Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000156.1

Orthogroup ID

OG0012536

Physical Location & Seq

Genomic Coordinates Forward (+)

80280 .. 84500

Gene Structure 4221 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000156.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

atggctctgattgttgaccagcaatcaaacttcaaacacttctgtaaaatctgcaagaaaggattcgggtgtggaagagcgctgggagggcacatgagggcgcatggaatcggcgatgagagcggccagattgacgacgacgacgacccgcccagcgattgggaggacaaaatcggcggaggcaacaacgtgccttctaccaacaacaaatgcatgtacgccttaagaacaaaccctaatcgcttgaagacttgccggaattgcgaaaattgtggcaaggagttcttatcctggaaatcatttctcgaacacggaaaatgcagtagctccatcgatgcagcggagtctttggtctcatcaccggattacgaagacgacaggagagggtgcagcgggtggtctaaaagaaagagatccttgagagcaaaagtgggtacgtttggtaattcacattgcccatcaagtgaggaagaagatctagccaactgcttaatgatgttatcgaatgcaaccgttgatcctatggaagctgaaccagaagaatcttgtgcttcagctagcaaagaagaagaacgaattcgaaaccctatgaataattatatggctccgatttcccgtggggtggtcgtagacaacaacaaggcaaaagggatcgctaataaaggtttgttcgaatgcaaagcatgcaagaaagtttttaattctcatcaagccttgggtggtcatagggccagccacaagaaggttaagggctgctttgctgcccgcctcgaccacctcgaagatagtatggcagacgacgacgttattacccacgaagagttcttcccatcgaaaccaaactcaagtttacagttcgaccacgggtctaatggcccatcgtcagcctatacctccaagagaaaatcgaaggtgcacgagtgctccatatgccaccggattttctcttcggggcaggcgttgggcgggcacaagcggtgtcattggatcacgtctaacgcagccccggacacgtccactttggccaagttccatgagtttcaagaaagcatggagcagcaaatgatgaaccaacaaaggcctaagtttgataccacttctgatccactcgatctcaagcttgatctaaaccttcccgctcccgctgcggatgagaacggcggaggaggaggaagaagagatcgtccgattacaaatccaaatccatcaagcctagaggtgtctacagatttttttttacagtcttgggtggggacaaaagaggaggacaatctccatcatcgtcttcactcccacaaccaaattgacaacgacaacaacattattaacaacgacgaatataatgttgataacaacaataatagcagtggctcaatgcagaatgtggtggatgaagcagacagtaaggtaaagttagcaaagctaagtgaactaaaggatatcaacacaagtgggagttcctcgccatggttgcaagtggggcttggttcaacaactaatgttgcagctgacccgaaccctacatttatttgttccagcagagagaaaaacaaggtaagtgcactagctatcactggatcagagtacttatattccacttcggctcggctcggggcgcgacggagcggcggaggttgccggaaggatgccaggggtcgggcggagaggtctgcagtcggtggagtcgccggcgacgtcattgcagcgctgcccagaaaacctgcagttgcaggtcgggttgctgcccagaacctgcaactccgacctcctctgacctcgaacgctgcccagacccgtccgcaagcctccggcctccgtccgccaagccccgagccgccgtcgccgcctggaacgccgctgctgcatccgagaagttccgatcatcgtcatcgtagctggtcctcggggcgttgctgcgttggtgttgaagaagcaagaaacataaggagagtcatgtgctcgtcgtcttcatcataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051704 GO:0055046 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2_6

Protein Analysis

658

Amino Acids

71.62

Weight (kDa)

7.96

Isoelectric Point (pI)

