pycom02g22420
MYB Family

Chlorophyll(Ide) b reductase NOL

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
20528924 .. 20537418
8495 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g22420.2

Sequence Viewer

Length: 1299 bp
ATGAAAATAAATGAATATAGATCACCTTTACTAATAAAATATATTTATTTTTCATATTATTCACACAACGAAATAAAAAATAATTTAATATCGCTATTCCACAAAATTCGAACAAGCAAGCAAGGAAAGGTGTCGTACAAAGTAAGCAAGCAAAGGTGGAAGACACGATTATCCGGACCTGATCCTCTCGTTCATTCGTGTGTTAGCCTCCTGAGTTCCCCATTCCACAAATCAGAAATGGCGGTTAACAGTTGTACCTGCGCATCTATTCCACCTCTGCTCTCCTCCAAATCCCATCACTCTAACCCTCCTCGATTCCACCCGCACCCCAATTTCCCTAAATTCGACCGTTGCAGTTTTCCGACCGTTAGTTGGCGCCAAAACCTTGGCAGTCTCAGTGCCTCCGACAGTCGGATTGTAAGAGCCTCCGCCTCCGCCTCCAACTCCGCCTCCGACTCTGAGAGCAGAGAGCCCATGCTTCCTCCTTACAATGTGCTCATCACCGGCTCAACGAAAGGTATAGGATATGCTCTAGCCAAAGAGTTTCTAAAAGCAGGGGATAACGTCGTAATTTGCTCAAGATCAGCTGAACGTGTTAATGCTGCTGTTCAGAGCCTTAGGCAGGATTTCGGGGAGCAGCATGTGTGGGGTACTAACTGTGATGTTAGAGAAGGGCAGGATGTGAAAGACTTAGTTGCTTTTGCACAAAAAAACCTTAAGTACATTGATATATGGATTAATAATGCAGGATCAAATGCGTATAGCTATAAACCACTGGCAGAGGCTTCAGATGAAGACCTTATTGAAGTCGTTACTACGAATACGCTTGGTTTGATGTTATGTTGCCGTGAGGCAATAAAAATGATGTTCAACCAGCCTCGAGGTGGTCATATTTTCAACATTGATGGAGCTGGTTCCGATGGAAGACCAACCCCGAGGTTTGCAGCATACGGGGCAACAAAGCGTAGTGTGGTGCATTTAACAAAATCATTGCAGGCAGAAATGCAGATGCAGGATGTCAAAAATGTTGCAGTGCATAACCTTTCACCAGGAATGGTTACAACTGATCTTCTCATGTCTGGTGCAACTACGAAGCAGGCAAAGTTTTTCATTAATGTTTTGGCAGAACCACCTGAAGTGGTCGCTGAGTACCTGGTTCCGAATATAAGATCCGTCCCTGCCAATGGATCAATGAAGCCTACATACATTCGTTTCCTAACTGGGATAAAAGCCTACTCCCAGATATTCTCAAGATTTGCTTTTGGAGCAAGAAGAAACAGGTATGTACTTGAAGACTGA

Protein Analysis

433

Amino Acids

48.06

Weight (kDa)

9.48

Isoelectric Point (pI)

