Protein SCAI
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03570 |
| fragaria_vesca | FvH4_7g07180 FvH4_7g07180 FvH4_7g07180 FvH4_7g07180 FvH4_7g07180 FvH4_7g07180 |
| malus_domestica | MD02G1239100.v1.1 |
| prunus_persica | Prupe.2G099200_v2.0.a1 Prupe.2G099200_v2.0.a1 Prupe.2G099200_v2.0.a1 Prupe.2G099200_v2.0.a1 |
| pyrus_communis | pycom02g20430 |
| rosa_chinensis | RchiOBHm_Chr1g0337201 |
| rosa_laevigata | RLG00000029300 RLG00000029489 |
| rosa_multiflora | Rmu_sc0002160.1_g000006 Rmu_sc0039784.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00314710 |
| rosa_rugosa | Rorug01G0132100.1 |
| rosa_samantha | Rh1AG152700 Rh1BG121700 Rh1CG143600 Rh1DG160000 |
| rosa_wichuraiana | Rw1G012490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1282 |
| Acc36I | ACCTGC | 1 cut(s) | 1282 |
| Acc65I | GGTACC | 1 cut(s) | 1133 |
| AccB1I | GGYRCC | 2 cut(s) | 829, 1133 |
| AccI | GTMKAC | 2 cut(s) | 1481, 1636 |
| AccII | CGCG | 3 cut(s) | 242, 247, 1080 |
| AciI | CCGC | 7 cut(s) | 280, 442, 651, 844, 1080, 1115, 1561 |
| AclWI | GGATC | 3 cut(s) | 866, 1417, 1502 |
| AcoI | YGGCCR | 2 cut(s) | 381, 945 |
| AcsI | RAATTY | 3 cut(s) | 74, 84, 1619 |
| AcuI | CTGAAG | 1 cut(s) | 743 |
| AfaI | GTAC | 7 cut(s) | 125, 158, 263, 275, 1019, 1135, 1257 |
| AfeI | AGCGCT | 1 cut(s) | 1584 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 307, 379, 974, 1079 |
| AflIII | ACRYGT | 1 cut(s) | 643 |
| AgsI | TTSAA | 6 cut(s) | 151, 436, 565, 1112, 1609, 1751 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1477 |
| AjnI | CCWGG | 3 cut(s) | 372, 507, 858 |
| Alw21I | GWGCWC | 2 cut(s) | 96, 735 |
| Alw26I | GTCTC | 2 cut(s) | 670, 675 |
| AlwI | GGATC | 3 cut(s) | 866, 1417, 1502 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 373, 460, 766, 1010, 1412, 1655 |
| Aor51HI | AGCGCT | 1 cut(s) | 1584 |
| AoxI | GGCC | 8 cut(s) | 207, 268, 291, 381, 593, 945, 1242, 1440 |
| ApeKI | GCWGC | 8 cut(s) | 163, 391, 454, 457, 460, 699, 1580, 1673 |
| ApoI | RAATTY | 3 cut(s) | 74, 84, 1619 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1623 |
| Asp718I | GGTACC | 1 cut(s) | 1133 |
| AspLEI | GCGC | 1 cut(s) | 1585 |
| AspS9I | GGNCC | 4 cut(s) | 268, 282, 370, 501 |
| AsuHPI | GGTGA | 4 cut(s) | 550, 1277, 1501, 1784 |
| AvaII | GGWCC | 3 cut(s) | 282, 370, 501 |
| AxyI | CCTNAGG | 1 cut(s) | 1544 |
| BaeGI | GKGCMC | 2 cut(s) | 832, 1522 |
| BalI | TGGCCA | 2 cut(s) | 383, 947 |
| BanI | GGYRCC | 2 cut(s) | 829, 1133 |
| BanII | GRGCYC | 2 cut(s) | 96, 735 |
