Prupe.2G174500_v2.0.a1

glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
22047256 .. 22050244
2989 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G174500.1

Sequence Viewer

Length: 1539 bp
ATGATCAACCAAACCCAAAAACACACACAACCTCTCTTCACCATGAAAGGCAATCAAAAAGACCCTGCAGAAGGATGGACCTCCAAAAAGATCACCTTATGTTTCTTGGCTTTGATCTCTTTCCTCTACATCTCCTACTCTCTACAATTTGTTTCGCCTTCCAATCTTTGTAGGCAGCAGCAATCTTTCACTGCCCATGTCCAATCACAACCAAAACCAAAGGTTTCCTTGCCTCCAATTCCTCAGCCAATTACAGATACAACCCCAGAAAAACCCCAAGAGGCTAAAACAAACATATCCCATATAGTCTTTGGCATTGCAGCCTCAGCCAATATGTGGGGCCATAGGAAGAACTACATCAAGCTATGGTGGAAGGCAGACCAAATGAGGGGCAATGTTTGGTTGGATCAGCCTGTAAAAATGGAGCCTGAGCATGATCACCTTTTGCCACCTATAAAGATTTCCAGTGATACTTCCAAGTTTGAGTACAAGCACCCGAGAGGCCATCAGTCTGCGATACGCTTGTCACGCATAGTTTCGGAGAATTTCAGGCTAGGCATGGAGAATGTGAGGTGGTTTGTGATGGGGGATGATGACACAGTTTTTGTGACTGAGAATCTGGTCAGGGTTTTGCAGAAATATGACCATAACCAGTTTTATTATATTGGGAGCTCATCAGAGAGTCACTTGCAGAACATTTATTTTTCATACAACATGGCCTATGGTGGAGGAGGGATTGCTATAAGTTACCCATTAGCCAAAGCATTAGAGAAGATGCAGGATAGGTGCATAGAAAGATACACTGGATTGTACGGCTCAGATGATAGGCTTCAGGCTTGTATGGCTGAGCTTGGTGTCCCTCTCACCAGAGAAAAAGGATTTCACCAGTTTGATGTATATGGGAGCTTGTTTGGACTTCTAGCAGCTCATCCAGTCACACCCCTAGTGTCCCTCCACCACCTAGATGTGTTTGAGCCCATATTCCCCAACATGGACCGGGTCCATGCCCTACAAAGGCTCCAGGCCCCGATGAAGATCGACTCCGCCGGGCTTCTACAACAATCCATTTGTTACGACAAGACCCGATCCTGGACCGTATCTGTTTCATGGGGATACACGATTCAAATATTTCGAGGCATTTTTTCGCCCCGAGAAATTGAAATGCCATCTAGGACGTTCCTCAATTGGTACAAGAAAGCTGACTATACGACCTACGAATTCAACACGCACCGTTTTGGTAGGAACCCGTGTCAACAACCATTTGTGTATTACTTTTCTAATGTCGTATACAATAAAAATGTGAGCCATACAGCTACTGAGTATGTTCGCGATCGAGTGCCAGACCCAGAATGCCACTGGAAGATGGCAAATCCCTCCCGGATTAAAAAAGTGCAAGTCTATAAAGCACCCAATCCACATTTATGGGACAAGTCTCCAAGGAGAAATTGCTGCAGAATTTTGCCAAATACCAAGAAGAACGGCACCATGGTCATTGATGTAGGAGCATGCAATGAAGATGAAGTCGTCGAAGTGCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

513

Amino Acids

59.19

Weight (kDa)

9.11

Isoelectric Point (pI)

45.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011701)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1481
AccB7I CCANNNNNTGG 1 cut(s) 336
AccI GTMKAC 1 cut(s) 1287
AccII CGCG 1 cut(s) 1329
AciI CCGC 2 cut(s) 1044, 1534
AclWI GGATC 2 cut(s) 414, 1080
