Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0016519

Physical Location & Seq

Genomic Coordinates Reverse (-)

46712759 .. 46714261

Gene Structure 1503 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G573000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGGCTGCTATCTCTTGCTCAGCCTCTGACCTCCAACCCCTTTTGGGTGCAGCTGCCAATGCCACCGCAGCCGCCCAATACATCTGCGGCCGCTTTGATGCCGTGTCGAACAAGTTTGTTGACACAGCTTATGCTGTTGACAACACCTACCTTCTCTTCTCTGCCTACCTTGTTTTCGCGATGCAGCTCGGCTTTGCCATGCTCTGTGCCGGCTCTGTTCGTGCCAAGAACACCATGAACATAATGCTCACCAATGTCCTTGACGCTGCCACAGGCGGCCTCTTCTACTACCTTTTTGGTTTTGCCTTGGCCTTTGGCACCCCCTCCAATGGCTTCATAGGCCAACACTTCTTTGGCCTTAACAAGTTTCCTTCTCAGTCTTTCGATTACGGTTACTTTCTTTATCAATGGGCTTTTGCCATTGCAGCTGCTGGAATCACAAGTGGTTCCATTGCTGAACGAACCCAATTCGTTGCATACTTGATCTATTCATCTTTCTTGACTGGCTTCGTCTACCCCATTGTTTCTCATTGGTTTTGGTCTGCTGATGGATGGGCAAGCCCTGCTCGTGCTGACAATCTTTTATTTGGTTCTGGGGTCATTGATTTTGCAGGCTCTGGTGTTGTTCACCTGGTTGGAGGCATAGCAGGCTTGTGGGGTGCTCTTATCGAAGGCCCCCGCATAGGCCGGTTCGATCATGAAGGTAGGTCTGTGAGTCTGCGTGGACATAGCGGCACATTGGTTGTTTTGGGCACATTTCTGCTTTGGTTTGGTTGGTATGGCTTCAATGCAGGCTCATTCCTCAACATTCTCAAGGCCTATGGAGAGAGTGGATCCTATTATGGACAATGGAGTGCAATAGGAAGAACTGCAGTGACAACCACAATGGCTGGATGCTCAGCAGCACTGACTACTCTCTTTGGGAAGCGCTTGCTCTCCGGTCATTGGAACCTCACCGACGTTTGCAATGGCCTGCTTGGCGGGTTTGCAGCAATCACGTCTGGTTGCTCAGTTGTTGATCCTTGGGCTGCAATCATTTGTGGGTTTGTGGCAGCTTGGGTTTTGATGGGATGCAACAAGCTTGCTGAGAAGTTGAAGTATGATGATCCATTAGAAGCAGCACAGCTTCATGGAGGGTGTGGCTCATGGGGAATTATATTCACTGCATTGTTCGCCAAAAAGGCTTATGTGGATGAAGTCTATTCAGGGCAACCAAACAGGCCATATGGGCTTTTGATGGGAGGAGGTGGAAAGCTCTTGGCTGCACATTTGGTTCAGATTGTGGTGATTGTAGGGTTTGTGAGCTTGACAATGGGAACATTGTTTTTCTTGCTGCACAAGTTGAAGCTCTTGAGGATTTCATCAGAGGAGGAGATGGCAGGAATGGATGTGACCAGTCATGGTGGATTGGCTTATGTATATAACGAAGAATGCAACGATCCGGCAATGCTCAAACCTGGATTTGTGGTCTCAAGGACAGCTCCTCCATCATCAGCTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008519 GO:0009506 GO:0015075 GO:0015291 GO:0015398 GO:0015695 GO:0015696 GO:0016020 GO:0016021 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0031226 GO:0034220 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072488 GO:0098655

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ammonium_transp

Protein Analysis

501

Amino Acids

53.25

Weight (kDa)

6.54

Isoelectric Point (pI)

