Protein SCAI
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03570 |
| fragaria_vesca | FvH4_7g07180 FvH4_7g07180 FvH4_7g07180 FvH4_7g07180 FvH4_7g07180 FvH4_7g07180 |
| malus_domestica | MD02G1239100.v1.1 |
| prunus_persica | Prupe.2G099200_v2.0.a1 Prupe.2G099200_v2.0.a1 Prupe.2G099200_v2.0.a1 Prupe.2G099200_v2.0.a1 |
| pyrus_communis | pycom02g20430 |
| rosa_chinensis | RchiOBHm_Chr1g0337201 |
| rosa_laevigata | RLG00000029300 RLG00000029489 |
| rosa_multiflora | Rmu_sc0002160.1_g000006 Rmu_sc0039784.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00314710 |
| rosa_rugosa | Rorug01G0132100.1 |
| rosa_samantha | Rh1AG152700 Rh1BG121700 Rh1CG143600 Rh1DG160000 |
| rosa_wichuraiana | Rw1G012490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 829 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 974 |
| AccI | GTMKAC | 2 cut(s) | 42, 156 |
| AccII | CGCG | 3 cut(s) | 242, 247, 254 |
| AciI | CCGC | 5 cut(s) | 109, 190, 844, 999, 1556 |
| AclWI | GGATC | 3 cut(s) | 866, 1462, 1505 |
| AcoI | YGGCCR | 2 cut(s) | 381, 841 |
| AcsI | RAATTY | 4 cut(s) | 74, 173, 1595, 1703 |
| AcuI | CTGAAG | 1 cut(s) | 987 |
| AcyI | GRCGYC | 2 cut(s) | 129, 830 |
| AdeI | CACNNNGTG | 1 cut(s) | 1627 |
| AfaI | GTAC | 7 cut(s) | 125, 275, 314, 347, 1233, 1614, 1728 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 216, 223, 379, 448, 839, 974, 1055, 1492 |
| AgsI | TTSAA | 7 cut(s) | 151, 352, 436, 565, 761, 1269, 1585 |
| AjnI | CCWGG | 3 cut(s) | 507, 615, 832 |
| Alw21I | GWGCWC | 3 cut(s) | 96, 735, 1700 |
| Alw26I | GTCTC | 4 cut(s) | 54, 218, 670, 1635 |
| AlwI | GGATC | 3 cut(s) | 866, 1462, 1505 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 460, 1010, 1388 |
| AoxI | GGCC | 6 cut(s) | 207, 381, 477, 593, 841, 1172 |
| ApoI | RAATTY | 4 cut(s) | 74, 173, 1595, 1703 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1651, 1683 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1599 |
| AspLEI | GCGC | 2 cut(s) | 256, 832 |
| AspS9I | GGNCC | 4 cut(s) | 282, 370, 501, 837 |
| AsuC2I | CCSGG | 1 cut(s) | 29 |
| AsuHPI | GGTGA | 2 cut(s) | 550, 1760 |
| AsuNHI | GCTAGC | 1 cut(s) | 293 |
| AvaII | GGWCC | 4 cut(s) | 282, 370, 501, 837 |
| AxyI | CCTNAGG | 1 cut(s) | 1520 |
| BaeGI | GKGCMC | 1 cut(s) | 1498 |
| BalI | TGGCCA | 1 cut(s) | 383 |
| BanI | GGYRCC | 1 cut(s) | 829 |
| BanII | GRGCYC | 3 cut(s) | 96, 735, 1700 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1710, 1742 |
