Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0012536

Physical Location & Seq

Genomic Coordinates Forward (+)

29049293 .. 29052505

Gene Structure 3213 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG182000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGCTCTGATTGTTGACCAGCAATCAAACTTCAAACACTTCTGTAAAATCTGCAAGAAAGGATTCGGGTGTGGAAGAGCGCTGGGAGGGCACATGAGGGCGCATGGAATCGGCGATGAGAGCGGCCAGATTGACGACGACGACGACCCGCCCAGCGATTGGGAGGACAAAATTGGCGGAGGCAACAACGTGCCTTCTACCAACAACAAATGCATGTACGCCTTAAGAACAAACCCTAATCGCTTGAAGACTTGCCGGAATTGCGAAAATTGTGGCAAGGAGTTCTTATCCTGGAAATCATTTCTCGAACACGGAAAATGCAGTAGCTCCGTCGATGCAGCGGAGTCTTTGGTCTCATCACCGGATTACGAAGACGACAGGAGAGGGTGCAGCGGGTGGTCTAAAAGAAAGAGATCCTTGAGAGCAAAAGTGGGTACGTTTGGTAATTCACATTGCCCATCAAGTGAGGAAGAAGATCTAGCCAACTGCTTAATGATGTTATCTAATGCAACCGTTGATCCTATGGAAGCTGAACCAGAAGAATCTTGTGCTTCAGCTAGCAAAGAAGAAGAACGAATTCGAAACCCTATGAATAATTATATGGCTCCGATTTCCCGTGGGGTGGTCGTAGACAACAACAAGGCAAAAGGGATCGCTAATAAAGGTTTGTTCGAATGCAAAGCATGCAAGAAAGTTTTTAATTCTCATCAAGCCTTGGGTGGTCATAGGGCCAGCCACAAGAAGGTTAAGGGCTGCTTTGCTGCCCGCCTCGACCACCTCGAAGATAGTATGGCAGACGACGACGTTATTACCCACGAAGAGTTCTTCCCATCGAAACCAAACTCAAGTTTACAGTTCGACCACGGGTCTAATGGCCCATCGTCAGCCTATACCTCCAAGAGAAAATCGAAGGTGCACGAGTGCTCCATATGCCACCGGATTTTCTCTTCGGGGCAGGCGTTGGGCGGGCACAAGCGGTGTCATTGGATCACGTCTAACGCAGCCCCGGACACGTCCACTTTGGCCAAGTTCCATGAGTTTCAAGAAAGCATGGAGCAGCAAATGATGAACCAACAAAGGCCTAAGTTTGATACCACTTCTGATCCACTCGATCTCAAGCTTGATCTAAACCTTCCCGCTCCCGCTGCGGATGAGAATGGCGGAGGAGGAGGAAGAAGAGATCATCCGATTACAAATCCAAATCCATCAAGCCTAGAGGTGTCTACAGATTTTTTTTTACAGTCTTGGGTGGGGACAAAAGAGGAGGACAATCCCCATCATCGTCTTCACTCCCACAACCAAATTGACAACGACAACAACATTATTAACAACGACGAATATAATGTTGATAACAACAATAATAGCAGTGGTTCAATGCAGAATGTGGTGGATGAAGCAGACAGTAAGGTAAAGTTAGCAAAGCTAAGTGAACTAAAGGATATCAACACAAGTGGGAGTTCCTCGCCATGGTTGCAAGTGGGGCTTGGTTCAACAACTAATGTTGCAGCTGACCCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051704 GO:0055046 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2_6

Protein Analysis

505

Amino Acids

55.48

Weight (kDa)

5.9

Isoelectric Point (pI)