42.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 879
Acc16I TGCGCA 1 cut(s) 262
Acc36I ACCTGC 1 cut(s) 266
AccB1I GGYRCC 1 cut(s) 375
AccIII TCCGGA 1 cut(s) 173
AciI CCGC 5 cut(s) 242, 323, 429, 435, 447
AclWI GGATC 4 cut(s) 176, 757, 1164, 1195
AcsI RAATTY 2 cut(s) 105, 341
AcuI CTGAAG 2 cut(s) 771, 1155
AcyI GRCGYC 1 cut(s) 376
AfaI GTAC 6 cut(s) 137, 256, 652, 722, 1151, 1287
AfiI CCNNNNNNNGG 5 cut(s) 372, 411, 622, 884, 1184
AflII CTTAAG 1 cut(s) 716
AflIII ACRYGT 1 cut(s) 592
AgsI TTSAA 4 cut(s) 806, 871, 898, 1292
AjnI CCWGG 2 cut(s) 1048, 1152
AluBI AGCT 3 cut(s) 587, 765, 911
AluI AGCT 3 cut(s) 587, 765, 911
Alw21I GWGCWC 1 cut(s) 498
Alw26I GTCTC 1 cut(s) 398
AlwI GGATC 4 cut(s) 176, 757, 1164, 1195
Ama87I CYCGRG 2 cut(s) 879, 934
Aor13HI TCCGGA 1 cut(s) 173
ApeKI GCWGC 3 cut(s) 602, 637, 944
ApoI RAATTY 2 cut(s) 105, 341
AseI ATTAAT 2 cut(s) 738, 1113
AspLEI GCGC 2 cut(s) 263, 378
AspS9I GGNCC 1 cut(s) 176
AsuHPI GGTGA 3 cut(s) 15, 493, 1038
AsuII TTCGAA 1 cut(s) 109
AvaI CYCGRG 2 cut(s) 879, 934
AvaII GGWCC 1 cut(s) 176
AxyI CCTNAGG 1 cut(s) 617
BaeI ACNNNNGTAYC 2 cut(s) 238, 271
BanI GGYRCC 1 cut(s) 375
BanII GRGCYC 1 cut(s) 474
BarI GAAGNNNNNNTAC 2 cut(s) 1187, 1219
BbsI GAAGAC 3 cut(s) 167, 801, 931
Bbv12I GWGCWC 1 cut(s) 498
BbvI GCAGC 3 cut(s) 589, 649, 956
BccI CCATC 3 cut(s) 303, 899, 914
BceAI ACGGC 1 cut(s) 831
BciT130I CCWGG 2 cut(s) 1050, 1154
BcoDI GTCTC 1 cut(s) 398
BfaI CTAG 1 cut(s) 533
BfoI RGCGCY 1 cut(s) 379
BfrI CTTAAG 1 cut(s) 716
BfuAI ACCTGC 1 cut(s) 266
BisI GCNGC 3 cut(s) 603, 638, 945
BlsI GCNGC 3 cut(s) 604, 639, 946
Bme1390I CCNGG 2 cut(s) 1050, 1154
Bme18I GGWCC 1 cut(s) 176
BmeT110I CYCGRG 2 cut(s) 879, 934
BmgT120I GGNCC 1 cut(s) 176
BmiI GGNNCC 3 cut(s) 377, 916, 1158
BmrFI CCNGG 2 cut(s) 1050, 1154
BmrI ACTGGG 1 cut(s) 1230
BmsI GCATC 2 cut(s) 272, 999
BmuI ACTGGG 1 cut(s) 1230
BpiI GAAGAC 3 cut(s) 167, 801, 931
Bpu14I TTCGAA 1 cut(s) 109
BpuEI CTTGAG 2 cut(s) 562, 1234
BsaHI GRCGYC 1 cut(s) 376
BsaJI CCNNGG 2 cut(s) 385, 935
BsaWI WCCGGW 1 cut(s) 173
BsaXI ACNNNNNCTCC 2 cut(s) 434, 464
Bsc4I CCNNNNNNNGG 5 cut(s) 372, 411, 622, 884, 1184
Bse118I RCCGGY 1 cut(s) 503
Bse1I ACTGG 2 cut(s) 780, 1225
Bse21I CCTNAGG 1 cut(s) 617
Bse3DI GCAATG 1 cut(s) 989
BseAI TCCGGA 1 cut(s) 173
BseBI CCWGG 2 cut(s) 1050, 1154
BseDI CCNNGG 2 cut(s) 385, 935
BseGI GGATG 2 cut(s) 685, 1021
BseLI CCNNNNNNNGG 5 cut(s) 372, 411, 622, 884, 1184
BseMI GCAATG 1 cut(s) 989
BseMII CTCAG 4 cut(s) 203, 409, 450, 1137
BseNI ACTGG 2 cut(s) 780, 1225