24.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016519)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28700
fragaria_vesca	FvH4_2g20250
malus_domestica	MD05G1186200.v1.1
prunus_persica	Prupe.1G573000_v2.0.a1 Prupe.8G213000_v2.0.a1
pyrus_communis	pycom05g17070
rosa_chinensis	RchiOBHm_Chr6g0286021
rosa_laevigata	RLG00000012589
rosa_roxburghii	Rroxscaffold_7G00182520
rosa_rugosa	Rorug06G0178300
rosa_samantha	Rh6AG290300 Rh6CG293300 Rh6DG285400
rosa_wichuraiana	Rw6G025020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	317
AccI	GTMKAC	1 cut(s)	513
AccII	CGCG	1 cut(s)	179
AciI	CCGC	8 cut(s)	66, 72, 87, 91, 276, 679, 732, 981
AclWI	GGATC	5 cut(s)	828, 841, 1013, 1100, 1433
AcoI	YGGCCR	1 cut(s)	88
AfeI	AGCGCT	1 cut(s)	929
AfiI	CCNNNNNNNGG	4 cut(s)	44, 329, 683, 945
AgsI	TTSAA	3 cut(s)	787, 1096, 1345
AjiI	CACGTC	1 cut(s)	999
AjnI	CCWGG	2 cut(s)	630, 1456
Alw21I	GWGCWC	1 cut(s)	664
Alw26I	GTCTC	1 cut(s)	1474
AlwI	GGATC	5 cut(s)	828, 841, 1013, 1100, 1433
AlwNI	CAGNNNCTG	3 cut(s)	26, 431, 617
Aor51HI	AGCGCT	1 cut(s)	929
AspLEI	GCGC	1 cut(s)	930
AspS9I	GGNCC	1 cut(s)	674
AsuHPI	GGTGA	4 cut(s)	241, 620, 946, 1297
BaeGI	GKGCMC	1 cut(s)	755
BamHI	GGATCC	1 cut(s)	833
BanI	GGYRCC	1 cut(s)	317
BauI	CACGAG	1 cut(s)	567
Bbv12I	GWGCWC	1 cut(s)	664
BccI	CCATC	6 cut(s)	542, 546, 1060, 1231, 1369, 1495
BceAI	ACGGC	1 cut(s)	86
BciT130I	CCWGG	2 cut(s)	632, 1458
BcoDI	GTCTC	1 cut(s)	1474
BfmI	CTRYAG	1 cut(s)	870
BfoI	RGCGCY	1 cut(s)	931
BglI	GCCNNNNNGGC	3 cut(s)	978, 1181, 1228
BlpI	GCTNAGC	2 cut(s)	19, 898
Bme1390I	CCNGG	2 cut(s)	632, 1458
BmgBI	CACGTC	1 cut(s)	999
BmgT120I	GGNCC	1 cut(s)	674
BmiI	GGNNCC	5 cut(s)	319, 448, 676, 835, 950
BmrFI	CCNGG	2 cut(s)	632, 1458
BmsI	GCATC	4 cut(s)	88, 171, 884, 1061
Bpu1102I	GCTNAGC	2 cut(s)	19, 898
BpuEI	CTTGAG	3 cut(s)	797, 1372, 1456
BsaI	GGTCTC	1 cut(s)	1474
BsaJI	CCNNGG	2 cut(s)	306, 1022
BsaWI	WCCGGW	1 cut(s)	938
BsaXI	ACNNNNNCTCC	2 cut(s)	1468, 1498
Bsc4I	CCNNNNNNNGG	4 cut(s)	44, 329, 683, 945
Bse118I	RCCGGY	2 cut(s)	209, 687
Bse1I	ACTGG	2 cut(s)	508, 1395
Bse3DI	GCAATG	4 cut(s)	420, 450, 973, 1452
BseBI	CCWGG	2 cut(s)	632, 1458
BseDI	CCNNGG	2 cut(s)	306, 1022
BseGI	GGATG	5 cut(s)	557, 899, 1076, 1198, 1393
BseLI	CCNNNNNNNGG	4 cut(s)	44, 329, 683, 945
BseMI	GCAATG	4 cut(s)	420, 450, 973, 1452
BseMII	CTCAG	5 cut(s)	33, 389, 912, 1023, 1077