| BauI | CACGAG | 1 cut(s) | 1053 |
| BbsI | GAAGAC | 1 cut(s) | 139 |
| Bbv12I | GWGCWC | 3 cut(s) | 96, 735, 1700 |
| BccI | CCATC | 4 cut(s) | 442, 714, 968, 976 |
| BciT130I | CCWGG | 3 cut(s) | 509, 617, 834 |
| BcnI | CCSGG | 1 cut(s) | 29 |
| BcoDI | GTCTC | 4 cut(s) | 54, 218, 670, 1635 |
| BfaI | CTAG | 9 cut(s) | 21, 294, 408, 740, 780, 810, 1092, 1184, 1434 |
| BfoI | RGCGCY | 1 cut(s) | 833 |
| BmcAI | AGTACT | 1 cut(s) | 347 |
| Bme1390I | CCNGG | 4 cut(s) | 29, 509, 617, 834 |
| Bme18I | GGWCC | 4 cut(s) | 282, 370, 501, 837 |
| BmgT120I | GGNCC | 4 cut(s) | 282, 370, 501, 837 |
| BmiI | GGNNCC | 5 cut(s) | 777, 831, 838, 1158, 1300 |
| BmrFI | CCNGG | 4 cut(s) | 29, 509, 617, 834 |
| BmrI | ACTGGG | 3 cut(s) | 1140, 1459, 1619 |
| BmsI | GCATC | 4 cut(s) | 33, 676, 744, 1015 |
| BmtI | GCTAGC | 1 cut(s) | 297 |
| BmuI | ACTGGG | 3 cut(s) | 1140, 1459, 1619 |
| BpiI | GAAGAC | 1 cut(s) | 139 |
| BpmI | CTGGAG | 1 cut(s) | 788 |
| Bpu10I | CCTNAGC | 1 cut(s) | 395 |
| BpuEI | CTTGAG | 2 cut(s) | 458, 1063 |
| BpuMI | CCSGG | 1 cut(s) | 29 |
| BsaHI | GRCGYC | 2 cut(s) | 129, 830 |
| BsaI | GGTCTC | 2 cut(s) | 54, 218 |
| BsaJI | CCNNGG | 5 cut(s) | 306, 480, 833, 893, 1114 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 78, 108, 347, 377, 1713, 1743 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 216, 223, 379, 448, 839, 974, 1055, 1492 |
| Bse118I | RCCGGY | 1 cut(s) | 209 |
| Bse1I | ACTGG | 5 cut(s) | 50, 796, 1146, 1454, 1625 |
| Bse21I | CCTNAGG | 1 cut(s) | 1520 |
| Bse3DI | GCAATG | 1 cut(s) | 1260 |
| BseBI | CCWGG | 3 cut(s) | 509, 617, 834 |
| BseDI | CCNNGG | 5 cut(s) | 306, 480, 833, 893, 1114 |
| BseGI | GGATG | 3 cut(s) | 24, 625, 759 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 216, 223, 379, 448, 839, 974, 1055, 1492 |
| BseMI | GCAATG | 1 cut(s) | 1260 |
| BseMII | CTCAG | 5 cut(s) | 326, 409, 1410, 1511, 1728 |
| BseNI | ACTGG | 5 cut(s) | 50, 796, 1146, 1454, 1625 |
| BseRI | GAGGAG | 1 cut(s) | 974 |
| BseSI | GKGCMC | 1 cut(s) | 1498 |
| BseX3I | CGGCCG | 1 cut(s) | 841 |
| BsgI | GTGCAG | 2 cut(s) | 29, 473 |
| Bsh1236I | CGCG | 3 cut(s) | 242, 247, 254 |
| Bsh1285I | CGRYCG | 2 cut(s) | 224, 844 |
| BshFI | GGCC | 6 cut(s) | 209, 383, 479, 595, 843, 1174 |
| BshNI | GGYRCC | 1 cut(s) | 829 |
| BsiEI | CGRYCG | 2 cut(s) | 224, 844 |
| BsiHKAI | GWGCWC | 3 cut(s) | 96, 735, 1700 |