BseRI GAGGAG 2 cut(s) 274, 300
BseXI GCAGC 3 cut(s) 589, 649, 956
Bsh1285I CGRYCG 2 cut(s) 349, 366
BshNI GGYRCC 1 cut(s) 375
BsiEI CGRYCG 2 cut(s) 349, 366
BsiHKAI GWGCWC 1 cut(s) 498
BsiHKCI CYCGRG 2 cut(s) 879, 934
BsiSI CCGG 2 cut(s) 174, 504
BslFI GGGAC 1 cut(s) 1160
BslI CCNNNNNNNGG 5 cut(s) 372, 411, 622, 884, 1184
BsmAI GTCTC 1 cut(s) 398
BsmFI GGGAC 1 cut(s) 1160
BsoBI CYCGRG 2 cut(s) 879, 934
Bsp119I TTCGAA 1 cut(s) 109
Bsp1286I GDGCHC 2 cut(s) 474, 498
Bsp13I TCCGGA 1 cut(s) 173
Bsp143I GATC 7 cut(s) 20, 181, 581, 749, 1066, 1169, 1187
BspACI CCGC 5 cut(s) 242, 323, 429, 435, 447
BspCNI CTCAG 4 cut(s) 204, 408, 451, 1138
BspEI TCCGGA 1 cut(s) 173
BspLI GGNNCC 3 cut(s) 377, 916, 1158
BspMI ACCTGC 1 cut(s) 266
BspPI GGATC 4 cut(s) 176, 757, 1164, 1195
BspT104I TTCGAA 1 cut(s) 109
BspT107I GGYRCC 1 cut(s) 375
BspTI CTTAAG 1 cut(s) 716
BsrDI GCAATG 1 cut(s) 989
BsrFI RCCGGY 1 cut(s) 503
BsrI ACTGG 2 cut(s) 780, 1225
BssAI RCCGGY 1 cut(s) 503
BssECI CCNNGG 2 cut(s) 385, 935
BssMI GATC 7 cut(s) 20, 181, 581, 749, 1066, 1169, 1187
BssNI GRCGYC 1 cut(s) 376
BssT1I CCWWGG 1 cut(s) 385
Bst2UI CCWGG 2 cut(s) 1050, 1154
Bst4CI ACNGT 5 cut(s) 251, 350, 367, 410, 659
BstACI GRCGYC 1 cut(s) 376
BstAFI CTTAAG 1 cut(s) 716
BstBI TTCGAA 1 cut(s) 109
BstC8I GCNNGC 4 cut(s) 119, 149, 996, 1098
BstDEI CTNAG 6 cut(s) 212, 395, 459, 617, 691, 1146
BstENI CCTNNNNNAGG 1 cut(s) 620
BstF5I GGATG 2 cut(s) 685, 1021
BstH2I RGCGCY 1 cut(s) 379
BstHHI GCGC 2 cut(s) 263, 378
BstKTI GATC 7 cut(s) 23, 184, 584, 752, 1069, 1172, 1190
BstMAI GTCTC 1 cut(s) 398
BstMBI GATC 7 cut(s) 20, 181, 581, 749, 1066, 1169, 1187
BstMCI CGRYCG 2 cut(s) 349, 366
BstMWI GCNNNNNNNGC 2 cut(s) 953, 1265
BstNI CCWGG 2 cut(s) 1050, 1154
BstNSI RCATGY 1 cut(s) 644
BstSCI CCNGG 2 cut(s) 1048, 1152
BstV1I GCAGC 3 cut(s) 589, 649, 956
BstV2I GAAGAC 3 cut(s) 167, 801, 931
BstX2I RGATCY 1 cut(s) 1169
BstXI CCANNNNNNTGG 1 cut(s) 386
BstYI RGATCY 1 cut(s) 1169
Bsu36I CCTNAGG 1 cut(s) 617
BtsCI GGATG 2 cut(s) 685, 1021
BtsI GCAGTG 1 cut(s) 1038
BtsIMutI CAGTG 3 cut(s) 403, 773, 1038
BveI ACCTGC 1 cut(s) 266
Cac8I GCNNGC 4 cut(s) 119, 149, 996, 1098
CfoI GCGC 2 cut(s) 263, 378
Cfr10I RCCGGY 1 cut(s) 503
Cfr13I GGNCC 1 cut(s) 176
CsiI ACCWGGT 1 cut(s) 1152
Csp6I GTAC 6 cut(s) 136, 255, 651, 721, 1150, 1286
CviAII CATG 3 cut(s) 475, 641, 1075
CviQI GTAC 6 cut(s) 136, 255, 651, 721, 1150, 1286
DdeI CTNAG 6 cut(s) 212, 395, 459, 617, 691, 1146
DinI GGCGCC 1 cut(s) 377
DpnI GATC 7 cut(s) 22, 183, 583, 751, 1068, 1171, 1189
