Prupe.1G571400_v2.0.a1

Aminomethyltransferase folate-binding domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
46578103 .. 46584044
5942 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G571400.3

Sequence Viewer

Length: 1275 bp
ATGGCTTCAATTACAGGTGAGCTTCTGCTTCTCAATCCATGGCGTTCCTTCTCTTATCTCGACCAGAACGGTGCGTTTCCCTGGACTCAGACCAAGACGAAGGAACATAAGCAGAAGCATAAGTTCACACTCTCTTCCAAAACGACTAGGAAAGGTGTCGTTTTGGCCTTGCCTTTCGACCTCTCCCCTCCTCCCATCGACCACGACCTCCTGCAGGACATTGTGGCAACTGAAGGGGCAAAGGTTTCCGATGATGGGATTGTCGAAACTTTCGGTAACGATGACCAAGCTTTTGATGCAGCCGATAATGGTGTTGTGGTAGCGGACCTTTCACATTTTGGACGGATAAGAGTTAGTGGAGAAGACCGTATCCAATTTCTTCACAACCAAACAACTGCCAATTTTGAATGCCTTCATGAAGGACAGGGATGTGACACCGTTTTTGTTACACCAACAGCTCGGACAATAGATATTGCACATGCGTGGATCATGAAAAATGCAGTACTGTTAGTGGTCTCACCGGTGACTTTGAGAAGTATCTCTGAAATGCTGAATAAGTACATATTCTTTAATGACAAGGTAGAGATTCAAGACATCACTAAGCAAACTTGCTTTTTTGTTTTGGTGGGACCTAAAAGCAACCAGATAATGGAAGAGTTAAACCTAGGTGATCTTGTTGGACAGCCATATGGCACACATCAGCATTTTAGTGTTAACGGGATGCCTATAACTGTGGGTGTGGGTAATGTCATTTCTGAAAAGGGTTTTTCACTTTTGATGTCACCAGCTGCTGCTGGATCAGTCTGGAAAACGATTCTGTCACAGGGTGCAATTCCAATGGGCTCTAATGCATGGGAAAAACTAAGAATTTTCCAAGGAAGGCCAGCTCCTCAGAAGGAGCTTACTAATGAATATAATGTACTGGAGGCTGGTCTCTGGAATTCGATCTCTTTGAACAAAGGATGCTACAAGGGACAAGAGACTATAGCTAGACTCATAACATATGACGGAGTTAAGCAAAGACTTTGGGCGATTCGTCTATCTGCCCCGGCAGAAGTTGGCAGCCTCATTACAATTGATGGGAAAAAGGTTGGGAAGCTCACAAGTTGCACATCGGGAAGAAAGGAAAATGGGTACTTTGGTTTAGGCTACATCAAGAGGCAAACTGTTTCAGAGGGAGACACTGTAATTGTTGGAGATTCTGTTCCTGGAACAGTGGTAGAAGTACCTTTTCTTGCTGGGCAACGCTCACTGACAAGGAGCTCAAGTTCTTGA

Protein Analysis

425

Amino Acids

46.37

Weight (kDa)

6.52

Isoelectric Point (pI)