BseNI	ACTGG	2 cut(s)	508, 1395
BseRI	GAGGAG	4 cut(s)	1257, 1382, 1385, 1473
BseSI	GKGCMC	1 cut(s)	755
BseX3I	CGGCCG	1 cut(s)	88
BsgI	GTGCAG	3 cut(s)	69, 1248, 1319
Bsh1236I	CGCG	1 cut(s)	179
Bsh1285I	CGRYCG	1 cut(s)	91
BshNI	GGYRCC	1 cut(s)	317
BsiEI	CGRYCG	1 cut(s)	91
BsiHKAI	GWGCWC	1 cut(s)	664
BsiSI	CCGG	4 cut(s)	210, 688, 939, 1442
BslI	CCNNNNNNNGG	4 cut(s)	44, 329, 683, 945
BsmAI	GTCTC	1 cut(s)	1474
BsmI	GAATGC	1 cut(s)	1436
Bso31I	GGTCTC	1 cut(s)	1474
Bsp1286I	GDGCHC	2 cut(s)	664, 755
Bsp143I	GATC	6 cut(s)	483, 694, 833, 1018, 1105, 1438
Bsp1720I	GCTNAGC	2 cut(s)	19, 898
Bsp68I	TCGCGA	1 cut(s)	179
BspACI	CCGC	8 cut(s)	66, 72, 87, 91, 276, 679, 732, 981
BspCNI	CTCAG	5 cut(s)	32, 388, 911, 1022, 1078
BspFNI	CGCG	1 cut(s)	179
BspHI	TCATGA	1 cut(s)	697
BspLI	GGNNCC	5 cut(s)	319, 448, 676, 835, 950
BspMAI	CTGCAG	1 cut(s)	874
BspPI	GGATC	5 cut(s)	828, 841, 1013, 1100, 1433
BspT107I	GGYRCC	1 cut(s)	317
BspTNI	GGTCTC	1 cut(s)	1474
BsrDI	GCAATG	4 cut(s)	420, 450, 973, 1452
BsrFI	RCCGGY	2 cut(s)	209, 687
BsrI	ACTGG	2 cut(s)	508, 1395
BssAI	RCCGGY	2 cut(s)	209, 687
BssECI	CCNNGG	2 cut(s)	306, 1022
BssMI	GATC	6 cut(s)	483, 694, 833, 1018, 1105, 1438
BssSI	CACGAG	1 cut(s)	567
BssT1I	CCWWGG	2 cut(s)	306, 1022
Bst2BI	CACGAG	1 cut(s)	567
Bst2UI	CCWGG	2 cut(s)	632, 1458
Bst4CI	ACNGT	1 cut(s)	392
Bst6I	CTCTTC	2 cut(s)	161, 287
BstAPI	GCANNNNNTGC	1 cut(s)	563
BstC8I	GCNNGC	8 cut(s)	211, 559, 613, 649, 793, 932, 974, 1083
BstDEI	CTNAG	5 cut(s)	19, 375, 898, 1009, 1086
BstF5I	GGATG	5 cut(s)	557, 899, 1076, 1198, 1393
BstFNI	CGCG	1 cut(s)	179
BstH2I	RGCGCY	1 cut(s)	931
BstHHI	GCGC	1 cut(s)	930
BstKTI	GATC	6 cut(s)	486, 697, 836, 1021, 1108, 1441
BstMAI	GTCTC	1 cut(s)	1474
BstMBI	GATC	6 cut(s)	483, 694, 833, 1018, 1105, 1438
BstMCI	CGRYCG	1 cut(s)	91
BstNI	CCWGG	2 cut(s)	632, 1458
BstSCI	CCNGG	2 cut(s)	630, 1456
BstSFI	CTRYAG	1 cut(s)	870
BstSLI	GKGCMC	1 cut(s)	755
BstUI	CGCG	1 cut(s)	179
BstX2I	RGATCY	1 cut(s)	833
BstYI	RGATCY	1 cut(s)	833
BstZI	CGGCCG	1 cut(s)	88
BtgZI	GCGATG	1 cut(s)	194
BtrI	CACGTC	1 cut(s)	999
BtsCI	GGATG	5 cut(s)	557, 899, 1076, 1198, 1393
BtsI	GCAGTG	2 cut(s)	879, 1161
BtsIMutI	CAGTG	3 cut(s)	879, 905, 1161
BtuMI	TCGCGA	1 cut(s)	179
Cac8I	GCNNGC	8 cut(s)	211, 559, 613, 649, 793, 932, 974, 1083
CaiI	CAGNNNCTG	3 cut(s)	26, 431, 617