| BauI | CACGAG | 2 cut(s) | 119, 200 |
| BbsI | GAAGAC | 4 cut(s) | 139, 206, 1201, 1637 |
| Bbv12I | GWGCWC | 2 cut(s) | 96, 735 |
| BbvI | GCAGC | 8 cut(s) | 175, 403, 447, 466, 469, 711, 1592, 1685 |
| BccI | CCATC | 6 cut(s) | 114, 442, 714, 968, 1063, 1091 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 110, 144, 170, 204 |
| BciT130I | CCWGG | 3 cut(s) | 374, 509, 860 |
| BciVI | GTATCC | 1 cut(s) | 1420 |
| BcoDI | GTCTC | 2 cut(s) | 670, 675 |
| BfaI | CTAG | 7 cut(s) | 408, 617, 780, 935, 1170, 1208, 1293 |
| BfoI | RGCGCY | 1 cut(s) | 1586 |
| BfuAI | ACCTGC | 1 cut(s) | 1282 |
| BfuI | GTATCC | 1 cut(s) | 1420 |
| BisI | GCNGC | 9 cut(s) | 164, 392, 455, 458, 461, 700, 844, 1581, 1674 |
| BlpI | GCTNAGC | 1 cut(s) | 255 |
| BlsI | GCNGC | 9 cut(s) | 165, 393, 456, 459, 462, 701, 845, 1582, 1675 |
| Bme1390I | CCNGG | 3 cut(s) | 374, 509, 860 |
| Bme18I | GGWCC | 3 cut(s) | 282, 370, 501 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1477 |
| BmgT120I | GGNCC | 4 cut(s) | 268, 282, 370, 501 |
| BmiI | GGNNCC | 7 cut(s) | 777, 831, 1135, 1182, 1324, 1565, 1717 |
| BmrFI | CCNGG | 3 cut(s) | 374, 509, 860 |
| BmrI | ACTGGG | 2 cut(s) | 23, 1483 |
| BmsI | GCATC | 6 cut(s) | 118, 662, 676, 744, 1010, 1015 |
| BmuI | ACTGGG | 2 cut(s) | 23, 1483 |
| BpiI | GAAGAC | 4 cut(s) | 139, 206, 1201, 1637 |
| BpmI | CTGGAG | 1 cut(s) | 788 |
| Bpu10I | CCTNAGC | 1 cut(s) | 395 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 255 |
| BpuEI | CTTGAG | 1 cut(s) | 1087 |
| BsaAI | YACGTR | 1 cut(s) | 683 |
| BsaI | GGTCTC | 1 cut(s) | 675 |
| BsaJI | CCNNGG | 4 cut(s) | 306, 373, 858, 1138 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 347, 377, 1737, 1767 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 307, 379, 974, 1079 |
| Bse118I | RCCGGY | 1 cut(s) | 209 |
| Bse1I | ACTGG | 6 cut(s) | 29, 50, 271, 796, 1458, 1478 |
| Bse21I | CCTNAGG | 1 cut(s) | 1544 |
| Bse3DI | GCAATG | 1 cut(s) | 1284 |
| BseBI | CCWGG | 3 cut(s) | 374, 509, 860 |
| BseDI | CCNNGG | 4 cut(s) | 306, 373, 858, 1138 |
| BseGI | GGATG | 3 cut(s) | 24, 625, 759 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 307, 379, 974, 1079 |
| BseMI | GCAATG | 1 cut(s) | 1284 |
| BseMII | CTCAG | 6 cut(s) | 269, 409, 487, 665, 686, 1035 |
| BseNI | ACTGG | 6 cut(s) | 29, 50, 271, 796, 1458, 1478 |
| BseRI | GAGGAG | 2 cut(s) | 44, 974 |
| BseSI | GKGCMC | 2 cut(s) | 832, 1522 |
| BseXI | GCAGC | 8 cut(s) | 175, 403, 447, 466, 469, 711, 1592, 1685 |
| BsgI | GTGCAG | 1 cut(s) | 473 |
