Prupe.1G578700_v2.0.a1

Protein of unknown function (DUF679)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
47089101 .. 47089790
690 bp
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UTR
Exon/CDS
Intron
Prupe.1G578700.1

Sequence Viewer

Length: 690 bp
ATGTCTCTTAGACCAAGACCAACACCTACCAAGCAACCATCGATATCAGATGCAGTTTCCATTACTACCAACCCACCAACCTCCACCACCAGCTCCGAATCGGAACCTGACACCCCGAAAAGCCCTCAACTACCACAACCCACCCTCTCCCAACGTGCCATCTCCCAAACCCTAACAAGCACAGCAAACCTAGCCAACCTCCTCCCAACAGGCACCCTCCTCGCCTTCCAACTCCTCACCCCAATCTTCACCAGCAACGGCTCTTGTGACTCCGCCACGCGCCCCATGACCCTCATCCTGCTCCTCCTCTTTGCCCTCTCATGTTTCATCGCGTCCCTCACCGACAGCGTCAAGGCCTCTGATGGACAAGTTTACTACGGCCTGGCAACGACCAAGGGGTTATTTTTGTTTGACTACCCGGATGCCTCAGGTTCAGGTCTGCCTGATTTGAGCAAGTACAAGATAAGGTTCATGGATTTGGTTCATGCAGTTTTGTCCGTGTTTGTGTTTGGAGCTGTGGCTTTGAGGGACAAGAATGTTGTGGGGTGCTTCTACCCTACGCCTGGGCGTGAGACTCAGGAGGTTTTAGACATTGTTCCAGTTGGTATTGGGCTTATTTGCAGCTTGCTGTTTGTGGTCTTCCCCACCAAAAGACACGGCATTGGATACCCTCTTACATCTGGCAAATAA

Protein Analysis

230

Amino Acids

24.46

Weight (kDa)

8.35

Isoelectric Point (pI)

