RING-H2 finger protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G35330 AT2G34990 AT2G34990 AT2G35000 |
| fragaria_vesca | FvH4_5g36230 |
| malus_domestica | MD08G1190600.v1.1 MD15G1377900.v1.1 |
| prunus_persica | Prupe.1G524600_v2.0.a1 |
| pyrus_communis | pycom08g16380 pycom15g33890 |
| rosa_chinensis | RchiOBHm_Chr7g0238061 |
| rosa_laevigata | RLG00000000944 |
| rosa_multiflora | Rmu_co8161516.1_g000001 Rmu_sc0002586.1_g000017 Rmu_sc0024940.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00223410 |
| rosa_rugosa | Rorug07G0310300.1 |
| rosa_samantha | Rh7AG465500 Rh7BG436500 Rh7CG483800 Rh7DG452200 |
| rosa_wichuraiana | Rw7G038560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 275 |
| AatII | GACGTC | 1 cut(s) | 600 |
| Acc36I | ACCTGC | 1 cut(s) | 470 |
| AccB1I | GGYRCC | 2 cut(s) | 109, 1094 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 826 |
| AccI | GTMKAC | 3 cut(s) | 710, 737, 1190 |
| AccII | CGCG | 8 cut(s) | 228, 239, 241, 261, 353, 785, 987, 1027 |
| AclWI | GGATC | 2 cut(s) | 627, 668 |
| AcoI | YGGCCR | 2 cut(s) | 678, 817 |
| AcsI | RAATTY | 1 cut(s) | 116 |
| AcvI | CACGTG | 2 cut(s) | 441, 917 |
| AcyI | GRCGYC | 2 cut(s) | 110, 597 |
| AfaI | GTAC | 3 cut(s) | 512, 885, 928 |
| AfeI | AGCGCT | 1 cut(s) | 517 |
| AflIII | ACRYGT | 3 cut(s) | 212, 438, 914 |
| AgeI | ACCGGT | 2 cut(s) | 1008, 1035 |
| AgsI | TTSAA | 3 cut(s) | 19, 347, 364 |
| AjiI | CACGTC | 3 cut(s) | 215, 313, 415 |
| AjnI | CCWGG | 4 cut(s) | 150, 372, 496, 1090 |
| AluBI | AGCT | 3 cut(s) | 529, 586, 890 |
| AluI | AGCT | 3 cut(s) | 529, 586, 890 |
| Alw26I | GTCTC | 4 cut(s) | 221, 278, 604, 1074 |
| AlwI | GGATC | 2 cut(s) | 627, 668 |
| Ama87I | CYCGRG | 2 cut(s) | 591, 799 |
| Aor51HI | AGCGCT | 1 cut(s) | 517 |
| AoxI | GGCC | 5 cut(s) | 262, 678, 722, 748, 817 |
| ApeKI | GCWGC | 4 cut(s) | 61, 388, 572, 586 |
| ApoI | RAATTY | 1 cut(s) | 116 |
| AseI | ATTAAT | 1 cut(s) | 654 |
| AsiGI | ACCGGT | 2 cut(s) | 1008, 1035 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 368 |
| AspA2I | CCTAGG | 1 cut(s) | 725 |
| AspLEI | GCGC | 8 cut(s) | 112, 206, 230, 241, 249, 353, 518, 987 |
| AspS9I | GGNCC | 5 cut(s) | 95, 722, 749, 765, 832 |
| AsuC2I | CCSGG | 5 cut(s) | 467, 592, 593, 715, 840 |
| AsuHPI | GGTGA | 4 cut(s) | 61, 184, 854, 1143 |
| AvaI | CYCGRG | 2 cut(s) | 591, 799 |
