Prupe.1G541100_v2.0.a1

Belongs to the glutamyl-tRNA reductase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
44201401 .. 44204750
3350 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G541100.1

Sequence Viewer

Length: 1635 bp
ATGGCGGTGTCGACCAGTTTCGCCGGAGCAAAATTGGAGGCTCTGTTGTTGAAATCTTCTTCGTCGGCGGCGACAACGTCGTCGAGGGCCTCCAATGGTTCTTGCTCGTTGTCTGGGTCTTTGAGACCCGTCAGGAGCAGAAGGGCTGTGATTCAGAGGGGAGTGAGGTGCGAAGTGGCTGCTTCTGATGCTGCTGTCCAGACCGGTCAGAGTGTTTCCAATATTTCGGCTCTTGAGCAGCTCAAGACCTCTGCTGCTGATAGATATACAAAGGAAAGAAGCAGCATTGTGGTCATTGGGCTTAGTATTCACACAACACCTGTTGAAATGCGTGAAAAACTAGCCATCCCAGAAGCAGAATGGCCTCGAGCCATAGGGGAACTGTGTGGCTTAAATCATATAGAAGAAGCTGCTGTTCTCAGCACCTGCAACCGAATGGAGATATATGTTGTTGCTCTATCTCAGCATCGTGGTGTCAAAGAAGTGACTGAGTGGATGTCAAAGACAAGTGGGGTCCCTGTTTCTGAGCTATGCCAGCACCGGTTTTTGCTCTATAATAAAGATGCCACACAGCATCTCTTTGAAGTATCAGCAGGTCTTGACTCTCTTGTCCTGGGAGAAGGTCAAATTCTTGCTCAGGTGAAACAAGTTGTTAAAGTTGGGCAAGGAGTTGTTGGCTTCGGCAGGAACATTAGTGGGCTGTTCAAGCATGCAATCACCGTAGGAAAGCGGGTTAGAACTGAGACTAACATTGCTGCTGGGGCAGTTTCTGTAAGCTCTGCTGCTGTTGAACTTGCCTTGATGAAGCTTCCTGCATCCTCACATGCTAGTGCGAGAATGTTGGTGATTGGTGCTGGGAAGATGGGGAAGCTTGTGATCAAACACTTGGTAGCAAAAGGTTGCACAAAGATGGTTGTTATGAATAGAACCGAGGAGAGAGTGACTGCAGTCTGTGAGGAGTTGAATGGTGTTGAGATAATCTACAAGCCTCTCACAGAAATGCTTACCTGTGCAGCTGAGGCAGATGTGATTTTTACAAGCACGGCATCAGAAACCCCATTATTTTTCAAAGAGGATGTAAAGGACCTTCCTGTTGTGGGTCCAGAGACTGGTGGTTCGAGGTTTTTTGTTGATATTTCTGTCCCTAGGAATGTGGGCTCATGTGTCGCTGATGTTGATGGTGTGCGAGTTTACAATGTTGATGACCTTAAGGAGGTTGTGGCTGCTAACAAAGAGGATCGCCTCCGGAAAGCAATGGAAGCTCAGGAAATTATTACTGAAGAATCAAAACAATTTGAAGCATGGAGGGATTCATTGGAGACAGTCCCTACCATCAAGAAATTAAGAGCTTATGCTGAAAGAATCAGAGCTGCAGAGCTTGAGAAATGTTTATCAAAAATGGGTGATGACATCTCAAAGAAAACTAGAAGAGCTGTCGATGATCTTAGCCGAGGTATTGTGAACAAGCTCCTTCATGGTCCAATGCAGCACTTAAGATGCGATGGGAGTGATAGCCGAACTCTGAGTGAAACCCTTGAGAATATGCATGCTCTTAATAGAATGTTCAGTCTTGAGACAGAAATTTCGGTCTTGGAACAGAAGATTCGAGCTAAGGTGGAACAAACCCAGAAGTAA

