Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0016519

Physical Location & Seq

Genomic Coordinates Forward (+)

21609692 .. 21611173

Gene Structure 1482 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00182520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGGCGGCCATCACTTGCTCCGCCTCGGACCTCCAGCCCCTCCTGGGCGGCTCCAACGCCACCGCTGCTGCAGAATACATCTGCGGCCGCTTTGGTGCCGTGTCGAACAAGTTTGTCGACACGGGCTATGCAGTTGACAACACGTATCTTCTCTTCTCTGCCTATCTTGTTTTCGCCATGCAGCTCGGCTTTGCAATGCTCTGCGCCGGCTCCGTTCGTGCCAAAAACACCATGAACATTATGCTCACCAATGTCCTCGACGCCGCCACCGGCGGCATCTTCTACTATCTTTTCGGTTTTGCCTTCGCCTTTGGAACTCCCTCCAATGGCTTCATTGGCAAGCAATTCTTTGGTCTCAGCCATTTTCCTTCCCCCTCTTTCGACTACGGCTACTTCCTCTACCAATGGGCCTTTGCCATTGCGGCTGCCGGAATCACTAGTGGTTCGATCGCCGAACGGACCCAATTCGTGGCCTATTTGATATACTCCTCTTTCTTGACCGGATTTGTGTACCCGATTGTGTCACATTGGTTTTGGTCAGCAGATGGATGGGCTAGCCCTGCTCGTGCTGAGAATCTCTTGTTTGGATCTGGTGTGATTGACTTTGCAGGCTCCGGAGTTGTGCACTTGGTCGGAGGCATTGCCGGTTTGTGGGGTGCCCTGATCGAGGGGCCTAGGATCGGCCGGTTTGATCATGAAGGCCGGTCCGTGTTAATGCGCGGACATAGTGGCACATTGGTTGTTTTGGGCACATTTTTGTTATGGTTTGGTTGGTATGGTTTCAATGCAGGGTCATTTCTCAACATATTGAAGGTTTATGGTGAAAGTGGATCATACTATGGACAATGGAGCTCTGTGGGCCGGACTGCCGTGACAACCACCTTGGCCGGATGCTCGGCGGCATTGACTACCCTCTTCGGAAAGCGCCTGCTCTCCGGGCACTGGAATGTCACTGATGTGTGCAATGGTTTGCTTGGGGGGTTCGCAGCAATCACATCTGGCTGCTCAGTGGTTGATCCTTGGGCAGCAATTATTTGTGGGATTGTAGCGGCTTGGGTTTTAATCGGGTGCAACAAGCTTGCCGAGAAGTTGAAGTATGACGACCCTTTGGAGGCTGCACAGCTTCATGGAGGGTGTGGTACGTGGGGGATCATATTCACGGCCTTGTTTGCCAAGAAGGCTTATGTGAATGAGGTCTATCCAGGGCACCCGGAGAGGCCATTTGGGCTGTTTATGGGAGGCGGTGCCAAACTGTTGGCTGCGCATTTGGTGCAGATTGTGGTGGTTGCTGTGTTTGTGAGTGTGACGATGGGGACATTGTTTTTCTTGCTGCACAAGTTGAAGCTGTTGAGGATTTCATCAGACGAGGAAATGGCAGGAATGGATGTGACGAGTCATGGAGGATTGGCTTATGTCTATACTGATGAAAGTGACCTAAAATCTGGATATATGGTGTCTAACACTGGTCCTCCACATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008519 GO:0009506 GO:0015075 GO:0015291 GO:0015398 GO:0015695 GO:0015696 GO:0016020 GO:0016021 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0031226 GO:0034220 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072488 GO:0098655

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ammonium_transp

Protein Analysis

493

Amino Acids

52.57

Weight (kDa)

6.45

Isoelectric Point (pI)