35.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 649
AciI CCGC 1 cut(s) 323
AclWI GGATC 2 cut(s) 494, 805
AcsI RAATTY 2 cut(s) 867, 940
AcuI CTGAAG 1 cut(s) 252
AdeI CACNNNGTG 1 cut(s) 827
AfaI GTAC 5 cut(s) 504, 560, 921, 1136, 1227
AfiI CCNNNNNNNGG 3 cut(s) 214, 255, 649
AgeI ACCGGT 1 cut(s) 520
AgsI TTSAA 4 cut(s) 9, 407, 590, 955
AjnI CCWGG 2 cut(s) 80, 1207
AleI CACNNNNGTG 1 cut(s) 481
AloI GAACNNNNNNTCC 3 cut(s) 1188, 1220, 1252
AluBI AGCT 9 cut(s) 22, 290, 458, 788, 887, 901, 989, 1099, 1263
AluI AGCT 9 cut(s) 22, 290, 458, 788, 887, 901, 989, 1099, 1263
Alw21I GWGCWC 1 cut(s) 1265
Alw26I GTCTC 4 cut(s) 520, 938, 974, 1173
AlwI GGATC 2 cut(s) 494, 805
AlwNI CAGNNNCTG 1 cut(s) 791
AoxI GGCC 2 cut(s) 165, 881
ApeKI GCWGC 4 cut(s) 299, 788, 791, 1062
ApoI RAATTY 2 cut(s) 867, 940
ArsI GACNNNNNNTTYG 4 cut(s) 275, 307, 425, 457
AsiGI ACCGGT 1 cut(s) 520
Asp700I GAANNNNTTC 1 cut(s) 411
AspA2I CCTAGG 1 cut(s) 664
AspS9I GGNCC 2 cut(s) 325, 629
AsuC2I CCSGG 1 cut(s) 1049
AsuHPI GGTGA 5 cut(s) 29, 510, 535, 680, 774
AvaII GGWCC 2 cut(s) 325, 629
AvrII CCTAGG 1 cut(s) 664
BaeI ACNNNNGTAYC 2 cut(s) 1126, 1159
BanII GRGCYC 2 cut(s) 845, 1265
BbsI GAAGAC 1 cut(s) 369
Bbv12I GWGCWC 1 cut(s) 1265
BbvI GCAGC 4 cut(s) 311, 775, 778, 1074
BccI CCATC 3 cut(s) 203, 248, 1073
BciT130I CCWGG 2 cut(s) 82, 1209
BciVI GTATCC 1 cut(s) 380
BcnI CCSGG 1 cut(s) 1049
BcoDI GTCTC 4 cut(s) 520, 938, 974, 1173
BfaI CTAG 3 cut(s) 147, 665, 990
BfmI CTRYAG 2 cut(s) 212, 984
BfuI GTATCC 1 cut(s) 380
BisI GCNGC 4 cut(s) 300, 789, 792, 1063
BlnI CCTAGG 1 cut(s) 664
BlsI GCNGC 4 cut(s) 301, 790, 793, 1064
BmcAI AGTACT 1 cut(s) 504
Bme1390I CCNGG 3 cut(s) 82, 1049, 1209
Bme18I GGWCC 2 cut(s) 325, 629
BmgT120I GGNCC 2 cut(s) 325, 629
BmiI GGNNCC 1 cut(s) 630
BmrFI CCNGG 3 cut(s) 82, 1049, 1209
BmsI GCATC 3 cut(s) 286, 711, 953
BpiI GAAGAC 1 cut(s) 369
BpmI CTGGAG 1 cut(s) 944
BpuEI CTTGAG 1 cut(s) 1249
BpuMI CCSGG 1 cut(s) 1049
BsaI GGTCTC 2 cut(s) 520, 938
BsaJI CCNNGG 5 cut(s) 38, 80, 664, 874, 1047
BsaWI WCCGGW 1 cut(s) 520
BsaXI ACNNNNNCTCC 5 cut(s) 1170, 1188, 1200, 1218, 1252
Bsc4I CCNNNNNNNGG 3 cut(s) 214, 255, 649
Bse118I RCCGGY 1 cut(s) 520
Bse1I ACTGG 1 cut(s) 927
BseBI CCWGG 2 cut(s) 82, 1209
BseDI CCNNGG 5 cut(s) 38, 80, 664, 874, 1047
BseGI GGATG 3 cut(s) 434, 726, 968
BseLI CCNNNNNNNGG 3 cut(s) 214, 255, 649
BseMII CTCAG 2 cut(s) 101, 905
BseNI ACTGG 1 cut(s) 927
BseRI GAGGAG 2 cut(s) 180, 879
BseXI GCAGC 4 cut(s) 311, 775, 778, 1074
BseYI CCCAGC 1 cut(s) 1238
BshFI GGCC 2 cut(s) 167, 883
BshTI ACCGGT 1 cut(s) 520