37.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016605)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24310
fragaria_vesca FvH4_5g26430
malus_domestica MD15G1434600.v1.1
prunus_persica Prupe.1G578700_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0220711
rosa_laevigata RLG00000002202
rosa_multiflora Rmu_sc0001286.1_g000016
rosa_roxburghii Rroxscaffold_3G00239120
rosa_rugosa Rorug07G0196900
rosa_samantha Rh7AG337300 Rh7BG328200 Rh7CG355400 Rh7DG334000
rosa_wichuraiana Rw7G028780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 212
AccII CGCG 2 cut(s) 280, 332
AciI CCGC 1 cut(s) 273
AfaI GTAC 1 cut(s) 458
AfiI CCNNNNNNNGG 1 cut(s) 563
AjnI CCWGG 2 cut(s) 381, 562
AluBI AGCT 3 cut(s) 93, 515, 624
AluI AGCT 3 cut(s) 93, 515, 624
Alw26I GTCTC 2 cut(s) 9, 566
AoxI GGCC 2 cut(s) 354, 379
ApeKI GCWGC 1 cut(s) 621
AspLEI GCGC 1 cut(s) 282
AsuC2I CCSGG 1 cut(s) 419
AsuHPI GGTGA 3 cut(s) 229, 241, 331
AxyI CCTNAGG 1 cut(s) 427
BanI GGYRCC 1 cut(s) 212
BbsI GAAGAC 1 cut(s) 631
BbvI GCAGC 1 cut(s) 633
BccI CCATC 3 cut(s) 46, 167, 356
BceAI ACGGC 3 cut(s) 274, 394, 673
BcgI CGANNNNNNTGC 2 cut(s) 202, 236
BciT130I CCWGG 2 cut(s) 383, 564
BciVI GTATCC 1 cut(s) 659
BcnI CCSGG 1 cut(s) 419
BcoDI GTCTC 2 cut(s) 9, 566
BfaI CTAG 1 cut(s) 191
BfuI GTATCC 1 cut(s) 659
BisI GCNGC 1 cut(s) 622
BlsI GCNGC 1 cut(s) 623
Bme1390I CCNGG 3 cut(s) 383, 419, 564
BmiI GGNNCC 2 cut(s) 105, 214
BmrFI CCNGG 3 cut(s) 383, 419, 564
BmsI GCATC 2 cut(s) 40, 412
BpiI GAAGAC 1 cut(s) 631
BpuMI CCSGG 1 cut(s) 419
Bsa29I ATCGAT 1 cut(s) 41
BsaJI CCNNGG 2 cut(s) 393, 563
Bsc4I CCNNNNNNNGG 1 cut(s) 563
Bse1I ACTGG 1 cut(s) 599
Bse21I CCTNAGG 1 cut(s) 427
BseBI CCWGG 2 cut(s) 383, 564
BseCI ATCGAT 1 cut(s) 41
BseDI CCNNGG 2 cut(s) 393, 563
BseGI GGATG 2 cut(s) 294, 427
BseLI CCNNNNNNNGG 1 cut(s) 563
BseMII CTCAG 2 cut(s) 441, 590
BseNI ACTGG 1 cut(s) 599
BseRI GAGGAG 5 cut(s) 191, 209, 224, 293, 296
BseXI GCAGC 1 cut(s) 633
Bsh1236I CGCG 2 cut(s) 280, 332
BshFI GGCC 2 cut(s) 356, 381
BshNI GGYRCC 1 cut(s) 212
BshVI ATCGAT 1 cut(s) 41
BsiSI CCGG 1 cut(s) 419
BslFI GGGAC 2 cut(s) 319, 542
BslI CCNNNNNNNGG 1 cut(s) 563
BsmAI GTCTC 2 cut(s) 9, 566
BsmFI GGGAC 2 cut(s) 319, 542
BsnI GGCC 2 cut(s) 356, 381
BspACI CCGC 1 cut(s) 273
BspANI GGCC 2 cut(s) 356, 381
BspCNI CTCAG 2 cut(s) 440, 589
BspDI ATCGAT 1 cut(s) 41
BspFNI CGCG 2 cut(s) 280, 332
BspLI GGNNCC 2 cut(s) 105, 214
BspT107I GGYRCC 1 cut(s) 212
BsrI ACTGG 1 cut(s) 599
BssECI CCNNGG 2 cut(s) 393, 563
BssT1I CCWWGG 1 cut(s) 393
Bst2UI CCWGG 2 cut(s) 383, 564
BstC8I GCNNGC 1 cut(s) 626
BstDEI CTNAG 3 cut(s) 8, 427, 576
BstF5I GGATG 2 cut(s) 294, 427
BstFNI CGCG 2 cut(s) 280, 332
BstHHI GCGC 1 cut(s) 282
BstMAI GTCTC 2 cut(s) 9, 566
BstMWI GCNNNNNNNGC 1 cut(s) 191
BstNI CCWGG 2 cut(s) 383, 564
BstSCI CCNGG 3 cut(s) 381, 417, 562
BstUI CGCG 2 cut(s) 280, 332
BstV1I GCAGC 1 cut(s) 633
BstV2I GAAGAC 1 cut(s) 631
Bsu15I ATCGAT 1 cut(s) 41
Bsu36I CCTNAGG 1 cut(s) 427
BsuI GTATCC 1 cut(s) 659