Protein Analysis

545

Amino Acids

59.14

Weight (kDa)

8.52

Isoelectric Point (pI)

38.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 434
AasI GACNNNNNNGTC 2 cut(s) 79, 608
Acc36I ACCTGC 2 cut(s) 434, 584
AccB7I CCANNNNNTGG 1 cut(s) 1109
AccI GTMKAC 1 cut(s) 11
AccIII TCCGGA 1 cut(s) 1245
AciI CCGC 3 cut(s) 5, 68, 730
AclWI GGATC 1 cut(s) 1245
AcsI RAATTY 2 cut(s) 627, 1581
AcuI CTGAAG 1 cut(s) 1299
AfiI CCNNNNNNNGG 3 cut(s) 1097, 1109, 1213
AflII CTTAAG 2 cut(s) 1208, 1492
AgeI ACCGGT 2 cut(s) 203, 540
AgsI TTSAA 8 cut(s) 52, 326, 584, 706, 791, 964, 1069, 1298
AjnI CCWGG 1 cut(s) 612
Alw26I GTCTC 5 cut(s) 118, 737, 1100, 1313, 1568
AlwI GGATC 1 cut(s) 1245
AlwNI CAGNNNCTG 3 cut(s) 426, 770, 1109
Ama87I CYCGRG 1 cut(s) 366
Aor13HI TCCGGA 1 cut(s) 1245
AoxI GGCC 2 cut(s) 87, 362
ApoI RAATTY 2 cut(s) 627, 1581
ArsI GACNNNNNNTTYG 4 cut(s) 1099, 1131, 1567, 1599
AsiGI ACCGGT 2 cut(s) 203, 540
AspA2I CCTAGG 1 cut(s) 1145
AspS9I GGNCC 5 cut(s) 87, 514, 1084, 1100, 1478
AsuHPI GGTGA 4 cut(s) 652, 709, 856, 1415
AvaI CYCGRG 1 cut(s) 366
AvaII GGWCC 4 cut(s) 514, 1084, 1100, 1478
AvrII CCTAGG 1 cut(s) 1145
BanII GRGCYC 1 cut(s) 1160
BarI GAAGNNNNNNTAC 2 cut(s) 1071, 1103
BbvCI CCTCAGC 1 cut(s) 1017
BccI CCATC 6 cut(s) 353, 856, 904, 1172, 1340, 1496
BceAI ACGGC 1 cut(s) 1059
BcgI CGANNNNNNTGC 2 cut(s) 161, 195
BciT130I CCWGG 1 cut(s) 614
BclI TGATCA 1 cut(s) 876
BcoDI GTCTC 5 cut(s) 118, 737, 1100, 1313, 1568
BfaI CTAG 4 cut(s) 341, 828, 1146, 1425
BfmI CTRYAG 2 cut(s) 945, 1371
BfrI CTTAAG 2 cut(s) 1208, 1492
BfuAI ACCTGC 2 cut(s) 434, 584
BlnI CCTAGG 1 cut(s) 1145
Bme1390I CCNGG 1 cut(s) 614
Bme18I GGWCC 4 cut(s) 514, 1084, 1100, 1478
BmeT110I CYCGRG 1 cut(s) 366
BmgT120I GGNCC 5 cut(s) 87, 514, 1084, 1100, 1478
BmiI GGNNCC 3 cut(s) 515, 516, 1101
BmrFI CCNGG 1 cut(s) 614
BmsI GCATC 7 cut(s) 178, 475, 553, 583, 824, 1055, 1487
BoxI GACNNNNGTC 1 cut(s) 947
Bpu10I CCTNAGC 4 cut(s) 636, 1017, 1263, 1611
BpuEI CTTGAG 5 cut(s) 227, 254, 1400, 1556, 1592
BsaI GGTCTC 1 cut(s) 118
BsaJI CCNNGG 4 cut(s) 613, 930, 1145, 1450