| BsiSI | CCGG | 4 cut(s) | 29, 210, 217, 840 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 216, 223, 379, 448, 839, 974, 1055, 1492 |
| BsmAI | GTCTC | 4 cut(s) | 54, 218, 670, 1635 |
| BsnI | GGCC | 6 cut(s) | 209, 383, 479, 595, 843, 1174 |
| Bso31I | GGTCTC | 2 cut(s) | 54, 218 |
| Bsp1286I | GDGCHC | 4 cut(s) | 96, 735, 1498, 1700 |
| Bsp143I | GATC | 6 cut(s) | 221, 228, 237, 871, 1454, 1510 |
| Bsp19I | CCATGG | 1 cut(s) | 1114 |
| Bsp68I | TCGCGA | 1 cut(s) | 247 |
| BspACI | CCGC | 5 cut(s) | 109, 190, 844, 999, 1556 |
| BspANI | GGCC | 6 cut(s) | 209, 383, 479, 595, 843, 1174 |
| BspCNI | CTCAG | 5 cut(s) | 327, 408, 1411, 1512, 1727 |
| BspFNI | CGCG | 3 cut(s) | 242, 247, 254 |
| BspHI | TCATGA | 1 cut(s) | 1772 |
| BspLI | GGNNCC | 5 cut(s) | 777, 831, 838, 1158, 1300 |
| BspOI | GCTAGC | 1 cut(s) | 297 |
| BspPI | GGATC | 3 cut(s) | 866, 1462, 1505 |
| BspQI | GCTCTTC | 1 cut(s) | 1279 |
| BspT107I | GGYRCC | 1 cut(s) | 829 |
| BspTNI | GGTCTC | 2 cut(s) | 54, 218 |
| BsrDI | GCAATG | 1 cut(s) | 1260 |
| BsrFI | RCCGGY | 1 cut(s) | 209 |
| BsrI | ACTGG | 5 cut(s) | 50, 796, 1146, 1454, 1625 |
| BssAI | RCCGGY | 1 cut(s) | 209 |
| BssECI | CCNNGG | 5 cut(s) | 306, 480, 833, 893, 1114 |
| BssMI | GATC | 6 cut(s) | 221, 228, 237, 871, 1454, 1510 |
| BssNI | GRCGYC | 2 cut(s) | 129, 830 |
| BssSI | CACGAG | 1 cut(s) | 1053 |
| BssT1I | CCWWGG | 2 cut(s) | 480, 1114 |
| Bst2BI | CACGAG | 1 cut(s) | 1053 |
| Bst2UI | CCWGG | 3 cut(s) | 509, 617, 834 |
| Bst4CI | ACNGT | 6 cut(s) | 818, 952, 1196, 1500, 1648, 1663 |
| Bst6I | CTCTTC | 2 cut(s) | 57, 1279 |
| BstACI | GRCGYC | 2 cut(s) | 129, 830 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 460 |
| BstC8I | GCNNGC | 7 cut(s) | 295, 385, 389, 428, 1356, 1654, 1696 |
| BstDEI | CTNAG | 6 cut(s) | 335, 395, 695, 1419, 1520, 1714 |
| BstDSI | CCRYGG | 2 cut(s) | 893, 1114 |
| BstF5I | GGATG | 3 cut(s) | 24, 625, 759 |
| BstFNI | CGCG | 3 cut(s) | 242, 247, 254 |
| BstH2I | RGCGCY | 1 cut(s) | 833 |
| BstHHI | GCGC | 2 cut(s) | 256, 832 |
| BstKTI | GATC | 6 cut(s) | 224, 231, 240, 874, 1457, 1513 |
| BstMAI | GTCTC | 4 cut(s) | 54, 218, 670, 1635 |
| BstMBI | GATC | 6 cut(s) | 221, 228, 237, 871, 1454, 1510 |
| BstMCI | CGRYCG | 2 cut(s) | 224, 844 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 10, 253, 294, 460, 469, 575, 944, 1217 |
| BstNI | CCWGG | 3 cut(s) | 509, 617, 834 |
| BstNSI | RCATGY | 3 cut(s) | 364, 1091, 1656 |