| AvaII | GGWCC | 3 cut(s) | 95, 765, 832 |
| AvrII | CCTAGG | 1 cut(s) | 725 |
| BanI | GGYRCC | 2 cut(s) | 109, 1094 |
| BanII | GRGCYC | 1 cut(s) | 324 |
| BbrPI | CACGTG | 2 cut(s) | 441, 917 |
| BbsI | GAAGAC | 2 cut(s) | 181, 409 |
| BbvI | GCAGC | 4 cut(s) | 73, 375, 559, 573 |
| BccI | CCATC | 4 cut(s) | 31, 124, 247, 517 |
| BceAI | ACGGC | 4 cut(s) | 260, 459, 493, 1220 |
| BciT130I | CCWGG | 4 cut(s) | 152, 374, 498, 1092 |
| BclI | TGATCA | 1 cut(s) | 660 |
| BcnI | CCSGG | 5 cut(s) | 467, 592, 593, 715, 840 |
| BcoDI | GTCTC | 4 cut(s) | 221, 278, 604, 1074 |
| BfaI | CTAG | 3 cut(s) | 726, 891, 930 |
| BfmI | CTRYAG | 1 cut(s) | 967 |
| BfoI | RGCGCY | 2 cut(s) | 113, 519 |
| BfuAI | ACCTGC | 1 cut(s) | 470 |
| BisI | GCNGC | 7 cut(s) | 62, 262, 389, 573, 587, 776, 1058 |
| BlnI | CCTAGG | 1 cut(s) | 725 |
| BlsI | GCNGC | 7 cut(s) | 63, 263, 390, 574, 588, 777, 1059 |
| BmcAI | AGTACT | 1 cut(s) | 928 |
| Bme1390I | CCNGG | 9 cut(s) | 152, 374, 467, 498, 592, 593, 715, 840, 1092 |
| Bme18I | GGWCC | 3 cut(s) | 95, 765, 832 |
| BmeT110I | CYCGRG | 2 cut(s) | 591, 799 |
| BmgBI | CACGTC | 3 cut(s) | 215, 313, 415 |
| BmgT120I | GGNCC | 5 cut(s) | 95, 722, 749, 765, 832 |
| BmiI | GGNNCC | 7 cut(s) | 111, 323, 489, 507, 766, 1096, 1140 |
| BmrFI | CCNGG | 9 cut(s) | 152, 374, 467, 498, 592, 593, 715, 840, 1092 |
| BmrI | ACTGGG | 1 cut(s) | 780 |
| BmsI | GCATC | 2 cut(s) | 441, 1044 |
| BmuI | ACTGGG | 1 cut(s) | 780 |
| BpiI | GAAGAC | 2 cut(s) | 181, 409 |
| BpuMI | CCSGG | 5 cut(s) | 467, 592, 593, 715, 840 |
| BsaAI | YACGTR | 2 cut(s) | 441, 917 |
| BsaBI | GATNNNNATC | 1 cut(s) | 41 |
| BsaHI | GRCGYC | 2 cut(s) | 110, 597 |
| BsaJI | CCNNGG | 7 cut(s) | 328, 590, 591, 698, 725, 800, 941 |
| BsaWI | WCCGGW | 3 cut(s) | 92, 1008, 1035 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 964, 994 |
| Bse118I | RCCGGY | 3 cut(s) | 815, 1008, 1035 |
| Bse1I | ACTGG | 1 cut(s) | 775 |
| Bse8I | GATNNNNATC | 1 cut(s) | 41 |
| BseBI | CCWGG | 4 cut(s) | 152, 374, 498, 1092 |
| BseDI | CCNNGG | 7 cut(s) | 328, 590, 591, 698, 725, 800, 941 |
| BseGI | GGATG | 1 cut(s) | 42 |
| BseJI | GATNNNNATC | 1 cut(s) | 41 |
| BseMII | CTCAG | 1 cut(s) | 221 |
| BseNI | ACTGG | 1 cut(s) | 775 |
| BseRI | GAGGAG | 4 cut(s) | 41, 44, 518, 893 |
| BseXI | GCAGC | 4 cut(s) | 73, 375, 559, 573 |
