ZINC FINGER protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G02040 |
| fragaria_vesca | FvH4_7g10970 |
| malus_domestica | MD02G1211300.v1.1 MD07G1113900.v1.1 |
| prunus_persica | Prupe.2G136600_v2.0.a1 Prupe.2G136600_v2.0.a1 |
| pyrus_communis | pycom07g09880 pycom1755g00040 |
| rosa_chinensis | RchiOBHm_Chr1g0348911 |
| rosa_laevigata | RLG00000028618 |
| rosa_multiflora | Rmu_sc0000156.1_g000017 |
| rosa_roxburghii | Rroxscaffold_4G00306530 |
| rosa_rugosa | Rorug01G0198400 |
| rosa_samantha | Rh1AG215800 Rh1BG182000 Rh1CG200200 Rh1DG211800 |
| rosa_wichuraiana | Rw1G018290 Rw1G018400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1287 |
| AarI | CACCTGC | 1 cut(s) | 1417 |
| Acc36I | ACCTGC | 2 cut(s) | 1123, 1417 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 703, 1208 |
| AccI | GTMKAC | 1 cut(s) | 15 |
| AciI | CCGC | 7 cut(s) | 171, 183, 443, 708, 782, 951, 1085 |
| AclWI | GGATC | 6 cut(s) | 134, 506, 519, 980, 1076, 1089 |
| AcsI | RAATTY | 3 cut(s) | 433, 1022, 1186 |
| AcuI | CTGAAG | 2 cut(s) | 531, 1115 |
| AcvI | CACGTG | 1 cut(s) | 605 |
| AfaI | GTAC | 1 cut(s) | 180 |
| AfeI | AGCGCT | 1 cut(s) | 81 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 703, 1208, 1404, 1419 |
| AgsI | TTSAA | 7 cut(s) | 293, 688, 834, 912, 1028, 1326, 1443 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 853 |
| AjiI | CACGTC | 1 cut(s) | 978 |
| AjnI | CCWGG | 1 cut(s) | 343 |
| AluBI | AGCT | 7 cut(s) | 30, 237, 422, 1099, 1170, 1375, 1460 |
| AluI | AGCT | 7 cut(s) | 30, 237, 422, 1099, 1170, 1375, 1460 |
| Alw26I | GTCTC | 1 cut(s) | 1344 |
| AlwI | GGATC | 6 cut(s) | 134, 506, 519, 980, 1076, 1089 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 350 |
| Aor51HI | AGCGCT | 1 cut(s) | 81 |
| ApeKI | GCWGC | 4 cut(s) | 237, 375, 749, 1042 |
| ApoI | RAATTY | 3 cut(s) | 433, 1022, 1186 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 284, 683, 1438 |
| AspLEI | GCGC | 1 cut(s) | 82 |
| AspS9I | GGNCC | 1 cut(s) | 469 |
| AsuC2I | CCSGG | 1 cut(s) | 242 |
| AsuHPI | GGTGA | 4 cut(s) | 622, 1229, 1372, 1407 |
| AsuII | TTCGAA | 1 cut(s) | 660 |
| AvaII | GGWCC | 1 cut(s) | 469 |
| BaeGI | GKGCMC | 3 cut(s) | 93, 103, 957 |
| BamHI | GGATCC | 2 cut(s) | 511, 1081 |
| BanII | GRGCYC | 1 cut(s) | 1412 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 798, 830 |
| BbrPI | CACGTG | 1 cut(s) | 605 |
