Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0009202

Physical Location & Seq

Genomic Coordinates Reverse (-)

22506940 .. 22510062

Gene Structure 3123 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G182700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1161 bp

ATGAGACTGCGTTTGCCAAAAGCTTGTGACCTGCAGAAGCTTTTTCTTGCAGGGATGGCAATGGTGGCAACTCTGAGTTGTTTAAGTCATTCCAAATGCGAGTTTGAGGCAATCTTCAATTTTGGGGACTCGAATTCAGACACAGGCGGGTTTTGGGCAGCTTTTCCAGCACAATCTGGACCCTATGGCATGACCTACTTCAAGAGACCTGTTGGTCGGGCTACAGATGGGAGGCTCATGCTTGATTTCTTGGCTCAAGCTCTAGGGTTGCCATTCATAAGCCCATATCTGCAATCGATTGGATCCGACTATAGACATGGGGCCAACTATGCTACGTTGGCATCCACTGTGCTTTTGCCAAACACGTCCTTATTTGTCACTGGAATCAGCCCATTCTCTCTAGCCATCCAGCTCAACCAAATGAAGGCATTCAAGGCCCAAGTTGAAGAACACTCCTGGGATCAACAAGAATCAAAGAGACTTCCGTCCTGGGACATTTTCGGGAAATCACTCTACACGTTCTACATTGGCCAAAACGATTTCACCTCCAATTTGGCAGCCATTGGTGTAGGTGGAGTGAAGCAATATCTTCCTCAAGTGGTCTCCCAAATTGCTGGTACTATCAAGGAGCTATATGCCTTAGGAGGGCGGGCATTTCTGGTACTTAATCTGGCACCAGTGGGTTGCTACCCATCATTTTTGGTGGGGCTACCTCCTTCTGAACTTGATGCGTTTGGATGCTCGATTTCTTACAACAACGCAGTTGTAGACTACAACAACATGTTGAAGGAGACACTCAGACAAACCAGAGGCTCTCTCCCAAATGCTTCCCTCATATATGTGGACACCTCCTCTGTTTTGCTAGAGCTCTTCAGACATCCCACATCTCATGGGCTTAAGTATGGTACCAAAGCATGTTGTGGGCATGGGGGTGGTGCCCACAATTTTGACCCTAGAGTTTTTTGTGGAAACACAAAGGTGATCAATGGGAGAACTGTGACTGCAACAGCTAGTAGTGATCCTTACAACTATGTAAGCTGGGATGGAGTCCATGCCACAGAAGCTGCAAACAAGCTTGTTACATGGGCTATCCTCAATGGCTCTTATTCAGATCCTCCTTTTCCATTTCATGACTTCTGTGACCTCCAACCTTTAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_GDSL

Protein Analysis

387

Amino Acids

42.08

Weight (kDa)

7.08

Isoelectric Point (pI)