| Bsh1236I | CGCG | 3 cut(s) | 242, 247, 1080 |
| Bsh1285I | CGRYCG | 1 cut(s) | 224 |
| BshFI | GGCC | 8 cut(s) | 209, 270, 293, 383, 595, 947, 1244, 1442 |
| BshNI | GGYRCC | 2 cut(s) | 829, 1133 |
| BsiEI | CGRYCG | 1 cut(s) | 224 |
| BsiHKAI | GWGCWC | 2 cut(s) | 96, 735 |
| BsiSI | CCGG | 1 cut(s) | 210 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 307, 379, 974, 1079 |
| BsmAI | GTCTC | 2 cut(s) | 670, 675 |
| BsnI | GGCC | 8 cut(s) | 209, 270, 293, 383, 595, 947, 1244, 1442 |
| Bso31I | GGTCTC | 1 cut(s) | 675 |
| Bsp1286I | GDGCHC | 4 cut(s) | 96, 735, 832, 1522 |
| Bsp1407I | TGTACA | 1 cut(s) | 156 |
| Bsp143I | GATC | 8 cut(s) | 221, 228, 237, 871, 987, 1395, 1409, 1507 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 255 |
| Bsp19I | CCATGG | 1 cut(s) | 1138 |
| Bsp68I | TCGCGA | 1 cut(s) | 247 |
| BspACI | CCGC | 7 cut(s) | 280, 442, 651, 844, 1080, 1115, 1561 |
| BspANI | GGCC | 8 cut(s) | 209, 270, 293, 383, 595, 947, 1244, 1442 |
| BspCNI | CTCAG | 6 cut(s) | 268, 408, 486, 666, 687, 1034 |
| BspFNI | CGCG | 3 cut(s) | 242, 247, 1080 |
| BspLI | GGNNCC | 7 cut(s) | 777, 831, 1135, 1182, 1324, 1565, 1717 |
| BspMI | ACCTGC | 1 cut(s) | 1282 |
| BspPI | GGATC | 3 cut(s) | 866, 1417, 1502 |
| BspT107I | GGYRCC | 2 cut(s) | 829, 1133 |
| BspTNI | GGTCTC | 1 cut(s) | 675 |
| BsrDI | GCAATG | 1 cut(s) | 1284 |
| BsrFI | RCCGGY | 1 cut(s) | 209 |
| BsrGI | TGTACA | 1 cut(s) | 156 |
| BsrI | ACTGG | 6 cut(s) | 29, 50, 271, 796, 1458, 1478 |
| BssAI | RCCGGY | 1 cut(s) | 209 |
| BssECI | CCNNGG | 4 cut(s) | 306, 373, 858, 1138 |
| BssMI | GATC | 8 cut(s) | 221, 228, 237, 871, 987, 1395, 1409, 1507 |
| BssNAI | GTATAC | 1 cut(s) | 1637 |
| BssSI | CACGAG | 2 cut(s) | 119, 200 |
| BssT1I | CCWWGG | 1 cut(s) | 1138 |
| Bst1107I | GTATAC | 1 cut(s) | 1637 |
| Bst2BI | CACGAG | 2 cut(s) | 119, 200 |
| Bst2UI | CCWGG | 3 cut(s) | 374, 509, 860 |
| Bst4CI | ACNGT | 6 cut(s) | 623, 952, 1128, 1229, 1641, 1687 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 460, 659, 1007 |
| BstAUI | TGTACA | 1 cut(s) | 156 |
| BstBAI | YACGTR | 1 cut(s) | 683 |
| BstC8I | GCNNGC | 6 cut(s) | 6, 295, 385, 389, 428, 1380 |
| BstDEI | CTNAG | 7 cut(s) | 255, 395, 473, 674, 695, 1021, 1544 |
| BstDSI | CCRYGG | 1 cut(s) | 1138 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 305 |
| BstF5I | GGATG | 3 cut(s) | 24, 625, 759 |
| BstFNI | CGCG | 3 cut(s) | 242, 247, 1080 |
| BstH2I | RGCGCY | 1 cut(s) | 1586 |
| BstHHI | GCGC | 1 cut(s) | 1585 |