| BstSCI | CCNGG | 4 cut(s) | 27, 507, 615, 832 |
| BstSLI | GKGCMC | 1 cut(s) | 1498 |
| BstUI | CGCG | 3 cut(s) | 242, 247, 254 |
| BstV2I | GAAGAC | 1 cut(s) | 139 |
| BstX2I | RGATCY | 1 cut(s) | 1454 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1121, 1153 |
| BstYI | RGATCY | 1 cut(s) | 1454 |
| BstZI | CGGCCG | 1 cut(s) | 841 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1520 |
| BsuRI | GGCC | 6 cut(s) | 209, 383, 479, 595, 843, 1174 |
| BtgI | CCRYGG | 2 cut(s) | 893, 1114 |
| BtsCI | GGATG | 3 cut(s) | 24, 625, 759 |
| BtsI | GCAGTG | 2 cut(s) | 1210, 1767 |
| BtsIMutI | CAGTG | 6 cut(s) | 1153, 1210, 1386, 1392, 1632, 1767 |
| BtuMI | TCGCGA | 1 cut(s) | 247 |
| Cac8I | GCNNGC | 7 cut(s) | 295, 385, 389, 428, 1356, 1654, 1696 |
| CaiI | CAGNNNCTG | 3 cut(s) | 460, 1010, 1388 |
| CciI | TCATGA | 1 cut(s) | 1772 |
| CfoI | GCGC | 2 cut(s) | 256, 832 |
| Cfr10I | RCCGGY | 1 cut(s) | 209 |
| Cfr13I | GGNCC | 4 cut(s) | 282, 370, 501, 837 |
| CseI | GACGC | 3 cut(s) | 137, 231, 1126 |
| Csp6I | GTAC | 7 cut(s) | 124, 274, 313, 346, 1232, 1613, 1727 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 640, 675 |
| CviQI | GTAC | 7 cut(s) | 124, 274, 313, 346, 1232, 1613, 1727 |
| DdeI | CTNAG | 6 cut(s) | 335, 395, 695, 1419, 1520, 1714 |
| DinI | GGCGCC | 1 cut(s) | 831 |
| DpnI | GATC | 6 cut(s) | 223, 230, 239, 873, 1456, 1512 |
| DpnII | GATC | 6 cut(s) | 221, 228, 237, 871, 1454, 1510 |
| DraI | TTTAAA | 2 cut(s) | 523, 1101 |
| DraIII | CACNNNGTG | 1 cut(s) | 1627 |
| EaeI | YGGCCR | 2 cut(s) | 381, 841 |
| EagI | CGGCCG | 1 cut(s) | 841 |
| Eam1104I | CTCTTC | 2 cut(s) | 57, 1279 |
| EarI | CTCTTC | 2 cut(s) | 57, 1279 |
| Ecl136II | GAGCTC | 3 cut(s) | 94, 733, 1698 |
| EclXI | CGGCCG | 1 cut(s) | 841 |
| Eco130I | CCWWGG | 2 cut(s) | 480, 1114 |
| Eco147I | AGGCCT | 1 cut(s) | 479 |
| Eco24I | GRGCYC | 3 cut(s) | 96, 735, 1700 |
| Eco31I | GGTCTC | 2 cut(s) | 54, 218 |
| Eco47I | GGWCC | 4 cut(s) | 282, 370, 501, 837 |
| Eco52I | CGGCCG | 1 cut(s) | 841 |
| Eco53kI | GAGCTC | 3 cut(s) | 94, 733, 1698 |
| Eco57I | CTGAAG | 1 cut(s) | 987 |
| Eco81I | CCTNAGG | 1 cut(s) | 1520 |
| EcoICRI | GAGCTC | 3 cut(s) | 94, 733, 1698 |
| EcoO109I | RGGNCCY | 2 cut(s) | 370, 501 |
| EcoRII | CCWGG | 3 cut(s) | 507, 615, 832 |
| EcoT14I | CCWWGG | 2 cut(s) | 480, 1114 |
| EcoT38I | GRGCYC | 3 cut(s) | 96, 735, 1700 |
| EgeI | GGCGCC | 1 cut(s) | 831 |