52.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012536)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02040
fragaria_vesca	FvH4_7g10970
malus_domestica	MD02G1211300.v1.1 MD07G1113900.v1.1
prunus_persica	Prupe.2G136600_v2.0.a1 Prupe.2G136600_v2.0.a1
pyrus_communis	pycom07g09880 pycom1755g00040
rosa_chinensis	RchiOBHm_Chr1g0348911
rosa_laevigata	RLG00000028618
rosa_multiflora	Rmu_sc0000156.1_g000017
rosa_roxburghii	Rroxscaffold_4G00306530
rosa_rugosa	Rorug01G0198400
rosa_samantha	Rh1AG215800 Rh1BG182000 Rh1CG200200 Rh1DG211800
rosa_wichuraiana	Rw1G018290 Rw1G018400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1698
Acc36I	ACCTGC	3 cut(s)	1721, 1729, 1761
AccB7I	CCANNNNNTGG	1 cut(s)	159
AccBSI	CCGCTC	3 cut(s)	123, 1139, 1626
AccI	GTMKAC	2 cut(s)	630, 1223
AccII	CGCG	1 cut(s)	1618
AclWI	GGATC	6 cut(s)	408, 512, 659, 995, 1097, 1585
AcoI	YGGCCR	2 cut(s)	124, 1023
AcsI	RAATTY	1 cut(s)	576
AcuI	CTGAAG	1 cut(s)	537
AcyI	GRCGYC	1 cut(s)	1695
AfaI	GTAC	3 cut(s)	218, 436, 1586
AfeI	AGCGCT	2 cut(s)	81, 1707
AfiI	CCNNNNNNNGG	5 cut(s)	159, 622, 742, 1467, 1656
AflII	CTTAAG	1 cut(s)	223
AflIII	ACRYGT	1 cut(s)	1011
AgsI	TTSAA	5 cut(s)	34, 247, 1043, 1491, 1928
AhdI	GACNNNNNGTC	1 cut(s)	865
AjiI	CACGTC	2 cut(s)	993, 1014
AjnI	CCWGG	3 cut(s)	290, 1649, 1846
AluBI	AGCT	8 cut(s)	327, 530, 557, 1120, 1423, 1508, 1568, 1896
AluI	AGCT	8 cut(s)	327, 530, 557, 1120, 1423, 1508, 1568, 1896
Alw21I	GWGCWC	4 cut(s)	918, 926, 1564, 1961
Alw26I	GTCTC	1 cut(s)	358
Alw44I	GTGCAC	2 cut(s)	914, 1560
AlwI	GGATC	6 cut(s)	408, 512, 659, 995, 1097, 1585
AlwNI	CAGNNNCTG	1 cut(s)	1753
Ama87I	CYCGRG	3 cut(s)	1610, 1829, 1903
Aor51HI	AGCGCT	2 cut(s)	81, 1707
AoxI	GGCC	6 cut(s)	124, 729, 874, 1023, 1079, 1810
ApaLI	GTGCAC	2 cut(s)	914, 1560
ApoI	RAATTY	1 cut(s)	576
Asp700I	GAANNNNTTC	2 cut(s)	62, 576
AspLEI	GCGC	4 cut(s)	82, 103, 1618, 1708
AspS9I	GGNCC	3 cut(s)	729, 875, 1899
AsuC2I	CCSGG	1 cut(s)	1007
AsuHPI	GGTGA	1 cut(s)	351
AsuII	TTCGAA	2 cut(s)	580, 672
AsuNHI	GCTAGC	1 cut(s)	557
AvaI	CYCGRG	3 cut(s)	1610, 1829, 1903
AvaII	GGWCC	1 cut(s)	1899
BaeGI	GKGCMC	4 cut(s)	93, 918, 972, 1564
BalI	TGGCCA	1 cut(s)	1025
BauI	CACGAG	1 cut(s)	917
BbsI	GAAGAC	4 cut(s)	254, 378, 1277, 1959
