Rw1G023610

Fringe-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0011701
Physical Location & Seq
Reverse (-)
49547596 .. 49569075
21480 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G023610.1

Sequence Viewer

Length: 2322 bp
ATGAAAGACAACCCAAAAGACCCAGAAAACCTCTACTCAACATGGACCTTCCCAAAGGTAACAATATGCTTCCTCCTCTTGATCTCTTTCAGCTACATCTCTTACTCTATGAAATTTCTCCACCCATATTTATGTACCCAACAATCTCAATCACTTAATTTCCAATCCCATTTTTCCAAACCCCAATCAGCTGATCCAAACCCACCAACGTCCCAAGAACACAAAACAAACATCTCCCACATCGTTTTTGGCATTGCAGCCTCAGCCGATCTCTGGCATCACAGAAAGAACTACATCAAGCTGTGGTGGAGACCAGACCAAATGAGAGGCCATGTTTGGCTGGACCAACCAGTAAAAACAGACCCCAAATCCAATCACACCCTTTTACCGCCGTTCAAAATCTCAGGCGACACTTCCGGCTTCAACTATACAAACCCAAAAGGCCACCACTCGGCTATAAGAATCTCCCGGATTGTTTCCGAGAGTTTCAGGCTGGGGATGAAGAATGTGAGGTGGTTTGTGCTGGGGGACGACGACACCGTTTTCGTGACCGAGAATCTGGTCAGGGTTTTGCAGAAGTATGATCATAACCAGTTTTACTATATCGGAGGATCGTCGGAGAGTCACTTGCAGAACATAAAGTTTTCGTATAATATGGCTTATGGTGGAGGTGGGATTGCTATAAGTTACTCTTTAGCAAAAGCCCTTGAGAAAATGCAGGACAGTTGTATTCAGAGGTATCCTGGTTTGTACGGCTCCGATGATCGGCTTCAGGCTTGTATGGCTGAGATTGGTGTCCCTCTCACCAGAGAAAAAGGGTTTCATCAGTTTGATGTATATGGGAGCTTGTTTGGCCTCCTGGCAGCTCATCCAATCGCACCCCTAGTGTCACTACACCACCTAGATGTGGTTGAACCCATATTCCCCGATATGGATCGGATCCATGCCTTACAACGGCTCGAGGCTCCAACGAAGCTCGACTCAGCGGGGCTTGCGCAACAATCCATTTGCTACGATATCAATCGGTCCTGGACCATATCTGTTTCCTGGGGCTACGCAGTTCAAATATTTCAGGGTATTTCCTCGGCTCGAGAAATGGAACTGCCACTCAGGACCTTCCTCAATTGGTACAAGAGAGCTGATCATACTGCCTACACATTCAATACGGCCTCGGTCAATAGGCACGCATGTCAAGTACCGTTTGTATATTACTTATCTAATGCTATCTACAATAGAACTACAAATCAAACAACCACCGAGTATGTTCAACATCAAATACGGATGCCAGAATGCAATTGGAAGATGGCAAATCCCTCCCGGATTCACAAAGTGCACGTCCATAAATCCTCCGACCCGCATTTATGGGACAAGCTTGTAATTCGATTTGTTCCTGATAAAAAGTCAAGCTTTGCGTTTGTGAATGCGATTGAGGTCGTTTCTGCACCTAAGGACCTTGTTGCTGACACTGCAATGTATGTGAGTGATGGGAAAGTTGTGGGTTTTGATGGGTTGGGTAAGCAAGCTCTTCAAGTTGTGCATAGGGTCAATGTGGGAGGTCATAAAGTGACGCCCTTTAATGATAGTCTGTGGAGGACTTGGGTTACTGATGAGGAGTTTTTCGATTCGGGTTTCGGGTCGGAGAGGGTTTATTTTGGGGGGAGGATTAAGTATCAGGATGGAGGGGCTAGCCGGGAAGTTGGTCCGGATAATGTGTACAACACTGCAAGATTGATTCGTAGTACGAATGCTTCGATTCCCAATGTGAATATGACATGGGTGTTTCCTGCAGTTGGTGGGTATAAGTATTTGGTTCGGATGCATTTCTGTGATTTTGCTAGTACTTCGCTTGGTTTGTTGTATTTCAATGTTTATGTGAATGGGAATTTGGCATATGAAGATTTGGATTTGTCTAAGGCTGCAAATTATATGTTGGCTTCTCCGTTCTATGCGGATTTTGTGGTTGATGGAGATGCTTTGGATTCTTTGACTGTAAGTGTAGGACCATCGAACGCCAGCATGCCATACGCCATTGATGGTATATTGAATGGTATTGAGATCATGAAGTTGAATAACTCAGTTGGGAGTCTTGATGGTGAGCATTGTGCAGAGTGGGTTTTGAGGAGTTGGCCAAAAGGACATGTTAATCTCTTGGTTCCTCTAGTTGCTGCTGCTTGTGTGCTGTTAAGCTTATCTATGGTTACGCGTAGGAGGATCATGAGGAAGAAGGAATCTGTGGCATGGACGAAACTGCCTGTGGATGTTTCAGAAGTTAATGCCAAGCATGGAAATATACATCAATCGGATAAATTGGAAAGCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF604 