CciI	TCATGA	1 cut(s)	697
CciNI	GCGGCCGC	1 cut(s)	88
CfoI	GCGC	1 cut(s)	930
Cfr10I	RCCGGY	2 cut(s)	209, 687
Cfr13I	GGNCC	1 cut(s)	674
CseI	GACGC	1 cut(s)	272
CsiI	ACCWGGT	1 cut(s)	630
CviAII	CATG	6 cut(s)	199, 235, 698, 1130, 1146, 1400
DdeI	CTNAG	5 cut(s)	19, 375, 898, 1009, 1086
DpnI	GATC	6 cut(s)	485, 696, 835, 1020, 1107, 1440
DpnII	GATC	6 cut(s)	483, 694, 833, 1018, 1105, 1438
EaeI	YGGCCR	1 cut(s)	88
EagI	CGGCCG	1 cut(s)	88
Eam1104I	CTCTTC	2 cut(s)	161, 287
EarI	CTCTTC	2 cut(s)	161, 287
EclXI	CGGCCG	1 cut(s)	88
Eco130I	CCWWGG	2 cut(s)	306, 1022
Eco147I	AGGCCT	1 cut(s)	818
Eco31I	GGTCTC	1 cut(s)	1474
Eco47III	AGCGCT	1 cut(s)	929
Eco52I	CGGCCG	1 cut(s)	88
EcoO109I	RGGNCCY	1 cut(s)	674
EcoRII	CCWGG	2 cut(s)	630, 1456
EcoT14I	CCWWGG	2 cut(s)	306, 1022
ErhI	CCWWGG	2 cut(s)	306, 1022
FaeI	CATG	6 cut(s)	202, 238, 701, 1133, 1149, 1403
FatI	CATG	6 cut(s)	198, 234, 697, 1129, 1145, 1399
FauI	CCCGC	2 cut(s)	686, 974
FauNDI	CATATG	1 cut(s)	1225
FblI	GTMKAC	1 cut(s)	513
FokI	GGATG	5 cut(s)	564, 906, 1083, 1205, 1400
GlaI	GCGC	1 cut(s)	929
HaeII	RGCGCY	1 cut(s)	931
HapII	CCGG	4 cut(s)	210, 688, 939, 1442
HgaI	GACGC	1 cut(s)	272
HhaI	GCGC	1 cut(s)	930
Hin1II	CATG	6 cut(s)	202, 238, 701, 1133, 1149, 1403
Hin6I	GCGC	1 cut(s)	928
HinP1I	GCGC	1 cut(s)	928
HincII	GTYRAC	2 cut(s)	121, 139
HindII	GTYRAC	2 cut(s)	121, 139
HindIII	AAGCTT	1 cut(s)	1079
HinfI	GANTC	2 cut(s)	435, 715
HpaII	CCGG	4 cut(s)	210, 688, 939, 1442
HphI	GGTGA	4 cut(s)	241, 620, 946, 1297
Hpy166II	GTNNAC	5 cut(s)	121, 139, 514, 628, 725
Hpy188I	TCNGA	3 cut(s)	28, 1278, 1366
Hpy188III	TCNNGA	4 cut(s)	178, 499, 698, 1351
Hpy8I	GTNNAC	5 cut(s)	121, 139, 514, 628, 725
Hpy99I	CGWCG	1 cut(s)	962
HpyAV	CCTTC	4 cut(s)	161, 381, 665, 695
HpyCH4III	ACNGT	1 cut(s)	392
HpyCH4IV	ACGT	2 cut(s)	960, 998
HpyF3I	CTNAG	5 cut(s)	19, 375, 898, 1009, 1086
HpySE526I	ACGT	2 cut(s)	960, 998
Hsp92II	CATG	6 cut(s)	202, 238, 701, 1133, 1149, 1403
HspAI	GCGC	1 cut(s)	928
KroI	GCCGGC	1 cut(s)	209
KroNI	GCCGGC	1 cut(s)	211
Kzo9I	GATC	6 cut(s)	483, 694, 833, 1018, 1105, 1438
LmnI	GCTCC	1 cut(s)	1486
LweI	GCATC	4 cut(s)	88, 171, 884, 1061
MabI	ACCWGGT	1 cut(s)	630
MaeII	ACGT	2 cut(s)	960, 998
MaeIII	GTNAC	3 cut(s)	392, 874, 1390
MalI	GATC	6 cut(s)	485, 696, 835, 1020, 1107, 1440
MboI	GATC	6 cut(s)	483, 694, 833, 1018, 1105, 1438