| BbvI | GCAGC | 4 cut(s) | 224, 387, 736, 1054 |
| BccI | CCATC | 6 cut(s) | 356, 460, 803, 874, 927, 1242 |
| BciT130I | CCWGG | 1 cut(s) | 345 |
| BclI | TGATCA | 1 cut(s) | 760 |
| BcnI | CCSGG | 1 cut(s) | 242 |
| BcoDI | GTCTC | 1 cut(s) | 1344 |
| BfaI | CTAG | 3 cut(s) | 83, 720, 1007 |
| BfmI | CTRYAG | 1 cut(s) | 315 |
| BfoI | RGCGCY | 1 cut(s) | 83 |
| BfuAI | ACCTGC | 2 cut(s) | 1123, 1417 |
| BglII | AGATCT | 1 cut(s) | 410 |
| BisI | GCNGC | 5 cut(s) | 172, 238, 376, 750, 1043 |
| BlsI | GCNGC | 5 cut(s) | 173, 239, 377, 751, 1044 |
| Bme1390I | CCNGG | 2 cut(s) | 242, 345 |
| Bme18I | GGWCC | 1 cut(s) | 469 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 853 |
| BmgBI | CACGTC | 1 cut(s) | 978 |
| BmgT120I | GGNCC | 1 cut(s) | 469 |
| BmiI | GGNNCC | 3 cut(s) | 513, 1083, 1411 |
| BmrFI | CCNGG | 2 cut(s) | 242, 345 |
| BmrI | ACTGGG | 1 cut(s) | 1218 |
| BmsI | GCATC | 3 cut(s) | 310, 781, 1063 |
| BmuI | ACTGGG | 1 cut(s) | 1218 |
| Bpu14I | TTCGAA | 1 cut(s) | 660 |
| BpuMI | CCSGG | 1 cut(s) | 242 |
| BsaAI | YACGTR | 1 cut(s) | 605 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1107 |
| BsaJI | CCNNGG | 5 cut(s) | 504, 702, 850, 1202, 1418 |
| BsaWI | WCCGGW | 1 cut(s) | 1120 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 703, 1208, 1404, 1419 |
| Bse118I | RCCGGY | 1 cut(s) | 378 |
| Bse1I | ACTGG | 1 cut(s) | 1213 |
| Bse3DI | GCAATG | 2 cut(s) | 181, 445 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1107 |
| BseBI | CCWGG | 1 cut(s) | 345 |
| BseDI | CCNNGG | 5 cut(s) | 504, 702, 850, 1202, 1418 |
| BseGI | GGATG | 6 cut(s) | 121, 367, 392, 790, 1132, 1180 |
| BseJI | GATNNNNATC | 1 cut(s) | 1107 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 703, 1208, 1404, 1419 |
| BseMI | GCAATG | 2 cut(s) | 181, 445 |
| BseNI | ACTGG | 1 cut(s) | 1213 |
| BseRI | GAGGAG | 4 cut(s) | 371, 1152, 1235, 1402 |
| BseSI | GKGCMC | 3 cut(s) | 93, 103, 957 |
| BseXI | GCAGC | 4 cut(s) | 224, 387, 736, 1054 |
| BsiSI | CCGG | 3 cut(s) | 241, 379, 1121 |
| BslFI | GGGAC | 3 cut(s) | 313, 1140, 1225 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 703, 1208, 1404, 1419 |
| BsmAI | GTCTC | 1 cut(s) | 1344 |
| BsmFI | GGGAC | 3 cut(s) | 313, 1140, 1225 |
| Bsp119I | TTCGAA | 1 cut(s) | 660 |
| Bsp1286I | GDGCHC | 4 cut(s) | 93, 103, 957, 1412 |
| Bsp143I | GATC | 8 cut(s) | 139, 410, 511, 760, 972, 1081, 1090, 1102 |