| BstKTI | GATC | 8 cut(s) | 224, 231, 240, 874, 990, 1398, 1412, 1510 |
| BstMAI | GTCTC | 2 cut(s) | 670, 675 |
| BstMBI | GATC | 8 cut(s) | 221, 228, 237, 871, 987, 1395, 1409, 1507 |
| BstMCI | CGRYCG | 1 cut(s) | 224 |
| BstNI | CCWGG | 3 cut(s) | 374, 509, 860 |
| BstNSI | RCATGY | 4 cut(s) | 280, 364, 647, 1680 |
| BstSCI | CCNGG | 3 cut(s) | 372, 507, 858 |
| BstSLI | GKGCMC | 2 cut(s) | 832, 1522 |
| BstUI | CGCG | 3 cut(s) | 242, 247, 1080 |
| BstV1I | GCAGC | 8 cut(s) | 175, 403, 447, 466, 469, 711, 1592, 1685 |
| BstV2I | GAAGAC | 4 cut(s) | 139, 206, 1201, 1637 |
| BstX2I | RGATCY | 1 cut(s) | 1409 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 803, 1145 |
| BstYI | RGATCY | 1 cut(s) | 1409 |
| BstZ17I | GTATAC | 1 cut(s) | 1637 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1544 |
| BsuI | GTATCC | 1 cut(s) | 1420 |
| BsuRI | GGCC | 8 cut(s) | 209, 270, 293, 383, 595, 947, 1244, 1442 |
| BtgI | CCRYGG | 1 cut(s) | 1138 |
| BtgZI | GCGATG | 1 cut(s) | 92 |
| BtsCI | GGATG | 3 cut(s) | 24, 625, 759 |
| BtsIMutI | CAGTG | 2 cut(s) | 767, 1234 |
| BtuMI | TCGCGA | 1 cut(s) | 247 |
| BveI | ACCTGC | 1 cut(s) | 1282 |
| Cac8I | GCNNGC | 6 cut(s) | 6, 295, 385, 389, 428, 1380 |
| CaiI | CAGNNNCTG | 6 cut(s) | 373, 460, 766, 1010, 1412, 1655 |
| CfoI | GCGC | 1 cut(s) | 1585 |
| Cfr10I | RCCGGY | 1 cut(s) | 209 |
| Cfr13I | GGNCC | 4 cut(s) | 268, 282, 370, 501 |
| CseI | GACGC | 2 cut(s) | 231, 1641 |
| Csp6I | GTAC | 7 cut(s) | 124, 157, 262, 274, 1018, 1134, 1256 |
| CviAII | CATG | 7 cut(s) | 277, 361, 418, 644, 1139, 1423, 1677 |
| CviQI | GTAC | 7 cut(s) | 124, 157, 262, 274, 1018, 1134, 1256 |
| DdeI | CTNAG | 7 cut(s) | 255, 395, 473, 674, 695, 1021, 1544 |
| DpnI | GATC | 8 cut(s) | 223, 230, 239, 873, 989, 1397, 1411, 1509 |
| DpnII | GATC | 8 cut(s) | 221, 228, 237, 871, 987, 1395, 1409, 1507 |
| DraI | TTTAAA | 1 cut(s) | 523 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1477 |
| EaeI | YGGCCR | 2 cut(s) | 381, 945 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1477 |
| Ecl136II | GAGCTC | 2 cut(s) | 94, 733 |
| Eco130I | CCWWGG | 1 cut(s) | 1138 |
| Eco147I | AGGCCT | 1 cut(s) | 595 |
| Eco24I | GRGCYC | 2 cut(s) | 96, 735 |
| Eco31I | GGTCTC | 1 cut(s) | 675 |
| Eco47I | GGWCC | 3 cut(s) | 282, 370, 501 |
| Eco47III | AGCGCT | 1 cut(s) | 1584 |
| Eco53kI | GAGCTC | 2 cut(s) | 94, 733 |
| Eco57I | CTGAAG | 1 cut(s) | 743 |
| Eco81I | CCTNAGG | 1 cut(s) | 1544 |
| EcoICRI | GAGCTC | 2 cut(s) | 94, 733 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 305 |