AcsI RAATTY 3 cut(s) 544, 1217, 1455
AcuI CTGAAG 1 cut(s) 815
AfaI GTAC 3 cut(s) 488, 812, 1190
AfiI CCNNNNNNNGG 6 cut(s) 71, 336, 388, 991, 1014, 1089
AgsI TTSAA 3 cut(s) 1124, 1160, 1222
AjnI CCWGG 2 cut(s) 1020, 1088
AluBI AGCT 7 cut(s) 364, 672, 850, 906, 926, 1199, 1313
AluI AGCT 7 cut(s) 364, 672, 850, 906, 926, 1199, 1313
Alw21I GWGCWC 1 cut(s) 674
Alw26I GTCTC 1 cut(s) 1437
AlwI GGATC 2 cut(s) 414, 1080
AlwNI CAGNNNCTG 1 cut(s) 1316
Ama87I CYCGRG 2 cut(s) 496, 1149
AoxI GGCC 4 cut(s) 340, 502, 717, 1023
ApeKI GCWGC 5 cut(s) 175, 178, 320, 923, 1449
ApoI RAATTY 3 cut(s) 544, 1217, 1455
ArsI GACNNNNNNTTYG 2 cut(s) 587, 619
AspS9I GGNCC 6 cut(s) 78, 340, 994, 1000, 1024, 1092
AsuC2I CCSGG 3 cut(s) 998, 1048, 1378
AsuHPI GGTGA 5 cut(s) 31, 85, 431, 856, 875
AvaI CYCGRG 2 cut(s) 496, 1149
AvaII GGWCC 4 cut(s) 78, 994, 1000, 1092
BaeI ACNNNNGTAYC 2 cut(s) 509, 542
BanI GGYRCC 1 cut(s) 1481
BanII GRGCYC 2 cut(s) 674, 978
Bbv12I GWGCWC 1 cut(s) 674
BbvCI CCTCAGC 2 cut(s) 243, 325
BbvI GCAGC 5 cut(s) 187, 190, 332, 935, 1436
BccI CCATC 5 cut(s) 69, 513, 577, 1174, 1357
BceAI ACGGC 2 cut(s) 829, 1495
BciT130I CCWGG 2 cut(s) 1022, 1090
BciVI GTATCC 1 cut(s) 1106
BclI TGATCA 2 cut(s) 3, 436
BcnI CCSGG 3 cut(s) 998, 1048, 1378
BcoDI GTCTC 1 cut(s) 1437
BfaI CTAG 5 cut(s) 554, 920, 944, 962, 1170
BfmI CTRYAG 2 cut(s) 66, 1450
BfuI GTATCC 1 cut(s) 1106
BisI GCNGC 5 cut(s) 176, 179, 321, 924, 1450
BlpI GCTNAGC 1 cut(s) 846
BlsI GCNGC 5 cut(s) 177, 180, 322, 925, 1451
Bme1390I CCNGG 5 cut(s) 998, 1022, 1048, 1090, 1378
Bme18I GGWCC 4 cut(s) 78, 994, 1000, 1092
BmeT110I CYCGRG 2 cut(s) 496, 1149
BmgT120I GGNCC 6 cut(s) 78, 340, 994, 1000, 1024, 1092
BmiI GGNNCC 7 cut(s) 341, 426, 1001, 1019, 1026, 1244, 1483
BmrFI CCNGG 5 cut(s) 998, 1022, 1048, 1090, 1378
BmsI GCATC 1 cut(s) 765
BpmI CTGGAG 1 cut(s) 1004
Bpu10I CCTNAGC 3 cut(s) 243, 325, 429
Bpu1102I GCTNAGC 1 cut(s) 846
BpuMI CCSGG 3 cut(s) 998, 1048, 1378
BsaBI GATNNNNATC 1 cut(s) 1034
BsaJI CCNNGG 2 cut(s) 1436, 1485
BsaXI ACNNNNNCTCC 2 cut(s) 1002, 1032
Bsc4I CCNNNNNNNGG 6 cut(s) 71, 336, 388, 991, 1014, 1089