45.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C2H2_6	PF13912	224 - 248	1.5e-09	C2H2-type zinc finger
zf-C2H2_6	PF13912	305 - 329	1.3e-10	C2H2-type zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012536)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02040
fragaria_vesca	FvH4_7g10970
malus_domestica	MD02G1211300.v1.1 MD07G1113900.v1.1
prunus_persica	Prupe.2G136600_v2.0.a1 Prupe.2G136600_v2.0.a1
pyrus_communis	pycom07g09880 pycom1755g00040
rosa_chinensis	RchiOBHm_Chr1g0348911
rosa_laevigata	RLG00000028618
rosa_multiflora	Rmu_sc0000156.1_g000017
rosa_roxburghii	Rroxscaffold_4G00306530
rosa_rugosa	Rorug01G0198400
rosa_samantha	Rh1AG215800 Rh1BG182000 Rh1CG200200 Rh1DG211800
rosa_wichuraiana	Rw1G018290 Rw1G018400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	159
AccBSI	CCGCTC	2 cut(s)	123, 1139
AccI	GTMKAC	2 cut(s)	630, 1223
AclWI	GGATC	5 cut(s)	408, 512, 659, 995, 1097
AcoI	YGGCCR	2 cut(s)	124, 1023
AcsI	RAATTY	1 cut(s)	576
AcuI	CTGAAG	1 cut(s)	537
AfaI	GTAC	2 cut(s)	218, 436
AfeI	AGCGCT	1 cut(s)	81
AfiI	CCNNNNNNNGG	4 cut(s)	159, 622, 742, 1467
AflII	CTTAAG	1 cut(s)	223
AflIII	ACRYGT	1 cut(s)	1011
AgsI	TTSAA	5 cut(s)	34, 247, 1043, 1374, 1491
AhdI	GACNNNNNGTC	1 cut(s)	865
AjiI	CACGTC	2 cut(s)	993, 1014
AjnI	CCWGG	1 cut(s)	290
AluBI	AGCT	6 cut(s)	327, 530, 557, 1120, 1423, 1508
AluI	AGCT	6 cut(s)	327, 530, 557, 1120, 1423, 1508
Alw21I	GWGCWC	2 cut(s)	918, 926
Alw26I	GTCTC	1 cut(s)	358
Alw44I	GTGCAC	1 cut(s)	914
AlwI	GGATC	5 cut(s)	408, 512, 659, 995, 1097
Aor51HI	AGCGCT	1 cut(s)	81
AoxI	GGCC	5 cut(s)	124, 729, 874, 1023, 1079
ApaLI	GTGCAC	1 cut(s)	914
ApeKI	GCWGC	8 cut(s)	338, 390, 753, 761, 1001, 1057, 1145, 1505
ApoI	RAATTY	1 cut(s)	576
Asp700I	GAANNNNTTC	2 cut(s)	62, 576
AspLEI	GCGC	2 cut(s)	82, 103
AspS9I	GGNCC	2 cut(s)	729, 875
AsuC2I	CCSGG	1 cut(s)	1007
AsuHPI	GGTGA	1 cut(s)	351
AsuII	TTCGAA	2 cut(s)	580, 672
AsuNHI	GCTAGC	1 cut(s)	557
BaeGI	GKGCMC	3 cut(s)	93, 918, 972
BalI	TGGCCA	1 cut(s)	1025
BauI	CACGAG	1 cut(s)	917
BbsI	GAAGAC	3 cut(s)	254, 378, 1277
Bbv12I	GWGCWC	2 cut(s)	918, 926
BbvI	GCAGC	7 cut(s)	350, 402, 740, 748, 1013, 1069, 1132
BccI	CCATC	5 cut(s)	466, 838, 886, 1213, 1284
BciT130I	CCWGG	1 cut(s)	292
BcnI	CCSGG	1 cut(s)	1007
BcoDI	GTCTC	1 cut(s)	358
BfaI	CTAG	3 cut(s)	479, 558, 1214
BfmI	CTRYAG	1 cut(s)	1224
BfoI	RGCGCY	1 cut(s)	83
BfrI	CTTAAG	1 cut(s)	223
BglII	AGATCT	1 cut(s)	475
BisI	GCNGC	9 cut(s)	124, 339, 391, 754, 762, 1002, 1058, 1146, 1506