| Bsh1236I | CGCG | 8 cut(s) | 228, 239, 241, 261, 353, 785, 987, 1027 |
| Bsh1285I | CGRYCG | 4 cut(s) | 714, 1031, 1076, 1194 |
| BshFI | GGCC | 5 cut(s) | 264, 680, 724, 750, 819 |
| BshNI | GGYRCC | 2 cut(s) | 109, 1094 |
| BshTI | ACCGGT | 2 cut(s) | 1008, 1035 |
| BsiEI | CGRYCG | 4 cut(s) | 714, 1031, 1076, 1194 |
| BsiHKCI | CYCGRG | 2 cut(s) | 591, 799 |
| BslFI | GGGAC | 1 cut(s) | 608 |
| BsmAI | GTCTC | 4 cut(s) | 221, 278, 604, 1074 |
| BsmBI | CGTCTC | 2 cut(s) | 221, 604 |
| BsmFI | GGGAC | 1 cut(s) | 608 |
| BsmI | GAATGC | 1 cut(s) | 353 |
| BsnI | GGCC | 5 cut(s) | 264, 680, 724, 750, 819 |
| BsoBI | CYCGRG | 2 cut(s) | 591, 799 |
| Bsp1286I | GDGCHC | 1 cut(s) | 324 |
| Bsp143I | GATC | 6 cut(s) | 66, 144, 619, 660, 673, 758 |
| BspANI | GGCC | 5 cut(s) | 264, 680, 724, 750, 819 |
| BspCNI | CTCAG | 1 cut(s) | 220 |
| BspFNI | CGCG | 8 cut(s) | 228, 239, 241, 261, 353, 785, 987, 1027 |
| BspHI | TCATGA | 1 cut(s) | 141 |
| BspLI | GGNNCC | 7 cut(s) | 111, 323, 489, 507, 766, 1096, 1140 |
| BspMI | ACCTGC | 1 cut(s) | 470 |
| BspPI | GGATC | 2 cut(s) | 627, 668 |
| BspT107I | GGYRCC | 2 cut(s) | 109, 1094 |
| BsrFI | RCCGGY | 3 cut(s) | 815, 1008, 1035 |
| BsrI | ACTGG | 1 cut(s) | 775 |
| BssAI | RCCGGY | 3 cut(s) | 815, 1008, 1035 |
| BssECI | CCNNGG | 7 cut(s) | 328, 590, 591, 698, 725, 800, 941 |
| BssMI | GATC | 6 cut(s) | 66, 144, 619, 660, 673, 758 |
| BssNI | GRCGYC | 2 cut(s) | 110, 597 |
| BssT1I | CCWWGG | 4 cut(s) | 328, 698, 725, 941 |
| Bst2UI | CCWGG | 4 cut(s) | 152, 374, 498, 1092 |
| Bst4CI | ACNGT | 2 cut(s) | 870, 1126 |
| Bst6I | CTCTTC | 2 cut(s) | 627, 1176 |
| BstACI | GRCGYC | 2 cut(s) | 110, 597 |
| BstBAI | YACGTR | 2 cut(s) | 441, 917 |
| BstC8I | GCNNGC | 1 cut(s) | 259 |
| BstDEI | CTNAG | 2 cut(s) | 10, 207 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 332 |
| BstF5I | GGATG | 1 cut(s) | 42 |
| BstFNI | CGCG | 8 cut(s) | 228, 239, 241, 261, 353, 785, 987, 1027 |
| BstH2I | RGCGCY | 2 cut(s) | 113, 519 |
| BstHHI | GCGC | 8 cut(s) | 112, 206, 230, 241, 249, 353, 518, 987 |
| BstKTI | GATC | 6 cut(s) | 69, 147, 622, 663, 676, 761 |
| BstMAI | GTCTC | 4 cut(s) | 221, 278, 604, 1074 |
| BstMBI | GATC | 6 cut(s) | 66, 144, 619, 660, 673, 758 |
| BstMCI | CGRYCG | 4 cut(s) | 714, 1031, 1076, 1194 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 227, 236, 357, 471, 535 |