Bse1I ACTGG 6 cut(s) 465, 652, 808, 886, 932, 1361
Bse3DI GCAATG 3 cut(s) 315, 400, 1516
Bse8I GATNNNNATC 1 cut(s) 1034
BseBI CCWGG 2 cut(s) 1022, 1090
BseDI CCNNGG 2 cut(s) 1436, 1485
BseGI GGATG 3 cut(s) 80, 595, 928
BseJI GATNNNNATC 1 cut(s) 1034
BseLI CCNNNNNNNGG 6 cut(s) 71, 336, 388, 991, 1014, 1089
BseMI GCAATG 3 cut(s) 315, 400, 1516
BseMII CTCAG 7 cut(s) 257, 339, 420, 603, 831, 837, 1308
BseNI ACTGG 6 cut(s) 465, 652, 808, 886, 932, 1361
BseRI GAGGAG 1 cut(s) 744
BseXI GCAGC 5 cut(s) 187, 190, 332, 935, 1436
Bsh1236I CGCG 1 cut(s) 1329
Bsh1285I CGRYCG 1 cut(s) 1333
BshFI GGCC 4 cut(s) 342, 504, 719, 1025
BshNI GGYRCC 1 cut(s) 1481
BsiEI CGRYCG 1 cut(s) 1333
BsiHKAI GWGCWC 1 cut(s) 674
BsiHKCI CYCGRG 2 cut(s) 496, 1149
BsiSI CCGG 3 cut(s) 997, 1047, 1378
BslFI GGGAC 3 cut(s) 842, 934, 1439
BslI CCNNNNNNNGG 6 cut(s) 71, 336, 388, 991, 1014, 1089
BsmAI GTCTC 1 cut(s) 1437
BsmFI GGGAC 3 cut(s) 842, 934, 1439
BsmI GAATGC 1 cut(s) 1355
BsnI GGCC 4 cut(s) 342, 504, 719, 1025
BsoBI CYCGRG 2 cut(s) 496, 1149
Bsp1286I GDGCHC 2 cut(s) 674, 978
Bsp143I GATC 8 cut(s) 3, 90, 114, 406, 436, 1035, 1085, 1330
Bsp1720I GCTNAGC 1 cut(s) 846
Bsp19I CCATGG 1 cut(s) 1485
Bsp68I TCGCGA 1 cut(s) 1329
BspACI CCGC 2 cut(s) 1044, 1534
BspANI GGCC 4 cut(s) 342, 504, 719, 1025
BspCNI CTCAG 7 cut(s) 256, 338, 421, 604, 830, 838, 1309
BspFNI CGCG 1 cut(s) 1329
BspLI GGNNCC 7 cut(s) 341, 426, 1001, 1019, 1026, 1244, 1483
BspMAI CTGCAG 2 cut(s) 70, 1454
BspPI GGATC 2 cut(s) 414, 1080
BspT107I GGYRCC 1 cut(s) 1481
BsrDI GCAATG 3 cut(s) 315, 400, 1516
BsrI ACTGG 6 cut(s) 465, 652, 808, 886, 932, 1361
BssECI CCNNGG 2 cut(s) 1436, 1485
BssMI GATC 8 cut(s) 3, 90, 114, 406, 436, 1035, 1085, 1330
BssNAI GTATAC 1 cut(s) 1288
BssT1I CCWWGG 2 cut(s) 1436, 1485
Bst1107I GTATAC 1 cut(s) 1288
Bst2UI CCWGG 2 cut(s) 1022, 1090
Bst4CI ACNGT 3 cut(s) 601, 1096, 1232
Bst6I CTCTTC 1 cut(s) 41
BstC8I GCNNGC 1 cut(s) 1507
BstDEI CTNAG 7 cut(s) 243, 325, 429, 612, 817, 846, 1317
BstDSI CCRYGG 1 cut(s) 1485
BstENI CCTNNNNNAGG 1 cut(s) 69
BstF5I GGATG 3 cut(s) 80, 595, 928
BstFNI CGCG 1 cut(s) 1329
BstKTI GATC 8 cut(s) 6, 93, 117, 409, 439, 1038, 1088, 1333