BsiHKAI GWGCWC 1 cut(s) 1265
BsiSI CCGG 2 cut(s) 521, 1049
BslFI GGGAC 2 cut(s) 642, 987
BslI CCNNNNNNNGG 3 cut(s) 214, 255, 649
BsmAI GTCTC 4 cut(s) 520, 938, 974, 1173
BsmFI GGGAC 2 cut(s) 642, 987
BsmI GAATGC 1 cut(s) 413
BsnI GGCC 2 cut(s) 167, 883
Bso31I GGTCTC 2 cut(s) 520, 938
Bsp1286I GDGCHC 2 cut(s) 845, 1265
Bsp143I GATC 4 cut(s) 486, 670, 797, 945
Bsp19I CCATGG 1 cut(s) 38
BspACI CCGC 1 cut(s) 323
BspANI GGCC 2 cut(s) 167, 883
BspCNI CTCAG 2 cut(s) 100, 904
BspHI TCATGA 2 cut(s) 415, 489
BspLI GGNNCC 1 cut(s) 630
BspMAI CTGCAG 1 cut(s) 216
BspPI GGATC 2 cut(s) 494, 805
BspTNI GGTCTC 2 cut(s) 520, 938
BsrFI RCCGGY 1 cut(s) 520
BsrI ACTGG 1 cut(s) 927
BssAI RCCGGY 1 cut(s) 520
BssECI CCNNGG 5 cut(s) 38, 80, 664, 874, 1047
BssMI GATC 4 cut(s) 486, 670, 797, 945
BssT1I CCWWGG 3 cut(s) 38, 664, 874
Bst2UI CCWGG 2 cut(s) 82, 1209
Bst4CI ACNGT 8 cut(s) 71, 368, 439, 507, 733, 1168, 1186, 1216
Bst6I CTCTTC 2 cut(s) 139, 648
BstC8I GCNNGC 1 cut(s) 885
BstDEI CTNAG 4 cut(s) 87, 600, 863, 891
BstDSI CCRYGG 1 cut(s) 38
BstENI CCTNNNNNAGG 1 cut(s) 212
BstF5I GGATG 3 cut(s) 434, 726, 968
BstKTI GATC 4 cut(s) 489, 673, 800, 948
BstMAI GTCTC 4 cut(s) 520, 938, 974, 1173
BstMBI GATC 4 cut(s) 486, 670, 797, 945
BstMWI GCNNNNNNNGC 1 cut(s) 296
BstNI CCWGG 2 cut(s) 82, 1209
BstNSI RCATGY 1 cut(s) 482
BstSCI CCNGG 3 cut(s) 80, 1047, 1207
BstSFI CTRYAG 2 cut(s) 212, 984
BstV1I GCAGC 4 cut(s) 311, 775, 778, 1074
BstV2I GAAGAC 1 cut(s) 369
BsuI GTATCC 1 cut(s) 380
BsuRI GGCC 2 cut(s) 167, 883
BtgI CCRYGG 1 cut(s) 38
BtsCI GGATG 3 cut(s) 434, 726, 968
BtsIMutI CAGTG 3 cut(s) 1182, 1221, 1250
Cac8I GCNNGC 1 cut(s) 885
CaiI CAGNNNCTG 1 cut(s) 791
CciI TCATGA 2 cut(s) 415, 489
Cfr10I RCCGGY 1 cut(s) 520
Cfr13I GGNCC 2 cut(s) 325, 629
Csp6I GTAC 5 cut(s) 503, 559, 920, 1135, 1226
CspAI ACCGGT 1 cut(s) 520
CviAII CATG 5 cut(s) 39, 416, 479, 490, 852
CviQI GTAC 5 cut(s) 503, 559, 920, 1135, 1226
DdeI CTNAG 4 cut(s) 87, 600, 863, 891
DpnI GATC 4 cut(s) 488, 672, 799, 947
DpnII GATC 4 cut(s) 486, 670, 797, 945
DraIII CACNNNGTG 1 cut(s) 827
Eam1104I CTCTTC 2 cut(s) 139, 648
EarI CTCTTC 2 cut(s) 139, 648
Ecl136II GAGCTC 1 cut(s) 1263
Eco130I CCWWGG 3 cut(s) 38, 664, 874
Eco24I GRGCYC 2 cut(s) 845, 1265
Eco31I GGTCTC 2 cut(s) 520, 938
Eco47I GGWCC 2 cut(s) 325, 629
Eco53kI GAGCTC 1 cut(s) 1263
Eco57I CTGAAG 1 cut(s) 252
EcoICRI GAGCTC 1 cut(s) 1263
EcoNI CCTNNNNNAGG 1 cut(s) 212
EcoO109I RGGNCCY 1 cut(s) 629
EcoRI GAATTC 1 cut(s) 940
EcoRII CCWGG 2 cut(s) 80, 1207
EcoT14I CCWWGG 3 cut(s) 38, 664, 874
EcoT22I ATGCAT 1 cut(s) 853