| Bsp19I | CCATGG | 3 cut(s) | 850, 1202, 1418 |
| BspACI | CCGC | 7 cut(s) | 171, 183, 443, 708, 782, 951, 1085 |
| BspHI | TCATGA | 1 cut(s) | 588 |
| BspLI | GGNNCC | 3 cut(s) | 513, 1083, 1411 |
| BspMI | ACCTGC | 2 cut(s) | 1123, 1417 |
| BspPI | GGATC | 6 cut(s) | 134, 506, 519, 980, 1076, 1089 |
| BspT104I | TTCGAA | 1 cut(s) | 660 |
| BsrDI | GCAATG | 2 cut(s) | 181, 445 |
| BsrFI | RCCGGY | 1 cut(s) | 378 |
| BsrI | ACTGG | 1 cut(s) | 1213 |
| BssAI | RCCGGY | 1 cut(s) | 378 |
| BssECI | CCNNGG | 5 cut(s) | 504, 702, 850, 1202, 1418 |
| BssMI | GATC | 8 cut(s) | 139, 410, 511, 760, 972, 1081, 1090, 1102 |
| BssT1I | CCWWGG | 4 cut(s) | 702, 850, 1202, 1418 |
| Bst2UI | CCWGG | 1 cut(s) | 345 |
| Bst4CI | ACNGT | 3 cut(s) | 508, 1355, 1403 |
| Bst6I | CTCTTC | 5 cut(s) | 401, 459, 555, 801, 1141 |
| BstBAI | YACGTR | 1 cut(s) | 605 |
| BstBI | TTCGAA | 1 cut(s) | 660 |
| BstC8I | GCNNGC | 4 cut(s) | 380, 553, 673, 953 |
| BstDEI | CTNAG | 4 cut(s) | 209, 894, 1065, 1376 |
| BstDSI | CCRYGG | 4 cut(s) | 504, 850, 1202, 1418 |
| BstF5I | GGATG | 6 cut(s) | 121, 367, 392, 790, 1132, 1180 |
| BstH2I | RGCGCY | 1 cut(s) | 83 |
| BstHHI | GCGC | 1 cut(s) | 82 |
| BstKTI | GATC | 8 cut(s) | 142, 413, 514, 763, 975, 1084, 1093, 1105 |
| BstMAI | GTCTC | 1 cut(s) | 1344 |
| BstMBI | GATC | 8 cut(s) | 139, 410, 511, 760, 972, 1081, 1090, 1102 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 88, 234 |
| BstNI | CCWGG | 1 cut(s) | 345 |
| BstNSI | RCATGY | 2 cut(s) | 202, 675 |
| BstSCI | CCNGG | 2 cut(s) | 240, 343 |
| BstSFI | CTRYAG | 1 cut(s) | 315 |
| BstSLI | GKGCMC | 3 cut(s) | 93, 103, 957 |
| BstV1I | GCAGC | 4 cut(s) | 224, 387, 736, 1054 |
| BstX2I | RGATCY | 3 cut(s) | 410, 511, 1081 |
| BstYI | RGATCY | 3 cut(s) | 410, 511, 1081 |
| BtgI | CCRYGG | 4 cut(s) | 504, 850, 1202, 1418 |
| BtrI | CACGTC | 1 cut(s) | 978 |
| BtsCI | GGATG | 6 cut(s) | 121, 367, 392, 790, 1132, 1180 |
| BtsIMutI | CAGTG | 2 cut(s) | 1314, 1408 |
| BveI | ACCTGC | 2 cut(s) | 1123, 1417 |
| Cac8I | GCNNGC | 4 cut(s) | 380, 553, 673, 953 |
| CaiI | CAGNNNCTG | 1 cut(s) | 350 |
| CciI | TCATGA | 1 cut(s) | 588 |
| CfoI | GCGC | 1 cut(s) | 82 |
| Cfr10I | RCCGGY | 1 cut(s) | 378 |
| Cfr13I | GGNCC | 1 cut(s) | 469 |
| CseI | GACGC | 1 cut(s) | 1142 |
| Csp6I | GTAC | 1 cut(s) | 179 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1152, 1187 |
