1 cut(s) 951
GsuI CTGGAG 2 cut(s) 206, 311
HaeIII GGCC 4 cut(s) 115, 137, 570, 905
HapII CCGG 9 cut(s) 296, 428, 470, 500, 816, 837, 1039, 1048, 1057
HgaI GACGC 1 cut(s) 43
HhaI GCGC 3 cut(s) 209, 244, 356
Hin1I GRCGYC 1 cut(s) 315
Hin1II CATG 4 cut(s) 17, 233, 259, 898
Hin6I GCGC 3 cut(s) 207, 242, 354
HinP1I GCGC 3 cut(s) 207, 242, 354
HincII GTYRAC 5 cut(s) 526, 557, 738, 1146, 1215
HindII GTYRAC 5 cut(s) 526, 557, 738, 1146, 1215
HinfI GANTC 6 cut(s) 341, 548, 659, 780, 910, 1163
HpaII CCGG 9 cut(s) 296, 428, 470, 500, 816, 837, 1039, 1048, 1057
HphI GGTGA 3 cut(s) 154, 700, 1208
Hpy188I TCNGA 3 cut(s) 313, 1095, 1162
Hpy188III TCNNGA 8 cut(s) 130, 286, 377, 762, 850, 895, 1029, 1069
Hpy99I CGWCG 4 cut(s) 164, 317, 851, 1196
HpyAV CCTTC 2 cut(s) 301, 695
HpyCH4III ACNGT 6 cut(s) 580, 1100, 1150, 1179, 1196, 1212
HpyCH4IV ACGT 7 cut(s) 262, 315, 417, 443, 846, 930, 1131
HpyCH4V TGCA 1 cut(s) 566
HpyF10VI GCNNNNNNNGC 7 cut(s) 26, 77, 360, 474, 598, 924, 1053
HpyF3I CTNAG 7 cut(s) 38, 57, 87, 106, 888, 968, 1027
HpySE526I ACGT 7 cut(s) 262, 315, 417, 443, 846, 930, 1131
Hsp92I GRCGYC 1 cut(s) 315
Hsp92II CATG 4 cut(s) 17, 233, 259, 898
HspAI GCGC 3 cut(s) 207, 242, 354
Kzo9I GATC 7 cut(s) 63, 399, 412, 640, 764, 1031, 1237
LguI GCTCTTC 1 cut(s) 501
LmnI GCTCC 3 cut(s) 249, 330, 1159
Lsp1109I GCAGC 2 cut(s) 378, 435
LweI GCATC 3 cut(s) 553, 1065, 1210
MabI ACCWGGT 1 cut(s) 486
MaeI CTAG 1 cut(s) 726
MaeII ACGT 7 cut(s) 262, 315, 417, 443, 846, 930, 1131
MaeIII GTNAC 3 cut(s) 804, 818, 1132
MalI GATC 7 cut(s) 65, 401, 414, 642, 766, 1033, 1239
MbiI CCGCTC 1 cut(s) 1012
MboI GATC 7 cut(s) 63, 399, 412, 640, 764, 1031, 1237
MboII GAAGA 6 cut(s) 157, 160, 518, 650, 668, 1180
MhlI GDGCHC 5 cut(s) 270, 327, 513, 889, 998
MluCI AATT 2 cut(s) 682, 1116
MlyI GAGTC 1 cut(s) 335
MmeI TCCRAC 2 cut(s) 123, 336
MseI TTAA 3 cut(s) 365, 681, 1246
MslI CAYNNNNRTG 1 cut(s) 131
MspI CCGG 9 cut(s) 296, 428, 470, 500, 816, 837, 1039, 1048, 1057
Mva1269I GAATGC 2 cut(s) 356, 935
MvaI CCWGG 4 cut(s) 155, 224, 488, 617
MwoI GCNNNNNNNGC 7 cut(s) 26, 77, 360, 474, 598, 924, 1053
NciI CCSGG 6 cut(s) 296, 428, 470, 501, 837, 1040
NdeI CATATG 1 cut(s) 603
NdeII GATC 7 cut(s) 63, 399, 412, 640, 764, 1031, 1237
NlaIII CATG 4 cut(s) 17, 233, 259, 898
NlaIV GGNNCC 4 cut(s) 326, 492, 706, 1112
NmeAIII GCCGAG 6 cut(s) 141, 156, 312, 503, 780, 881