EcoT38I GRGCYC 2 cut(s) 845, 1265
ErhI CCWWGG 3 cut(s) 38, 664, 874
FaeI CATG 5 cut(s) 42, 419, 482, 493, 855
FaqI GGGAC 2 cut(s) 642, 987
FatI CATG 5 cut(s) 38, 415, 478, 489, 851
FauNDI CATATG 2 cut(s) 688, 1003
Fnu4HI GCNGC 4 cut(s) 300, 789, 792, 1063
FokI GGATG 3 cut(s) 441, 733, 975
FriOI GRGCYC 2 cut(s) 845, 1265
Fsp4HI GCNGC 4 cut(s) 300, 789, 792, 1063
FspBI CTAG 3 cut(s) 147, 665, 990
GluI GCNGC 4 cut(s) 300, 789, 792, 1063
GsaI CCCAGC 1 cut(s) 1242
GsuI CTGGAG 1 cut(s) 944
HaeIII GGCC 2 cut(s) 167, 883
HapII CCGG 2 cut(s) 521, 1049
Hin1II CATG 5 cut(s) 42, 419, 482, 493, 855
HincII GTYRAC 1 cut(s) 715
HindII GTYRAC 1 cut(s) 715
HindIII AAGCTT 1 cut(s) 288
HinfI GANTC 6 cut(s) 85, 586, 814, 993, 1033, 1199
HpaI GTTAAC 1 cut(s) 715
HpaII CCGG 2 cut(s) 521, 1049
HphI GGTGA 5 cut(s) 29, 510, 535, 680, 774
Hpy166II GTNNAC 2 cut(s) 126, 715
Hpy188I TCNGA 7 cut(s) 90, 250, 462, 544, 757, 894, 1174
Hpy188III TCNNGA 9 cut(s) 59, 416, 490, 590, 805, 937, 1116, 1156, 1272
Hpy8I GTNNAC 2 cut(s) 126, 715
HpyAV CCTTC 7 cut(s) 58, 94, 227, 413, 422, 873, 889
HpyCH4III ACNGT 8 cut(s) 71, 368, 439, 507, 733, 1168, 1186, 1216
HpyCH4V TGCA 7 cut(s) 214, 299, 476, 500, 830, 851, 1110
HpyF10VI GCNNNNNNNGC 1 cut(s) 296
HpyF3I CTNAG 4 cut(s) 87, 600, 863, 891
Hsp92II CATG 5 cut(s) 42, 419, 482, 493, 855
KspAI GTTAAC 1 cut(s) 715
Kzo9I GATC 4 cut(s) 486, 670, 797, 945
LmnI GCTCC 3 cut(s) 892, 898, 1260
Lsp1109I GCAGC 4 cut(s) 311, 775, 778, 1074
LweI GCATC 3 cut(s) 286, 711, 953
MaeI CTAG 3 cut(s) 147, 665, 990
MaeIII GTNAC 6 cut(s) 275, 431, 445, 523, 780, 819
MalI GATC 4 cut(s) 488, 672, 799, 947
MboI GATC 4 cut(s) 486, 670, 797, 945
MboII GAAGA 5 cut(s) 126, 371, 374, 665, 1131
MfeI CAATTG 1 cut(s) 1074
MhlI GDGCHC 2 cut(s) 845, 1265
MluCI AATT 8 cut(s) 9, 374, 400, 831, 867, 940, 1074, 1188
MlyI GAGTC 2 cut(s) 79, 987
MmeI TCCRAC 2 cut(s) 658, 1174
MnlI CCTC 9 cut(s) 191, 198, 201, 218, 900, 919, 1076, 1152, 1168
Mph1103I ATGCAT 1 cut(s) 853
MroXI GAANNNNTTC 1 cut(s) 411
MseI TTAA 4 cut(s) 570, 659, 714, 1014
MslI CAYNNNNRTG 2 cut(s) 481, 708
MspA1I CMGCKG 1 cut(s) 788
MspI CCGG 2 cut(s) 521, 1049
MspR9I CCNGG 3 cut(s) 82, 1049, 1209
MunI CAATTG 1 cut(s) 1074
Mva1269I GAATGC 1 cut(s) 413
MvaI CCWGG 2 cut(s) 82, 1209
MwoI GCNNNNNNNGC 1 cut(s) 296
NciI CCSGG 1 cut(s) 1049
NcoI CCATGG 1 cut(s) 38
NdeI CATATG 2 cut(s) 688, 1003
NdeII GATC 4 cut(s) 486, 670, 797, 945
NlaIII CATG 5 cut(s) 42, 419, 482, 493, 855
NlaIV GGNNCC 1 cut(s) 630
NmuCI GTSAC 4 cut(s) 431, 523, 780, 819
NsiI ATGCAT 1 cut(s) 853