| EcoO109I | RGGNCCY | 2 cut(s) | 370, 501 |
| EcoRII | CCWGG | 3 cut(s) | 372, 507, 858 |
| EcoT14I | CCWWGG | 1 cut(s) | 1138 |
| EcoT38I | GRGCYC | 2 cut(s) | 96, 735 |
| ErhI | CCWWGG | 1 cut(s) | 1138 |
| FaeI | CATG | 7 cut(s) | 280, 364, 421, 647, 1142, 1426, 1680 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 488, 520, 1718, 1750 |
| FatI | CATG | 7 cut(s) | 276, 360, 417, 643, 1138, 1422, 1676 |
| FauI | CCCGC | 2 cut(s) | 435, 1108 |
| FblI | GTMKAC | 2 cut(s) | 1481, 1636 |
| Fnu4HI | GCNGC | 9 cut(s) | 164, 392, 455, 458, 461, 700, 844, 1581, 1674 |
| FokI | GGATG | 3 cut(s) | 11, 612, 766 |
| FriOI | GRGCYC | 2 cut(s) | 96, 735 |
| Fsp4HI | GCNGC | 9 cut(s) | 164, 392, 455, 458, 461, 700, 844, 1581, 1674 |
| FspBI | CTAG | 7 cut(s) | 408, 617, 780, 935, 1170, 1208, 1293 |
| GlaI | GCGC | 1 cut(s) | 1584 |
| GluI | GCNGC | 9 cut(s) | 164, 392, 455, 458, 461, 700, 844, 1581, 1674 |
| GsuI | CTGGAG | 1 cut(s) | 788 |
| HaeII | RGCGCY | 1 cut(s) | 1586 |
| HaeIII | GGCC | 8 cut(s) | 209, 270, 293, 383, 595, 947, 1244, 1442 |
| HapII | CCGG | 1 cut(s) | 210 |
| HgaI | GACGC | 2 cut(s) | 231, 1641 |
| HhaI | GCGC | 1 cut(s) | 1585 |
| Hin1II | CATG | 7 cut(s) | 280, 364, 421, 647, 1142, 1426, 1680 |
| Hin6I | GCGC | 1 cut(s) | 1583 |
| HinP1I | GCGC | 1 cut(s) | 1583 |
| HindIII | AAGCTT | 3 cut(s) | 1105, 1233, 1448 |
| HpaII | CCGG | 1 cut(s) | 210 |
| HphI | GGTGA | 4 cut(s) | 550, 1277, 1501, 1784 |
| Hpy166II | GTNNAC | 7 cut(s) | 157, 159, 1124, 1353, 1482, 1637, 1705 |
| Hpy8I | GTNNAC | 7 cut(s) | 157, 159, 1124, 1353, 1482, 1637, 1705 |
| Hpy99I | CGWCG | 2 cut(s) | 222, 247 |
| HpyAV | CCTTC | 6 cut(s) | 514, 927, 1047, 1083, 1609, 1736 |
| HpyCH4III | ACNGT | 6 cut(s) | 623, 952, 1128, 1229, 1641, 1687 |
| HpyCH4IV | ACGT | 3 cut(s) | 682, 1043, 1707 |
| HpyCH4V | TGCA | 7 cut(s) | 4, 454, 495, 662, 1277, 1378, 1696 |
| HpyF3I | CTNAG | 7 cut(s) | 255, 395, 473, 674, 695, 1021, 1544 |
| HpySE526I | ACGT | 3 cut(s) | 682, 1043, 1707 |
| Hsp92II | CATG | 7 cut(s) | 280, 364, 421, 647, 1142, 1426, 1680 |
| HspAI | GCGC | 1 cut(s) | 1583 |
| KpnI | GGTACC | 1 cut(s) | 1137 |
| Kzo9I | GATC | 8 cut(s) | 221, 228, 237, 871, 987, 1395, 1409, 1507 |
| LmnI | GCTCC | 6 cut(s) | 99, 961, 1287, 1375, 1603, 1715 |
| Lsp1109I | GCAGC | 8 cut(s) | 175, 403, 447, 466, 469, 711, 1592, 1685 |
| LweI | GCATC | 6 cut(s) | 118, 662, 676, 744, 1010, 1015 |
| MaeI | CTAG | 7 cut(s) | 408, 617, 780, 935, 1170, 1208, 1293 |
| MaeII | ACGT | 3 cut(s) | 682, 1043, 1707 |