BsaWI WCCGGW 3 cut(s) 203, 540, 1245
BsaXI ACNNNNNCTCC 2 cut(s) 29, 59
Bsc4I CCNNNNNNNGG 3 cut(s) 1097, 1109, 1213
Bse118I RCCGGY 2 cut(s) 203, 540
Bse1I ACTGG 2 cut(s) 15, 1114
Bse3DI GCAATG 2 cut(s) 750, 1260
BseAI TCCGGA 1 cut(s) 1245
BseBI CCWGG 1 cut(s) 614
BseDI CCNNGG 4 cut(s) 613, 930, 1145, 1450
BseGI GGATG 4 cut(s) 345, 501, 815, 1081
BseLI CCNNNNNNNGG 3 cut(s) 1097, 1109, 1213
BseMI GCAATG 2 cut(s) 750, 1260
BseMII CTCAG 9 cut(s) 433, 476, 480, 516, 650, 732, 1008, 1277, 1514
BseNI ACTGG 2 cut(s) 15, 1114
BseRI GAGGAG 2 cut(s) 947, 971
BseYI CCCAGC 2 cut(s) 758, 854
BsgI GTGCAG 1 cut(s) 1032
BshFI GGCC 2 cut(s) 89, 364
BshTI ACCGGT 2 cut(s) 203, 540
BsiHKCI CYCGRG 1 cut(s) 366
BsiSI CCGG 4 cut(s) 24, 204, 541, 1246
BslFI GGGAC 3 cut(s) 500, 1127, 1310
BslI CCNNNNNNNGG 3 cut(s) 1097, 1109, 1213
BsmAI GTCTC 5 cut(s) 118, 737, 1100, 1313, 1568
BsmFI GGGAC 3 cut(s) 500, 1127, 1310
BsnI GGCC 2 cut(s) 89, 364
Bso31I GGTCTC 1 cut(s) 118
BsoBI CYCGRG 1 cut(s) 366
Bsp1286I GDGCHC 1 cut(s) 1160
Bsp13I TCCGGA 1 cut(s) 1245
Bsp143I GATC 3 cut(s) 876, 1237, 1441
BspACI CCGC 3 cut(s) 5, 68, 730
BspANI GGCC 2 cut(s) 89, 364
BspCNI CTCAG 9 cut(s) 432, 475, 481, 517, 649, 733, 1009, 1276, 1515
BspEI TCCGGA 1 cut(s) 1245
BspLI GGNNCC 3 cut(s) 515, 516, 1101
BspMAI CTGCAG 2 cut(s) 949, 1375
BspMI ACCTGC 2 cut(s) 434, 584
BspPI GGATC 1 cut(s) 1245
BspQI GCTCTTC 1 cut(s) 1423
BspTI CTTAAG 2 cut(s) 1208, 1492
BspTNI GGTCTC 1 cut(s) 118
BsrDI GCAATG 2 cut(s) 750, 1260
BsrFI RCCGGY 2 cut(s) 203, 540
BsrI ACTGG 2 cut(s) 15, 1114
BssAI RCCGGY 2 cut(s) 203, 540
BssECI CCNNGG 4 cut(s) 613, 930, 1145, 1450
BssMI GATC 3 cut(s) 876, 1237, 1441
BssT1I CCWWGG 1 cut(s) 1145
Bst2UI CCWGG 1 cut(s) 614
Bst4CI ACNGT 3 cut(s) 384, 721, 1324
Bst6I CTCTTC 1 cut(s) 1423
BstAFI CTTAAG 2 cut(s) 1208, 1492
BstC8I GCNNGC 3 cut(s) 536, 711, 1548
BstENI CCTNNNNNAGG 1 cut(s) 1211
BstF5I GGATG 4 cut(s) 345, 501, 815, 1081
BstKTI GATC 3 cut(s) 879, 1240, 1444
BstMAI GTCTC 5 cut(s) 118, 737, 1100, 1313, 1568
BstMBI GATC 3 cut(s) 876, 1237, 1441