BlsI	GCNGC	9 cut(s)	125, 340, 392, 755, 763, 1003, 1059, 1147, 1507
Bme1390I	CCNGG	2 cut(s)	292, 1007
BmeRI	GACNNNNNGTC	1 cut(s)	865
BmgBI	CACGTC	2 cut(s)	993, 1014
BmgT120I	GGNCC	2 cut(s)	729, 875
BmiI	GGNNCC	1 cut(s)	606
BmrFI	CCNGG	2 cut(s)	292, 1007
BmsI	GCATC	1 cut(s)	325
BmtI	GCTAGC	1 cut(s)	561
BpiI	GAAGAC	3 cut(s)	254, 378, 1277
Bpu14I	TTCGAA	2 cut(s)	580, 672
BpuEI	CTTGAG	3 cut(s)	439, 829, 1100
BpuMI	CCSGG	1 cut(s)	1007
BsaI	GGTCTC	1 cut(s)	358
BsaJI	CCNNGG	5 cut(s)	616, 714, 862, 1005, 1466
BsaWI	WCCGGW	2 cut(s)	361, 936
BsaXI	ACNNNNNCTCC	2 cut(s)	908, 938
Bsc4I	CCNNNNNNNGG	4 cut(s)	159, 622, 742, 1467
Bse3DI	GCAATG	1 cut(s)	451
BseBI	CCWGG	1 cut(s)	292
BseDI	CCNNGG	5 cut(s)	616, 714, 862, 1005, 1466
BseGI	GGATG	3 cut(s)	1156, 1183, 1396
BseLI	CCNNNNNNNGG	4 cut(s)	159, 622, 742, 1467
BseMI	GCAATG	1 cut(s)	451
BseRI	GAGGAG	3 cut(s)	1179, 1182, 1277
BseSI	GKGCMC	3 cut(s)	93, 918, 972
BseXI	GCAGC	7 cut(s)	350, 402, 740, 748, 1013, 1069, 1132
BseYI	CCCAGC	2 cut(s)	82, 152
BsgI	GTGCAG	1 cut(s)	409
BshFI	GGCC	5 cut(s)	126, 731, 876, 1025, 1081
BsiHKAI	GWGCWC	2 cut(s)	918, 926
BsiSI	CCGG	4 cut(s)	256, 362, 937, 1007
BslFI	GGGAC	1 cut(s)	1267
BslI	CCNNNNNNNGG	4 cut(s)	159, 622, 742, 1467
BsmAI	GTCTC	1 cut(s)	358
BsmFI	GGGAC	1 cut(s)	1267
BsmI	GAATGC	1 cut(s)	680
BsnI	GGCC	5 cut(s)	126, 731, 876, 1025, 1081
Bso31I	GGTCTC	1 cut(s)	358
Bsp119I	TTCGAA	2 cut(s)	580, 672
Bsp1286I	GDGCHC	4 cut(s)	93, 918, 926, 972
Bsp143I	GATC	9 cut(s)	413, 475, 517, 651, 987, 1102, 1111, 1123, 1180
Bsp19I	CCATGG	1 cut(s)	1466
BspANI	GGCC	5 cut(s)	126, 731, 876, 1025, 1081
BspLI	GGNNCC	1 cut(s)	606
BspOI	GCTAGC	1 cut(s)	561
BspPI	GGATC	5 cut(s)	408, 512, 659, 995, 1097
BspQI	GCTCTTC	1 cut(s)	70
BspT104I	TTCGAA	2 cut(s)	580, 672
BspTI	CTTAAG	1 cut(s)	223
BspTNI	GGTCTC	1 cut(s)	358
BsrBI	CCGCTC	2 cut(s)	123, 1139
BsrDI	GCAATG	1 cut(s)	451
BssECI	CCNNGG	5 cut(s)	616, 714, 862, 1005, 1466
BssMI	GATC	9 cut(s)	413, 475, 517, 651, 987, 1102, 1111, 1123, 1180
BssSI	CACGAG	1 cut(s)	917
BssT1I	CCWWGG	2 cut(s)	714, 1466
Bst2BI	CACGAG	1 cut(s)	917
Bst2UI	CCWGG	1 cut(s)	292
Bst4CI	ACNGT	4 cut(s)	514, 855, 1242, 1403
Bst6I	CTCTTC	4 cut(s)	70, 813, 952, 1171
BstAFI	CTTAAG	1 cut(s)	223
BstAPI	GCANNNNNTGC	1 cut(s)	684
BstBI	TTCGAA	2 cut(s)	580, 672
BstC8I	GCNNGC	6 cut(s)	559, 685, 733, 766, 957, 968
BstDEI	CTNAG	2 cut(s)	1083, 1424
BstDSI	CCRYGG	3 cut(s)	616, 862, 1466