18.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ammonium_transp	PF00909	49 - 471	9.8e-129	Ammonium Transporter Family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016519)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28700
fragaria_vesca	FvH4_2g20250
malus_domestica	MD05G1186200.v1.1
prunus_persica	Prupe.1G573000_v2.0.a1 Prupe.8G213000_v2.0.a1
pyrus_communis	pycom05g17070
rosa_chinensis	RchiOBHm_Chr6g0286021
rosa_laevigata	RLG00000012589
rosa_roxburghii	Rroxscaffold_7G00182520
rosa_rugosa	Rorug06G0178300
rosa_samantha	Rh6AG290300 Rh6CG293300 Rh6DG285400
rosa_wichuraiana	Rw6G025020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1263
AccB1I	GGYRCC	4 cut(s)	95, 656, 1206, 1244
AccB7I	CCANNNNNTGG	1 cut(s)	469
AccI	GTMKAC	1 cut(s)	117
AccII	CGCG	1 cut(s)	720
AccIII	TCCGGA	1 cut(s)	614
AclWI	GGATC	5 cut(s)	595, 686, 838, 1010, 1157
AcoI	YGGCCR	4 cut(s)	6, 85, 682, 885
AcyI	GRCGYC	1 cut(s)	261
AfaI	GTAC	2 cut(s)	512, 1141
AfiI	CCNNNNNNNGG	8 cut(s)	44, 326, 469, 651, 667, 680, 942, 1111
AflIII	ACRYGT	2 cut(s)	141, 1474
AgsI	TTSAA	4 cut(s)	784, 811, 1093, 1342
AhlI	ACTAGT	1 cut(s)	437
AjnI	CCWGG	2 cut(s)	42, 1201
AleI	CACNNNNGTG	1 cut(s)	956
AluBI	AGCT	5 cut(s)	184, 852, 1078, 1123, 1345
AluI	AGCT	5 cut(s)	184, 852, 1078, 1123, 1345
Alw21I	GWGCWC	2 cut(s)	627, 854
Alw26I	GTCTC	1 cut(s)	359
Alw44I	GTGCAC	1 cut(s)	623
AlwI	GGATC	5 cut(s)	595, 686, 838, 1010, 1157
Aor13HI	TCCGGA	1 cut(s)	614
ApaLI	GTGCAC	1 cut(s)	623
AspA2I	CCTAGG	1 cut(s)	674
AspLEI	GCGC	4 cut(s)	206, 720, 927, 1264
AspS9I	GGNCC	7 cut(s)	28, 408, 459, 671, 705, 859, 1466
AsuC2I	CCSGG	2 cut(s)	937, 1211
AsuHPI	GGTGA	2 cut(s)	238, 833
AsuNHI	GCTAGC	1 cut(s)	554
AvaII	GGWCC	4 cut(s)	28, 459, 705, 1466
AvrII	CCTAGG	1 cut(s)	674
BaeGI	GKGCMC	5 cut(s)	627, 661, 752, 942, 1209
BanI	GGYRCC	4 cut(s)	95, 656, 1206, 1244
BanII	GRGCYC	1 cut(s)	854
BarI	GAAGNNNNNNTAC	2 cut(s)	137, 169
BauI	CACGAG	1 cut(s)	564
Bbv12I	GWGCWC	2 cut(s)	627, 854
BccI	CCATC	4 cut(s)	17, 539, 543, 1303
BceAI	ACGGC	4 cut(s)	83, 403, 854, 1176
BciT130I	CCWGG	2 cut(s)	44, 1203
BclI	TGATCA	1 cut(s)	691
BcnI	CCSGG	2 cut(s)	937, 1211
BcoDI	GTCTC	1 cut(s)	359
BcuI	ACTAGT	1 cut(s)	437
BfaI	CTAG	3 cut(s)	438, 555, 675
BfmI	CTRYAG	1 cut(s)	69
BfoI	RGCGCY	1 cut(s)	928
BglI	GCCNNNNNGGC	3 cut(s)	422, 1178, 1225
BlnI	CCTAGG	1 cut(s)	674
Bme1390I	CCNGG	4 cut(s)	44, 937, 1203, 1211
Bme18I	GGWCC	4 cut(s)	28, 459, 705, 1466