| EheI | GGCGCC | 1 cut(s) | 831 |
| ErhI | CCWWGG | 2 cut(s) | 480, 1114 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 488, 520, 655, 687 |
| FblI | GTMKAC | 2 cut(s) | 42, 156 |
| FokI | GGATG | 3 cut(s) | 11, 612, 766 |
| FriOI | GRGCYC | 3 cut(s) | 96, 735, 1700 |
| FspBI | CTAG | 9 cut(s) | 21, 294, 408, 740, 780, 810, 1092, 1184, 1434 |
| GlaI | GCGC | 2 cut(s) | 255, 831 |
| GsuI | CTGGAG | 1 cut(s) | 788 |
| HaeII | RGCGCY | 1 cut(s) | 833 |
| HaeIII | GGCC | 6 cut(s) | 209, 383, 479, 595, 843, 1174 |
| HapII | CCGG | 4 cut(s) | 29, 210, 217, 840 |
| HgaI | GACGC | 3 cut(s) | 137, 231, 1126 |
| HhaI | GCGC | 2 cut(s) | 256, 832 |
| Hin1I | GRCGYC | 2 cut(s) | 129, 830 |
| Hin6I | GCGC | 2 cut(s) | 254, 830 |
| HinP1I | GCGC | 2 cut(s) | 254, 830 |
| HindIII | AAGCTT | 3 cut(s) | 1081, 1209, 1284 |
| HinfI | GANTC | 7 cut(s) | 249, 331, 436, 541, 632, 1076, 1527 |
| HpaII | CCGG | 4 cut(s) | 29, 210, 217, 840 |
| HphI | GGTGA | 2 cut(s) | 550, 1760 |
| Hpy166II | GTNNAC | 4 cut(s) | 43, 157, 1058, 1613 |
| Hpy8I | GTNNAC | 4 cut(s) | 43, 157, 1058, 1613 |
| Hpy99I | CGWCG | 3 cut(s) | 131, 206, 247 |
| HpyAV | CCTTC | 7 cut(s) | 514, 927, 1059, 1164, 1585, 1591, 1712 |
| HpyCH4III | ACNGT | 6 cut(s) | 818, 952, 1196, 1500, 1648, 1663 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 10, 454, 495, 1253, 1354, 1652, 1672 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 10, 253, 294, 460, 469, 575, 944, 1217 |
| HpyF3I | CTNAG | 6 cut(s) | 335, 395, 695, 1419, 1520, 1714 |
| Hsp92I | GRCGYC | 2 cut(s) | 129, 830 |
| HspAI | GCGC | 2 cut(s) | 254, 830 |
| KasI | GGCGCC | 1 cut(s) | 829 |
| Kzo9I | GATC | 6 cut(s) | 221, 228, 237, 871, 1454, 1510 |
| LguI | GCTCTTC | 1 cut(s) | 1279 |
| LmnI | GCTCC | 7 cut(s) | 99, 730, 961, 1263, 1351, 1579, 1691 |
| LweI | GCATC | 4 cut(s) | 33, 676, 744, 1015 |
| MaeI | CTAG | 9 cut(s) | 21, 294, 408, 740, 780, 810, 1092, 1184, 1434 |
| MaeIII | GTNAC | 5 cut(s) | 922, 1148, 1196, 1445, 1748 |
| MalI | GATC | 6 cut(s) | 223, 230, 239, 873, 1456, 1512 |
| MboI | GATC | 6 cut(s) | 221, 228, 237, 871, 1454, 1510 |
| MboII | GAAGA | 4 cut(s) | 44, 139, 1257, 1266 |
| MflI | RGATCY | 1 cut(s) | 1454 |
| MhlI | GDGCHC | 4 cut(s) | 96, 735, 1498, 1700 |
| MlsI | TGGCCA | 1 cut(s) | 383 |
| MluCI | AATT | 4 cut(s) | 74, 173, 1595, 1703 |
| MluNI | TGGCCA | 1 cut(s) | 383 |
| Mly113I | GGCGCC | 1 cut(s) | 830 |