Bbv12I	GWGCWC	4 cut(s)	918, 926, 1564, 1961
BccI	CCATC	6 cut(s)	338, 466, 838, 886, 1213, 1284
BceAI	ACGGC	2 cut(s)	1174, 1822
BcgI	CGANNNNNNTGC	2 cut(s)	1682, 1716
BciT130I	CCWGG	3 cut(s)	292, 1651, 1848
BcnI	CCSGG	1 cut(s)	1007
BcoDI	GTCTC	1 cut(s)	358
BfaI	CTAG	4 cut(s)	479, 558, 1214, 1565
BfmI	CTRYAG	3 cut(s)	1224, 1671, 1722
BfoI	RGCGCY	2 cut(s)	83, 1709
BfrI	CTTAAG	1 cut(s)	223
BfuAI	ACCTGC	3 cut(s)	1721, 1729, 1761
BglII	AGATCT	1 cut(s)	475
BmcAI	AGTACT	1 cut(s)	1586
Bme1390I	CCNGG	4 cut(s)	292, 1007, 1651, 1848
Bme18I	GGWCC	1 cut(s)	1899
BmeRI	GACNNNNNGTC	1 cut(s)	865
BmeT110I	CYCGRG	3 cut(s)	1610, 1829, 1903
BmgBI	CACGTC	2 cut(s)	993, 1014
BmgT120I	GGNCC	3 cut(s)	729, 875, 1899
BmiI	GGNNCC	1 cut(s)	606
BmrFI	CCNGG	4 cut(s)	292, 1007, 1651, 1848
BmsI	GCATC	3 cut(s)	325, 1636, 1873
BmtI	GCTAGC	1 cut(s)	561
BpiI	GAAGAC	4 cut(s)	254, 378, 1277, 1959
Bpu14I	TTCGAA	2 cut(s)	580, 672
BpuEI	CTTGAG	3 cut(s)	439, 829, 1100
BpuMI	CCSGG	1 cut(s)	1007
Bsa29I	ATCGAT	1 cut(s)	333
BsaHI	GRCGYC	1 cut(s)	1695
BsaI	GGTCTC	1 cut(s)	358
BsaJI	CCNNGG	7 cut(s)	616, 714, 862, 1005, 1466, 1650, 1902
BsaWI	WCCGGW	2 cut(s)	361, 936
BsaXI	ACNNNNNCTCC	2 cut(s)	908, 938
Bsc4I	CCNNNNNNNGG	5 cut(s)	159, 622, 742, 1467, 1656
Bse118I	RCCGGY	1 cut(s)	1688
Bse1I	ACTGG	1 cut(s)	1579
Bse3DI	GCAATG	2 cut(s)	451, 1698
BseBI	CCWGG	3 cut(s)	292, 1651, 1848
BseCI	ATCGAT	1 cut(s)	333
BseDI	CCNNGG	7 cut(s)	616, 714, 862, 1005, 1466, 1650, 1902
BseGI	GGATG	4 cut(s)	1156, 1396, 1651, 1864
BseLI	CCNNNNNNNGG	5 cut(s)	159, 622, 742, 1467, 1656
BseMI	GCAATG	2 cut(s)	451, 1698
BseNI	ACTGG	1 cut(s)	1579
BseRI	GAGGAG	4 cut(s)	1179, 1182, 1277, 1758
BseSI	GKGCMC	4 cut(s)	93, 918, 972, 1564
BseYI	CCCAGC	2 cut(s)	82, 152
BsgI	GTGCAG	1 cut(s)	409
Bsh1236I	CGCG	1 cut(s)	1618
BshFI	GGCC	6 cut(s)	126, 731, 876, 1025, 1081, 1812
BshVI	ATCGAT	1 cut(s)	333
BsiHKAI	GWGCWC	4 cut(s)	918, 926, 1564, 1961
BsiHKCI	CYCGRG	3 cut(s)	1610, 1829, 1903
BsiSI	CCGG	7 cut(s)	256, 362, 937, 1007, 1639, 1689, 1809
BslFI	GGGAC	1 cut(s)	1267
BslI	CCNNNNNNNGG	5 cut(s)	159, 622, 742, 1467, 1656
BsmAI	GTCTC	1 cut(s)	358
BsmFI	GGGAC	1 cut(s)	1267
BsmI	GAATGC	2 cut(s)	511, 680