| MaeIII | GTNAC | 6 cut(s) | 922, 1172, 1469, 1489, 1532, 1772 |
| MalI | GATC | 8 cut(s) | 223, 230, 239, 873, 989, 1397, 1411, 1509 |
| MboI | GATC | 8 cut(s) | 221, 228, 237, 871, 987, 1395, 1409, 1507 |
| MboII | GAAGA | 6 cut(s) | 139, 206, 1206, 1281, 1290, 1637 |
| MflI | RGATCY | 1 cut(s) | 1409 |
| MhlI | GDGCHC | 4 cut(s) | 96, 735, 832, 1522 |
| MlsI | TGGCCA | 2 cut(s) | 383, 947 |
| MluCI | AATT | 4 cut(s) | 74, 84, 1619, 1689 |
| MluNI | TGGCCA | 2 cut(s) | 383, 947 |
| MlyI | GAGTC | 5 cut(s) | 43, 486, 1211, 1545, 1769 |
| MmeI | TCCRAC | 1 cut(s) | 1625 |
| Mox20I | TGGCCA | 2 cut(s) | 383, 947 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1623 |
| MscI | TGGCCA | 2 cut(s) | 383, 947 |
| MseI | TTAA | 4 cut(s) | 351, 465, 522, 849 |
| MslI | CAYNNNNRTG | 3 cut(s) | 711, 1143, 1421 |
| Msp20I | TGGCCA | 2 cut(s) | 383, 947 |
| MspA1I | CMGCKG | 2 cut(s) | 259, 460 |
| MspI | CCGG | 1 cut(s) | 210 |
| MspR9I | CCNGG | 3 cut(s) | 374, 509, 860 |
| MvaI | CCWGG | 3 cut(s) | 374, 509, 860 |
| MvnI | CGCG | 3 cut(s) | 242, 247, 1080 |
| NcoI | CCATGG | 1 cut(s) | 1138 |
| NdeII | GATC | 8 cut(s) | 221, 228, 237, 871, 987, 1395, 1409, 1507 |
| NlaIII | CATG | 7 cut(s) | 280, 364, 421, 647, 1142, 1426, 1680 |
| NlaIV | GGNNCC | 7 cut(s) | 777, 831, 1135, 1182, 1324, 1565, 1717 |
| NmeAIII | GCCGAG | 1 cut(s) | 1468 |
| NmuCI | GTSAC | 5 cut(s) | 1172, 1469, 1489, 1532, 1772 |
| NruI | TCGCGA | 1 cut(s) | 247 |
| NspI | RCATGY | 4 cut(s) | 280, 364, 647, 1680 |
| PaqCI | CACCTGC | 1 cut(s) | 1282 |
| PceI | AGGCCT | 1 cut(s) | 595 |
| PciI | ACATGT | 1 cut(s) | 643 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1623 |
| PfeI | GAWTC | 5 cut(s) | 249, 436, 541, 632, 1781 |
| PfoI | TCCNGGA | 1 cut(s) | 507 |
| PkrI | GCNGC | 9 cut(s) | 165, 393, 456, 459, 462, 701, 845, 1582, 1675 |
| Ple19I | CGATCG | 1 cut(s) | 224 |
| PleI | GAGTC | 5 cut(s) | 43, 485, 1211, 1545, 1769 |
| PpsI | GAGTC | 5 cut(s) | 43, 485, 1211, 1545, 1769 |
| Ppu21I | YACGTR | 1 cut(s) | 683 |
| PpuMI | RGGWCCY | 2 cut(s) | 370, 501 |
| PscI | ACATGT | 1 cut(s) | 643 |
| Psp124BI | GAGCTC | 2 cut(s) | 96, 735 |
| Psp5II | RGGWCCY | 2 cut(s) | 370, 501 |
| Psp6I | CCWGG | 3 cut(s) | 372, 507, 858 |
| PspGI | CCWGG | 3 cut(s) | 372, 507, 858 |
| PspN4I | GGNNCC | 7 cut(s) | 777, 831, 1135, 1182, 1324, 1565, 1717 |
| PspPI | GGNCC | 4 cut(s) | 268, 282, 370, 501 |
| PspPPI | RGGWCCY | 2 cut(s) | 370, 501 |
| PstNI | CAGNNNCTG | 6 cut(s) | 373, 460, 766, 1010, 1412, 1655 |
