Prupe.2G136600_v2.0.a1

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
19422909 .. 19425935
3027 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G136600.1

Sequence Viewer

Length: 1482 bp
ATGGCTTTGATTGTGGACCAGCAATCAAGCTTCAAACACTTTTGTAAAATTTGCAAGAAAGGATTTGGGTGTGGTAGAGCGCTAGGAGGGCACATGAGGGCACATGGAATAGGGGATGAAGGTCACATCGACGACGACGATCCTCCGAGTGATTGGGAGGACAAACTCGGCGGCAATGTTCCATCAACCAACAAGTGCATGTATGCCCTAAGAACAAACCCTAATCGCCTAAAGAGCTGCCGGGTTTGTGAGAATTGCGGCAAAGAGTTCTTGTCTTGGAAATCTTTCCTTGAACATGGAAAATGTAATAGCTCCATAGATGCCGAACCCCTCATGTCCTCCCCGTGCTCCGATGGGGAGGAGGGGGCCAGCGGTCGGAGAGGATGTGGGTGGTCGAAAAGGAAGAGATCGATGAGAGCCAAAGTGGGCAATTTCAATTCACACTGCCCATCAAATGAGGAAGAAGACCTTGCGAATTGCTTAATGATGTTGTCCAATGCCACGGTTGATCCTATGGAGGCTGAGCCGGAGGAGTCTTGTGCTTCAGCTAGCAAAGAAGAGGAAAGAAGAGAACCGATGAACGTCATGGCTCCTATGTCACGTGGGGTGGCCACAGACAACAATAAGGCCAAAGGGGTTGCCAACAAAGGCTTGTTTGAGTGCAAAGCATGCAAGAAAGTGTTCAATTCCCACCAAGCCTTGGGAGGTCATAGGGCTAGCCACAAGAAGGTTAAAGGGTGCTTTGCCGCTCGGCTCGATCACCTCGAAGATAGTATGGCCGACGATGATGTCATCACACATGAAGAATTCTTCCCCAATAAACCTAATTCAACCCTACAATTCGACCACGGCTCTAACACCCCGTCAGCCTATACCTCGAAGAGAAAAGCGAAGGTGCACGAATGTTCGATATGCCACCGGGTTTTCTCTTCCGGGCAGGCATTGGGCGGACACAAGAGGTGCCATTGGATCACGTCCAACGCCGCGACAGACACGTCTACATTAGCCAAGTTCCATGAGTTTCAAGAAAGTTTGGAGCAGCAAATGATGAACCAAAGGCCTAAGTTTGATGCTTCTTCGGATCCACTTGATCTGAAGCTTGATCTTAACCTACCAGCTCCGGCAGATGAGAATGGTGGAGGAAGAAGAGAACGTCCCAATCAATCAAGCTTGGAAGTCTCGACAGATTTCTTTTTACTACCATGGATTGGGACAAAAGAGGAGGACAATCCCCATCTTCACTCCTCCCACCAAAACGACAATGACAACATTAACAACGACGACAACAATAACAACAACAACAATACAAATAATAATAACACTAGTAATGATTTTTCAATGCAGAATGTGGTTGATGAAGCAGACAGTAAGGTGAAGTTAGCAAAGCTAAGTGAACTAAAGGATATCAATACCAGTGGGGGCTCCTCACCATGGTTGCAGGTGGGGCTTGGTTCAACAACTGATGTTGGAGCTGAACCATAA

Protein Analysis

494

Amino Acids

54.23

Weight (kDa)

5.87

Isoelectric Point (pI)