BsnI	GGCC	6 cut(s)	126, 731, 876, 1025, 1081, 1812
Bso31I	GGTCTC	1 cut(s)	358
BsoBI	CYCGRG	3 cut(s)	1610, 1829, 1903
Bsp119I	TTCGAA	2 cut(s)	580, 672
Bsp1286I	GDGCHC	6 cut(s)	93, 918, 926, 972, 1564, 1961
Bsp19I	CCATGG	1 cut(s)	1466
BspANI	GGCC	6 cut(s)	126, 731, 876, 1025, 1081, 1812
BspDI	ATCGAT	1 cut(s)	333
BspFNI	CGCG	1 cut(s)	1618
BspLI	GGNNCC	1 cut(s)	606
BspMAI	CTGCAG	2 cut(s)	1675, 1726
BspMI	ACCTGC	3 cut(s)	1721, 1729, 1761
BspOI	GCTAGC	1 cut(s)	561
BspPI	GGATC	6 cut(s)	408, 512, 659, 995, 1097, 1585
BspQI	GCTCTTC	1 cut(s)	70
BspT104I	TTCGAA	2 cut(s)	580, 672
BspTI	CTTAAG	1 cut(s)	223
BspTNI	GGTCTC	1 cut(s)	358
BsrBI	CCGCTC	3 cut(s)	123, 1139, 1626
BsrDI	GCAATG	2 cut(s)	451, 1698
BsrFI	RCCGGY	1 cut(s)	1688
BsrI	ACTGG	1 cut(s)	1579
BssAI	RCCGGY	1 cut(s)	1688
BssECI	CCNNGG	7 cut(s)	616, 714, 862, 1005, 1466, 1650, 1902
BssNI	GRCGYC	1 cut(s)	1695
BssSI	CACGAG	1 cut(s)	917
BssT1I	CCWWGG	2 cut(s)	714, 1466
Bst2BI	CACGAG	1 cut(s)	917
Bst2UI	CCWGG	3 cut(s)	292, 1651, 1848
Bst4CI	ACNGT	4 cut(s)	514, 855, 1242, 1403
Bst6I	CTCTTC	4 cut(s)	70, 813, 952, 1171
BstACI	GRCGYC	1 cut(s)	1695
BstAFI	CTTAAG	1 cut(s)	223
BstAPI	GCANNNNNTGC	1 cut(s)	684
BstBI	TTCGAA	2 cut(s)	580, 672
BstC8I	GCNNGC	8 cut(s)	559, 685, 733, 766, 957, 968, 1690, 1803
BstDEI	CTNAG	2 cut(s)	1083, 1424
BstDSI	CCRYGG	3 cut(s)	616, 862, 1466
BstF5I	GGATG	4 cut(s)	1156, 1396, 1651, 1864
BstFNI	CGCG	1 cut(s)	1618
BstH2I	RGCGCY	2 cut(s)	83, 1709
BstHHI	GCGC	4 cut(s)	82, 103, 1618, 1708
BstMAI	GTCTC	1 cut(s)	358
BstNI	CCWGG	3 cut(s)	292, 1651, 1848
BstNSI	RCATGY	2 cut(s)	217, 687
BstSCI	CCNGG	4 cut(s)	290, 1005, 1649, 1846
BstSFI	CTRYAG	3 cut(s)	1224, 1671, 1722
BstSLI	GKGCMC	4 cut(s)	93, 918, 972, 1564
BstUI	CGCG	1 cut(s)	1618
BstV2I	GAAGAC	4 cut(s)	254, 378, 1277, 1959
BstX2I	RGATCY	2 cut(s)	413, 475
BstYI	RGATCY	2 cut(s)	413, 475
Bsu15I	ATCGAT	1 cut(s)	333
BsuRI	GGCC	6 cut(s)	126, 731, 876, 1025, 1081, 1812
BsuTUI	ATCGAT	1 cut(s)	333
BtgI	CCRYGG	3 cut(s)	616, 862, 1466
BtgZI	GCGATG	1 cut(s)	129
BtrI	CACGTC	2 cut(s)	993, 1014
BtsCI	GGATG	4 cut(s)	1156, 1396, 1651, 1864
BtsI	GCAGTG	1 cut(s)	1372
BtsIMutI	CAGTG	2 cut(s)	1372, 1572
BveI	ACCTGC	3 cut(s)	1721, 1729, 1761
Cac8I	GCNNGC	8 cut(s)	559, 685, 733, 766, 957, 968, 1690, 1803