BstMWI GCNNNNNNNGC 6 cut(s) 188, 535, 706, 761, 1019, 1259
BstNI CCWGG 1 cut(s) 614
BstNSI RCATGY 3 cut(s) 713, 827, 1550
BstPAI GACNNNNGTC 1 cut(s) 947
BstSCI CCNGG 1 cut(s) 612
BstSFI CTRYAG 2 cut(s) 945, 1371
BsuRI GGCC 2 cut(s) 89, 364
BtgZI GCGATG 1 cut(s) 1515
BtsCI GGATG 4 cut(s) 345, 501, 815, 1081
BveI ACCTGC 2 cut(s) 434, 584
Cac8I GCNNGC 3 cut(s) 536, 711, 1548
CaiI CAGNNNCTG 3 cut(s) 426, 770, 1109
Cfr10I RCCGGY 2 cut(s) 203, 540
Cfr13I GGNCC 5 cut(s) 87, 514, 1084, 1100, 1478
CspAI ACCGGT 2 cut(s) 203, 540
CviAII CATG 6 cut(s) 710, 824, 1161, 1302, 1475, 1547
DpnI GATC 3 cut(s) 878, 1239, 1443
DpnII GATC 3 cut(s) 876, 1237, 1441
DrdI GACNNNNNNGTC 2 cut(s) 79, 608
DseDI GACNNNNNNGTC 2 cut(s) 79, 608
Eam1104I CTCTTC 1 cut(s) 1423
EarI CTCTTC 1 cut(s) 1423
Eco130I CCWWGG 1 cut(s) 1145
Eco24I GRGCYC 1 cut(s) 1160
Eco31I GGTCTC 1 cut(s) 118
Eco47I GGWCC 4 cut(s) 514, 1084, 1100, 1478
Eco57I CTGAAG 1 cut(s) 1299
Eco88I CYCGRG 1 cut(s) 366
EcoNI CCTNNNNNAGG 1 cut(s) 1211
EcoO109I RGGNCCY 3 cut(s) 87, 514, 1084
EcoRII CCWGG 1 cut(s) 612
EcoT14I CCWWGG 1 cut(s) 1145
EcoT22I ATGCAT 1 cut(s) 1548
EcoT38I GRGCYC 1 cut(s) 1160
ErhI CCWWGG 1 cut(s) 1145
FaeI CATG 6 cut(s) 713, 827, 1164, 1305, 1478, 1550
FaqI GGGAC 3 cut(s) 500, 1127, 1310
FatI CATG 6 cut(s) 709, 823, 1160, 1301, 1474, 1546
FauI CCCGC 1 cut(s) 723
FbaI TGATCA 1 cut(s) 876
FblI GTMKAC 1 cut(s) 11
FokI GGATG 4 cut(s) 332, 508, 802, 1088
FriOI GRGCYC 1 cut(s) 1160
FspBI CTAG 4 cut(s) 341, 828, 1146, 1425
GsaI CCCAGC 2 cut(s) 762, 858
HaeIII GGCC 2 cut(s) 89, 364
HapII CCGG 4 cut(s) 24, 204, 541, 1246
Hin1II CATG 6 cut(s) 713, 827, 1164, 1305, 1478, 1550
HincII GTYRAC 1 cut(s) 12
HindII GTYRAC 1 cut(s) 12
HindIII AAGCTT 2 cut(s) 806, 869
HinfI GANTC 6 cut(s) 151, 602, 1283, 1310, 1362, 1603
HpaII CCGG 4 cut(s) 24, 204, 541, 1246
HphI GGTGA 4 cut(s) 652, 709, 856, 1415
Hpy166II GTNNAC 3 cut(s) 12, 1192, 1462
Hpy188I TCNGA 7 cut(s) 156, 187, 210, 526, 1051, 1367, 1524
Hpy8I GTNNAC 3 cut(s) 12, 1192, 1462
Hpy99I CGWCG 3 cut(s) 67, 82, 85