| BstNI | CCWGG | 4 cut(s) | 152, 374, 498, 1092 |
| BstSCI | CCNGG | 9 cut(s) | 150, 372, 465, 496, 590, 591, 713, 838, 1090 |
| BstSFI | CTRYAG | 1 cut(s) | 967 |
| BstUI | CGCG | 8 cut(s) | 228, 239, 241, 261, 353, 785, 987, 1027 |
| BstV1I | GCAGC | 4 cut(s) | 73, 375, 559, 573 |
| BstV2I | GAAGAC | 2 cut(s) | 181, 409 |
| BsuRI | GGCC | 5 cut(s) | 264, 680, 724, 750, 819 |
| BtgZI | GCGATG | 1 cut(s) | 1119 |
| BtrI | CACGTC | 3 cut(s) | 215, 313, 415 |
| BtsCI | GGATG | 1 cut(s) | 42 |
| BtsI | GCAGTG | 1 cut(s) | 1137 |
| BtsIMutI | CAGTG | 3 cut(s) | 670, 768, 1137 |
| BveI | ACCTGC | 1 cut(s) | 470 |
| Cac8I | GCNNGC | 1 cut(s) | 259 |
| CciI | TCATGA | 1 cut(s) | 141 |
| CfoI | GCGC | 8 cut(s) | 112, 206, 230, 241, 249, 353, 518, 987 |
| Cfr10I | RCCGGY | 3 cut(s) | 815, 1008, 1035 |
| Cfr13I | GGNCC | 5 cut(s) | 95, 722, 749, 765, 832 |
| Cfr9I | CCCGGG | 1 cut(s) | 591 |
| CseI | GACGC | 1 cut(s) | 234 |
| CsiI | ACCWGGT | 1 cut(s) | 1090 |
| Csp6I | GTAC | 3 cut(s) | 511, 884, 927 |
| CspAI | ACCGGT | 2 cut(s) | 1008, 1035 |
| CviAII | CATG | 3 cut(s) | 142, 250, 904 |
| CviQI | GTAC | 3 cut(s) | 511, 884, 927 |
| DdeI | CTNAG | 2 cut(s) | 10, 207 |
| DinI | GGCGCC | 1 cut(s) | 111 |
| DpnI | GATC | 6 cut(s) | 68, 146, 621, 662, 675, 760 |
| DpnII | GATC | 6 cut(s) | 66, 144, 619, 660, 673, 758 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 275 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 275 |
| EaeI | YGGCCR | 2 cut(s) | 678, 817 |
| Eam1104I | CTCTTC | 2 cut(s) | 627, 1176 |
| EarI | CTCTTC | 2 cut(s) | 627, 1176 |
| Eco130I | CCWWGG | 4 cut(s) | 328, 698, 725, 941 |
| Eco24I | GRGCYC | 1 cut(s) | 324 |
| Eco32I | GATATC | 1 cut(s) | 124 |
| Eco47I | GGWCC | 3 cut(s) | 95, 765, 832 |
| Eco47III | AGCGCT | 1 cut(s) | 517 |
| Eco72I | CACGTG | 2 cut(s) | 441, 917 |
| Eco88I | CYCGRG | 2 cut(s) | 591, 799 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 332 |
| EcoRII | CCWGG | 4 cut(s) | 150, 372, 496, 1090 |
| EcoRV | GATATC | 1 cut(s) | 124 |
| EcoT14I | CCWWGG | 4 cut(s) | 328, 698, 725, 941 |
| EcoT38I | GRGCYC | 1 cut(s) | 324 |
| EgeI | GGCGCC | 1 cut(s) | 111 |
| EheI | GGCGCC | 1 cut(s) | 111 |
| ErhI | CCWWGG | 4 cut(s) | 328, 698, 725, 941 |
| Esp3I | CGTCTC | 2 cut(s) | 221, 604 |