BstMAI GTCTC 1 cut(s) 1437
BstMBI GATC 8 cut(s) 3, 90, 114, 406, 436, 1035, 1085, 1330
BstMCI CGRYCG 1 cut(s) 1333
BstMWI GCNNNNNNNGC 3 cut(s) 326, 528, 842
BstNI CCWGG 2 cut(s) 1022, 1090
BstNSI RCATGY 1 cut(s) 1509
BstSCI CCNGG 5 cut(s) 996, 1020, 1046, 1088, 1376
BstSFI CTRYAG 2 cut(s) 66, 1450
BstUI CGCG 1 cut(s) 1329
BstV1I GCAGC 5 cut(s) 187, 190, 332, 935, 1436
BstXI CCANNNNNNTGG 1 cut(s) 1422
BstZ17I GTATAC 1 cut(s) 1288
BsuI GTATCC 1 cut(s) 1106
BsuRI GGCC 4 cut(s) 342, 504, 719, 1025
BtgI CCRYGG 1 cut(s) 1485
BtsCI GGATG 3 cut(s) 80, 595, 928
BtsI GCAGTG 1 cut(s) 189
BtsIMutI CAGTG 4 cut(s) 189, 472, 801, 1354
BtuMI TCGCGA 1 cut(s) 1329
Cac8I GCNNGC 1 cut(s) 1507
CaiI CAGNNNCTG 1 cut(s) 1316
Cfr13I GGNCC 6 cut(s) 78, 340, 994, 1000, 1024, 1092
Csp6I GTAC 3 cut(s) 487, 811, 1189
CviQI GTAC 3 cut(s) 487, 811, 1189
DdeI CTNAG 7 cut(s) 243, 325, 429, 612, 817, 846, 1317
DpnI GATC 8 cut(s) 5, 92, 116, 408, 438, 1037, 1087, 1332
DpnII GATC 8 cut(s) 3, 90, 114, 406, 436, 1035, 1085, 1330
Eam1104I CTCTTC 1 cut(s) 41
EarI CTCTTC 1 cut(s) 41
EciI GGCGGA 1 cut(s) 1033
Ecl136II GAGCTC 1 cut(s) 672
Eco130I CCWWGG 2 cut(s) 1436, 1485
Eco24I GRGCYC 2 cut(s) 674, 978
Eco47I GGWCC 4 cut(s) 78, 994, 1000, 1092
Eco53kI GAGCTC 1 cut(s) 672
Eco57I CTGAAG 1 cut(s) 815
Eco88I CYCGRG 2 cut(s) 496, 1149
EcoICRI GAGCTC 1 cut(s) 672
EcoNI CCTNNNNNAGG 1 cut(s) 69
EcoO109I RGGNCCY 1 cut(s) 1024
EcoRI GAATTC 1 cut(s) 1217
EcoRII CCWGG 2 cut(s) 1020, 1088
EcoT14I CCWWGG 2 cut(s) 1436, 1485
EcoT38I GRGCYC 2 cut(s) 674, 978
ErhI CCWWGG 2 cut(s) 1436, 1485
FalI AAGNNNNNCTT 4 cut(s) 80, 112, 212, 244
FaqI GGGAC 3 cut(s) 842, 934, 1439
FbaI TGATCA 2 cut(s) 3, 436
FblI GTMKAC 1 cut(s) 1287
Fnu4HI GCNGC 5 cut(s) 176, 179, 321, 924, 1450
FokI GGATG 3 cut(s) 87, 602, 915
FriOI GRGCYC 2 cut(s) 674, 978
Fsp4HI GCNGC 5 cut(s) 176, 179, 321, 924, 1450
FspBI CTAG 5 cut(s) 554, 920, 944, 962, 1170
GluI GCNGC 5 cut(s) 176, 179, 321, 924, 1450
GsuI CTGGAG 1 cut(s) 1004
HaeIII GGCC 4 cut(s) 342, 504, 719, 1025
HapII CCGG 3 cut(s) 997, 1047, 1378
HincII GTYRAC 1 cut(s) 1253
HindII GTYRAC 1 cut(s) 1253