CaiI	CAGNNNCTG	1 cut(s)	1753
CfoI	GCGC	4 cut(s)	82, 103, 1618, 1708
Cfr10I	RCCGGY	1 cut(s)	1688
Cfr13I	GGNCC	3 cut(s)	729, 875, 1899
ClaI	ATCGAT	1 cut(s)	333
Csp6I	GTAC	3 cut(s)	217, 435, 1585
CspCI	CAANNNNNGTGG	2 cut(s)	1432, 1467
CviAII	CATG	8 cut(s)	94, 104, 214, 684, 1034, 1051, 1467, 1954
CviQI	GTAC	3 cut(s)	217, 435, 1585
DdeI	CTNAG	2 cut(s)	1083, 1424
DriI	GACNNNNNGTC	1 cut(s)	865
EaeI	YGGCCR	2 cut(s)	124, 1023
Eam1104I	CTCTTC	4 cut(s)	70, 813, 952, 1171
Eam1105I	GACNNNNNGTC	1 cut(s)	865
EarI	CTCTTC	4 cut(s)	70, 813, 952, 1171
EciI	GGCGGA	5 cut(s)	192, 1176, 1644, 1676, 1809
Eco130I	CCWWGG	2 cut(s)	714, 1466
Eco147I	AGGCCT	1 cut(s)	1081
Eco31I	GGTCTC	1 cut(s)	358
Eco32I	GATATC	1 cut(s)	1441
Eco47I	GGWCC	1 cut(s)	1899
Eco47III	AGCGCT	2 cut(s)	81, 1707
Eco57I	CTGAAG	1 cut(s)	537
Eco88I	CYCGRG	3 cut(s)	1610, 1829, 1903
EcoRI	GAATTC	1 cut(s)	576
EcoRII	CCWGG	3 cut(s)	290, 1649, 1846
EcoRV	GATATC	1 cut(s)	1441
EcoT14I	CCWWGG	2 cut(s)	714, 1466
EcoT22I	ATGCAT	1 cut(s)	215
ErhI	CCWWGG	2 cut(s)	714, 1466
FaeI	CATG	8 cut(s)	97, 107, 217, 687, 1037, 1054, 1470, 1957
FalI	AAGNNNNNCTT	8 cut(s)	269, 301, 401, 433, 740, 772, 1467, 1499
FaqI	GGGAC	1 cut(s)	1267
FatI	CATG	8 cut(s)	93, 103, 213, 683, 1033, 1050, 1466, 1953
FauI	CCCGC	6 cut(s)	156, 386, 773, 959, 1144, 1150
FauNDI	CATATG	1 cut(s)	929
FblI	GTMKAC	2 cut(s)	630, 1223
FokI	GGATG	4 cut(s)	1163, 1403, 1658, 1851
FspBI	CTAG	4 cut(s)	479, 558, 1214, 1565
GlaI	GCGC	4 cut(s)	81, 102, 1617, 1707
GsaI	CCCAGC	2 cut(s)	86, 156
HaeII	RGCGCY	2 cut(s)	83, 1709
HaeIII	GGCC	6 cut(s)	126, 731, 876, 1025, 1081, 1812
HapII	CCGG	7 cut(s)	256, 362, 937, 1007, 1639, 1689, 1809
HhaI	GCGC	4 cut(s)	82, 103, 1618, 1708
Hin1I	GRCGYC	1 cut(s)	1695
Hin1II	CATG	8 cut(s)	97, 107, 217, 687, 1037, 1054, 1470, 1957
Hin6I	GCGC	4 cut(s)	80, 101, 1616, 1706
HinP1I	GCGC	4 cut(s)	80, 101, 1616, 1706
HincII	GTYRAC	1 cut(s)	16
HindII	GTYRAC	1 cut(s)	16
HindIII	AAGCTT	1 cut(s)	1118
HinfI	GANTC	6 cut(s)	63, 108, 344, 542, 1683, 1950
HpaII	CCGG	7 cut(s)	256, 362, 937, 1007, 1639, 1689, 1809
HphI	GGTGA	1 cut(s)	351
Hpy166II	GTNNAC	8 cut(s)	16, 631, 851, 916, 1017, 1224, 1430, 1562