Malectin_like

Protein Analysis

773

Amino Acids

87.28

Weight (kDa)

8.31

Isoelectric Point (pI)

42.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fringe PF02434 153 - 276 2e-15 Fringe-like
DUF604 PF04646 211 - 458 1.5e-108 Protein of unknown function, DUF604
Malectin_like PF12819 455 - 688 4.4e-16 Malectin-like domain
Malectin PF11721 511 - 660 1.5e-07 Malectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011701)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G01570 AT1G01570
fragaria_vesca FvH4_7g14990 FvH4_7g14990
prunus_persica Prupe.2G174500_v2.0.a1
pyrus_communis pycom01g09760
rosa_chinensis RchiOBHm_Chr1g0357031
rosa_laevigata RLG00000028059
rosa_multiflora Rmu_sc0000166.1_g000039 Rmu_sc0013980.1_g000025 Rmu_sc0035147.1_g000001
rosa_roxburghii Rroxscaffold_4G00299110
rosa_rugosa Rorug01G0253600 Rorug01G0253700
rosa_samantha Rh1AG267400 Rh1BG235200 Rh1CG251400 Rh1DG262600
rosa_wichuraiana Rw1G023610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 996
AccII CGCG 1 cut(s) 2203
AccIII TCCGGA 1 cut(s) 1702
AciI CCGC 4 cut(s) 389, 986, 1355, 1949
AclWI GGATC 6 cut(s) 188, 619, 934, 942, 947, 2219
AcoI YGGCCR 1 cut(s) 2126
AcsI RAATTY 2 cut(s) 113, 1882
AcuI CTGAAG 1 cut(s) 755
AcyI GRCGYC 1 cut(s) 1568
AdeI CACNNNGTG 1 cut(s) 1330
AfaI GTAC 7 cut(s) 136, 752, 1130, 1197, 1715, 1741, 1840
AfiI CCNNNNNNNGG 7 cut(s) 273, 451, 765, 907, 931, 954, 1790
AflIII ACRYGT 2 cut(s) 2137, 2201
AjiI CACGTC 1 cut(s) 1336
AjnI CCWGG 4 cut(s) 742, 858, 1028, 1046
AjuI GAANNNNNNNTTGG 2 cut(s) 1868, 1900
AloI GAACNNNNNNTCC 2 cut(s) 906, 938
Alw21I GWGCWC 1 cut(s) 1335
Alw26I GTCTC 1 cut(s) 304
Alw44I GTGCAC 1 cut(s) 1331
AlwI GGATC 6 cut(s) 188, 619, 934, 942, 947, 2219
Ama87I CYCGRG 2 cut(s) 959, 1089
Aor13HI TCCGGA 1 cut(s) 1702
AoxI GGCC 5 cut(s) 328, 442, 853, 1167, 2126
ApaLI GTGCAC 1 cut(s) 1331
ApeKI GCWGC 5 cut(s) 257, 863, 1916, 2165, 2168
ApoI RAATTY 2 cut(s) 113, 1882
ArsI GACNNNNNNTTYG 4 cut(s) 527, 559, 1320, 1352