| CviQI | GTAC | 1 cut(s) | 179 |
| DdeI | CTNAG | 4 cut(s) | 209, 894, 1065, 1376 |
| DpnI | GATC | 8 cut(s) | 141, 412, 513, 762, 974, 1083, 1092, 1104 |
| DpnII | GATC | 8 cut(s) | 139, 410, 511, 760, 972, 1081, 1090, 1102 |
| DraI | TTTAAA | 1 cut(s) | 34 |
| DriI | GACNNNNNGTC | 1 cut(s) | 853 |
| Eam1104I | CTCTTC | 5 cut(s) | 401, 459, 555, 801, 1141 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 853 |
| EarI | CTCTTC | 5 cut(s) | 401, 459, 555, 801, 1141 |
| EciI | GGCGGA | 1 cut(s) | 797 |
| Eco130I | CCWWGG | 4 cut(s) | 702, 850, 1202, 1418 |
| Eco24I | GRGCYC | 1 cut(s) | 1412 |
| Eco47I | GGWCC | 1 cut(s) | 469 |
| Eco47III | AGCGCT | 1 cut(s) | 81 |
| Eco57I | CTGAAG | 2 cut(s) | 531, 1115 |
| Eco72I | CACGTG | 1 cut(s) | 605 |
| EcoO109I | RGGNCCY | 1 cut(s) | 469 |
| EcoRII | CCWGG | 1 cut(s) | 343 |
| EcoT14I | CCWWGG | 4 cut(s) | 702, 850, 1202, 1418 |
| EcoT38I | GRGCYC | 1 cut(s) | 1412 |
| ErhI | CCWWGG | 4 cut(s) | 702, 850, 1202, 1418 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 456, 488 |
| FaqI | GGGAC | 3 cut(s) | 313, 1140, 1225 |
| FauI | CCCGC | 2 cut(s) | 190, 944 |
| FbaI | TGATCA | 1 cut(s) | 760 |
| FblI | GTMKAC | 1 cut(s) | 15 |
| Fnu4HI | GCNGC | 5 cut(s) | 172, 238, 376, 750, 1043 |
| FokI | GGATG | 6 cut(s) | 128, 374, 399, 797, 1139, 1187 |
| FriOI | GRGCYC | 1 cut(s) | 1412 |
| Fsp4HI | GCNGC | 5 cut(s) | 172, 238, 376, 750, 1043 |
| FspBI | CTAG | 3 cut(s) | 83, 720, 1007 |
| GlaI | GCGC | 1 cut(s) | 81 |
| GluI | GCNGC | 5 cut(s) | 172, 238, 376, 750, 1043 |
| HaeII | RGCGCY | 1 cut(s) | 83 |
| HapII | CCGG | 3 cut(s) | 241, 379, 1121 |
| HgaI | GACGC | 1 cut(s) | 1142 |
| HhaI | GCGC | 1 cut(s) | 82 |
| Hin6I | GCGC | 1 cut(s) | 80 |
| HinP1I | GCGC | 1 cut(s) | 80 |
| HincII | GTYRAC | 1 cut(s) | 16 |
| HindII | GTYRAC | 1 cut(s) | 16 |
| HindIII | AAGCTT | 2 cut(s) | 28, 1168 |
| HinfI | GANTC | 2 cut(s) | 326, 536 |
| HpaII | CCGG | 3 cut(s) | 241, 379, 1121 |
| HphI | GGTGA | 4 cut(s) | 622, 1229, 1372, 1407 |
| Hpy166II | GTNNAC | 2 cut(s) | 16, 1382 |
| Hpy188I | TCNGA | 6 cut(s) | 147, 352, 419, 924, 1081, 1095 |
| Hpy188III | TCNNGA | 4 cut(s) | 589, 758, 936, 1028 |
| Hpy8I | GTNNAC | 2 cut(s) | 16, 1382 |
| Hpy99I | CGWCG | 3 cut(s) | 134, 137, 140 |
| HpyAV | CCTTC | 3 cut(s) | 113, 295, 1340 |
| HpyCH4III | ACNGT | 3 cut(s) | 508, 1355, 1403 |
| HpyCH4IV | ACGT | 2 cut(s) | 604, 977 |