| MlyI | GAGTC | 2 cut(s) | 1070, 1521 |
| MmeI | TCCRAC | 1 cut(s) | 1601 |
| Mox20I | TGGCCA | 1 cut(s) | 383 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1599 |
| MscI | TGGCCA | 1 cut(s) | 383 |
| MseI | TTAA | 5 cut(s) | 522, 849, 1100, 1442, 1505 |
| MslI | CAYNNNNRTG | 4 cut(s) | 711, 1119, 1397, 1771 |
| Msp20I | TGGCCA | 1 cut(s) | 383 |
| MspA1I | CMGCKG | 1 cut(s) | 457 |
| MspI | CCGG | 4 cut(s) | 29, 210, 217, 840 |
| MspR9I | CCNGG | 4 cut(s) | 29, 509, 617, 834 |
| MssI | GTTTAAAC | 1 cut(s) | 1101 |
| MvaI | CCWGG | 3 cut(s) | 509, 617, 834 |
| MvnI | CGCG | 3 cut(s) | 242, 247, 254 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 10, 253, 294, 460, 469, 575, 944, 1217 |
| NarI | GGCGCC | 1 cut(s) | 830 |
| NciI | CCSGG | 1 cut(s) | 29 |
| NcoI | CCATGG | 1 cut(s) | 1114 |
| NdeII | GATC | 6 cut(s) | 221, 228, 237, 871, 1454, 1510 |
| NheI | GCTAGC | 1 cut(s) | 293 |
| NlaIV | GGNNCC | 5 cut(s) | 777, 831, 838, 1158, 1300 |
| NmeAIII | GCCGAG | 1 cut(s) | 467 |
| NmuCI | GTSAC | 4 cut(s) | 1148, 1196, 1445, 1748 |
| NruI | TCGCGA | 1 cut(s) | 247 |
| NspI | RCATGY | 3 cut(s) | 364, 1091, 1656 |
| PaeI | GCATGC | 1 cut(s) | 1656 |
| PagI | TCATGA | 1 cut(s) | 1772 |
| PceI | AGGCCT | 1 cut(s) | 479 |
| PciSI | GCTCTTC | 1 cut(s) | 1279 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1599 |
| PfeI | GAWTC | 5 cut(s) | 249, 331, 436, 541, 632 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 974 |
| PfoI | TCCNGGA | 2 cut(s) | 507, 615 |
| Ple19I | CGATCG | 1 cut(s) | 224 |
| PleI | GAGTC | 2 cut(s) | 1070, 1521 |
| PluTI | GGCGCC | 1 cut(s) | 833 |
| PmeI | GTTTAAAC | 1 cut(s) | 1101 |
| PpsI | GAGTC | 2 cut(s) | 1070, 1521 |
| PpuMI | RGGWCCY | 2 cut(s) | 370, 501 |
| Psp124BI | GAGCTC | 3 cut(s) | 96, 735, 1700 |
| Psp5II | RGGWCCY | 2 cut(s) | 370, 501 |
| Psp6I | CCWGG | 3 cut(s) | 507, 615, 832 |
| PspGI | CCWGG | 3 cut(s) | 507, 615, 832 |
| PspN4I | GGNNCC | 5 cut(s) | 777, 831, 838, 1158, 1300 |
| PspPI | GGNCC | 4 cut(s) | 282, 370, 501, 837 |
| PspPPI | RGGWCCY | 2 cut(s) | 370, 501 |
| PstNI | CAGNNNCTG | 3 cut(s) | 460, 1010, 1388 |
| PsuI | RGATCY | 1 cut(s) | 1454 |
| PvuI | CGATCG | 1 cut(s) | 224 |
| PvuII | CAGCTG | 1 cut(s) | 457 |
| RruI | TCGCGA | 1 cut(s) | 247 |
| RsaI | GTAC | 7 cut(s) | 125, 275, 314, 347, 1233, 1614, 1728 |
| RsaNI | GTAC | 7 cut(s) | 124, 274, 313, 346, 1232, 1613, 1727 |