HpyAV CCTTC 4 cut(s) 135, 614, 1097, 1481
HpyCH4III ACNGT 3 cut(s) 384, 721, 1324
HpyCH4IV ACGT 1 cut(s) 77
HpyCH4V TGCA 9 cut(s) 429, 713, 815, 903, 947, 1013, 1373, 1486, 1546
HpyF10VI GCNNNNNNNGC 6 cut(s) 188, 535, 706, 761, 1019, 1259
HpySE526I ACGT 1 cut(s) 77
Hsp92II CATG 6 cut(s) 713, 827, 1164, 1305, 1478, 1550
KflI GGGWCCC 1 cut(s) 514
Kpn2I TCCGGA 1 cut(s) 1245
Ksp22I TGATCA 1 cut(s) 876
Kzo9I GATC 3 cut(s) 876, 1237, 1441
LguI GCTCTTC 1 cut(s) 1423
LmnI GCTCC 3 cut(s) 26, 135, 1473
LweI GCATC 7 cut(s) 178, 475, 553, 583, 824, 1055, 1487
MaeI CTAG 4 cut(s) 341, 828, 1146, 1425
MaeII ACGT 1 cut(s) 77
MaeIII GTNAC 2 cut(s) 484, 940
MalI GATC 3 cut(s) 878, 1239, 1443
MboI GATC 3 cut(s) 876, 1237, 1441
MboII GAAGA 7 cut(s) 48, 51, 416, 871, 1292, 1440, 1612
MhlI GDGCHC 1 cut(s) 1160
MluCI AATT 6 cut(s) 32, 627, 1269, 1292, 1340, 1581
MlyI GAGTC 1 cut(s) 596
Mph1103I ATGCAT 1 cut(s) 1548
MroI TCCGGA 1 cut(s) 1245
MseI TTAA 6 cut(s) 392, 654, 1209, 1343, 1493, 1554
MslI CAYNNNNRTG 4 cut(s) 471, 828, 908, 998
MspA1I CMGCKG 1 cut(s) 1016
MspCI CTTAAG 2 cut(s) 1208, 1492
MspI CCGG 4 cut(s) 24, 204, 541, 1246
MspR9I CCNGG 1 cut(s) 614
MvaI CCWGG 1 cut(s) 614
MwoI GCNNNNNNNGC 6 cut(s) 188, 535, 706, 761, 1019, 1259
NdeII GATC 3 cut(s) 876, 1237, 1441
NlaIII CATG 6 cut(s) 713, 827, 1164, 1305, 1478, 1550
NlaIV GGNNCC 3 cut(s) 515, 516, 1101
NmeAIII GCCGAG 1 cut(s) 1475
NmuCI GTSAC 2 cut(s) 484, 940
NsiI ATGCAT 1 cut(s) 1548
NspI RCATGY 3 cut(s) 713, 827, 1550
PaeI GCATGC 2 cut(s) 713, 1550
PaeR7I CTCGAG 1 cut(s) 366
PaqCI CACCTGC 1 cut(s) 434
PciSI GCTCTTC 1 cut(s) 1423
PcsI WCGNNNNNNNCGW 1 cut(s) 68
PfeI GAWTC 5 cut(s) 151, 1283, 1310, 1362, 1603
PflFI GACNNNGTC 1 cut(s) 76
PflMI CCANNNNNTGG 1 cut(s) 1109
PinAI ACCGGT 2 cut(s) 203, 540
PleI GAGTC 1 cut(s) 596
PpsI GAGTC 1 cut(s) 596
PpuMI RGGWCCY 2 cut(s) 514, 1084
PshAI GACNNNNGTC 1 cut(s) 947
Psp5II RGGWCCY 2 cut(s) 514, 1084
Psp6I CCWGG 1 cut(s) 612
PspFI CCCAGC 2 cut(s) 758, 854
PspGI CCWGG 1 cut(s) 612
PspN4I GGNNCC 3 cut(s) 515, 516, 1101