AspLEI GCGC 1 cut(s) 997
AspS9I GGNCC 8 cut(s) 45, 343, 1026, 1032, 1113, 1450, 1700, 2000
AsuC2I CCSGG 3 cut(s) 469, 1318, 1691
AsuHPI GGTGA 2 cut(s) 796, 2105
AsuNHI GCTAGC 1 cut(s) 1685
AvaI CYCGRG 2 cut(s) 959, 1089
AvaII GGWCC 8 cut(s) 45, 343, 1026, 1032, 1113, 1450, 1700, 2000
AxyI CCTNAGG 1 cut(s) 1446
BaeGI GKGCMC 1 cut(s) 1335
BalI TGGCCA 1 cut(s) 2128
BamHI GGATCC 1 cut(s) 939
BarI GAAGNNNNNNTAC 2 cut(s) 1732, 1764
Bbv12I GWGCWC 1 cut(s) 1335
BbvCI CCTCAGC 1 cut(s) 262
BbvI GCAGC 5 cut(s) 269, 875, 1903, 2152, 2155
BccI CCATC 8 cut(s) 1297, 1478, 1499, 1670, 1958, 2011, 2027, 2084
BceAI ACGGC 4 cut(s) 376, 769, 971, 1182
BciT130I CCWGG 4 cut(s) 744, 860, 1030, 1048
BciVI GTATCC 1 cut(s) 750
BclI TGATCA 2 cut(s) 583, 1141
BcnI CCSGG 3 cut(s) 469, 1318, 1691
BcoDI GTCTC 1 cut(s) 304
BfaI CTAG 5 cut(s) 884, 902, 1686, 1836, 2159
BfmI CTRYAG 1 cut(s) 1785
BfuI GTATCC 1 cut(s) 750
BisI GCNGC 5 cut(s) 258, 864, 1917, 2166, 2169
BlsI GCNGC 5 cut(s) 259, 865, 1918, 2167, 2170
BmcAI AGTACT 1 cut(s) 1840
Bme1390I CCNGG 7 cut(s) 469, 744, 860, 1030, 1048, 1318, 1691
Bme18I GGWCC 8 cut(s) 45, 343, 1026, 1032, 1113, 1450, 1700, 2000
BmeT110I CYCGRG 2 cut(s) 959, 1089
BmgBI CACGTC 1 cut(s) 1336
BmgT120I GGNCC 8 cut(s) 45, 343, 1026, 1032, 1113, 1450, 1700, 2000
BmiI GGNNCC 4 cut(s) 757, 941, 966, 2154
BmrFI CCNGG 7 cut(s) 469, 744, 860, 1030, 1048, 1318, 1691
BmsI GCATC 4 cut(s) 286, 1272, 1806, 1960
BmtI GCTAGC 1 cut(s) 1689
Bpu10I CCTNAGC 1 cut(s) 262
BpuEI CTTGAG 1 cut(s) 728
BpuMI CCSGG 3 cut(s) 469, 1318, 1691
BsaBI GATNNNNATC 2 cut(s) 933, 1020
BsaHI GRCGYC 1 cut(s) 1568
BsaI GGTCTC 1 cut(s) 304
BsaJI CCNNGG 3 cut(s) 1047, 1083, 1170
BsaWI WCCGGW 1 cut(s) 1702
Bsc4I CCNNNNNNNGG 7 cut(s) 273, 451, 765, 907, 931, 954, 1790
Bse1I ACTGG 2 cut(s) 350, 592
Bse21I CCTNAGG 1 cut(s) 1446
Bse3DI GCAATG 2 cut(s) 252, 1476
Bse8I GATNNNNATC 2 cut(s) 933, 1020
BseAI TCCGGA 1 cut(s) 1702
BseBI CCWGG 4 cut(s) 744, 860, 1030, 1048
BseDI CCNNGG 3 cut(s) 1047, 1083, 1170
BseGI GGATG 6 cut(s) 504, 868, 1287, 1681, 1821, 2263
BseJI GATNNNNATC 2 cut(s) 933, 1020
BseLI CCNNNNNNNGG 7 cut(s) 273, 451, 765, 907, 931, 954, 1790
BseMI GCAATG 2 cut(s) 252, 1476
BseMII CTCAG 6 cut(s) 276, 417, 777, 996, 1123, 2088
BseNI ACTGG 2 cut(s) 350, 592