Hpy188I	TCNGA	9 cut(s)	9, 609, 1102, 1188, 1582, 1763, 1773, 1869, 1879
Hpy188III	TCNNGA	2 cut(s)	305, 1043
Hpy8I	GTNNAC	8 cut(s)	16, 631, 851, 916, 1017, 1224, 1430, 1562
HpyAV	CCTTC	5 cut(s)	204, 736, 904, 1142, 1636
HpyCH4III	ACNGT	4 cut(s)	514, 855, 1242, 1403
HpyCH4IV	ACGT	6 cut(s)	189, 437, 804, 992, 1013, 1695
HpyF3I	CTNAG	2 cut(s)	1083, 1424
HpySE526I	ACGT	6 cut(s)	189, 437, 804, 992, 1013, 1695
Hsp92I	GRCGYC	1 cut(s)	1695
Hsp92II	CATG	8 cut(s)	97, 107, 217, 687, 1037, 1054, 1470, 1957
HspAI	GCGC	4 cut(s)	80, 101, 1616, 1706
KroI	GCCGGC	1 cut(s)	1688
KroNI	GCCGGC	1 cut(s)	1690
LguI	GCTCTTC	1 cut(s)	70
LmnI	GCTCC	6 cut(s)	332, 610, 929, 1054, 1144, 1623
LweI	GCATC	3 cut(s)	325, 1636, 1873
MaeI	CTAG	4 cut(s)	479, 558, 1214, 1565
MaeII	ACGT	6 cut(s)	189, 437, 804, 992, 1013, 1695
MbiI	CCGCTC	3 cut(s)	123, 1139, 1626
MflI	RGATCY	2 cut(s)	413, 475
MhlI	GDGCHC	6 cut(s)	93, 918, 926, 972, 1564, 1961
MlsI	TGGCCA	1 cut(s)	1025
MluCI	AATT	7 cut(s)	259, 268, 445, 576, 595, 700, 1302
MluNI	TGGCCA	1 cut(s)	1025
MlyI	GAGTC	3 cut(s)	353, 1692, 1959
MmeI	TCCRAC	1 cut(s)	1786
Mox20I	TGGCCA	1 cut(s)	1025
Mph1103I	ATGCAT	1 cut(s)	215
MreI	CGCCGGCG	1 cut(s)	1688
MroNI	GCCGGC	1 cut(s)	1688
MroXI	GAANNNNTTC	2 cut(s)	62, 576
MscI	TGGCCA	1 cut(s)	1025
MseI	TTAA	5 cut(s)	224, 491, 699, 747, 1326
Msp20I	TGGCCA	1 cut(s)	1025
MspA1I	CMGCKG	5 cut(s)	341, 393, 1145, 1508, 1858
MspCI	CTTAAG	1 cut(s)	223
MspI	CCGG	7 cut(s)	256, 362, 937, 1007, 1639, 1689, 1809
MspR9I	CCNGG	4 cut(s)	292, 1007, 1651, 1848
Mva1269I	GAATGC	2 cut(s)	511, 680
MvaI	CCWGG	3 cut(s)	292, 1651, 1848
MvnI	CGCG	1 cut(s)	1618
NaeI	GCCGGC	1 cut(s)	1690
NciI	CCSGG	1 cut(s)	1007
NcoI	CCATGG	1 cut(s)	1466
NdeI	CATATG	1 cut(s)	929
NgoMIV	GCCGGC	1 cut(s)	1688
NheI	GCTAGC	1 cut(s)	557
NlaIII	CATG	8 cut(s)	97, 107, 217, 687, 1037, 1054, 1470, 1957
NlaIV	GGNNCC	1 cut(s)	606
NmeAIII	GCCGAG	1 cut(s)	1585
NsiI	ATGCAT	1 cut(s)	215
NspI	RCATGY	2 cut(s)	217, 687
NspV	TTCGAA	2 cut(s)	580, 672
PaeI	GCATGC	1 cut(s)	687
PceI	AGGCCT	1 cut(s)	1081
PciSI	GCTCTTC	1 cut(s)	70
PcsI	WCGNNNNNNNCGW	4 cut(s)	141, 777, 956, 1692
PctI	GAATGC	2 cut(s)	511, 680
PdiI	GCCGGC	1 cut(s)	1690
PdmI	GAANNNNTTC	2 cut(s)	62, 576
PfeI	GAWTC	3 cut(s)	63, 108, 542