47.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012536)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1429
AasI GACNNNNNNGTC 2 cut(s) 788, 994
Acc36I ACCTGC 1 cut(s) 1429
AccB1I GGYRCC 1 cut(s) 960
AccB7I CCANNNNNTGG 2 cut(s) 700, 1208
AccBSI CCGCTC 1 cut(s) 749
AccI GTMKAC 1 cut(s) 998
AccII CGCG 1 cut(s) 986
AciI CCGC 6 cut(s) 171, 258, 372, 747, 948, 984
AclWI GGATC 5 cut(s) 134, 503, 977, 1076, 1089
AcoI YGGCCR 2 cut(s) 609, 777
AcsI RAATTY 2 cut(s) 48, 806
AcuI CTGAAG 2 cut(s) 528, 1115
AcvI CACGTG 1 cut(s) 602
AfeI AGCGCT 1 cut(s) 81
AfiI CCNNNNNNNGG 5 cut(s) 375, 700, 727, 1208, 1431
AflIII ACRYGT 1 cut(s) 993
AgsI TTSAA 8 cut(s) 34, 293, 436, 685, 831, 1025, 1338, 1455
AhlI ACTAGT 1 cut(s) 1322
AjiI CACGTC 2 cut(s) 975, 996
AluBI AGCT 9 cut(s) 30, 237, 312, 548, 1099, 1118, 1170, 1387, 1472
AluI AGCT 9 cut(s) 30, 237, 312, 548, 1099, 1118, 1170, 1387, 1472
Alw21I GWGCWC 2 cut(s) 350, 900
Alw26I GTCTC 1 cut(s) 1183
Alw44I GTGCAC 1 cut(s) 896
AlwI GGATC 5 cut(s) 134, 503, 977, 1076, 1089
Aor51HI AGCGCT 1 cut(s) 81
AoxI GGCC 5 cut(s) 366, 609, 627, 777, 1058
ApaLI GTGCAC 1 cut(s) 896
ApeKI GCWGC 2 cut(s) 237, 1039
ApoI RAATTY 2 cut(s) 48, 806
Asp700I GAANNNNTTC 2 cut(s) 284, 680
AspLEI GCGC 1 cut(s) 82
AspS9I GGNCC 2 cut(s) 16, 366
AsuC2I CCSGG 3 cut(s) 242, 920, 934
AsuHPI GGTGA 3 cut(s) 752, 1384, 1419
AsuNHI GCTAGC 2 cut(s) 548, 716
AvaII GGWCC 1 cut(s) 16
BaeGI GKGCMC 3 cut(s) 93, 103, 900
BalI TGGCCA 1 cut(s) 611
BamHI GGATCC 1 cut(s) 1081
BanI GGYRCC 1 cut(s) 960
BanII GRGCYC 1 cut(s) 1424
BbrPI CACGTG 1 cut(s) 602
BbsI GAAGAC 1 cut(s) 471
Bbv12I GWGCWC 2 cut(s) 350, 900
BbvI GCAGC 2 cut(s) 224, 1051
BccI CCATC 4 cut(s) 190, 347, 457, 1242
BceAI ACGGC 1 cut(s) 865
BcnI CCSGG 3 cut(s) 242, 920, 934
BcoDI GTCTC 1 cut(s) 1183
BcuI ACTAGT 1 cut(s) 1322
BfaI CTAG 4 cut(s) 83, 549, 717, 1323
BfoI RGCGCY 1 cut(s) 83
BfuAI ACCTGC 1 cut(s) 1429
BisI GCNGC 6 cut(s) 172, 238, 259, 747, 984, 1040
BlpI GCTNAGC 1 cut(s) 522
BlsI GCNGC 6 cut(s) 173, 239, 260, 748, 985, 1041
Bme1390I CCNGG 3 cut(s) 242, 920, 934
Bme18I GGWCC 1 cut(s) 16
BmgBI CACGTC 2 cut(s) 975, 996
BmgT120I GGNCC 2 cut(s) 16, 366