BseRI GAGGAG 3 cut(s) 65, 1625, 2134
BseSI GKGCMC 1 cut(s) 1335
BseXI GCAGC 5 cut(s) 269, 875, 1903, 2152, 2155
BseYI CCCAGC 2 cut(s) 493, 523
BsgI GTGCAG 2 cut(s) 1425, 2124
Bsh1236I CGCG 1 cut(s) 2203
BshFI GGCC 5 cut(s) 330, 444, 855, 1169, 2128
BsiHKAI GWGCWC 1 cut(s) 1335
BsiHKCI CYCGRG 2 cut(s) 959, 1089
BsiSI CCGG 5 cut(s) 417, 469, 1318, 1690, 1703
BslFI GGGAC 4 cut(s) 196, 542, 782, 1379
BslI CCNNNNNNNGG 7 cut(s) 273, 451, 765, 907, 931, 954, 1790
BsmAI GTCTC 1 cut(s) 304
BsmFI GGGAC 4 cut(s) 196, 542, 782, 1379
BsmI GAATGC 3 cut(s) 1295, 1426, 1750
BsnI GGCC 5 cut(s) 330, 444, 855, 1169, 2128
Bso31I GGTCTC 1 cut(s) 304
BsoBI CYCGRG 2 cut(s) 959, 1089
Bsp1286I GDGCHC 1 cut(s) 1335
Bsp13I TCCGGA 1 cut(s) 1702
Bsp1407I TGTACA 1 cut(s) 1713
BspACI CCGC 4 cut(s) 389, 986, 1355, 1949
BspANI GGCC 5 cut(s) 330, 444, 855, 1169, 2128
BspCNI CTCAG 6 cut(s) 275, 416, 778, 995, 1122, 2087
BspEI TCCGGA 1 cut(s) 1702
BspFNI CGCG 1 cut(s) 2203
BspHI TCATGA 2 cut(s) 2058, 2214
BspLI GGNNCC 4 cut(s) 757, 941, 966, 2154
BspMAI CTGCAG 1 cut(s) 1789
BspOI GCTAGC 1 cut(s) 1689
BspPI GGATC 6 cut(s) 188, 619, 934, 942, 947, 2219
BspQI GCTCTTC 1 cut(s) 1530
BspTNI GGTCTC 1 cut(s) 304
BsrDI GCAATG 2 cut(s) 252, 1476
BsrGI TGTACA 1 cut(s) 1713
BsrI ACTGG 2 cut(s) 350, 592
BssECI CCNNGG 3 cut(s) 1047, 1083, 1170
BssNI GRCGYC 1 cut(s) 1568
Bst2UI CCWGG 4 cut(s) 744, 860, 1030, 1048
Bst4CI ACNGT 4 cut(s) 541, 725, 1200, 1990
Bst6I CTCTTC 1 cut(s) 1530
BstACI GRCGYC 1 cut(s) 1568
BstAUI TGTACA 1 cut(s) 1713
BstC8I GCNNGC 6 cut(s) 993, 1185, 1521, 1687, 2014, 2018
BstDEI CTNAG 8 cut(s) 262, 403, 786, 982, 1109, 1446, 1911, 2074
BstF5I GGATG 6 cut(s) 504, 868, 1287, 1681, 1821, 2263
BstFNI CGCG 1 cut(s) 2203
BstHHI GCGC 1 cut(s) 997
BstMAI GTCTC 1 cut(s) 304
BstMWI GCNNNNNNNGC 5 cut(s) 263, 782, 852, 992, 1466
BstNI CCWGG 4 cut(s) 744, 860, 1030, 1048
BstNSI RCATGY 3 cut(s) 1191, 2020, 2141
BstSCI CCNGG 7 cut(s) 467, 742, 858, 1028, 1046, 1316, 1689
BstSFI CTRYAG 1 cut(s) 1785
BstSLI GKGCMC 1 cut(s) 1335
BstUI CGCG 1 cut(s) 2203
BstV1I GCAGC 5 cut(s) 269, 875, 1903, 2152, 2155
BstX2I RGATCY 1 cut(s) 939
BstYI RGATCY 1 cut(s) 939
Bsu36I CCTNAGG 1 cut(s) 1446
BsuI GTATCC 1 cut(s) 750
BsuRI GGCC 5 cut(s) 330, 444, 855, 1169, 2128
BtrI CACGTC 1 cut(s) 1336