| FaeI | CATG | 3 cut(s) | 145, 253, 907 |
| FaiI | YATR | 7 cut(s) | 24, 143, 251, 358, 905, 969, 1005 |
| FaqI | GGGAC | 1 cut(s) | 608 |
| FatI | CATG | 3 cut(s) | 141, 249, 903 |
| FauI | CCCGC | 5 cut(s) | 203, 301, 538, 778, 940 |
| FbaI | TGATCA | 1 cut(s) | 660 |
| FblI | GTMKAC | 3 cut(s) | 710, 737, 1190 |
| Fnu4HI | GCNGC | 7 cut(s) | 62, 262, 389, 573, 587, 776, 1058 |
| FokI | GGATG | 1 cut(s) | 49 |
| FriOI | GRGCYC | 1 cut(s) | 324 |
| Fsp4HI | GCNGC | 7 cut(s) | 62, 262, 389, 573, 587, 776, 1058 |
| FspBI | CTAG | 3 cut(s) | 726, 891, 930 |
| GlaI | GCGC | 8 cut(s) | 111, 205, 229, 240, 248, 352, 517, 986 |
| GluI | GCNGC | 7 cut(s) | 62, 262, 389, 573, 587, 776, 1058 |
| HaeII | RGCGCY | 2 cut(s) | 113, 519 |
| HaeIII | GGCC | 5 cut(s) | 264, 680, 724, 750, 819 |
| HgaI | GACGC | 1 cut(s) | 234 |
| HhaI | GCGC | 8 cut(s) | 112, 206, 230, 241, 249, 353, 518, 987 |
| Hin1I | GRCGYC | 2 cut(s) | 110, 597 |
| Hin1II | CATG | 3 cut(s) | 145, 253, 907 |
| Hin6I | GCGC | 8 cut(s) | 110, 204, 228, 239, 247, 351, 516, 985 |
| HinP1I | GCGC | 8 cut(s) | 110, 204, 228, 239, 247, 351, 516, 985 |
| HincII | GTYRAC | 5 cut(s) | 551, 711, 738, 912, 1191 |
| HindII | GTYRAC | 5 cut(s) | 551, 711, 738, 912, 1191 |
| HinfI | GANTC | 4 cut(s) | 6, 338, 578, 780 |
| HphI | GGTGA | 4 cut(s) | 61, 184, 854, 1143 |
| Hpy166II | GTNNAC | 8 cut(s) | 551, 711, 738, 768, 813, 861, 912, 1191 |
| Hpy188I | TCNGA | 5 cut(s) | 210, 310, 522, 624, 756 |
| Hpy188III | TCNNGA | 5 cut(s) | 34, 127, 142, 283, 799 |
| Hpy8I | GTNNAC | 8 cut(s) | 551, 711, 738, 768, 813, 861, 912, 1191 |
| Hpy99I | CGWCG | 2 cut(s) | 314, 742 |
| HpyAV | CCTTC | 3 cut(s) | 307, 310, 632 |
| HpyCH4III | ACNGT | 2 cut(s) | 870, 1126 |
| HpyCH4IV | ACGT | 6 cut(s) | 214, 312, 414, 440, 597, 916 |
| HpyCH4V | TGCA | 1 cut(s) | 432 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 227, 236, 357, 471, 535 |
| HpyF3I | CTNAG | 2 cut(s) | 10, 207 |
| HpySE526I | ACGT | 6 cut(s) | 214, 312, 414, 440, 597, 916 |
| Hsp92I | GRCGYC | 2 cut(s) | 110, 597 |
| Hsp92II | CATG | 3 cut(s) | 145, 253, 907 |
| HspAI | GCGC | 8 cut(s) | 110, 204, 228, 239, 247, 351, 516, 985 |
| KasI | GGCGCC | 1 cut(s) | 109 |
| Ksp22I | TGATCA | 1 cut(s) | 660 |
| Kzo9I | GATC | 6 cut(s) | 66, 144, 619, 660, 673, 758 |
| LmnI | GCTCC | 4 cut(s) | 327, 505, 526, 1138 |