BstF5I	GGATG	3 cut(s)	1156, 1183, 1396
BstH2I	RGCGCY	1 cut(s)	83
BstHHI	GCGC	2 cut(s)	82, 103
BstKTI	GATC	9 cut(s)	416, 478, 520, 654, 990, 1105, 1114, 1126, 1183
BstMAI	GTCTC	1 cut(s)	358
BstMBI	GATC	9 cut(s)	413, 475, 517, 651, 987, 1102, 1111, 1123, 1180
BstMWI	GCNNNNNNNGC	8 cut(s)	88, 120, 261, 684, 930, 1145, 1471, 1480
BstNI	CCWGG	1 cut(s)	292
BstNSI	RCATGY	2 cut(s)	217, 687
BstSCI	CCNGG	2 cut(s)	290, 1005
BstSFI	CTRYAG	1 cut(s)	1224
BstSLI	GKGCMC	3 cut(s)	93, 918, 972
BstV1I	GCAGC	7 cut(s)	350, 402, 740, 748, 1013, 1069, 1132
BstV2I	GAAGAC	3 cut(s)	254, 378, 1277
BstX2I	RGATCY	2 cut(s)	413, 475
BstYI	RGATCY	2 cut(s)	413, 475
BsuRI	GGCC	5 cut(s)	126, 731, 876, 1025, 1081
BtgI	CCRYGG	3 cut(s)	616, 862, 1466
BtgZI	GCGATG	1 cut(s)	129
BtrI	CACGTC	2 cut(s)	993, 1014
BtsCI	GGATG	3 cut(s)	1156, 1183, 1396
BtsI	GCAGTG	1 cut(s)	1372
BtsIMutI	CAGTG	1 cut(s)	1372
Cac8I	GCNNGC	6 cut(s)	559, 685, 733, 766, 957, 968
CfoI	GCGC	2 cut(s)	82, 103
Cfr13I	GGNCC	2 cut(s)	729, 875
Csp6I	GTAC	2 cut(s)	217, 435
CspCI	CAANNNNNGTGG	2 cut(s)	1432, 1467
CviAII	CATG	7 cut(s)	94, 104, 214, 684, 1034, 1051, 1467
CviQI	GTAC	2 cut(s)	217, 435
DdeI	CTNAG	2 cut(s)	1083, 1424
DpnI	GATC	9 cut(s)	415, 477, 519, 653, 989, 1104, 1113, 1125, 1182
DpnII	GATC	9 cut(s)	413, 475, 517, 651, 987, 1102, 1111, 1123, 1180
DriI	GACNNNNNGTC	1 cut(s)	865
EaeI	YGGCCR	2 cut(s)	124, 1023
Eam1104I	CTCTTC	4 cut(s)	70, 813, 952, 1171
Eam1105I	GACNNNNNGTC	1 cut(s)	865
EarI	CTCTTC	4 cut(s)	70, 813, 952, 1171
EciI	GGCGGA	2 cut(s)	192, 1176
Eco130I	CCWWGG	2 cut(s)	714, 1466
Eco147I	AGGCCT	1 cut(s)	1081
Eco31I	GGTCTC	1 cut(s)	358
Eco32I	GATATC	1 cut(s)	1441
Eco47III	AGCGCT	1 cut(s)	81
Eco57I	CTGAAG	1 cut(s)	537
EcoRI	GAATTC	1 cut(s)	576
EcoRII	CCWGG	1 cut(s)	290
EcoRV	GATATC	1 cut(s)	1441
EcoT14I	CCWWGG	2 cut(s)	714, 1466
EcoT22I	ATGCAT	1 cut(s)	215
ErhI	CCWWGG	2 cut(s)	714, 1466
FaeI	CATG	7 cut(s)	97, 107, 217, 687, 1037, 1054, 1470
FalI	AAGNNNNNCTT	8 cut(s)	269, 301, 401, 433, 740, 772, 1467, 1499
FaqI	GGGAC	1 cut(s)	1267
FatI	CATG	7 cut(s)	93, 103, 213, 683, 1033, 1050, 1466
FauI	CCCGC	6 cut(s)	156, 386, 773, 959, 1144, 1150
FauNDI	CATATG	1 cut(s)	929
FblI	GTMKAC	2 cut(s)	630, 1223
Fnu4HI	GCNGC	9 cut(s)	124, 339, 391, 754, 762, 1002, 1058, 1146, 1506
FokI	GGATG	3 cut(s)	1163, 1170, 1403
Fsp4HI	GCNGC	9 cut(s)	124, 339, 391, 754, 762, 1002, 1058, 1146, 1506
FspBI	CTAG	3 cut(s)	479, 558, 1214
GlaI	GCGC	2 cut(s)	81, 102