BtsCI GGATG 6 cut(s) 504, 868, 1287, 1681, 1821, 2263
BtsI GCAGTG 2 cut(s) 1464, 1719
BtsIMutI CAGTG 2 cut(s) 1464, 1719
Cac8I GCNNGC 6 cut(s) 993, 1185, 1521, 1687, 2014, 2018
CciI TCATGA 2 cut(s) 2058, 2214
CfoI GCGC 1 cut(s) 997
Cfr13I GGNCC 8 cut(s) 45, 343, 1026, 1032, 1113, 1450, 1700, 2000
CseI GACGC 1 cut(s) 1576
Csp6I GTAC 7 cut(s) 135, 751, 1129, 1196, 1714, 1740, 1839
CviQI GTAC 7 cut(s) 135, 751, 1129, 1196, 1714, 1740, 1839
DdeI CTNAG 8 cut(s) 262, 403, 786, 982, 1109, 1446, 1911, 2074
DraIII CACNNNGTG 1 cut(s) 1330
EaeI YGGCCR 1 cut(s) 2126
Eam1104I CTCTTC 1 cut(s) 1530
EarI CTCTTC 1 cut(s) 1530
Eco31I GGTCTC 1 cut(s) 304
Eco32I GATATC 1 cut(s) 1018
Eco47I GGWCC 8 cut(s) 45, 343, 1026, 1032, 1113, 1450, 1700, 2000
Eco57I CTGAAG 1 cut(s) 755
Eco81I CCTNAGG 1 cut(s) 1446
Eco88I CYCGRG 2 cut(s) 959, 1089
EcoO109I RGGNCCY 2 cut(s) 1113, 1450
EcoRII CCWGG 4 cut(s) 742, 858, 1028, 1046
EcoRV GATATC 1 cut(s) 1018
EcoT22I ATGCAT 1 cut(s) 1821
FalI AAGNNNNNCTT 4 cut(s) 676, 708, 1391, 1423
FaqI GGGAC 4 cut(s) 196, 542, 782, 1379
FauI CCCGC 2 cut(s) 979, 1362
FauNDI CATATG 1 cut(s) 1891
FbaI TGATCA 2 cut(s) 583, 1141
Fnu4HI GCNGC 5 cut(s) 258, 864, 1917, 2166, 2169
FokI GGATG 6 cut(s) 511, 855, 1294, 1688, 1828, 2270
Fsp4HI GCNGC 5 cut(s) 258, 864, 1917, 2166, 2169
FspBI CTAG 5 cut(s) 884, 902, 1686, 1836, 2159
FspI TGCGCA 1 cut(s) 996
GlaI GCGC 1 cut(s) 996
GluI GCNGC 5 cut(s) 258, 864, 1917, 2166, 2169
GsaI CCCAGC 2 cut(s) 497, 527
HaeIII GGCC 5 cut(s) 330, 444, 855, 1169, 2128
HapII CCGG 5 cut(s) 417, 469, 1318, 1690, 1703
HgaI GACGC 1 cut(s) 1576
HhaI GCGC 1 cut(s) 997
Hin1I GRCGYC 1 cut(s) 1568
Hin6I GCGC 1 cut(s) 995
HinP1I GCGC 1 cut(s) 995
HindIII AAGCTT 3 cut(s) 1370, 1405, 2185
HpaII CCGG 5 cut(s) 417, 469, 1318, 1690, 1703
HphI GGTGA 2 cut(s) 796, 2105
Hpy166II GTNNAC 2 cut(s) 1333, 1714
Hpy8I GTNNAC 2 cut(s) 1333, 1714
Hpy99I CGWCG 2 cut(s) 536, 619
HpyAV CCTTC 3 cut(s) 58, 1126, 2218
HpyCH4III ACNGT 4 cut(s) 541, 725, 1200, 1990
HpyCH4IV ACGT 2 cut(s) 209, 1335
HpyF10VI GCNNNNNNNGC 5 cut(s) 263, 782, 852, 992, 1466
HpyF3I CTNAG 8 cut(s) 262, 403, 786, 982, 1109, 1446, 1911, 2074
HpySE526I ACGT 2 cut(s) 209, 1335
Hsp92I GRCGYC 1 cut(s) 1568
HspAI GCGC 1 cut(s) 995
Kpn2I TCCGGA 1 cut(s) 1702
Ksp22I TGATCA 2 cut(s) 583, 1141
LguI GCTCTTC 1 cut(s) 1530