BmiI GGNNCC 5 cut(s) 367, 591, 962, 1083, 1423
BmrFI CCNGG 3 cut(s) 242, 920, 934
BmsI GCATC 2 cut(s) 310, 1060
BmtI GCTAGC 2 cut(s) 552, 720
BpiI GAAGAC 1 cut(s) 471
Bpu1102I GCTNAGC 1 cut(s) 522
BpuMI CCSGG 3 cut(s) 242, 920, 934
Bsa29I ATCGAT 1 cut(s) 410
BsaAI YACGTR 1 cut(s) 602
BsaJI CCNNGG 5 cut(s) 501, 699, 847, 1202, 1430
BsaXI ACNNNNNCTCC 2 cut(s) 370, 400
Bsc4I CCNNNNNNNGG 5 cut(s) 375, 700, 727, 1208, 1431
Bse1I ACTGG 1 cut(s) 1413
Bse3DI GCAATG 1 cut(s) 181
BseCI ATCGAT 1 cut(s) 410
BseDI CCNNGG 5 cut(s) 501, 699, 847, 1202, 1430
BseGI GGATG 2 cut(s) 121, 389
BseLI CCNNNNNNNGG 5 cut(s) 375, 700, 727, 1208, 1431
BseMI GCAATG 1 cut(s) 181
BseMII CTCAG 1 cut(s) 513
BseNI ACTGG 1 cut(s) 1413
BseRI GAGGAG 5 cut(s) 374, 545, 1234, 1235, 1414
BseSI GKGCMC 3 cut(s) 93, 103, 900
BseXI GCAGC 2 cut(s) 224, 1051
Bsh1236I CGCG 1 cut(s) 986
Bsh1285I CGRYCG 1 cut(s) 376
BshFI GGCC 5 cut(s) 368, 611, 629, 779, 1060
BshNI GGYRCC 1 cut(s) 960
BshVI ATCGAT 1 cut(s) 410
BsiEI CGRYCG 1 cut(s) 376
BsiHKAI GWGCWC 2 cut(s) 350, 900
BsiSI CCGG 5 cut(s) 241, 527, 919, 933, 1121
BslFI GGGAC 2 cut(s) 1140, 1225
BslI CCNNNNNNNGG 5 cut(s) 375, 700, 727, 1208, 1431
BsmAI GTCTC 1 cut(s) 1183
BsmFI GGGAC 2 cut(s) 1140, 1225
BsnI GGCC 5 cut(s) 368, 611, 629, 779, 1060
Bsp1286I GDGCHC 5 cut(s) 93, 103, 350, 900, 1424
Bsp143I GATC 8 cut(s) 139, 407, 508, 757, 969, 1081, 1090, 1102
Bsp1720I GCTNAGC 1 cut(s) 522
Bsp19I CCATGG 2 cut(s) 1202, 1430
BspACI CCGC 6 cut(s) 171, 258, 372, 747, 948, 984
BspANI GGCC 5 cut(s) 368, 611, 629, 779, 1060
BspCNI CTCAG 1 cut(s) 514
BspDI ATCGAT 1 cut(s) 410
BspFNI CGCG 1 cut(s) 986
BspLI GGNNCC 5 cut(s) 367, 591, 962, 1083, 1423
BspMI ACCTGC 1 cut(s) 1429
BspOI GCTAGC 2 cut(s) 552, 720
BspPI GGATC 5 cut(s) 134, 503, 977, 1076, 1089
BspT107I GGYRCC 1 cut(s) 960
BsrBI CCGCTC 1 cut(s) 749
BsrDI GCAATG 1 cut(s) 181
BsrI ACTGG 1 cut(s) 1413
BssECI CCNNGG 5 cut(s) 501, 699, 847, 1202, 1430
BssMI GATC 8 cut(s) 139, 407, 508, 757, 969, 1081, 1090, 1102
BssT1I CCWWGG 3 cut(s) 699, 1202, 1430
Bst4CI ACNGT 2 cut(s) 505, 1367
Bst6I CTCTTC 6 cut(s) 398, 552, 562, 875, 934, 1141
BstAPI GCANNNNNTGC 1 cut(s) 669
BstBAI YACGTR 1 cut(s) 602
