Prupe.2G064200_v2.0.a1
MYB Family

Chlorophyll(Ide) b reductase NOL

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
8633999 .. 8640819
6821 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G064200.2

Sequence Viewer

Length: 1062 bp
ATGGCAGTCACCACTTCCATTTCTTCCCCTTCTCTTTCTCCTTTGCTCTTCTCCAAAACCCATCACACCTACTTCCCTCGGCTCGACCCGCACCCAAATTTCTGTAAATTCGACCGTTGCTGTTTACAGACCGTTAGTTCCCGCCAAAACCCTCTTTGCCTGAGTAGCTCTGGCACTTGGGTTTTGAATGCTTCATTGGTAAGAGCAGAAGCCTCTGGGAATGGAAGAGAGCCCATGGTTCCTCCTTACAATGTGCTCATTACAGGTTCAACGAAAGGTATAGGATATGCTCTAGCCAAAGAGTTTCTAAAAGCAGGGGATAACGTCATAATTTGCTCAAGATCAGCTGAGCGGGTTAAATCTGCTGTCCAGAGCCTTAGGGAAGATTTTGGGGAGCAGCGAGTGTGGGGTACTACATGTGATGTTAGAGAAGGGCAGGATGTGAAAGACTTAGTTTCTTTCGCACAGAAAGAACTGAAATACATTGATATATGGATTAATAATGCAGGATCAAATGCATATAGCTTTAAACCACTGTCAGAGGCTTCAGATGAAGATCTCATTGAAGTTGTGACTACGAATGCGCTTGGTTTGATGTTATGTTGCCGTGAGGCAATAAAGATGATGTTAAACCAGCCTCGAGGTGGTCATATTTTCAACATTGATGGAGCTGGTTCTGACGGAAGACCAACCCCGAGGTTTGCTGCATACGGGGCAACAAAGCGTAGTGCGGTGCATTTAACAAAATCATTGCAGGCTGAACTGCAGATGCAGGATGTCAAAAATGTCGCAATGCATAACTTGTCGCCAGGAATGGTTACAACTGATCTTCTCATGTCAGGTGCAACTACGAAGCAGGCGAAGTTTTTCATTAATGTTTTGGCAGAACCACCTGAAGTGGTAGCGGAGTATCTTGTTCCAAATATAAGATCCGTTCCTGCCAATGGATCAATGAAGCCTACATACATTCGTTTCCTTACTGGGATAAAAGCCTACTCCCAGATATTTTCAGTTAAATTTGCTTTCGGTGCAAGAAGAAACAGATATGTTCTTGAAGATTGA

Protein Analysis

354

Amino Acids

38.8

Weight (kDa)

8.94

Isoelectric Point (pI)