| PsuI | RGATCY | 1 cut(s) | 1409 |
| PvuI | CGATCG | 1 cut(s) | 224 |
| PvuII | CAGCTG | 2 cut(s) | 259, 460 |
| RruI | TCGCGA | 1 cut(s) | 247 |
| RsaI | GTAC | 7 cut(s) | 125, 158, 263, 275, 1019, 1135, 1257 |
| RsaNI | GTAC | 7 cut(s) | 124, 157, 262, 274, 1018, 1134, 1256 |
| RseI | CAYNNNNRTG | 3 cut(s) | 711, 1143, 1421 |
| SacI | GAGCTC | 2 cut(s) | 96, 735 |
| SaqAI | TTAA | 4 cut(s) | 351, 465, 522, 849 |
| SatI | GCNGC | 9 cut(s) | 164, 392, 455, 458, 461, 700, 844, 1581, 1674 |
| Sau3AI | GATC | 8 cut(s) | 221, 228, 237, 871, 987, 1395, 1409, 1507 |
| Sau96I | GGNCC | 4 cut(s) | 268, 282, 370, 501 |
| SchI | GAGTC | 5 cut(s) | 43, 486, 1211, 1545, 1769 |
| ScrFI | CCNGG | 3 cut(s) | 374, 509, 860 |
| SduI | GDGCHC | 4 cut(s) | 96, 735, 832, 1522 |
| SfaNI | GCATC | 6 cut(s) | 118, 662, 676, 744, 1010, 1015 |
| SinI | GGWCC | 3 cut(s) | 282, 370, 501 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 711, 1143, 1421 |
| SmlI | CTYRAG | 1 cut(s) | 1102 |
| SmoI | CTYRAG | 1 cut(s) | 1102 |
| Sse9I | AATT | 4 cut(s) | 74, 84, 1619, 1689 |
| SseBI | AGGCCT | 1 cut(s) | 595 |
| SsiI | CCGC | 7 cut(s) | 280, 442, 651, 844, 1080, 1115, 1561 |
| SspMI | CTAG | 7 cut(s) | 408, 617, 780, 935, 1170, 1208, 1293 |
| SstI | GAGCTC | 2 cut(s) | 96, 735 |
| StuI | AGGCCT | 1 cut(s) | 595 |
| StyD4I | CCNGG | 3 cut(s) | 372, 507, 858 |
| StyI | CCWWGG | 1 cut(s) | 1138 |
| TaaI | ACNGT | 6 cut(s) | 623, 952, 1128, 1229, 1641, 1687 |
| TaiI | ACGT | 3 cut(s) | 685, 1046, 1710 |
| TaqI | TCGA | 2 cut(s) | 88, 220 |
| TasI | AATT | 4 cut(s) | 74, 84, 1619, 1689 |
| TatI | WGTACW | 5 cut(s) | 156, 261, 273, 1017, 1255 |
| TauI | GCSGC | 1 cut(s) | 846 |
| TfiI | GAWTC | 5 cut(s) | 249, 436, 541, 632, 1781 |
| Tru1I | TTAA | 4 cut(s) | 351, 465, 522, 849 |
| Tru9I | TTAA | 4 cut(s) | 351, 465, 522, 849 |
| TscAI | CASTG | 2 cut(s) | 767, 1234 |
| TseFI | GTSAC | 5 cut(s) | 1172, 1469, 1489, 1532, 1772 |
| TseI | GCWGC | 8 cut(s) | 163, 391, 454, 457, 460, 699, 1580, 1673 |
| Tsp45I | GTSAC | 5 cut(s) | 1172, 1469, 1489, 1532, 1772 |
| TspDTI | ATGAA | 6 cut(s) | 391, 599, 777, 1169, 1290, 1452 |
| TspRI | CASTG | 2 cut(s) | 767, 1234 |
| VpaK11BI | GGWCC | 3 cut(s) | 282, 370, 501 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 305 |
| XapI | RAATTY | 3 cut(s) | 74, 84, 1619 |
| XceI | RCATGY | 4 cut(s) | 280, 364, 647, 1680 |
| XmiI | GTMKAC | 2 cut(s) | 1481, 1636 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1623 |
| XspI | CTAG | 7 cut(s) | 408, 617, 780, 935, 1170, 1208, 1293 |