BsuRI GGCC 2 cut(s) 356, 381
BsuTUI ATCGAT 1 cut(s) 41
BtgZI GCGATG 1 cut(s) 313
BtsCI GGATG 2 cut(s) 294, 427
Cac8I GCNNGC 1 cut(s) 626
CfoI GCGC 1 cut(s) 282
ClaI ATCGAT 1 cut(s) 41
CseI GACGC 2 cut(s) 321, 337
Csp6I GTAC 1 cut(s) 457
CviAII CATG 4 cut(s) 286, 321, 472, 485
CviQI GTAC 1 cut(s) 457
DdeI CTNAG 3 cut(s) 8, 427, 576
EciI GGCGGA 1 cut(s) 262
Eco130I CCWWGG 1 cut(s) 393
Eco147I AGGCCT 1 cut(s) 356
Eco32I GATATC 1 cut(s) 45
Eco81I CCTNAGG 1 cut(s) 427
EcoRII CCWGG 2 cut(s) 381, 562
EcoRV GATATC 1 cut(s) 45
EcoT14I CCWWGG 1 cut(s) 393
ErhI CCWWGG 1 cut(s) 393
FaeI CATG 4 cut(s) 289, 324, 475, 488
FaiI YATR 4 cut(s) 287, 322, 473, 486
FaqI GGGAC 2 cut(s) 319, 542
FatI CATG 4 cut(s) 285, 320, 471, 484
Fnu4HI GCNGC 1 cut(s) 622
FokI GGATG 2 cut(s) 281, 434
Fsp4HI GCNGC 1 cut(s) 622
FspBI CTAG 1 cut(s) 191
GlaI GCGC 1 cut(s) 281
GluI GCNGC 1 cut(s) 622
HaeIII GGCC 2 cut(s) 356, 381
HapII CCGG 1 cut(s) 419
HgaI GACGC 2 cut(s) 321, 337
HhaI GCGC 1 cut(s) 282
Hin1II CATG 4 cut(s) 289, 324, 475, 488
Hin6I GCGC 1 cut(s) 280
HinP1I GCGC 1 cut(s) 280
HinfI GANTC 3 cut(s) 98, 269, 574
HpaII CCGG 1 cut(s) 419
HphI GGTGA 3 cut(s) 229, 241, 331
Hpy166II GTNNAC 1 cut(s) 373
Hpy188I TCNGA 4 cut(s) 49, 97, 103, 361
Hpy188III TCNNGA 1 cut(s) 578
Hpy8I GTNNAC 1 cut(s) 373
HpyAV CCTTC 1 cut(s) 235
HpyCH4IV ACGT 1 cut(s) 154
HpyCH4V TGCA 3 cut(s) 53, 488, 621
HpyF10VI GCNNNNNNNGC 1 cut(s) 191
HpyF3I CTNAG 3 cut(s) 8, 427, 576
HpySE526I ACGT 1 cut(s) 154
Hsp92II CATG 4 cut(s) 289, 324, 475, 488
HspAI GCGC 1 cut(s) 280
LmnI GCTCC 3 cut(s) 98, 306, 512
Lsp1109I GCAGC 1 cut(s) 633
LweI GCATC 2 cut(s) 40, 412
MaeI CTAG 1 cut(s) 191
MaeII ACGT 1 cut(s) 154
MaeIII GTNAC 1 cut(s) 266
MboII GAAGA 2 cut(s) 238, 631
MlyI GAGTC 2 cut(s) 263, 568
MmeI TCCRAC 1 cut(s) 253
MspI CCGG 1 cut(s) 419
MspR9I CCNGG 3 cut(s) 383, 419, 564
MvaI CCWGG 2 cut(s) 383, 564
MvnI CGCG 2 cut(s) 280, 332
MwoI GCNNNNNNNGC 1 cut(s) 191
NciI CCSGG 1 cut(s) 419
NlaIII CATG 4 cut(s) 289, 324, 475, 488
NlaIV GGNNCC 2 cut(s) 105, 214
NmuCI GTSAC 1 cut(s) 266
PceI AGGCCT 1 cut(s) 356
PfeI GAWTC 1 cut(s) 98
PflFI GACNNNGTC 1 cut(s) 347
PkrI GCNGC 1 cut(s) 623
PleI GAGTC 2 cut(s) 263, 568
PpsI GAGTC 2 cut(s) 263, 568
Psp6I CCWGG 2 cut(s) 381, 562
PspGI CCWGG 2 cut(s) 381, 562
PspN4I GGNNCC 2 cut(s) 105, 214
PsyI GACNNNGTC 1 cut(s) 347
RsaI GTAC 1 cut(s) 458
RsaNI GTAC 1 cut(s) 457
SatI GCNGC 1 cut(s) 622
SchI GAGTC 2 cut(s) 263, 568
ScrFI CCNGG 3 cut(s) 383, 419, 564
SfaNI GCATC 2 cut(s) 40, 412
SseBI AGGCCT 1 cut(s) 356
SsiI CCGC 1 cut(s) 273
SspMI CTAG 1 cut(s) 191
StuI AGGCCT 1 cut(s) 356
StyD4I CCNGG 3 cut(s) 381, 417, 562
StyI CCWWGG 1 cut(s) 393
TaiI ACGT 1 cut(s) 157
TaqI TCGA 1 cut(s) 41
TatI WGTACW 1 cut(s) 456
TfiI GAWTC 1 cut(s) 98
TseFI GTSAC 1 cut(s) 266
TseI GCWGC 1 cut(s) 621
Tsp45I GTSAC 1 cut(s) 266
TspDTI ATGAA 3 cut(s) 316, 460, 473
TspGWI ACGGA 1 cut(s) 487
Tth111I GACNNNGTC 1 cut(s) 347
XspI CTAG 1 cut(s) 191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.