41.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 639
AccBSI CCGCTC 1 cut(s) 352
AciI CCGC 5 cut(s) 89, 142, 352, 731, 905
AclWI GGATC 3 cut(s) 517, 924, 955
AcsI RAATTY 3 cut(s) 97, 107, 1016
AcuI CTGAAG 2 cut(s) 531, 915
AfaI GTAC 1 cut(s) 412
AfiI CCNNNNNNNGG 2 cut(s) 644, 944
AflIII ACRYGT 1 cut(s) 416
AgsI TTSAA 5 cut(s) 187, 270, 566, 658, 1055
AjnI CCWGG 1 cut(s) 808
AjuI GAANNNNNNNTTGG 2 cut(s) 179, 211
AluBI AGCT 4 cut(s) 168, 347, 525, 671
AluI AGCT 4 cut(s) 168, 347, 525, 671
Alw21I GWGCWC 1 cut(s) 258
AlwI GGATC 3 cut(s) 517, 924, 955
Ama87I CYCGRG 2 cut(s) 639, 694
ApeKI GCWGC 2 cut(s) 397, 704
ApoI RAATTY 3 cut(s) 97, 107, 1016
AseI ATTAAT 2 cut(s) 498, 873
Asp700I GAANNNNTTC 1 cut(s) 866
AspLEI GCGC 1 cut(s) 586
AvaI CYCGRG 2 cut(s) 639, 694
AxyI CCTNAGG 1 cut(s) 377
BanII GRGCYC 1 cut(s) 234
BarI GAAGNNNNNNTAC 2 cut(s) 947, 979
BbsI GAAGAC 1 cut(s) 691
Bbv12I GWGCWC 1 cut(s) 258
BbvI GCAGC 2 cut(s) 409, 691
BccI CCATC 2 cut(s) 69, 659
BceAI ACGGC 1 cut(s) 591
BciT130I CCWGG 1 cut(s) 810
BfaI CTAG 1 cut(s) 293
BfmI CTRYAG 1 cut(s) 764
BglII AGATCT 1 cut(s) 556
BisI GCNGC 2 cut(s) 398, 705
BlpI GCTNAGC 1 cut(s) 348
BlsI GCNGC 2 cut(s) 399, 706
Bme1390I CCNGG 1 cut(s) 810
BmeT110I CYCGRG 2 cut(s) 639, 694
BmiI GGNNCC 1 cut(s) 240
BmrFI CCNGG 1 cut(s) 810
BmrI ACTGGG 1 cut(s) 990
BmsI GCATC 1 cut(s) 759
BmuI ACTGGG 1 cut(s) 990
BpiI GAAGAC 1 cut(s) 691
Bpu1102I GCTNAGC 1 cut(s) 348
BpuEI CTTGAG 1 cut(s) 322
BsaBI GATNNNNATC 1 cut(s) 555
BsaJI CCNNGG 3 cut(s) 77, 234, 695
Bsc4I CCNNNNNNNGG 2 cut(s) 644, 944
Bse1I ACTGG 1 cut(s) 985
Bse21I CCTNAGG 1 cut(s) 377
Bse3DI GCAATG 2 cut(s) 749, 798
Bse8I GATNNNNATC 1 cut(s) 555
BseBI CCWGG 1 cut(s) 810
BseDI CCNNGG 3 cut(s) 77, 234, 695
BseGI GGATG 2 cut(s) 445, 781
BseJI GATNNNNATC 1 cut(s) 555
BseLI CCNNNNNNNGG 2 cut(s) 644, 944
BseMI GCAATG 2 cut(s) 749, 798
BseMII CTCAG 2 cut(s) 152, 339
BseNI ACTGG 1 cut(s) 985
BseXI GCAGC 2 cut(s) 409, 691
Bsh1285I CGRYCG 1 cut(s) 115
BsiEI CGRYCG 1 cut(s) 115
BsiHKAI GWGCWC 1 cut(s) 258
BsiHKCI CYCGRG 2 cut(s) 639, 694
BslI CCNNNNNNNGG 2 cut(s) 644, 944
BsmI GAATGC 2 cut(s) 193, 586
BsoBI CYCGRG 2 cut(s) 639, 694
Bsp1286I GDGCHC 2 cut(s) 234, 258
Bsp143I GATC 6 cut(s) 341, 509, 556, 826, 929, 947
Bsp1720I GCTNAGC 1 cut(s) 348
Bsp19I CCATGG 1 cut(s) 234
BspACI CCGC 5 cut(s) 89, 142, 352, 731, 905
BspCNI CTCAG 2 cut(s) 153, 340
BspLI GGNNCC 1 cut(s) 240
BspMAI CTGCAG 1 cut(s) 768
BspPI GGATC 3 cut(s) 517, 924, 955
BspQI GCTCTTC 1 cut(s) 53
BsrBI CCGCTC 1 cut(s) 352
BsrDI GCAATG 2 cut(s) 749, 798
BsrI ACTGG 1 cut(s) 985