MboII	GAAGA	4 cut(s)	148, 274, 876, 1439
MflI	RGATCY	1 cut(s)	833
MhlI	GDGCHC	2 cut(s)	664, 755
MluCI	AATT	2 cut(s)	467, 1152
MlyI	GAGTC	1 cut(s)	724
MmeI	TCCRAC	2 cut(s)	58, 616
MroNI	GCCGGC	1 cut(s)	209
MseI	TTAA	1 cut(s)	360
MspA1I	CMGCKG	3 cut(s)	53, 428, 1496
MspI	CCGG	4 cut(s)	210, 688, 939, 1442
MspR9I	CCNGG	2 cut(s)	632, 1458
Mva1269I	GAATGC	1 cut(s)	1436
MvaI	CCWGG	2 cut(s)	632, 1458
MvnI	CGCG	1 cut(s)	179
NaeI	GCCGGC	1 cut(s)	211
NdeI	CATATG	1 cut(s)	1225
NdeII	GATC	6 cut(s)	483, 694, 833, 1018, 1105, 1438
NgoMIV	GCCGGC	1 cut(s)	209
NlaIII	CATG	6 cut(s)	202, 238, 701, 1133, 1149, 1403
NlaIV	GGNNCC	5 cut(s)	319, 448, 676, 835, 950
NmeAIII	GCCGAG	1 cut(s)	168
NmuCI	GTSAC	2 cut(s)	874, 1390
NotI	GCGGCCGC	1 cut(s)	88
NruI	TCGCGA	1 cut(s)	179
PagI	TCATGA	1 cut(s)	697
PceI	AGGCCT	1 cut(s)	818
PctI	GAATGC	1 cut(s)	1436
PdiI	GCCGGC	1 cut(s)	211
PfeI	GAWTC	1 cut(s)	435
PleI	GAGTC	1 cut(s)	723
PpsI	GAGTC	1 cut(s)	723
Psp6I	CCWGG	2 cut(s)	630, 1456
PspGI	CCWGG	2 cut(s)	630, 1456
PspN4I	GGNNCC	5 cut(s)	319, 448, 676, 835, 950
PspPI	GGNCC	1 cut(s)	674
PstI	CTGCAG	1 cut(s)	874
PstNI	CAGNNNCTG	3 cut(s)	26, 431, 617
PsuI	RGATCY	1 cut(s)	833
PvuII	CAGCTG	3 cut(s)	53, 428, 1496
RruI	TCGCGA	1 cut(s)	179
SaqAI	TTAA	1 cut(s)	360
Sau3AI	GATC	6 cut(s)	483, 694, 833, 1018, 1105, 1438
Sau96I	GGNCC	1 cut(s)	674
SchI	GAGTC	1 cut(s)	724
ScrFI	CCNGG	2 cut(s)	632, 1458
SduI	GDGCHC	2 cut(s)	664, 755
SexAI	ACCWGGT	1 cut(s)	630
SfaNI	GCATC	4 cut(s)	88, 171, 884, 1061
SfcI	CTRYAG	1 cut(s)	870
SmlI	CTYRAG	3 cut(s)	812, 1351, 1471
SmoI	CTYRAG	3 cut(s)	812, 1351, 1471
Sse9I	AATT	2 cut(s)	467, 1152
SseBI	AGGCCT	1 cut(s)	818
SsiI	CCGC	8 cut(s)	66, 72, 87, 91, 276, 679, 732, 981
StuI	AGGCCT	1 cut(s)	818
StyD4I	CCNGG	2 cut(s)	630, 1456
StyI	CCWWGG	2 cut(s)	306, 1022
TaaI	ACNGT	1 cut(s)	392
TaiI	ACGT	2 cut(s)	963, 1001
TaqI	TCGA	4 cut(s)	107, 384, 669, 693
TasI	AATT	2 cut(s)	467, 1152
TauI	GCSGC	5 cut(s)	74, 90, 93, 279, 735
TfiI	GAWTC	1 cut(s)	435
Tru1I	TTAA	1 cut(s)	360
Tru9I	TTAA	1 cut(s)	360
TscAI	CASTG	3 cut(s)	879, 912, 1168
TseFI	GTSAC	2 cut(s)	874, 1390
Tsp45I	GTSAC	2 cut(s)	874, 1390
TspDTI	ATGAA	7 cut(s)	251, 325, 480, 714, 1118, 1209, 1350
TspRI	CASTG	3 cut(s)	879, 912, 1168
XcmI	CCANNNNNNNNNTGG	1 cut(s)	350
XmiI	GTMKAC	1 cut(s)	513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.