BmgT120I	GGNCC	7 cut(s)	28, 408, 459, 671, 705, 859, 1466
BmiI	GGNNCC	9 cut(s)	52, 97, 211, 461, 613, 658, 672, 1208, 1246
BmrFI	CCNGG	4 cut(s)	44, 937, 1203, 1211
BmsI	GCATC	2 cut(s)	285, 881
BmtI	GCTAGC	1 cut(s)	558
BpmI	CTGGAG	1 cut(s)	17
BpuMI	CCSGG	2 cut(s)	937, 1211
BsaAI	YACGTR	2 cut(s)	144, 1143
BsaHI	GRCGYC	1 cut(s)	261
BsaI	GGTCTC	1 cut(s)	359
BsaJI	CCNNGG	6 cut(s)	24, 43, 674, 882, 1019, 1202
BsaWI	WCCGGW	2 cut(s)	500, 614
BsaXI	ACNNNNNCTCC	1 cut(s)	1453
Bsc4I	CCNNNNNNNGG	8 cut(s)	44, 326, 469, 651, 667, 680, 942, 1111
Bse118I	RCCGGY	5 cut(s)	206, 269, 644, 684, 702
Bse1I	ACTGG	2 cut(s)	947, 1468
Bse3DI	GCAATG	4 cut(s)	201, 417, 639, 970
BseAI	TCCGGA	1 cut(s)	614
BseBI	CCWGG	2 cut(s)	44, 1203
BseDI	CCNNGG	6 cut(s)	24, 43, 674, 882, 1019, 1202
BseGI	GGATG	3 cut(s)	554, 896, 1390
BseLI	CCNNNNNNNGG	8 cut(s)	44, 326, 469, 651, 667, 680, 942, 1111
BseMI	GCAATG	4 cut(s)	201, 417, 639, 970
BseMII	CTCAG	3 cut(s)	370, 561, 1020
BseNI	ACTGG	2 cut(s)	947, 1468
BseRI	GAGGAG	1 cut(s)	478
BseSI	GKGCMC	5 cut(s)	627, 661, 752, 942, 1209
BseX3I	CGGCCG	2 cut(s)	85, 682
BsgI	GTGCAG	3 cut(s)	1101, 1292, 1316
Bsh1236I	CGCG	1 cut(s)	720
Bsh1285I	CGRYCG	3 cut(s)	88, 450, 685
BshNI	GGYRCC	4 cut(s)	95, 656, 1206, 1244
BsiEI	CGRYCG	3 cut(s)	88, 450, 685
BsiHKAI	GWGCWC	2 cut(s)	627, 854
BslFI	GGGAC	1 cut(s)	1327
BslI	CCNNNNNNNGG	8 cut(s)	44, 326, 469, 651, 667, 680, 942, 1111
BsmAI	GTCTC	1 cut(s)	359
BsmFI	GGGAC	1 cut(s)	1327
Bso31I	GGTCTC	1 cut(s)	359
Bsp1286I	GDGCHC	6 cut(s)	627, 661, 752, 854, 942, 1209
Bsp13I	TCCGGA	1 cut(s)	614
Bsp143I	GATC	8 cut(s)	447, 587, 663, 678, 691, 830, 1015, 1149
BspCNI	CTCAG	3 cut(s)	369, 562, 1019
BspEI	TCCGGA	1 cut(s)	614
BspFNI	CGCG	1 cut(s)	720
BspHI	TCATGA	1 cut(s)	694
BspLI	GGNNCC	9 cut(s)	52, 97, 211, 461, 613, 658, 672, 1208, 1246
BspMAI	CTGCAG	1 cut(s)	73
BspOI	GCTAGC	1 cut(s)	558
BspPI	GGATC	5 cut(s)	595, 686, 838, 1010, 1157
BspT107I	GGYRCC	4 cut(s)	95, 656, 1206, 1244
BspTNI	GGTCTC	1 cut(s)	359
BsrDI	GCAATG	4 cut(s)	201, 417, 639, 970
BsrFI	RCCGGY	5 cut(s)	206, 269, 644, 684, 702
BsrI	ACTGG	2 cut(s)	947, 1468
BssAI	RCCGGY	5 cut(s)	206, 269, 644, 684, 702
BssECI	CCNNGG	6 cut(s)	24, 43, 674, 882, 1019, 1202
BssMI	GATC	8 cut(s)	447, 587, 663, 678, 691, 830, 1015, 1149
BssNI	GRCGYC	1 cut(s)	261
BssSI	CACGAG	1 cut(s)	564
BssT1I	CCWWGG	3 cut(s)	674, 882, 1019
Bst2BI	CACGAG	1 cut(s)	564
Bst2UI	CCWGG	2 cut(s)	44, 1203