| HpyCH4V | TGCA | 6 cut(s) | 54, 198, 675, 901, 1330, 1426 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 88, 234 |
| HpyF3I | CTNAG | 4 cut(s) | 209, 894, 1065, 1376 |
| HpySE526I | ACGT | 2 cut(s) | 604, 977 |
| HspAI | GCGC | 1 cut(s) | 80 |
| KroI | GCCGGC | 1 cut(s) | 378 |
| KroNI | GCCGGC | 1 cut(s) | 380 |
| Ksp22I | TGATCA | 1 cut(s) | 760 |
| Kzo9I | GATC | 8 cut(s) | 139, 410, 511, 760, 972, 1081, 1090, 1102 |
| LmnI | GCTCC | 4 cut(s) | 1039, 1123, 1415, 1457 |
| Lsp1109I | GCAGC | 4 cut(s) | 224, 387, 736, 1054 |
| LweI | GCATC | 3 cut(s) | 310, 781, 1063 |
| MaeI | CTAG | 3 cut(s) | 83, 720, 1007 |
| MaeII | ACGT | 2 cut(s) | 604, 977 |
| MaeIII | GTNAC | 3 cut(s) | 122, 610, 722 |
| MalI | GATC | 8 cut(s) | 141, 412, 513, 762, 974, 1083, 1092, 1104 |
| MboI | GATC | 8 cut(s) | 139, 410, 511, 760, 972, 1081, 1090, 1102 |
| MboII | GAAGA | 8 cut(s) | 418, 476, 545, 572, 582, 782, 818, 1158 |
| MfeI | CAATTG | 1 cut(s) | 478 |
| MflI | RGATCY | 3 cut(s) | 410, 511, 1081 |
| MhlI | GDGCHC | 4 cut(s) | 93, 103, 957, 1412 |
| MlyI | GAGTC | 1 cut(s) | 335 |
| MmeI | TCCRAC | 2 cut(s) | 1005, 1435 |
| MroNI | GCCGGC | 1 cut(s) | 378 |
| MroXI | GAANNNNTTC | 3 cut(s) | 284, 683, 1438 |
| MseI | TTAA | 6 cut(s) | 33, 485, 618, 735, 1107, 1272 |
| MspI | CCGG | 3 cut(s) | 241, 379, 1121 |
| MspR9I | CCNGG | 2 cut(s) | 242, 345 |
| MunI | CAATTG | 1 cut(s) | 478 |
| MvaI | CCWGG | 1 cut(s) | 345 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 88, 234 |
| NaeI | GCCGGC | 1 cut(s) | 380 |
| NciI | CCSGG | 1 cut(s) | 242 |
| NcoI | CCATGG | 3 cut(s) | 850, 1202, 1418 |
| NdeII | GATC | 8 cut(s) | 139, 410, 511, 760, 972, 1081, 1090, 1102 |
| NgoMIV | GCCGGC | 1 cut(s) | 378 |
| NlaIV | GGNNCC | 3 cut(s) | 513, 1083, 1411 |
| NmeAIII | GCCGAG | 2 cut(s) | 147, 349 |
| NmuCI | GTSAC | 3 cut(s) | 122, 610, 722 |
| NspI | RCATGY | 2 cut(s) | 202, 675 |
| NspV | TTCGAA | 1 cut(s) | 660 |
| PaeI | GCATGC | 1 cut(s) | 675 |
| PagI | TCATGA | 1 cut(s) | 588 |
| PaqCI | CACCTGC | 1 cut(s) | 1417 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 135 |
| PdiI | GCCGGC | 1 cut(s) | 380 |
| PdmI | GAANNNNTTC | 3 cut(s) | 284, 683, 1438 |
| PfeI | GAWTC | 1 cut(s) | 536 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 703, 1208 |
| PkrI | GCNGC | 5 cut(s) | 173, 239, 377, 751, 1044 |
| PleI | GAGTC | 1 cut(s) | 334 |
| PmaCI | CACGTG | 1 cut(s) | 605 |