| Lsp1109I | GCAGC | 4 cut(s) | 73, 375, 559, 573 |
| LweI | GCATC | 2 cut(s) | 441, 1044 |
| MabI | ACCWGGT | 1 cut(s) | 1090 |
| MaeI | CTAG | 3 cut(s) | 726, 891, 930 |
| MaeII | ACGT | 6 cut(s) | 214, 312, 414, 440, 597, 916 |
| MaeIII | GTNAC | 2 cut(s) | 1149, 1200 |
| MalI | GATC | 6 cut(s) | 68, 146, 621, 662, 675, 760 |
| MboI | GATC | 6 cut(s) | 66, 144, 619, 660, 673, 758 |
| MboII | GAAGA | 7 cut(s) | 37, 96, 181, 409, 644, 1006, 1193 |
| MhlI | GDGCHC | 1 cut(s) | 324 |
| MluCI | AATT | 2 cut(s) | 116, 655 |
| Mly113I | GGCGCC | 1 cut(s) | 110 |
| MlyI | GAGTC | 1 cut(s) | 332 |
| MmeI | TCCRAC | 1 cut(s) | 333 |
| MroXI | GAANNNNTTC | 1 cut(s) | 368 |
| MseI | TTAA | 5 cut(s) | 395, 627, 654, 669, 1222 |
| MspR9I | CCNGG | 9 cut(s) | 152, 374, 467, 498, 592, 593, 715, 840, 1092 |
| Mva1269I | GAATGC | 1 cut(s) | 353 |
| MvaI | CCWGG | 4 cut(s) | 152, 374, 498, 1092 |
| MvnI | CGCG | 8 cut(s) | 228, 239, 241, 261, 353, 785, 987, 1027 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 227, 236, 357, 471, 535 |
| NarI | GGCGCC | 1 cut(s) | 110 |
| NciI | CCSGG | 5 cut(s) | 467, 592, 593, 715, 840 |
| NdeII | GATC | 6 cut(s) | 66, 144, 619, 660, 673, 758 |
| NlaIII | CATG | 3 cut(s) | 145, 253, 907 |
| NlaIV | GGNNCC | 7 cut(s) | 111, 323, 489, 507, 766, 1096, 1140 |
| NmuCI | GTSAC | 1 cut(s) | 1149 |
| PagI | TCATGA | 1 cut(s) | 141 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 273 |
| PctI | GAATGC | 1 cut(s) | 353 |
| PdmI | GAANNNNTTC | 1 cut(s) | 368 |
| PfeI | GAWTC | 3 cut(s) | 6, 578, 780 |
| PflFI | GACNNNGTC | 1 cut(s) | 413 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 826 |
| PfoI | TCCNGGA | 1 cut(s) | 372 |
| PinAI | ACCGGT | 2 cut(s) | 1008, 1035 |
| PkrI | GCNGC | 7 cut(s) | 63, 263, 390, 574, 588, 777, 1059 |
| PleI | GAGTC | 1 cut(s) | 332 |
| PluTI | GGCGCC | 1 cut(s) | 113 |
| PmaCI | CACGTG | 2 cut(s) | 441, 917 |
| PmlI | CACGTG | 2 cut(s) | 441, 917 |
| PpsI | GAGTC | 1 cut(s) | 332 |
| Ppu21I | YACGTR | 2 cut(s) | 441, 917 |
| PshBI | ATTAAT | 1 cut(s) | 654 |
| Psp6I | CCWGG | 4 cut(s) | 150, 372, 496, 1090 |
| PspCI | CACGTG | 2 cut(s) | 441, 917 |
| PspGI | CCWGG | 4 cut(s) | 150, 372, 496, 1090 |
| PspN4I | GGNNCC | 7 cut(s) | 111, 323, 489, 507, 766, 1096, 1140 |
| PspPI | GGNCC | 5 cut(s) | 95, 722, 749, 765, 832 |