LmnI GCTCC 3 cut(s) 761, 843, 970
Lsp1109I GCAGC 5 cut(s) 269, 875, 1903, 2152, 2155
LweI GCATC 4 cut(s) 286, 1272, 1806, 1960
MaeI CTAG 5 cut(s) 884, 902, 1686, 1836, 2159
MaeII ACGT 2 cut(s) 209, 1335
MaeIII GTNAC 8 cut(s) 58, 547, 623, 686, 888, 1564, 1600, 2197
MboII GAAGA 5 cut(s) 514, 1312, 1517, 1907, 2233
MfeI CAATTG 2 cut(s) 1123, 1294
MflI RGATCY 1 cut(s) 939
MhlI GDGCHC 1 cut(s) 1335
MlsI TGGCCA 1 cut(s) 2128
MluCI AATT 8 cut(s) 113, 157, 1123, 1294, 1377, 1882, 1921, 2306
MluI ACGCGT 1 cut(s) 2201
MluNI TGGCCA 1 cut(s) 2128
MlyI GAGTC 3 cut(s) 631, 974, 2092
MmeI TCCRAC 4 cut(s) 597, 992, 1374, 1617
Mox20I TGGCCA 1 cut(s) 2128
Mph1103I ATGCAT 1 cut(s) 1821
MroI TCCGGA 1 cut(s) 1702
MscI TGGCCA 1 cut(s) 2128
MseI TTAA 6 cut(s) 156, 1575, 1665, 2142, 2183, 2271
MslI CAYNNNNRTG 4 cut(s) 130, 903, 1469, 1824
Msp20I TGGCCA 1 cut(s) 2128
MspA1I CMGCKG 2 cut(s) 191, 986
MspI CCGG 5 cut(s) 417, 469, 1318, 1690, 1703
MspR9I CCNGG 7 cut(s) 469, 744, 860, 1030, 1048, 1318, 1691
MunI CAATTG 2 cut(s) 1123, 1294
Mva1269I GAATGC 3 cut(s) 1295, 1426, 1750
MvaI CCWGG 4 cut(s) 744, 860, 1030, 1048
MvnI CGCG 1 cut(s) 2203
MwoI GCNNNNNNNGC 5 cut(s) 263, 782, 852, 992, 1466
NciI CCSGG 3 cut(s) 469, 1318, 1691
NdeI CATATG 1 cut(s) 1891
NheI GCTAGC 1 cut(s) 1685
NlaIV GGNNCC 4 cut(s) 757, 941, 966, 2154
NmeAIII GCCGAG 2 cut(s) 431, 1064
NmuCI GTSAC 4 cut(s) 547, 623, 888, 1564
NsbI TGCGCA 1 cut(s) 996
NsiI ATGCAT 1 cut(s) 1821
NspI RCATGY 3 cut(s) 1191, 2020, 2141
PaeI GCATGC 1 cut(s) 2020
PaeR7I CTCGAG 2 cut(s) 959, 1089
PagI TCATGA 2 cut(s) 2058, 2214
PciI ACATGT 1 cut(s) 2137
PciSI GCTCTTC 1 cut(s) 1530
PcsI WCGNNNNNNNCGW 2 cut(s) 537, 1748
PctI GAATGC 3 cut(s) 1295, 1426, 1750
PfeI GAWTC 8 cut(s) 462, 556, 1321, 1622, 1732, 1753, 1979, 2228
PfoI TCCNGGA 3 cut(s) 467, 1028, 1316
PkrI GCNGC 5 cut(s) 259, 865, 1918, 2167, 2170
PleI GAGTC 3 cut(s) 630, 974, 2091
PpsI GAGTC 3 cut(s) 630, 974, 2091
PpuMI RGGWCCY 2 cut(s) 1113, 1450
PscI ACATGT 1 cut(s) 2137
Psp5II RGGWCCY 2 cut(s) 1113, 1450
Psp6I CCWGG 4 cut(s) 742, 858, 1028, 1046
PspFI CCCAGC 2 cut(s) 493, 523
PspGI CCWGG 4 cut(s) 742, 858, 1028, 1046
PspN4I GGNNCC 4 cut(s) 757, 941, 966, 2154
PspPI GGNCC 8 cut(s) 45, 343, 1026, 1032, 1113, 1450, 1700, 2000
PspPPI RGGWCCY 2 cut(s) 1113, 1450