NmuCI GTSAC 3 cut(s) 804, 818, 1132
NspI RCATGY 1 cut(s) 233
PagI TCATGA 1 cut(s) 894
PciSI GCTCTTC 1 cut(s) 501
PcsI WCGNNNNNNNCGW 2 cut(s) 276, 354
PctI GAATGC 2 cut(s) 356, 935
PfeI GAWTC 5 cut(s) 548, 659, 780, 910, 1163
PflMI CCANNNNNTGG 1 cut(s) 947
PinAI ACCGGT 1 cut(s) 815
PkrI GCNGC 3 cut(s) 19, 393, 450
PleI GAGTC 1 cut(s) 335
PmaCI CACGTG 3 cut(s) 263, 418, 444
PmlI CACGTG 3 cut(s) 263, 418, 444
PpsI GAGTC 1 cut(s) 335
Ppu21I YACGTR 3 cut(s) 263, 418, 444
PshBI ATTAAT 1 cut(s) 681
Psp124BI GAGCTC 1 cut(s) 889
Psp6I CCWGG 4 cut(s) 153, 222, 486, 615
PspCI CACGTG 3 cut(s) 263, 418, 444
PspFI CCCAGC 1 cut(s) 947
PspGI CCWGG 4 cut(s) 153, 222, 486, 615
PspN4I GGNNCC 4 cut(s) 326, 492, 706, 1112
PspPI GGNCC 5 cut(s) 113, 151, 235, 569, 719
PsrI GAACNNNNNNTAC 2 cut(s) 998, 1030
RsaI GTAC 3 cut(s) 577, 882, 955
RsaNI GTAC 3 cut(s) 576, 881, 954
RseI CAYNNNNRTG 1 cut(s) 131
SacI GAGCTC 1 cut(s) 889
SalI GTCGAC 1 cut(s) 1144
SapI GCTCTTC 1 cut(s) 501
SaqAI TTAA 3 cut(s) 365, 681, 1246
SatI GCNGC 3 cut(s) 18, 392, 449
Sau3AI GATC 7 cut(s) 63, 399, 412, 640, 764, 1031, 1237
Sau96I GGNCC 5 cut(s) 113, 151, 235, 569, 719
SchI GAGTC 1 cut(s) 335
SduI GDGCHC 5 cut(s) 270, 327, 513, 889, 998
SexAI ACCWGGT 1 cut(s) 486
SfaNI GCATC 3 cut(s) 553, 1065, 1210
SinI GGWCC 3 cut(s) 151, 235, 719
SmiMI CAYNNNNRTG 1 cut(s) 131
Sse9I AATT 2 cut(s) 682, 1116
SspI AATATT 1 cut(s) 792
SspMI CTAG 1 cut(s) 726
SstI GAGCTC 1 cut(s) 889
StyI CCWWGG 3 cut(s) 725, 800, 941
TaaI ACNGT 6 cut(s) 580, 1100, 1150, 1179, 1196, 1212
TaiI ACGT 7 cut(s) 265, 318, 420, 446, 849, 933, 1134
TasI AATT 2 cut(s) 682, 1116
TatI WGTACW 2 cut(s) 575, 953
TauI GCSGC 1 cut(s) 20
TfiI GAWTC 5 cut(s) 548, 659, 780, 910, 1163
Tru1I TTAA 3 cut(s) 365, 681, 1246
Tru9I TTAA 3 cut(s) 365, 681, 1246
TscAI CASTG 3 cut(s) 209, 678, 790
TseFI GTSAC 3 cut(s) 804, 818, 1132
TseI GCWGC 2 cut(s) 391, 448
Tsp45I GTSAC 3 cut(s) 804, 818, 1132
TspDTI ATGAA 4 cut(s) 160, 600, 911, 1221
TspGWI ACGGA 1 cut(s) 178
TspRI CASTG 3 cut(s) 209, 678, 790
Van91I CCANNNNNTGG 1 cut(s) 947
VpaK11BI GGWCC 3 cut(s) 151, 235, 719
VspI ATTAAT 1 cut(s) 681
XagI CCTNNNNNAGG 1 cut(s) 564
XceI RCATGY 1 cut(s) 233
XmaJI CCTAGG 1 cut(s) 725
XmiI GTMKAC 2 cut(s) 192, 1145
XspI CTAG 1 cut(s) 726
ZraI GACGTC 1 cut(s) 316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.