| PsyI | GACNNNGTC | 1 cut(s) | 413 |
| RsaI | GTAC | 3 cut(s) | 512, 885, 928 |
| RsaNI | GTAC | 3 cut(s) | 511, 884, 927 |
| SalI | GTCGAC | 3 cut(s) | 709, 736, 1189 |
| SaqAI | TTAA | 5 cut(s) | 395, 627, 654, 669, 1222 |
| SatI | GCNGC | 7 cut(s) | 62, 262, 389, 573, 587, 776, 1058 |
| Sau3AI | GATC | 6 cut(s) | 66, 144, 619, 660, 673, 758 |
| Sau96I | GGNCC | 5 cut(s) | 95, 722, 749, 765, 832 |
| ScaI | AGTACT | 1 cut(s) | 928 |
| SchI | GAGTC | 1 cut(s) | 332 |
| ScrFI | CCNGG | 9 cut(s) | 152, 374, 467, 498, 592, 593, 715, 840, 1092 |
| SduI | GDGCHC | 1 cut(s) | 324 |
| SexAI | ACCWGGT | 1 cut(s) | 1090 |
| SfaNI | GCATC | 2 cut(s) | 441, 1044 |
| SfcI | CTRYAG | 1 cut(s) | 967 |
| SfoI | GGCGCC | 1 cut(s) | 111 |
| SinI | GGWCC | 3 cut(s) | 95, 765, 832 |
| SmaI | CCCGGG | 1 cut(s) | 593 |
| Sse9I | AATT | 2 cut(s) | 116, 655 |
| SspDI | GGCGCC | 1 cut(s) | 109 |
| SspMI | CTAG | 3 cut(s) | 726, 891, 930 |
| StyD4I | CCNGG | 9 cut(s) | 150, 372, 465, 496, 590, 591, 713, 838, 1090 |
| StyI | CCWWGG | 4 cut(s) | 328, 698, 725, 941 |
| TaaI | ACNGT | 2 cut(s) | 870, 1126 |
| TaiI | ACGT | 6 cut(s) | 217, 315, 417, 443, 600, 919 |
| TaqII | GACCGA | 2 cut(s) | 1062, 1208 |
| TasI | AATT | 2 cut(s) | 116, 655 |
| TatI | WGTACW | 1 cut(s) | 926 |
| TauI | GCSGC | 3 cut(s) | 264, 778, 1060 |
| TfiI | GAWTC | 3 cut(s) | 6, 578, 780 |
| Tru1I | TTAA | 5 cut(s) | 395, 627, 654, 669, 1222 |
| Tru9I | TTAA | 5 cut(s) | 395, 627, 654, 669, 1222 |
| TscAI | CASTG | 3 cut(s) | 670, 775, 1137 |
| TseFI | GTSAC | 1 cut(s) | 1149 |
| TseI | GCWGC | 4 cut(s) | 61, 388, 572, 586 |
| Tsp45I | GTSAC | 1 cut(s) | 1149 |
| TspDTI | ATGAA | 3 cut(s) | 157, 396, 914 |
| TspGWI | ACGGA | 1 cut(s) | 175 |
| TspMI | CCCGGG | 1 cut(s) | 591 |
| TspRI | CASTG | 3 cut(s) | 670, 775, 1137 |
| Tth111I | GACNNNGTC | 1 cut(s) | 413 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 826 |
| VpaK11BI | GGWCC | 3 cut(s) | 95, 765, 832 |
| VspI | ATTAAT | 1 cut(s) | 654 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 332 |
| XapI | RAATTY | 1 cut(s) | 116 |
| XmaI | CCCGGG | 1 cut(s) | 591 |
| XmaJI | CCTAGG | 1 cut(s) | 725 |
| XmiI | GTMKAC | 3 cut(s) | 710, 737, 1190 |
| XmnI | GAANNNNTTC | 1 cut(s) | 368 |
| XspI | CTAG | 3 cut(s) | 726, 891, 930 |
| ZraI | GACGTC | 1 cut(s) | 598 |
| ZrmI | AGTACT | 1 cut(s) | 928 |