HinfI GANTC 4 cut(s) 616, 682, 1040, 1120
HpaII CCGG 3 cut(s) 997, 1047, 1378
HphI GGTGA 5 cut(s) 31, 85, 431, 856, 875
Hpy166II GTNNAC 2 cut(s) 1253, 1288
Hpy188I TCNGA 3 cut(s) 541, 679, 820
Hpy188III TCNNGA 1 cut(s) 1328
Hpy8I GTNNAC 2 cut(s) 1253, 1288
Hpy99I CGWCG 1 cut(s) 1529
HpyAV CCTTC 3 cut(s) 65, 168, 367
HpyCH4III ACNGT 3 cut(s) 601, 1096, 1232
HpyCH4IV ACGT 1 cut(s) 1175
HpyCH4V TGCA 9 cut(s) 68, 320, 634, 691, 778, 789, 1393, 1452, 1509
HpyF10VI GCNNNNNNNGC 3 cut(s) 326, 528, 842
HpyF3I CTNAG 7 cut(s) 243, 325, 429, 612, 817, 846, 1317
HpySE526I ACGT 1 cut(s) 1175
Ksp22I TGATCA 2 cut(s) 3, 436
Kzo9I GATC 8 cut(s) 3, 90, 114, 406, 436, 1035, 1085, 1330
LmnI GCTCC 5 cut(s) 424, 669, 903, 1023, 1502
Lsp1109I GCAGC 5 cut(s) 187, 190, 332, 935, 1436
LweI GCATC 1 cut(s) 765
MaeI CTAG 5 cut(s) 554, 920, 944, 962, 1170
MaeII ACGT 1 cut(s) 1175
MaeIII GTNAC 6 cut(s) 525, 607, 683, 746, 934, 1070
MalI GATC 8 cut(s) 5, 92, 116, 408, 438, 1037, 1087, 1332
MboI GATC 8 cut(s) 3, 90, 114, 406, 436, 1035, 1085, 1330
MboII GAAGA 7 cut(s) 28, 361, 784, 1045, 1372, 1486, 1526
MfeI CAATTG 1 cut(s) 1183
MhlI GDGCHC 2 cut(s) 674, 978
MluCI AATT 9 cut(s) 146, 237, 249, 544, 1155, 1183, 1217, 1444, 1455
MlyI GAGTC 2 cut(s) 691, 1034
MmeI TCCRAC 1 cut(s) 384
MseI TTAA 1 cut(s) 1383
MslI CAYNNNNRTG 2 cut(s) 963, 1420
MspI CCGG 3 cut(s) 997, 1047, 1378
MspR9I CCNGG 5 cut(s) 998, 1022, 1048, 1090, 1378
MunI CAATTG 1 cut(s) 1183
Mva1269I GAATGC 1 cut(s) 1355
MvaI CCWGG 2 cut(s) 1022, 1090
MvnI CGCG 1 cut(s) 1329
MwoI GCNNNNNNNGC 3 cut(s) 326, 528, 842
NciI CCSGG 3 cut(s) 998, 1048, 1378
NcoI CCATGG 1 cut(s) 1485
NdeII GATC 8 cut(s) 3, 90, 114, 406, 436, 1035, 1085, 1330
NlaIV GGNNCC 7 cut(s) 341, 426, 1001, 1019, 1026, 1244, 1483
NmuCI GTSAC 4 cut(s) 525, 607, 683, 934
NruI TCGCGA 1 cut(s) 1329
NspI RCATGY 1 cut(s) 1509
PaeI GCATGC 1 cut(s) 1509
PctI GAATGC 1 cut(s) 1355
PfeI GAWTC 2 cut(s) 616, 1120
PflFI GACNNNGTC 1 cut(s) 998
PflMI CCANNNNNTGG 1 cut(s) 336
PfoI TCCNGGA 2 cut(s) 1088, 1376
PkrI GCNGC 5 cut(s) 177, 180, 322, 925, 1451
Ple19I CGATCG 1 cut(s) 1333
PleI GAGTC 2 cut(s) 690, 1034