DpnII GATC 7 cut(s) 20, 181, 581, 749, 1066, 1169, 1187
EciI GGCGGA 3 cut(s) 418, 424, 436
Eco130I CCWWGG 1 cut(s) 385
Eco24I GRGCYC 1 cut(s) 474
Eco47I GGWCC 1 cut(s) 176
Eco57I CTGAAG 2 cut(s) 771, 1155
Eco81I CCTNAGG 1 cut(s) 617
Eco88I CYCGRG 2 cut(s) 879, 934
EcoNI CCTNNNNNAGG 1 cut(s) 620
EcoRII CCWGG 2 cut(s) 1048, 1152
EcoT14I CCWWGG 1 cut(s) 385
EcoT38I GRGCYC 1 cut(s) 474
EgeI GGCGCC 1 cut(s) 377
EheI GGCGCC 1 cut(s) 377
ErhI CCWWGG 1 cut(s) 385
FaeI CATG 3 cut(s) 478, 644, 1078
FalI AAGNNNNNCTT 2 cut(s) 1243, 1275
FaqI GGGAC 1 cut(s) 1160
FatI CATG 3 cut(s) 474, 640, 1074
FauI CCCGC 1 cut(s) 330
Fnu4HI GCNGC 3 cut(s) 603, 638, 945
FokI GGATG 2 cut(s) 692, 1028
FriOI GRGCYC 1 cut(s) 474
Fsp4HI GCNGC 3 cut(s) 603, 638, 945
FspBI CTAG 1 cut(s) 533
FspI TGCGCA 1 cut(s) 262
GlaI GCGC 2 cut(s) 262, 377
GluI GCNGC 3 cut(s) 603, 638, 945
HaeII RGCGCY 1 cut(s) 379
HapII CCGG 2 cut(s) 174, 504
HhaI GCGC 2 cut(s) 263, 378
Hin1I GRCGYC 1 cut(s) 376
Hin1II CATG 3 cut(s) 478, 644, 1078
Hin6I GCGC 2 cut(s) 261, 376
HinP1I GCGC 2 cut(s) 261, 376
HincII GTYRAC 1 cut(s) 247
HindII GTYRAC 1 cut(s) 247
HinfI GANTC 2 cut(s) 315, 455
HpaI GTTAAC 1 cut(s) 247
HpaII CCGG 2 cut(s) 174, 504
HphI GGTGA 3 cut(s) 15, 493, 1038
Hpy166II GTNNAC 1 cut(s) 247
Hpy188III TCNNGA 4 cut(s) 174, 211, 579, 1251
Hpy8I GTNNAC 1 cut(s) 247
Hpy99I CGWCG 1 cut(s) 569
HpyAV CCTTC 1 cut(s) 665
HpyCH4III ACNGT 5 cut(s) 251, 350, 367, 410, 659
HpyCH4IV ACGT 2 cut(s) 564, 592
HpyF10VI GCNNNNNNNGC 2 cut(s) 953, 1265
HpyF3I CTNAG 6 cut(s) 212, 395, 459, 617, 691, 1146
HpySE526I ACGT 2 cut(s) 564, 592
Hsp92I GRCGYC 1 cut(s) 376
Hsp92II CATG 3 cut(s) 478, 644, 1078
HspAI GCGC 2 cut(s) 261, 376
KasI GGCGCC 1 cut(s) 375
Kpn2I TCCGGA 1 cut(s) 173
KspAI GTTAAC 1 cut(s) 247
Kzo9I GATC 7 cut(s) 20, 181, 581, 749, 1066, 1169, 1187
LmnI GCTCC 3 cut(s) 634, 908, 1265
Lsp1109I GCAGC 3 cut(s) 589, 649, 956
LweI GCATC 2 cut(s) 272, 999
MabI ACCWGGT 1 cut(s) 1152
MaeI CTAG 1 cut(s) 533
MaeII ACGT 2 cut(s) 564, 592
MaeIII GTNAC 2 cut(s) 811, 1057
MalI GATC 7 cut(s) 22, 183, 583, 751, 1068, 1171, 1189
MboI GATC 7 cut(s) 20, 181, 581, 749, 1066, 1169, 1187
MboII GAAGA 5 cut(s) 172, 806, 936, 1061, 1284
MflI RGATCY 1 cut(s) 1169
MhlI GDGCHC 2 cut(s) 474, 498
MluCI AATT 5 cut(s) 82, 105, 331, 341, 570
Mly113I GGCGCC 1 cut(s) 376
MlyI GAGTC 1 cut(s) 449
MmeI TCCRAC 5 cut(s) 386, 392, 429, 465, 477
MroI TCCGGA 1 cut(s) 173
MseI TTAA 7 cut(s) 86, 246, 597, 717, 738, 980, 1113
MslI CAYNNNNRTG 1 cut(s) 198