PspXI VCTCGAGB 1 cut(s) 959
PstI CTGCAG 1 cut(s) 1789
PsuI RGATCY 1 cut(s) 939
PvuII CAGCTG 1 cut(s) 191
RsaI GTAC 7 cut(s) 136, 752, 1130, 1197, 1715, 1741, 1840
RsaNI GTAC 7 cut(s) 135, 751, 1129, 1196, 1714, 1740, 1839
RseI CAYNNNNRTG 4 cut(s) 130, 903, 1469, 1824
SapI GCTCTTC 1 cut(s) 1530
SaqAI TTAA 6 cut(s) 156, 1575, 1665, 2142, 2183, 2271
SatI GCNGC 5 cut(s) 258, 864, 1917, 2166, 2169
Sau96I GGNCC 8 cut(s) 45, 343, 1026, 1032, 1113, 1450, 1700, 2000
ScaI AGTACT 1 cut(s) 1840
SchI GAGTC 3 cut(s) 631, 974, 2092
ScrFI CCNGG 7 cut(s) 469, 744, 860, 1030, 1048, 1318, 1691
SduI GDGCHC 1 cut(s) 1335
SfaNI GCATC 4 cut(s) 286, 1272, 1806, 1960
SfcI CTRYAG 1 cut(s) 1785
Sfr274I CTCGAG 2 cut(s) 959, 1089
SinI GGWCC 8 cut(s) 45, 343, 1026, 1032, 1113, 1450, 1700, 2000
SlaI CTCGAG 2 cut(s) 959, 1089
SmiMI CAYNNNNRTG 4 cut(s) 130, 903, 1469, 1824
SmlI CTYRAG 3 cut(s) 707, 959, 1089
SmoI CTYRAG 3 cut(s) 707, 959, 1089
SphI GCATGC 1 cut(s) 2020
Sse9I AATT 8 cut(s) 113, 157, 1123, 1294, 1377, 1882, 1921, 2306
SsiI CCGC 4 cut(s) 389, 986, 1355, 1949
SspI AATATT 1 cut(s) 1068
SspMI CTAG 5 cut(s) 884, 902, 1686, 1836, 2159
StyD4I CCNGG 7 cut(s) 467, 742, 858, 1028, 1046, 1316, 1689
TaaI ACNGT 4 cut(s) 541, 725, 1200, 1990
TaiI ACGT 2 cut(s) 212, 1338
TaqI TCGA 7 cut(s) 960, 978, 1090, 1381, 1620, 1751, 2006
TaqII GACCGA 3 cut(s) 566, 1014, 1162
TasI AATT 8 cut(s) 113, 157, 1123, 1294, 1377, 1882, 1921, 2306
TatI WGTACW 2 cut(s) 1713, 1838
TfiI GAWTC 8 cut(s) 462, 556, 1321, 1622, 1732, 1753, 1979, 2228
Tru1I TTAA 6 cut(s) 156, 1575, 1665, 2142, 2183, 2271
Tru9I TTAA 6 cut(s) 156, 1575, 1665, 2142, 2183, 2271
TscAI CASTG 2 cut(s) 1471, 1726
TseFI GTSAC 4 cut(s) 547, 623, 888, 1564
TseI GCWGC 5 cut(s) 257, 863, 1916, 2165, 2168
Tsp45I GTSAC 4 cut(s) 547, 623, 888, 1564
TspDTI ATGAA 6 cut(s) 17, 125, 515, 812, 1908, 2075
TspGWI ACGGA 2 cut(s) 1294, 1929
TspRI CASTG 2 cut(s) 1471, 1726
VneI GTGCAC 1 cut(s) 1331
VpaK11BI GGWCC 8 cut(s) 45, 343, 1026, 1032, 1113, 1450, 1700, 2000
XapI RAATTY 2 cut(s) 113, 1882
XceI RCATGY 3 cut(s) 1191, 2020, 2141
XcmI CCANNNNNNNNNTGG 2 cut(s) 245, 1293
XhoI CTCGAG 2 cut(s) 959, 1089
XspI CTAG 5 cut(s) 884, 902, 1686, 1836, 2159
ZrmI AGTACT 1 cut(s) 1840
Zsp2I ATGCAT 1 cut(s) 1821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.