BssECI CCNNGG 3 cut(s) 77, 234, 695
BssMI GATC 6 cut(s) 341, 509, 556, 826, 929, 947
BssT1I CCWWGG 1 cut(s) 234
Bst2UI CCWGG 1 cut(s) 810
Bst4CI ACNGT 3 cut(s) 116, 133, 537
Bst6I CTCTTC 2 cut(s) 53, 220
BstC8I GCNNGC 2 cut(s) 756, 858
BstDEI CTNAG 4 cut(s) 161, 348, 377, 451
BstDSI CCRYGG 1 cut(s) 234
BstF5I GGATG 2 cut(s) 445, 781
BstHHI GCGC 1 cut(s) 586
BstKTI GATC 6 cut(s) 344, 512, 559, 829, 932, 950
BstMBI GATC 6 cut(s) 341, 509, 556, 826, 929, 947
BstMCI CGRYCG 1 cut(s) 115
BstMWI GCNNNNNNNGC 4 cut(s) 88, 165, 713, 1028
BstNI CCWGG 1 cut(s) 810
BstNSI RCATGY 1 cut(s) 420
BstSCI CCNGG 1 cut(s) 808
BstSFI CTRYAG 1 cut(s) 764
BstV1I GCAGC 2 cut(s) 409, 691
BstV2I GAAGAC 1 cut(s) 691
BstX2I RGATCY 2 cut(s) 556, 929
BstYI RGATCY 2 cut(s) 556, 929
Bsu36I CCTNAGG 1 cut(s) 377
BtgI CCRYGG 1 cut(s) 234
BtsCI GGATG 2 cut(s) 445, 781
BtsIMutI CAGTG 1 cut(s) 533
Cac8I GCNNGC 2 cut(s) 756, 858
CfoI GCGC 1 cut(s) 586
Csp6I GTAC 1 cut(s) 411
CviAII CATG 3 cut(s) 235, 417, 835
CviQI GTAC 1 cut(s) 411
DdeI CTNAG 4 cut(s) 161, 348, 377, 451
DpnI GATC 6 cut(s) 343, 511, 558, 828, 931, 949
DpnII GATC 6 cut(s) 341, 509, 556, 826, 929, 947
DraI TTTAAA 1 cut(s) 529
Eam1104I CTCTTC 2 cut(s) 53, 220
EarI CTCTTC 2 cut(s) 53, 220
Eco130I CCWWGG 1 cut(s) 234
Eco24I GRGCYC 1 cut(s) 234
Eco57I CTGAAG 2 cut(s) 531, 915
Eco81I CCTNAGG 1 cut(s) 377
Eco88I CYCGRG 2 cut(s) 639, 694
EcoRII CCWGG 1 cut(s) 808
EcoT14I CCWWGG 1 cut(s) 234
EcoT22I ATGCAT 2 cut(s) 520, 798
EcoT38I GRGCYC 1 cut(s) 234
ErhI CCWWGG 1 cut(s) 234
FaeI CATG 3 cut(s) 238, 420, 838
FatI CATG 3 cut(s) 234, 416, 834
FauI CCCGC 3 cut(s) 96, 149, 345
Fnu4HI GCNGC 2 cut(s) 398, 705
FokI GGATG 2 cut(s) 452, 788
FriOI GRGCYC 1 cut(s) 234
Fsp4HI GCNGC 2 cut(s) 398, 705
FspBI CTAG 1 cut(s) 293
GlaI GCGC 1 cut(s) 585
GluI GCNGC 2 cut(s) 398, 705
HhaI GCGC 1 cut(s) 586
Hin1II CATG 3 cut(s) 238, 420, 838
Hin6I GCGC 1 cut(s) 584
HinP1I GCGC 1 cut(s) 584
Hpy166II GTNNAC 1 cut(s) 125
Hpy188I TCNGA 3 cut(s) 541, 550, 679
Hpy188III TCNNGA 3 cut(s) 339, 370, 1052
Hpy8I GTNNAC 1 cut(s) 125
HpyAV CCTTC 2 cut(s) 39, 425
HpyCH4III ACNGT 3 cut(s) 116, 133, 537
HpyCH4IV ACGT 1 cut(s) 324
HpyF10VI GCNNNNNNNGC 4 cut(s) 88, 165, 713, 1028
HpyF3I CTNAG 4 cut(s) 161, 348, 377, 451
HpySE526I ACGT 1 cut(s) 324
Hsp92II CATG 3 cut(s) 238, 420, 838
HspAI GCGC 1 cut(s) 584
Kzo9I GATC 6 cut(s) 341, 509, 556, 826, 929, 947
LguI GCTCTTC 1 cut(s) 53
LmnI GCTCC 2 cut(s) 394, 668
Lsp1109I GCAGC 2 cut(s) 409, 691
LweI GCATC 1 cut(s) 759
MaeI CTAG 1 cut(s) 293
MaeII ACGT 1 cut(s) 324
MaeIII GTNAC 3 cut(s) 7, 571, 817
MalI GATC 6 cut(s) 343, 511, 558, 828, 931, 949