| RseI | CAYNNNNRTG | 4 cut(s) | 711, 1119, 1397, 1771 |
| SacI | GAGCTC | 3 cut(s) | 96, 735, 1700 |
| SapI | GCTCTTC | 1 cut(s) | 1279 |
| SaqAI | TTAA | 5 cut(s) | 522, 849, 1100, 1442, 1505 |
| Sau3AI | GATC | 6 cut(s) | 221, 228, 237, 871, 1454, 1510 |
| Sau96I | GGNCC | 4 cut(s) | 282, 370, 501, 837 |
| ScaI | AGTACT | 1 cut(s) | 347 |
| SchI | GAGTC | 2 cut(s) | 1070, 1521 |
| ScrFI | CCNGG | 4 cut(s) | 29, 509, 617, 834 |
| SduI | GDGCHC | 4 cut(s) | 96, 735, 1498, 1700 |
| SfaNI | GCATC | 4 cut(s) | 33, 676, 744, 1015 |
| SfoI | GGCGCC | 1 cut(s) | 831 |
| SinI | GGWCC | 4 cut(s) | 282, 370, 501, 837 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 711, 1119, 1397, 1771 |
| SmlI | CTYRAG | 2 cut(s) | 473, 1078 |
| SmoI | CTYRAG | 2 cut(s) | 473, 1078 |
| SphI | GCATGC | 1 cut(s) | 1656 |
| Sse9I | AATT | 4 cut(s) | 74, 173, 1595, 1703 |
| SseBI | AGGCCT | 1 cut(s) | 479 |
| SsiI | CCGC | 5 cut(s) | 109, 190, 844, 999, 1556 |
| SspDI | GGCGCC | 1 cut(s) | 829 |
| SspMI | CTAG | 9 cut(s) | 21, 294, 408, 740, 780, 810, 1092, 1184, 1434 |
| SstI | GAGCTC | 3 cut(s) | 96, 735, 1700 |
| StuI | AGGCCT | 1 cut(s) | 479 |
| StyD4I | CCNGG | 4 cut(s) | 27, 507, 615, 832 |
| StyI | CCWWGG | 2 cut(s) | 480, 1114 |
| TaaI | ACNGT | 6 cut(s) | 818, 952, 1196, 1500, 1648, 1663 |
| TaqI | TCGA | 1 cut(s) | 204 |
| TasI | AATT | 4 cut(s) | 74, 173, 1595, 1703 |
| TatI | WGTACW | 4 cut(s) | 273, 345, 1231, 1726 |
| TauI | GCSGC | 1 cut(s) | 846 |
| TfiI | GAWTC | 5 cut(s) | 249, 331, 436, 541, 632 |
| Tru1I | TTAA | 5 cut(s) | 522, 849, 1100, 1442, 1505 |
| Tru9I | TTAA | 5 cut(s) | 522, 849, 1100, 1442, 1505 |
| TscAI | CASTG | 6 cut(s) | 1153, 1210, 1393, 1399, 1632, 1767 |
| TseFI | GTSAC | 4 cut(s) | 1148, 1196, 1445, 1748 |
| Tsp45I | GTSAC | 4 cut(s) | 1148, 1196, 1445, 1748 |
| TspDTI | ATGAA | 8 cut(s) | 391, 455, 599, 1266, 1428, 1531, 1696, 1761 |
| TspGWI | ACGGA | 1 cut(s) | 910 |
| TspRI | CASTG | 6 cut(s) | 1153, 1210, 1393, 1399, 1632, 1767 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 974 |
| VpaK11BI | GGWCC | 4 cut(s) | 282, 370, 501, 837 |
| XapI | RAATTY | 4 cut(s) | 74, 173, 1595, 1703 |
| XbaI | TCTAGA | 1 cut(s) | 739 |
| XceI | RCATGY | 3 cut(s) | 364, 1091, 1656 |
| XmiI | GTMKAC | 2 cut(s) | 42, 156 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1599 |
| XspI | CTAG | 9 cut(s) | 21, 294, 408, 740, 780, 810, 1092, 1184, 1434 |
| ZrmI | AGTACT | 1 cut(s) | 347 |