BstC8I GCNNGC 5 cut(s) 370, 550, 670, 718, 939
BstDEI CTNAG 4 cut(s) 209, 522, 1062, 1388
BstDSI CCRYGG 4 cut(s) 501, 847, 1202, 1430
BstF5I GGATG 2 cut(s) 121, 389
BstFNI CGCG 1 cut(s) 986
BstH2I RGCGCY 1 cut(s) 83
BstHHI GCGC 1 cut(s) 82
BstKTI GATC 8 cut(s) 142, 410, 511, 760, 972, 1084, 1093, 1105
BstMAI GTCTC 1 cut(s) 1183
BstMBI GATC 8 cut(s) 139, 407, 508, 757, 969, 1081, 1090, 1102
BstMCI CGRYCG 1 cut(s) 376
BstMWI GCNNNNNNNGC 4 cut(s) 88, 234, 669, 1444
BstNSI RCATGY 2 cut(s) 202, 672
BstSCI CCNGG 3 cut(s) 240, 918, 932
BstSLI GKGCMC 3 cut(s) 93, 103, 900
BstUI CGCG 1 cut(s) 986
BstV1I GCAGC 2 cut(s) 224, 1051
BstV2I GAAGAC 1 cut(s) 471
BstX2I RGATCY 1 cut(s) 1081
BstYI RGATCY 1 cut(s) 1081
Bsu15I ATCGAT 1 cut(s) 410
BsuRI GGCC 5 cut(s) 368, 611, 629, 779, 1060
BsuTUI ATCGAT 1 cut(s) 410
BtgI CCRYGG 4 cut(s) 501, 847, 1202, 1430
BtrI CACGTC 2 cut(s) 975, 996
BtsCI GGATG 2 cut(s) 121, 389
BtsI GCAGTG 1 cut(s) 442
BtsIMutI CAGTG 2 cut(s) 442, 1420
BveI ACCTGC 1 cut(s) 1429
Cac8I GCNNGC 5 cut(s) 370, 550, 670, 718, 939
CfoI GCGC 1 cut(s) 82
Cfr13I GGNCC 2 cut(s) 16, 366
ClaI ATCGAT 1 cut(s) 410
CspCI CAANNNNNGTGG 2 cut(s) 1396, 1431
DdeI CTNAG 4 cut(s) 209, 522, 1062, 1388
DpnI GATC 8 cut(s) 141, 409, 510, 759, 971, 1083, 1092, 1104
DpnII GATC 8 cut(s) 139, 407, 508, 757, 969, 1081, 1090, 1102
DrdI GACNNNNNNGTC 2 cut(s) 788, 994
DseDI GACNNNNNNGTC 2 cut(s) 788, 994
EaeI YGGCCR 2 cut(s) 609, 777
Eam1104I CTCTTC 6 cut(s) 398, 552, 562, 875, 934, 1141
EarI CTCTTC 6 cut(s) 398, 552, 562, 875, 934, 1141
EciI GGCGGA 1 cut(s) 963
Eco130I CCWWGG 3 cut(s) 699, 1202, 1430
Eco147I AGGCCT 1 cut(s) 1060
Eco24I GRGCYC 1 cut(s) 1424
Eco32I GATATC 1 cut(s) 1405
Eco47I GGWCC 1 cut(s) 16
Eco47III AGCGCT 1 cut(s) 81
Eco57I CTGAAG 2 cut(s) 528, 1115
Eco72I CACGTG 1 cut(s) 602
EcoRI GAATTC 1 cut(s) 806
EcoRV GATATC 1 cut(s) 1405
EcoT14I CCWWGG 3 cut(s) 699, 1202, 1430
EcoT38I GRGCYC 1 cut(s) 1424
ErhI CCWWGG 3 cut(s) 699, 1202, 1430
FalI AAGNNNNNCTT 2 cut(s) 453, 485
FaqI GGGAC 2 cut(s) 1140, 1225
FblI GTMKAC 1 cut(s) 998
Fnu4HI GCNGC 6 cut(s) 172, 238, 259, 747, 984, 1040
FokI GGATG 2 cut(s) 128, 396
FriOI GRGCYC 1 cut(s) 1424