MbiI CCGCTC 1 cut(s) 352
MboI GATC 6 cut(s) 341, 509, 556, 826, 929, 947
MboII GAAGA 8 cut(s) 15, 40, 237, 395, 566, 696, 821, 1047
MflI RGATCY 2 cut(s) 556, 929
MhlI GDGCHC 2 cut(s) 234, 258
MluCI AATT 4 cut(s) 97, 107, 330, 1016
MnlI CCTC 9 cut(s) 87, 162, 223, 252, 535, 604, 635, 648, 690
Mph1103I ATGCAT 2 cut(s) 520, 798
MroXI GAANNNNTTC 1 cut(s) 866
MseI TTAA 7 cut(s) 357, 498, 528, 629, 740, 873, 1014
MspA1I CMGCKG 1 cut(s) 347
MspR9I CCNGG 1 cut(s) 810
Mva1269I GAATGC 2 cut(s) 193, 586
MvaI CCWGG 1 cut(s) 810
MwoI GCNNNNNNNGC 4 cut(s) 88, 165, 713, 1028
NcoI CCATGG 1 cut(s) 234
NdeII GATC 6 cut(s) 341, 509, 556, 826, 929, 947
NlaIII CATG 3 cut(s) 238, 420, 838
NlaIV GGNNCC 1 cut(s) 240
NmeAIII GCCGAG 1 cut(s) 58
NmuCI GTSAC 2 cut(s) 7, 571
NsiI ATGCAT 2 cut(s) 520, 798
NspI RCATGY 1 cut(s) 420
PaeR7I CTCGAG 1 cut(s) 639
PciI ACATGT 1 cut(s) 416
PciSI GCTCTTC 1 cut(s) 53
PcsI WCGNNNNNNNCGW 1 cut(s) 857
PctI GAATGC 2 cut(s) 193, 586
PdmI GAANNNNTTC 1 cut(s) 866
PkrI GCNGC 2 cut(s) 399, 706
PscI ACATGT 1 cut(s) 416
PshBI ATTAAT 2 cut(s) 498, 873
Psp6I CCWGG 1 cut(s) 808
PspGI CCWGG 1 cut(s) 808
PspN4I GGNNCC 1 cut(s) 240
PspXI VCTCGAGB 1 cut(s) 639
PstI CTGCAG 1 cut(s) 768
PsuI RGATCY 2 cut(s) 556, 929
PvuII CAGCTG 1 cut(s) 347
RsaI GTAC 1 cut(s) 412
RsaNI GTAC 1 cut(s) 411
SapI GCTCTTC 1 cut(s) 53
SaqAI TTAA 7 cut(s) 357, 498, 528, 629, 740, 873, 1014
SatI GCNGC 2 cut(s) 398, 705
Sau3AI GATC 6 cut(s) 341, 509, 556, 826, 929, 947
ScrFI CCNGG 1 cut(s) 810
SduI GDGCHC 2 cut(s) 234, 258
SfaNI GCATC 1 cut(s) 759
SfcI CTRYAG 1 cut(s) 764
Sfr274I CTCGAG 1 cut(s) 639
SlaI CTCGAG 1 cut(s) 639
SmlI CTYRAG 2 cut(s) 337, 639
SmoI CTYRAG 2 cut(s) 337, 639
Sse9I AATT 4 cut(s) 97, 107, 330, 1016
SsiI CCGC 5 cut(s) 89, 142, 352, 731, 905
SspMI CTAG 1 cut(s) 293
StyD4I CCNGG 1 cut(s) 808
StyI CCWWGG 1 cut(s) 234
TaaI ACNGT 3 cut(s) 116, 133, 537
TaiI ACGT 1 cut(s) 327
TaqI TCGA 3 cut(s) 84, 111, 640
TasI AATT 4 cut(s) 97, 107, 330, 1016
Tru1I TTAA 7 cut(s) 357, 498, 528, 629, 740, 873, 1014
Tru9I TTAA 7 cut(s) 357, 498, 528, 629, 740, 873, 1014
TscAI CASTG 1 cut(s) 540
TseFI GTSAC 2 cut(s) 7, 571
TseI GCWGC 2 cut(s) 397, 704
Tsp45I GTSAC 2 cut(s) 7, 571
TspDTI ATGAA 4 cut(s) 183, 567, 859, 968
TspGWI ACGGA 2 cut(s) 696, 922
TspRI CASTG 1 cut(s) 540
VspI ATTAAT 2 cut(s) 498, 873
XapI RAATTY 3 cut(s) 97, 107, 1016
XceI RCATGY 1 cut(s) 420
XcmI CCANNNNNNNNNTGG 1 cut(s) 641
XhoI CTCGAG 1 cut(s) 639
XmnI GAANNNNTTC 1 cut(s) 866
XspI CTAG 1 cut(s) 293
Zsp2I ATGCAT 2 cut(s) 520, 798
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.