| PmlI | CACGTG | 1 cut(s) | 605 |
| PpsI | GAGTC | 1 cut(s) | 334 |
| Ppu21I | YACGTR | 1 cut(s) | 605 |
| PpuMI | RGGWCCY | 1 cut(s) | 469 |
| PsiI | TTATAA | 1 cut(s) | 1287 |
| Psp5II | RGGWCCY | 1 cut(s) | 469 |
| Psp6I | CCWGG | 1 cut(s) | 343 |
| PspCI | CACGTG | 1 cut(s) | 605 |
| PspGI | CCWGG | 1 cut(s) | 343 |
| PspN4I | GGNNCC | 3 cut(s) | 513, 1083, 1411 |
| PspPI | GGNCC | 1 cut(s) | 469 |
| PspPPI | RGGWCCY | 1 cut(s) | 469 |
| PstNI | CAGNNNCTG | 1 cut(s) | 350 |
| PsuI | RGATCY | 3 cut(s) | 410, 511, 1081 |
| RsaI | GTAC | 1 cut(s) | 180 |
| RsaNI | GTAC | 1 cut(s) | 179 |
| SalI | GTCGAC | 1 cut(s) | 14 |
| SaqAI | TTAA | 6 cut(s) | 33, 485, 618, 735, 1107, 1272 |
| SatI | GCNGC | 5 cut(s) | 172, 238, 376, 750, 1043 |
| Sau3AI | GATC | 8 cut(s) | 139, 410, 511, 760, 972, 1081, 1090, 1102 |
| Sau96I | GGNCC | 1 cut(s) | 469 |
| SchI | GAGTC | 1 cut(s) | 335 |
| ScrFI | CCNGG | 2 cut(s) | 242, 345 |
| SduI | GDGCHC | 4 cut(s) | 93, 103, 957, 1412 |
| SfaNI | GCATC | 3 cut(s) | 310, 781, 1063 |
| SfcI | CTRYAG | 1 cut(s) | 315 |
| SfuI | TTCGAA | 1 cut(s) | 660 |
| SinI | GGWCC | 1 cut(s) | 469 |
| SphI | GCATGC | 1 cut(s) | 675 |
| SsiI | CCGC | 7 cut(s) | 171, 183, 443, 708, 782, 951, 1085 |
| SspMI | CTAG | 3 cut(s) | 83, 720, 1007 |
| StyD4I | CCNGG | 2 cut(s) | 240, 343 |
| StyI | CCWWGG | 4 cut(s) | 702, 850, 1202, 1418 |
| TaaI | ACNGT | 3 cut(s) | 508, 1355, 1403 |
| TaiI | ACGT | 2 cut(s) | 607, 980 |
| TaqI | TCGA | 7 cut(s) | 15, 129, 660, 768, 857, 1101, 1257 |
| TauI | GCSGC | 1 cut(s) | 174 |
| TfiI | GAWTC | 1 cut(s) | 536 |
| Tru1I | TTAA | 6 cut(s) | 33, 485, 618, 735, 1107, 1272 |
| Tru9I | TTAA | 6 cut(s) | 33, 485, 618, 735, 1107, 1272 |
| TscAI | CASTG | 2 cut(s) | 1321, 1408 |
| TseFI | GTSAC | 3 cut(s) | 122, 610, 722 |
| TseI | GCWGC | 4 cut(s) | 237, 375, 749, 1042 |
| Tsp45I | GTSAC | 3 cut(s) | 122, 610, 722 |
| TspDTI | ATGAA | 7 cut(s) | 132, 596, 819, 918, 1035, 1067, 1359 |
| TspRI | CASTG | 2 cut(s) | 1321, 1408 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 703, 1208 |
| VpaK11BI | GGWCC | 1 cut(s) | 469 |
| XapI | RAATTY | 3 cut(s) | 433, 1022, 1186 |
| XceI | RCATGY | 2 cut(s) | 202, 675 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 505 |
| XmiI | GTMKAC | 1 cut(s) | 15 |
| XmnI | GAANNNNTTC | 3 cut(s) | 284, 683, 1438 |
| XspI | CTAG | 3 cut(s) | 83, 720, 1007 |