NspI RCATGY 1 cut(s) 482
OliI CACNNNNGTG 1 cut(s) 481
PagI TCATGA 2 cut(s) 415, 489
PctI GAATGC 1 cut(s) 413
PdmI GAANNNNTTC 1 cut(s) 411
PfeI GAWTC 4 cut(s) 586, 814, 1033, 1199
PflMI CCANNNNNTGG 1 cut(s) 649
PfoI TCCNGGA 1 cut(s) 1207
PinAI ACCGGT 1 cut(s) 520
PkrI GCNGC 4 cut(s) 301, 790, 793, 1064
PleI GAGTC 2 cut(s) 79, 987
PpsI GAGTC 2 cut(s) 79, 987
PpuMI RGGWCCY 1 cut(s) 629
Psp124BI GAGCTC 1 cut(s) 1265
Psp5II RGGWCCY 1 cut(s) 629
Psp6I CCWGG 2 cut(s) 80, 1207
PspFI CCCAGC 1 cut(s) 1238
PspGI CCWGG 2 cut(s) 80, 1207
PspN4I GGNNCC 1 cut(s) 630
PspPI GGNCC 2 cut(s) 325, 629
PspPPI RGGWCCY 1 cut(s) 629
PstI CTGCAG 1 cut(s) 216
PstNI CAGNNNCTG 1 cut(s) 791
PvuII CAGCTG 1 cut(s) 788
RsaI GTAC 5 cut(s) 504, 560, 921, 1136, 1227
RsaNI GTAC 5 cut(s) 503, 559, 920, 1135, 1226
RseI CAYNNNNRTG 2 cut(s) 481, 708
SacI GAGCTC 1 cut(s) 1265
SaqAI TTAA 4 cut(s) 570, 659, 714, 1014
SatI GCNGC 4 cut(s) 300, 789, 792, 1063
Sau3AI GATC 4 cut(s) 486, 670, 797, 945
Sau96I GGNCC 2 cut(s) 325, 629
SbfI CCTGCAGG 1 cut(s) 216
ScaI AGTACT 1 cut(s) 504
SchI GAGTC 2 cut(s) 79, 987
ScrFI CCNGG 3 cut(s) 82, 1049, 1209
SdaI CCTGCAGG 1 cut(s) 216
SduI GDGCHC 2 cut(s) 845, 1265
SfaNI GCATC 3 cut(s) 286, 711, 953
SfcI CTRYAG 2 cut(s) 212, 984
SgrAI CRCCGGYG 1 cut(s) 520
SinI GGWCC 2 cut(s) 325, 629
SmiMI CAYNNNNRTG 2 cut(s) 481, 708
SmlI CTYRAG 1 cut(s) 1264
SmoI CTYRAG 1 cut(s) 1264
Sse8387I CCTGCAGG 1 cut(s) 216
Sse9I AATT 8 cut(s) 9, 374, 400, 831, 867, 940, 1074, 1188
SsiI CCGC 1 cut(s) 323
SspMI CTAG 3 cut(s) 147, 665, 990
SstI GAGCTC 1 cut(s) 1265
StyD4I CCNGG 3 cut(s) 80, 1047, 1207
StyI CCWWGG 3 cut(s) 38, 664, 874
TaaI ACNGT 8 cut(s) 71, 368, 439, 507, 733, 1168, 1186, 1216
TaqI TCGA 5 cut(s) 60, 177, 198, 264, 944
TasI AATT 8 cut(s) 9, 374, 400, 831, 867, 940, 1074, 1188
TatI WGTACW 3 cut(s) 502, 558, 919
TfiI GAWTC 4 cut(s) 586, 814, 1033, 1199
Tru1I TTAA 4 cut(s) 570, 659, 714, 1014
Tru9I TTAA 4 cut(s) 570, 659, 714, 1014
TscAI CASTG 3 cut(s) 1189, 1221, 1257
TseFI GTSAC 4 cut(s) 431, 523, 780, 819
TseI GCWGC 4 cut(s) 299, 788, 791, 1062
Tsp45I GTSAC 4 cut(s) 431, 523, 780, 819
TspDTI ATGAA 4 cut(s) 404, 432, 506, 924
TspGWI ACGGA 2 cut(s) 358, 1023
TspRI CASTG 3 cut(s) 1189, 1221, 1257
Van91I CCANNNNNTGG 1 cut(s) 649
VpaK11BI GGWCC 2 cut(s) 325, 629
XagI CCTNNNNNAGG 1 cut(s) 212
XapI RAATTY 2 cut(s) 867, 940
XceI RCATGY 1 cut(s) 482
XmaJI CCTAGG 1 cut(s) 664
XmnI GAANNNNTTC 1 cut(s) 411
XspI CTAG 3 cut(s) 147, 665, 990
ZrmI AGTACT 1 cut(s) 504
Zsp2I ATGCAT 1 cut(s) 853
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.