Bst4CI	ACNGT	1 cut(s)	1254
Bst6I	CTCTTC	2 cut(s)	158, 920
BstACI	GRCGYC	1 cut(s)	261
BstAPI	GCANNNNNTGC	1 cut(s)	1270
BstBAI	YACGTR	2 cut(s)	144, 1143
BstC8I	GCNNGC	6 cut(s)	208, 341, 556, 610, 929, 1080
BstDEI	CTNAG	3 cut(s)	356, 570, 1006
BstENI	CCTNNNNNAGG	1 cut(s)	665
BstF5I	GGATG	3 cut(s)	554, 896, 1390
BstFNI	CGCG	1 cut(s)	720
BstH2I	RGCGCY	1 cut(s)	928
BstHHI	GCGC	4 cut(s)	206, 720, 927, 1264
BstKTI	GATC	8 cut(s)	450, 590, 666, 681, 694, 833, 1018, 1152
BstMAI	GTCTC	1 cut(s)	359
BstMBI	GATC	8 cut(s)	447, 587, 663, 678, 691, 830, 1015, 1149
BstMCI	CGRYCG	3 cut(s)	88, 450, 685
BstNI	CCWGG	2 cut(s)	44, 1203
BstNSI	RCATGY	1 cut(s)	1478
BstSCI	CCNGG	4 cut(s)	42, 935, 1201, 1209
BstSFI	CTRYAG	1 cut(s)	69
BstSLI	GKGCMC	5 cut(s)	627, 661, 752, 942, 1209
BstUI	CGCG	1 cut(s)	720
BstX2I	RGATCY	1 cut(s)	587
BstXI	CCANNNNNNTGG	1 cut(s)	1255
BstYI	RGATCY	1 cut(s)	587
BstZI	CGGCCG	2 cut(s)	85, 682
BtsCI	GGATG	3 cut(s)	554, 896, 1390
BtsIMutI	CAGTG	4 cut(s)	940, 951, 1014, 1461
Cac8I	GCNNGC	6 cut(s)	208, 341, 556, 610, 929, 1080
CciI	TCATGA	1 cut(s)	694
CciNI	GCGGCCGC	1 cut(s)	85
CfoI	GCGC	4 cut(s)	206, 720, 927, 1264
Cfr10I	RCCGGY	5 cut(s)	206, 269, 644, 684, 702
Cfr13I	GGNCC	7 cut(s)	28, 408, 459, 671, 705, 859, 1466
CpoI	CGGWCCG	1 cut(s)	705
CseI	GACGC	1 cut(s)	269
Csp6I	GTAC	2 cut(s)	511, 1140
CspI	CGGWCCG	1 cut(s)	705
CviAII	CATG	6 cut(s)	178, 232, 695, 1127, 1397, 1475
CviQI	GTAC	2 cut(s)	511, 1140
DdeI	CTNAG	3 cut(s)	356, 570, 1006
DpnI	GATC	8 cut(s)	449, 589, 665, 680, 693, 832, 1017, 1151
DpnII	GATC	8 cut(s)	447, 587, 663, 678, 691, 830, 1015, 1149
EaeI	YGGCCR	4 cut(s)	6, 85, 682, 885
EagI	CGGCCG	2 cut(s)	85, 682
Eam1104I	CTCTTC	2 cut(s)	158, 920
EarI	CTCTTC	2 cut(s)	158, 920
EciI	GGCGGA	1 cut(s)	10
Ecl136II	GAGCTC	1 cut(s)	852
EclXI	CGGCCG	2 cut(s)	85, 682
Eco130I	CCWWGG	3 cut(s)	674, 882, 1019
Eco24I	GRGCYC	1 cut(s)	854
Eco31I	GGTCTC	1 cut(s)	359
Eco47I	GGWCC	4 cut(s)	28, 459, 705, 1466
Eco52I	CGGCCG	2 cut(s)	85, 682
Eco53kI	GAGCTC	1 cut(s)	852
EcoICRI	GAGCTC	1 cut(s)	852
EcoNI	CCTNNNNNAGG	1 cut(s)	665
EcoO109I	RGGNCCY	1 cut(s)	671
EcoRII	CCWGG	2 cut(s)	42, 1201
EcoT14I	CCWWGG	3 cut(s)	674, 882, 1019
EcoT38I	GRGCYC	1 cut(s)	854
ErhI	CCWWGG	3 cut(s)	674, 882, 1019
FaeI	CATG	6 cut(s)	181, 235, 698, 1130, 1400, 1478
FalI	AAGNNNNNCTT	2 cut(s)	332, 364
FaqI	GGGAC	1 cut(s)	1327
FatI	CATG	6 cut(s)	177, 231, 694, 1126, 1396, 1474