GluI	GCNGC	9 cut(s)	124, 339, 391, 754, 762, 1002, 1058, 1146, 1506
GsaI	CCCAGC	2 cut(s)	86, 156
HaeII	RGCGCY	1 cut(s)	83
HaeIII	GGCC	5 cut(s)	126, 731, 876, 1025, 1081
HapII	CCGG	4 cut(s)	256, 362, 937, 1007
HhaI	GCGC	2 cut(s)	82, 103
Hin1II	CATG	7 cut(s)	97, 107, 217, 687, 1037, 1054, 1470
Hin6I	GCGC	2 cut(s)	80, 101
HinP1I	GCGC	2 cut(s)	80, 101
HincII	GTYRAC	1 cut(s)	16
HindII	GTYRAC	1 cut(s)	16
HindIII	AAGCTT	1 cut(s)	1118
HinfI	GANTC	4 cut(s)	63, 108, 344, 542
HpaII	CCGG	4 cut(s)	256, 362, 937, 1007
HphI	GGTGA	1 cut(s)	351
Hpy166II	GTNNAC	7 cut(s)	16, 631, 851, 916, 1017, 1224, 1430
Hpy188I	TCNGA	4 cut(s)	9, 609, 1102, 1188
Hpy188III	TCNNGA	2 cut(s)	305, 1043
Hpy8I	GTNNAC	7 cut(s)	16, 631, 851, 916, 1017, 1224, 1430
Hpy99I	CGWCG	7 cut(s)	140, 143, 146, 335, 803, 806, 1337
HpyAV	CCTTC	4 cut(s)	204, 736, 904, 1142
HpyCH4III	ACNGT	4 cut(s)	514, 855, 1242, 1403
HpyCH4IV	ACGT	5 cut(s)	189, 437, 804, 992, 1013
HpyF10VI	GCNNNNNNNGC	8 cut(s)	88, 120, 261, 684, 930, 1145, 1471, 1480
HpyF3I	CTNAG	2 cut(s)	1083, 1424
HpySE526I	ACGT	5 cut(s)	189, 437, 804, 992, 1013
Hsp92II	CATG	7 cut(s)	97, 107, 217, 687, 1037, 1054, 1470
HspAI	GCGC	2 cut(s)	80, 101
Kzo9I	GATC	9 cut(s)	413, 475, 517, 651, 987, 1102, 1111, 1123, 1180
LguI	GCTCTTC	1 cut(s)	70
LmnI	GCTCC	5 cut(s)	332, 610, 929, 1054, 1144
Lsp1109I	GCAGC	7 cut(s)	350, 402, 740, 748, 1013, 1069, 1132
LweI	GCATC	1 cut(s)	325
MaeI	CTAG	3 cut(s)	479, 558, 1214
MaeII	ACGT	5 cut(s)	189, 437, 804, 992, 1013
MalI	GATC	9 cut(s)	415, 477, 519, 653, 989, 1104, 1113, 1125, 1182
MbiI	CCGCTC	2 cut(s)	123, 1139
MboI	GATC	9 cut(s)	413, 475, 517, 651, 987, 1102, 1111, 1123, 1180
MflI	RGATCY	2 cut(s)	413, 475
MhlI	GDGCHC	4 cut(s)	93, 918, 926, 972
MlsI	TGGCCA	1 cut(s)	1025
MluCI	AATT	8 cut(s)	171, 259, 268, 445, 576, 595, 700, 1302
MluNI	TGGCCA	1 cut(s)	1025
MlyI	GAGTC	1 cut(s)	353
Mox20I	TGGCCA	1 cut(s)	1025
Mph1103I	ATGCAT	1 cut(s)	215
MroXI	GAANNNNTTC	2 cut(s)	62, 576
MscI	TGGCCA	1 cut(s)	1025
MseI	TTAA	5 cut(s)	224, 491, 699, 747, 1326
Msp20I	TGGCCA	1 cut(s)	1025
MspA1I	CMGCKG	4 cut(s)	341, 393, 1145, 1508
MspCI	CTTAAG	1 cut(s)	223
MspI	CCGG	4 cut(s)	256, 362, 937, 1007
MspR9I	CCNGG	2 cut(s)	292, 1007
Mva1269I	GAATGC	1 cut(s)	680
MvaI	CCWGG	1 cut(s)	292
MwoI	GCNNNNNNNGC	8 cut(s)	88, 120, 261, 684, 930, 1145, 1471, 1480
NciI	CCSGG	1 cut(s)	1007
NcoI	CCATGG	1 cut(s)	1466
NdeI	CATATG	1 cut(s)	929
NdeII	GATC	9 cut(s)	413, 475, 517, 651, 987, 1102, 1111, 1123, 1180