Fsp4HI GCNGC 6 cut(s) 172, 238, 259, 747, 984, 1040
FspBI CTAG 4 cut(s) 83, 549, 717, 1323
GlaI GCGC 1 cut(s) 81
GluI GCNGC 6 cut(s) 172, 238, 259, 747, 984, 1040
HaeII RGCGCY 1 cut(s) 83
HaeIII GGCC 5 cut(s) 368, 611, 629, 779, 1060
HapII CCGG 5 cut(s) 241, 527, 919, 933, 1121
HhaI GCGC 1 cut(s) 82
Hin6I GCGC 1 cut(s) 80
HinP1I GCGC 1 cut(s) 80
HindIII AAGCTT 3 cut(s) 28, 1097, 1168
HinfI GANTC 1 cut(s) 533
HpaII CCGG 5 cut(s) 241, 527, 919, 933, 1121
HphI GGTGA 3 cut(s) 752, 1384, 1419
Hpy166II GTNNAC 4 cut(s) 16, 898, 999, 1394
Hpy188I TCNGA 5 cut(s) 147, 352, 378, 1081, 1095
Hpy188III TCNNGA 2 cut(s) 1025, 1180
Hpy8I GTNNAC 4 cut(s) 16, 898, 999, 1394
Hpy99I CGWCG 5 cut(s) 134, 137, 140, 785, 1283
HpyAV CCTTC 3 cut(s) 113, 721, 886
HpyCH4III ACNGT 2 cut(s) 505, 1367
HpyCH4IV ACGT 5 cut(s) 582, 601, 974, 995, 1153
HpyCH4V TGCA 7 cut(s) 54, 198, 663, 672, 898, 1342, 1438
HpyF10VI GCNNNNNNNGC 4 cut(s) 88, 234, 669, 1444
HpyF3I CTNAG 4 cut(s) 209, 522, 1062, 1388
HpySE526I ACGT 5 cut(s) 582, 601, 974, 995, 1153
HspAI GCGC 1 cut(s) 80
Kzo9I GATC 8 cut(s) 139, 407, 508, 757, 969, 1081, 1090, 1102
LmnI GCTCC 7 cut(s) 317, 353, 595, 1036, 1123, 1427, 1469
Lsp1109I GCAGC 2 cut(s) 224, 1051
LweI GCATC 2 cut(s) 310, 1060
MaeI CTAG 4 cut(s) 83, 549, 717, 1323
MaeII ACGT 5 cut(s) 582, 601, 974, 995, 1153
MaeIII GTNAC 2 cut(s) 122, 597
MalI GATC 8 cut(s) 141, 409, 510, 759, 971, 1083, 1092, 1104
MbiI CCGCTC 1 cut(s) 749
MboI GATC 8 cut(s) 139, 407, 508, 757, 969, 1081, 1090, 1102
MflI RGATCY 1 cut(s) 1081
MhlI GDGCHC 5 cut(s) 93, 103, 350, 900, 1424
MlsI TGGCCA 1 cut(s) 611
MluCI AATT 9 cut(s) 48, 253, 430, 436, 475, 685, 806, 826, 839
MluNI TGGCCA 1 cut(s) 611
MlyI GAGTC 1 cut(s) 542
MmeI TCCRAC 3 cut(s) 356, 1002, 1447
Mox20I TGGCCA 1 cut(s) 611
MroXI GAANNNNTTC 2 cut(s) 284, 680
MscI TGGCCA 1 cut(s) 611
MseI TTAA 4 cut(s) 482, 732, 1107, 1272
Msp20I TGGCCA 1 cut(s) 611
MspA1I CMGCKG 1 cut(s) 372
MspI CCGG 5 cut(s) 241, 527, 919, 933, 1121
MspR9I CCNGG 3 cut(s) 242, 920, 934
MvnI CGCG 1 cut(s) 986
MwoI GCNNNNNNNGC 4 cut(s) 88, 234, 669, 1444
NciI CCSGG 3 cut(s) 242, 920, 934
NcoI CCATGG 2 cut(s) 1202, 1430
NdeII GATC 8 cut(s) 139, 407, 508, 757, 969, 1081, 1090, 1102