FbaI	TGATCA	1 cut(s)	691
FblI	GTMKAC	1 cut(s)	117
FokI	GGATG	3 cut(s)	561, 903, 1397
FriOI	GRGCYC	1 cut(s)	854
FspBI	CTAG	3 cut(s)	438, 555, 675
FspI	TGCGCA	1 cut(s)	1263
GlaI	GCGC	4 cut(s)	205, 719, 926, 1263
GsuI	CTGGAG	1 cut(s)	17
HaeII	RGCGCY	1 cut(s)	928
HgaI	GACGC	1 cut(s)	269
HhaI	GCGC	4 cut(s)	206, 720, 927, 1264
Hin1I	GRCGYC	1 cut(s)	261
Hin1II	CATG	6 cut(s)	181, 235, 698, 1130, 1400, 1478
Hin6I	GCGC	4 cut(s)	204, 718, 925, 1262
HinP1I	GCGC	4 cut(s)	204, 718, 925, 1262
HincII	GTYRAC	2 cut(s)	118, 136
HindII	GTYRAC	2 cut(s)	118, 136
HindIII	AAGCTT	1 cut(s)	1076
HinfI	GANTC	3 cut(s)	432, 574, 1393
HphI	GGTGA	2 cut(s)	238, 833
Hpy166II	GTNNAC	4 cut(s)	118, 136, 511, 625
Hpy188I	TCNGA	4 cut(s)	28, 635, 920, 1363
Hpy188III	TCNNGA	4 cut(s)	496, 615, 695, 1443
Hpy8I	GTNNAC	4 cut(s)	118, 136, 511, 625
Hpy99I	CGWCG	1 cut(s)	263
HpyAV	CCTTC	5 cut(s)	313, 378, 692, 805, 1171
HpyCH4III	ACNGT	1 cut(s)	1254
HpyCH4IV	ACGT	2 cut(s)	143, 1142
HpyF3I	CTNAG	3 cut(s)	356, 570, 1006
HpySE526I	ACGT	2 cut(s)	143, 1142
Hsp92I	GRCGYC	1 cut(s)	261
Hsp92II	CATG	6 cut(s)	181, 235, 698, 1130, 1400, 1478
HspAI	GCGC	4 cut(s)	204, 718, 925, 1262
Kpn2I	TCCGGA	1 cut(s)	614
KroI	GCCGGC	1 cut(s)	206
KroNI	GCCGGC	1 cut(s)	208
Ksp22I	TGATCA	1 cut(s)	691
Kzo9I	GATC	8 cut(s)	447, 587, 663, 678, 691, 830, 1015, 1149
LmnI	GCTCC	5 cut(s)	23, 56, 215, 617, 849
LweI	GCATC	2 cut(s)	285, 881
MaeI	CTAG	3 cut(s)	438, 555, 675
MaeII	ACGT	2 cut(s)	143, 1142
MaeIII	GTNAC	6 cut(s)	522, 871, 949, 1303, 1387, 1430
MalI	GATC	8 cut(s)	449, 589, 665, 680, 693, 832, 1017, 1151
MboI	GATC	8 cut(s)	447, 587, 663, 678, 691, 830, 1015, 1149
MboII	GAAGA	4 cut(s)	140, 145, 271, 907
MflI	RGATCY	1 cut(s)	587
MhlI	GDGCHC	6 cut(s)	627, 661, 752, 854, 942, 1209
MluCI	AATT	3 cut(s)	344, 464, 1029
MlyI	GAGTC	1 cut(s)	1402
MmeI	TCCRAC	2 cut(s)	78, 613
MroI	TCCGGA	1 cut(s)	614
MroNI	GCCGGC	1 cut(s)	206
MseI	TTAA	2 cut(s)	713, 1061
MslI	CAYNNNNRTG	2 cut(s)	945, 956
MspA1I	CMGCKG	1 cut(s)	65
MspR9I	CCNGG	4 cut(s)	44, 937, 1203, 1211
MvaI	CCWGG	2 cut(s)	44, 1203
MvnI	CGCG	1 cut(s)	720
NaeI	GCCGGC	1 cut(s)	208
NciI	CCSGG	2 cut(s)	937, 1211
NdeII	GATC	8 cut(s)	447, 587, 663, 678, 691, 830, 1015, 1149
NgoMIV	GCCGGC	1 cut(s)	206
NheI	GCTAGC	1 cut(s)	554
NlaIII	CATG	6 cut(s)	181, 235, 698, 1130, 1400, 1478
NlaIV	GGNNCC	9 cut(s)	52, 97, 211, 461, 613, 658, 672, 1208, 1246
NmeAIII	GCCGAG	3 cut(s)	165, 875, 1108