NheI	GCTAGC	1 cut(s)	557
NlaIII	CATG	7 cut(s)	97, 107, 217, 687, 1037, 1054, 1470
NlaIV	GGNNCC	1 cut(s)	606
NsiI	ATGCAT	1 cut(s)	215
NspI	RCATGY	2 cut(s)	217, 687
NspV	TTCGAA	2 cut(s)	580, 672
PaeI	GCATGC	1 cut(s)	687
PceI	AGGCCT	1 cut(s)	1081
PciSI	GCTCTTC	1 cut(s)	70
PcsI	WCGNNNNNNNCGW	3 cut(s)	141, 777, 956
PctI	GAATGC	1 cut(s)	680
PdmI	GAANNNNTTC	2 cut(s)	62, 576
PfeI	GAWTC	3 cut(s)	63, 108, 542
PflMI	CCANNNNNTGG	1 cut(s)	159
PfoI	TCCNGGA	1 cut(s)	290
PkrI	GCNGC	9 cut(s)	125, 340, 392, 755, 763, 1003, 1059, 1147, 1507
PleI	GAGTC	1 cut(s)	352
PpsI	GAGTC	1 cut(s)	352
Psp6I	CCWGG	1 cut(s)	290
PspFI	CCCAGC	2 cut(s)	82, 152
PspGI	CCWGG	1 cut(s)	290
PspN4I	GGNNCC	1 cut(s)	606
PspPI	GGNCC	2 cut(s)	729, 875
PsuI	RGATCY	2 cut(s)	413, 475
PvuII	CAGCTG	1 cut(s)	1508
RsaI	GTAC	2 cut(s)	218, 436
RsaNI	GTAC	2 cut(s)	217, 435
SapI	GCTCTTC	1 cut(s)	70
SaqAI	TTAA	5 cut(s)	224, 491, 699, 747, 1326
SatI	GCNGC	9 cut(s)	124, 339, 391, 754, 762, 1002, 1058, 1146, 1506
Sau3AI	GATC	9 cut(s)	413, 475, 517, 651, 987, 1102, 1111, 1123, 1180
Sau96I	GGNCC	2 cut(s)	729, 875
SchI	GAGTC	1 cut(s)	353
ScrFI	CCNGG	2 cut(s)	292, 1007
SduI	GDGCHC	4 cut(s)	93, 918, 926, 972
SfaNI	GCATC	1 cut(s)	325
SfcI	CTRYAG	1 cut(s)	1224
SfuI	TTCGAA	2 cut(s)	580, 672
SmlI	CTYRAG	4 cut(s)	223, 418, 844, 1115
SmoI	CTYRAG	4 cut(s)	223, 418, 844, 1115
SphI	GCATGC	1 cut(s)	687
Sse9I	AATT	8 cut(s)	171, 259, 268, 445, 576, 595, 700, 1302
SseBI	AGGCCT	1 cut(s)	1081
SspMI	CTAG	3 cut(s)	479, 558, 1214
StuI	AGGCCT	1 cut(s)	1081
StyD4I	CCNGG	2 cut(s)	290, 1005
StyI	CCWWGG	2 cut(s)	714, 1466
TaaI	ACNGT	4 cut(s)	514, 855, 1242, 1403
TaiI	ACGT	5 cut(s)	192, 440, 807, 995, 1016
TasI	AATT	8 cut(s)	171, 259, 268, 445, 576, 595, 700, 1302
TauI	GCSGC	1 cut(s)	126
TfiI	GAWTC	3 cut(s)	63, 108, 542
Tru1I	TTAA	5 cut(s)	224, 491, 699, 747, 1326
Tru9I	TTAA	5 cut(s)	224, 491, 699, 747, 1326
TscAI	CASTG	1 cut(s)	1372
TseI	GCWGC	8 cut(s)	338, 390, 753, 761, 1001, 1057, 1145, 1505
TspDTI	ATGAA	3 cut(s)	605, 1082, 1407
TspGWI	ACGGA	2 cut(s)	319, 327
TspRI	CASTG	1 cut(s)	1372
Van91I	CCANNNNNTGG	1 cut(s)	159
Vha464I	CTTAAG	1 cut(s)	223
VneI	GTGCAC	1 cut(s)	914
XapI	RAATTY	1 cut(s)	576
XceI	RCATGY	2 cut(s)	217, 687
XcmI	CCANNNNNNNNNTGG	1 cut(s)	869
XmiI	GTMKAC	2 cut(s)	630, 1223
XmnI	GAANNNNTTC	2 cut(s)	62, 576
XspI	CTAG	3 cut(s)	479, 558, 1214
Zsp2I	ATGCAT	1 cut(s)	215

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.