PflMI	CCANNNNNTGG	1 cut(s)	159
PfoI	TCCNGGA	1 cut(s)	290
PleI	GAGTC	3 cut(s)	352, 1691, 1958
PpsI	GAGTC	3 cut(s)	352, 1691, 1958
Psp6I	CCWGG	3 cut(s)	290, 1649, 1846
PspFI	CCCAGC	2 cut(s)	82, 152
PspGI	CCWGG	3 cut(s)	290, 1649, 1846
PspN4I	GGNNCC	1 cut(s)	606
PspPI	GGNCC	3 cut(s)	729, 875, 1899
PstI	CTGCAG	2 cut(s)	1675, 1726
PstNI	CAGNNNCTG	1 cut(s)	1753
PsuI	RGATCY	2 cut(s)	413, 475
PvuII	CAGCTG	1 cut(s)	1508
RsaI	GTAC	3 cut(s)	218, 436, 1586
RsaNI	GTAC	3 cut(s)	217, 435, 1585
SapI	GCTCTTC	1 cut(s)	70
SaqAI	TTAA	5 cut(s)	224, 491, 699, 747, 1326
Sau96I	GGNCC	3 cut(s)	729, 875, 1899
ScaI	AGTACT	1 cut(s)	1586
SchI	GAGTC	3 cut(s)	353, 1692, 1959
ScrFI	CCNGG	4 cut(s)	292, 1007, 1651, 1848
SduI	GDGCHC	6 cut(s)	93, 918, 926, 972, 1564, 1961
SfaNI	GCATC	3 cut(s)	325, 1636, 1873
SfcI	CTRYAG	3 cut(s)	1224, 1671, 1722
SfuI	TTCGAA	2 cut(s)	580, 672
SgrAI	CRCCGGYG	1 cut(s)	1688
SinI	GGWCC	1 cut(s)	1899
SmlI	CTYRAG	4 cut(s)	223, 418, 844, 1115
SmoI	CTYRAG	4 cut(s)	223, 418, 844, 1115
SphI	GCATGC	1 cut(s)	687
Sse9I	AATT	7 cut(s)	259, 268, 445, 576, 595, 700, 1302
SseBI	AGGCCT	1 cut(s)	1081
SspMI	CTAG	4 cut(s)	479, 558, 1214, 1565
StuI	AGGCCT	1 cut(s)	1081
StyD4I	CCNGG	4 cut(s)	290, 1005, 1649, 1846
StyI	CCWWGG	2 cut(s)	714, 1466
TaaI	ACNGT	4 cut(s)	514, 855, 1242, 1403
TaiI	ACGT	6 cut(s)	192, 440, 807, 995, 1016, 1698
TasI	AATT	7 cut(s)	259, 268, 445, 576, 595, 700, 1302
TatI	WGTACW	1 cut(s)	1584
TauI	GCSGC	5 cut(s)	126, 1629, 1837, 1846, 1858
TfiI	GAWTC	3 cut(s)	63, 108, 542
Tru1I	TTAA	5 cut(s)	224, 491, 699, 747, 1326
Tru9I	TTAA	5 cut(s)	224, 491, 699, 747, 1326
TscAI	CASTG	2 cut(s)	1372, 1579
TspDTI	ATGAA	4 cut(s)	605, 1082, 1407, 1959
TspGWI	ACGGA	3 cut(s)	327, 1636, 1805
TspRI	CASTG	2 cut(s)	1372, 1579
Van91I	CCANNNNNTGG	1 cut(s)	159
Vha464I	CTTAAG	1 cut(s)	223
VneI	GTGCAC	2 cut(s)	914, 1560
VpaK11BI	GGWCC	1 cut(s)	1899
XapI	RAATTY	1 cut(s)	576
XceI	RCATGY	2 cut(s)	217, 687
XcmI	CCANNNNNNNNNTGG	1 cut(s)	869
XmiI	GTMKAC	2 cut(s)	630, 1223
XmnI	GAANNNNTTC	2 cut(s)	62, 576
XspI	CTAG	4 cut(s)	479, 558, 1214, 1565
ZraI	GACGTC	1 cut(s)	1696
ZrmI	AGTACT	1 cut(s)	1586
Zsp2I	ATGCAT	1 cut(s)	215

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.