NmuCI	GTSAC	6 cut(s)	522, 871, 949, 1303, 1387, 1430
NotI	GCGGCCGC	1 cut(s)	85
NsbI	TGCGCA	1 cut(s)	1263
NspI	RCATGY	1 cut(s)	1478
OliI	CACNNNNGTG	1 cut(s)	956
PagI	TCATGA	1 cut(s)	694
PciI	ACATGT	1 cut(s)	1474
PdiI	GCCGGC	1 cut(s)	208
PfeI	GAWTC	2 cut(s)	432, 574
PflMI	CCANNNNNTGG	1 cut(s)	469
Ple19I	CGATCG	1 cut(s)	450
PleI	GAGTC	1 cut(s)	1401
PpsI	GAGTC	1 cut(s)	1401
Ppu21I	YACGTR	2 cut(s)	144, 1143
PscI	ACATGT	1 cut(s)	1474
Psp124BI	GAGCTC	1 cut(s)	854
Psp6I	CCWGG	2 cut(s)	42, 1201
PspGI	CCWGG	2 cut(s)	42, 1201
PspN4I	GGNNCC	9 cut(s)	52, 97, 211, 461, 613, 658, 672, 1208, 1246
PspPI	GGNCC	7 cut(s)	28, 408, 459, 671, 705, 859, 1466
PstI	CTGCAG	1 cut(s)	73
PsuI	RGATCY	1 cut(s)	587
PvuI	CGATCG	1 cut(s)	450
RsaI	GTAC	2 cut(s)	512, 1141
RsaNI	GTAC	2 cut(s)	511, 1140
RseI	CAYNNNNRTG	2 cut(s)	945, 956
Rsr2I	CGGWCCG	1 cut(s)	705
RsrII	CGGWCCG	1 cut(s)	705
SacI	GAGCTC	1 cut(s)	854
SalI	GTCGAC	1 cut(s)	116
SaqAI	TTAA	2 cut(s)	713, 1061
Sau3AI	GATC	8 cut(s)	447, 587, 663, 678, 691, 830, 1015, 1149
Sau96I	GGNCC	7 cut(s)	28, 408, 459, 671, 705, 859, 1466
SchI	GAGTC	1 cut(s)	1402
ScrFI	CCNGG	4 cut(s)	44, 937, 1203, 1211
SduI	GDGCHC	6 cut(s)	627, 661, 752, 854, 942, 1209
SfaNI	GCATC	2 cut(s)	285, 881
SfcI	CTRYAG	1 cut(s)	69
SgrAI	CRCCGGYG	1 cut(s)	269
SinI	GGWCC	4 cut(s)	28, 459, 705, 1466
SmiMI	CAYNNNNRTG	2 cut(s)	945, 956
SpeI	ACTAGT	1 cut(s)	437
Sse9I	AATT	3 cut(s)	344, 464, 1029
SspMI	CTAG	3 cut(s)	438, 555, 675
SstI	GAGCTC	1 cut(s)	854
StyD4I	CCNGG	4 cut(s)	42, 935, 1201, 1209
StyI	CCWWGG	3 cut(s)	674, 882, 1019
TaaI	ACNGT	1 cut(s)	1254
TaiI	ACGT	2 cut(s)	146, 1145
TaqI	TCGA	6 cut(s)	104, 117, 258, 381, 446, 666
TasI	AATT	3 cut(s)	344, 464, 1029
TauI	GCSGC	9 cut(s)	8, 51, 87, 90, 266, 276, 425, 902, 1052
TfiI	GAWTC	2 cut(s)	432, 574
Tru1I	TTAA	2 cut(s)	713, 1061
Tru9I	TTAA	2 cut(s)	713, 1061
TscAI	CASTG	4 cut(s)	947, 958, 1014, 1468
TseFI	GTSAC	6 cut(s)	522, 871, 949, 1303, 1387, 1430
Tsp45I	GTSAC	6 cut(s)	522, 871, 949, 1303, 1387, 1430
TspDTI	ATGAA	6 cut(s)	248, 322, 711, 1115, 1347, 1440
TspGWI	ACGGA	3 cut(s)	202, 472, 697
TspRI	CASTG	4 cut(s)	947, 958, 1014, 1468
Van91I	CCANNNNNTGG	1 cut(s)	469
VneI	GTGCAC	1 cut(s)	623
VpaK11BI	GGWCC	4 cut(s)	28, 459, 705, 1466
XagI	CCTNNNNNAGG	1 cut(s)	665
XceI	RCATGY	1 cut(s)	1478
XmaJI	CCTAGG	1 cut(s)	674
XmiI	GTMKAC	1 cut(s)	117
XspI	CTAG	3 cut(s)	438, 555, 675

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.