PpsI GAGTC 2 cut(s) 690, 1034
Psp124BI GAGCTC 1 cut(s) 674
Psp6I CCWGG 2 cut(s) 1020, 1088
PspGI CCWGG 2 cut(s) 1020, 1088
PspN4I GGNNCC 7 cut(s) 341, 426, 1001, 1019, 1026, 1244, 1483
PspPI GGNCC 6 cut(s) 78, 340, 994, 1000, 1024, 1092
PstI CTGCAG 2 cut(s) 70, 1454
PstNI CAGNNNCTG 1 cut(s) 1316
PsyI GACNNNGTC 1 cut(s) 998
PvuI CGATCG 1 cut(s) 1333
RruI TCGCGA 1 cut(s) 1329
RsaI GTAC 3 cut(s) 488, 812, 1190
RsaNI GTAC 3 cut(s) 487, 811, 1189
RseI CAYNNNNRTG 2 cut(s) 963, 1420
SacI GAGCTC 1 cut(s) 674
SaqAI TTAA 1 cut(s) 1383
SatI GCNGC 5 cut(s) 176, 179, 321, 924, 1450
Sau3AI GATC 8 cut(s) 3, 90, 114, 406, 436, 1035, 1085, 1330
Sau96I GGNCC 6 cut(s) 78, 340, 994, 1000, 1024, 1092
SchI GAGTC 2 cut(s) 691, 1034
ScrFI CCNGG 5 cut(s) 998, 1022, 1048, 1090, 1378
SduI GDGCHC 2 cut(s) 674, 978
SfaNI GCATC 1 cut(s) 765
SfcI CTRYAG 2 cut(s) 66, 1450
SinI GGWCC 4 cut(s) 78, 994, 1000, 1092
SmiMI CAYNNNNRTG 2 cut(s) 963, 1420
SphI GCATGC 1 cut(s) 1509
Sse9I AATT 9 cut(s) 146, 237, 249, 544, 1155, 1183, 1217, 1444, 1455
SsiI CCGC 2 cut(s) 1044, 1534
SspI AATATT 1 cut(s) 1128
SspMI CTAG 5 cut(s) 554, 920, 944, 962, 1170
SstI GAGCTC 1 cut(s) 674
StyD4I CCNGG 5 cut(s) 996, 1020, 1046, 1088, 1376
StyI CCWWGG 2 cut(s) 1436, 1485
TaaI ACNGT 3 cut(s) 601, 1096, 1232
TaiI ACGT 1 cut(s) 1178
TaqI TCGA 4 cut(s) 1038, 1132, 1333, 1527
TasI AATT 9 cut(s) 146, 237, 249, 544, 1155, 1183, 1217, 1444, 1455
TatI WGTACW 1 cut(s) 486
TfiI GAWTC 2 cut(s) 616, 1120
Tru1I TTAA 1 cut(s) 1383
Tru9I TTAA 1 cut(s) 1383
TscAI CASTG 4 cut(s) 196, 472, 808, 1361
TseFI GTSAC 4 cut(s) 525, 607, 683, 934
TseI GCWGC 5 cut(s) 175, 178, 320, 923, 1449
Tsp45I GTSAC 4 cut(s) 525, 607, 683, 934
TspDTI ATGAA 6 cut(s) 59, 696, 1046, 1095, 1527, 1533
TspRI CASTG 4 cut(s) 196, 472, 808, 1361
Tth111I GACNNNGTC 1 cut(s) 998
Van91I CCANNNNNTGG 1 cut(s) 336
VpaK11BI GGWCC 4 cut(s) 78, 994, 1000, 1092
XagI CCTNNNNNAGG 1 cut(s) 69
XapI RAATTY 3 cut(s) 544, 1217, 1455
XceI RCATGY 1 cut(s) 1509
XcmI CCANNNNNNNNNTGG 2 cut(s) 308, 1353
XmiI GTMKAC 1 cut(s) 1287
XspI CTAG 5 cut(s) 554, 920, 944, 962, 1170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.