PspPI GGNCC 5 cut(s) 87, 514, 1084, 1100, 1478
PspPPI RGGWCCY 2 cut(s) 514, 1084
PspXI VCTCGAGB 1 cut(s) 366
PstI CTGCAG 2 cut(s) 949, 1375
PstNI CAGNNNCTG 3 cut(s) 426, 770, 1109
PsyI GACNNNGTC 1 cut(s) 76
PvuII CAGCTG 1 cut(s) 1016
RseI CAYNNNNRTG 4 cut(s) 471, 828, 908, 998
SalI GTCGAC 1 cut(s) 10
SapI GCTCTTC 1 cut(s) 1423
SaqAI TTAA 6 cut(s) 392, 654, 1209, 1343, 1493, 1554
Sau3AI GATC 3 cut(s) 876, 1237, 1441
Sau96I GGNCC 5 cut(s) 87, 514, 1084, 1100, 1478
SchI GAGTC 1 cut(s) 596
ScrFI CCNGG 1 cut(s) 614
SduI GDGCHC 1 cut(s) 1160
SfaNI GCATC 7 cut(s) 178, 475, 553, 583, 824, 1055, 1487
SfcI CTRYAG 2 cut(s) 945, 1371
Sfr274I CTCGAG 1 cut(s) 366
SinI GGWCC 4 cut(s) 514, 1084, 1100, 1478
SlaI CTCGAG 1 cut(s) 366
SmiMI CAYNNNNRTG 4 cut(s) 471, 828, 908, 998
SmlI CTYRAG 8 cut(s) 233, 242, 366, 1208, 1379, 1492, 1535, 1571
SmoI CTYRAG 8 cut(s) 233, 242, 366, 1208, 1379, 1492, 1535, 1571
SphI GCATGC 2 cut(s) 713, 1550
Sse9I AATT 6 cut(s) 32, 627, 1269, 1292, 1340, 1581
SsiI CCGC 3 cut(s) 5, 68, 730
SspI AATATT 1 cut(s) 223
SspMI CTAG 4 cut(s) 341, 828, 1146, 1425
StyD4I CCNGG 1 cut(s) 612
StyI CCWWGG 1 cut(s) 1145
TaaI ACNGT 3 cut(s) 384, 721, 1324
TaiI ACGT 1 cut(s) 80
TaqI TCGA 6 cut(s) 11, 83, 367, 1118, 1437, 1606
TaqII GACCGA 1 cut(s) 1576
TasI AATT 6 cut(s) 32, 627, 1269, 1292, 1340, 1581
TauI GCSGC 1 cut(s) 71
TfiI GAWTC 5 cut(s) 151, 1283, 1310, 1362, 1603
Tru1I TTAA 6 cut(s) 392, 654, 1209, 1343, 1493, 1554
Tru9I TTAA 6 cut(s) 392, 654, 1209, 1343, 1493, 1554
TseFI GTSAC 2 cut(s) 484, 940
Tsp45I GTSAC 2 cut(s) 484, 940
TspDTI ATGAA 4 cut(s) 818, 935, 1302, 1463
Tth111I GACNNNGTC 1 cut(s) 76
Van91I CCANNNNNTGG 1 cut(s) 1109
Vha464I CTTAAG 2 cut(s) 1208, 1492
VpaK11BI GGWCC 4 cut(s) 514, 1084, 1100, 1478
XagI CCTNNNNNAGG 1 cut(s) 1211
XapI RAATTY 2 cut(s) 627, 1581
XceI RCATGY 3 cut(s) 713, 827, 1550
XcmI CCANNNNNNNNNTGG 1 cut(s) 357
XhoI CTCGAG 1 cut(s) 366
XmaJI CCTAGG 1 cut(s) 1145
XmiI GTMKAC 1 cut(s) 11
XspI CTAG 4 cut(s) 341, 828, 1146, 1425
Zsp2I ATGCAT 1 cut(s) 1548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.