MspA1I CMGCKG 1 cut(s) 587
MspCI CTTAAG 1 cut(s) 716
MspI CCGG 2 cut(s) 174, 504
MspR9I CCNGG 2 cut(s) 1050, 1154
MvaI CCWGG 2 cut(s) 1050, 1154
MwoI GCNNNNNNNGC 2 cut(s) 953, 1265
NarI GGCGCC 1 cut(s) 376
NdeII GATC 7 cut(s) 20, 181, 581, 749, 1066, 1169, 1187
NlaIII CATG 3 cut(s) 478, 644, 1078
NlaIV GGNNCC 3 cut(s) 377, 916, 1158
NsbI TGCGCA 1 cut(s) 262
NspI RCATGY 1 cut(s) 644
NspV TTCGAA 1 cut(s) 109
PaeR7I CTCGAG 1 cut(s) 879
PfeI GAWTC 1 cut(s) 315
PkrI GCNGC 3 cut(s) 604, 639, 946
PleI GAGTC 1 cut(s) 449
PluTI GGCGCC 1 cut(s) 379
PpsI GAGTC 1 cut(s) 449
PshBI ATTAAT 2 cut(s) 738, 1113
Psp6I CCWGG 2 cut(s) 1048, 1152
PspGI CCWGG 2 cut(s) 1048, 1152
PspN4I GGNNCC 3 cut(s) 377, 916, 1158
PspPI GGNCC 1 cut(s) 176
PspXI VCTCGAGB 1 cut(s) 879
PsuI RGATCY 1 cut(s) 1169
PvuII CAGCTG 1 cut(s) 587
RsaI GTAC 6 cut(s) 137, 256, 652, 722, 1151, 1287
RsaNI GTAC 6 cut(s) 136, 255, 651, 721, 1150, 1286
RseI CAYNNNNRTG 1 cut(s) 198
SaqAI TTAA 7 cut(s) 86, 246, 597, 717, 738, 980, 1113
SatI GCNGC 3 cut(s) 603, 638, 945
Sau3AI GATC 7 cut(s) 20, 181, 581, 749, 1066, 1169, 1187
Sau96I GGNCC 1 cut(s) 176
SchI GAGTC 1 cut(s) 449
ScrFI CCNGG 2 cut(s) 1050, 1154
SduI GDGCHC 2 cut(s) 474, 498
SexAI ACCWGGT 1 cut(s) 1152
SfaNI GCATC 2 cut(s) 272, 999
SfoI GGCGCC 1 cut(s) 377
Sfr274I CTCGAG 1 cut(s) 879
SfuI TTCGAA 1 cut(s) 109
SinI GGWCC 1 cut(s) 176
SlaI CTCGAG 1 cut(s) 879
SmiMI CAYNNNNRTG 1 cut(s) 198
SmlI CTYRAG 4 cut(s) 577, 716, 879, 1249
SmoI CTYRAG 4 cut(s) 577, 716, 879, 1249
Sse9I AATT 5 cut(s) 82, 105, 331, 341, 570
SsiI CCGC 5 cut(s) 242, 323, 429, 435, 447
SspDI GGCGCC 1 cut(s) 375
SspMI CTAG 1 cut(s) 533
StyD4I CCNGG 2 cut(s) 1048, 1152
StyI CCWWGG 1 cut(s) 385
TaaI ACNGT 5 cut(s) 251, 350, 367, 410, 659
TaiI ACGT 2 cut(s) 567, 595
TaqI TCGA 4 cut(s) 109, 313, 345, 880
TasI AATT 5 cut(s) 82, 105, 331, 341, 570
TatI WGTACW 2 cut(s) 720, 1285
TfiI GAWTC 1 cut(s) 315
Tru1I TTAA 7 cut(s) 86, 246, 597, 717, 738, 980, 1113
Tru9I TTAA 7 cut(s) 86, 246, 597, 717, 738, 980, 1113
TscAI CASTG 3 cut(s) 403, 780, 1038
TseI GCWGC 3 cut(s) 602, 637, 944
TspDTI ATGAA 7 cut(s) 17, 27, 42, 182, 807, 1099, 1208
TspGWI ACGGA 1 cut(s) 1162
TspRI CASTG 3 cut(s) 403, 780, 1038
Vha464I CTTAAG 1 cut(s) 716
VpaK11BI GGWCC 1 cut(s) 176
VspI ATTAAT 2 cut(s) 738, 1113
XagI CCTNNNNNAGG 1 cut(s) 620
XapI RAATTY 2 cut(s) 105, 341
XceI RCATGY 1 cut(s) 644
XcmI CCANNNNNNNNNTGG 1 cut(s) 881
XhoI CTCGAG 1 cut(s) 879
XspI CTAG 1 cut(s) 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.