NheI GCTAGC 2 cut(s) 548, 716
NlaIV GGNNCC 5 cut(s) 367, 591, 962, 1083, 1423
NmeAIII GCCGAG 2 cut(s) 147, 730
NmuCI GTSAC 2 cut(s) 122, 597
NspI RCATGY 2 cut(s) 202, 672
PaeI GCATGC 1 cut(s) 672
PaqCI CACCTGC 1 cut(s) 1429
PceI AGGCCT 1 cut(s) 1060
PcsI WCGNNNNNNNCGW 2 cut(s) 135, 762
PdmI GAANNNNTTC 2 cut(s) 284, 680
PflMI CCANNNNNTGG 2 cut(s) 700, 1208
PkrI GCNGC 6 cut(s) 173, 239, 260, 748, 985, 1041
PleI GAGTC 1 cut(s) 541
PmaCI CACGTG 1 cut(s) 602
PmlI CACGTG 1 cut(s) 602
PpsI GAGTC 1 cut(s) 541
Ppu21I YACGTR 1 cut(s) 602
PspCI CACGTG 1 cut(s) 602
PspN4I GGNNCC 5 cut(s) 367, 591, 962, 1083, 1423
PspPI GGNCC 2 cut(s) 16, 366
PsuI RGATCY 1 cut(s) 1081
SaqAI TTAA 4 cut(s) 482, 732, 1107, 1272
SatI GCNGC 6 cut(s) 172, 238, 259, 747, 984, 1040
Sau3AI GATC 8 cut(s) 139, 407, 508, 757, 969, 1081, 1090, 1102
Sau96I GGNCC 2 cut(s) 16, 366
SchI GAGTC 1 cut(s) 542
ScrFI CCNGG 3 cut(s) 242, 920, 934
SduI GDGCHC 5 cut(s) 93, 103, 350, 900, 1424
SfaNI GCATC 2 cut(s) 310, 1060
SinI GGWCC 1 cut(s) 16
SpeI ACTAGT 1 cut(s) 1322
SphI GCATGC 1 cut(s) 672
Sse9I AATT 9 cut(s) 48, 253, 430, 436, 475, 685, 806, 826, 839
SseBI AGGCCT 1 cut(s) 1060
SsiI CCGC 6 cut(s) 171, 258, 372, 747, 948, 984
SspMI CTAG 4 cut(s) 83, 549, 717, 1323
StuI AGGCCT 1 cut(s) 1060
StyD4I CCNGG 3 cut(s) 240, 918, 932
StyI CCWWGG 3 cut(s) 699, 1202, 1430
TaaI ACNGT 2 cut(s) 505, 1367
TaiI ACGT 5 cut(s) 585, 604, 977, 998, 1156
TaqI TCGA 9 cut(s) 129, 395, 410, 756, 765, 843, 878, 908, 1181
TasI AATT 9 cut(s) 48, 253, 430, 436, 475, 685, 806, 826, 839
TauI GCSGC 4 cut(s) 174, 261, 749, 986
Tru1I TTAA 4 cut(s) 482, 732, 1107, 1272
Tru9I TTAA 4 cut(s) 482, 732, 1107, 1272
TscAI CASTG 2 cut(s) 449, 1420
TseFI GTSAC 2 cut(s) 122, 597
TseI GCWGC 2 cut(s) 237, 1039
Tsp45I GTSAC 2 cut(s) 122, 597
TspDTI ATGAA 5 cut(s) 132, 593, 816, 1064, 1371
TspRI CASTG 2 cut(s) 449, 1420
Van91I CCANNNNNTGG 2 cut(s) 700, 1208
VneI GTGCAC 1 cut(s) 896
VpaK11BI GGWCC 1 cut(s) 16
XapI RAATTY 2 cut(s) 48, 806
XceI RCATGY 2 cut(s) 202, 672
XmiI GTMKAC 1 cut(s) 998
XmnI GAANNNNTTC 2 cut(s) 284, 680
XspI CTAG 4 cut(s) 83, 549, 717, 1323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.