36.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01130 AT4G01130 AT4G01130
fragaria_vesca	FvH4_7g15800 FvH4_7g15800 FvH4_7g15800 FvH4_7g15800
malus_domestica	MD07G1143600.v1.1 MD07G1143700.v1.1
prunus_persica	Prupe.2G182700_v2.0.a1
pyrus_communis	pycom07g14210
rosa_chinensis	RchiOBHm_Chr1g0358591
rosa_laevigata	RLG00000027943
rosa_multiflora	Rmu_sc0001609.1_g000017
rosa_roxburghii	Rroxscaffold_4G00297770
rosa_rugosa	Rorug01G0262700 Rorug01G0262700
rosa_samantha	Rh1AG277700 Rh1BG244400 Rh1CG261200 Rh1DG272600
rosa_wichuraiana	Rw1G024660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	213
Acc36I	ACCTGC	1 cut(s)	39
Acc65I	GGTACC	1 cut(s)	905
AccB1I	GGYRCC	3 cut(s)	673, 905, 935
AccI	GTMKAC	1 cut(s)	768
AciI	CCGC	2 cut(s)	147, 649
AclWI	GGATC	5 cut(s)	297, 310, 468, 1013, 1106
AcoI	YGGCCR	1 cut(s)	529
AcsI	RAATTY	1 cut(s)	133
AcuI	CTGAAG	1 cut(s)	856
AfaI	GTAC	3 cut(s)	619, 663, 907
AfiI	CCNNNNNNNGG	2 cut(s)	424, 645
AflII	CTTAAG	1 cut(s)	896
AflIII	ACRYGT	3 cut(s)	363, 516, 780
AgsI	TTSAA	5 cut(s)	118, 202, 433, 446, 787
AjiI	CACGTC	1 cut(s)	366
AjnI	CCWGG	2 cut(s)	455, 488
AleI	CACNNNNGTG	1 cut(s)	977
Alw21I	GWGCWC	1 cut(s)	870
Alw26I	GTCTC	4 cut(s)	199, 472, 607, 785
AlwI	GGATC	5 cut(s)	297, 310, 468, 1013, 1106
AlwNI	CAGNNNCTG	1 cut(s)	1064
AoxI	GGCC	3 cut(s)	321, 435, 529
ApeKI	GCWGC	3 cut(s)	158, 557, 1064
ApoI	RAATTY	1 cut(s)	133
Asp700I	GAANNNNTTC	1 cut(s)	428
Asp718I	GGTACC	1 cut(s)	905
AspS9I	GGNCC	3 cut(s)	179, 321, 436
AsuHPI	GGTGA	2 cut(s)	535, 991
AvaII	GGWCC	1 cut(s)	179
AxyI	CCTNAGG	1 cut(s)	640
BaeGI	GKGCMC	1 cut(s)	940
BalI	TGGCCA	1 cut(s)	531
BamHI	GGATCC	1 cut(s)	302
BanI	GGYRCC	3 cut(s)	673, 905, 935
BanII	GRGCYC	1 cut(s)	870
Bbv12I	GWGCWC	1 cut(s)	870
BbvI	GCAGC	3 cut(s)	170, 569, 1051
BccI	CCATC	5 cut(s)	49, 221, 413, 700, 1037
BciT130I	CCWGG	2 cut(s)	457, 490
BclI	TGATCA	1 cut(s)	981
BcoDI	GTCTC	4 cut(s)	199, 472, 607, 785
BfaI	CTAG	5 cut(s)	263, 401, 863, 954, 1011
BfmI	CTRYAG	3 cut(s)	32, 222, 310
BfrI	CTTAAG	1 cut(s)	896
BfuAI	ACCTGC	1 cut(s)	39
BisI	GCNGC	3 cut(s)	159, 558, 1065
BlsI	GCNGC	3 cut(s)	160, 559, 1066
Bme1390I	CCNGG	2 cut(s)	457, 490
Bme18I	GGWCC	1 cut(s)	179
BmgBI	CACGTC	1 cut(s)	366
BmgT120I	GGNCC	3 cut(s)	179, 321, 436
BmiI	GGNNCC	6 cut(s)	181, 304, 322, 675, 907, 937
BmrFI	CCNGG	2 cut(s)	457, 490
BmsI	GCATC	3 cut(s)	350, 718, 728
BoxI	GACNNNNGTC	1 cut(s)	484
BplI	GAGNNNNNCTC	2 cut(s)	801, 833
BpuEI	CTTGAG	2 cut(s)	240, 579
Bsa29I	ATCGAT	1 cut(s)	296
BsaI	GGTCTC	2 cut(s)	199, 607
BsaJI	CCNNGG	2 cut(s)	456, 489
Bsc4I	CCNNNNNNNGG	2 cut(s)	424, 645
Bse1I	ACTGG	2 cut(s)	385, 677
Bse21I	CCTNAGG	1 cut(s)	640
Bse3DI	GCAATG	1 cut(s)	66
BseBI	CCWGG	2 cut(s)	457, 490
BseCI	ATCGAT	1 cut(s)	296
BseDI	CCNNGG	2 cut(s)	456, 489
BseGI	GGATG	6 cut(s)	60, 341, 405, 743, 877, 1048
BseLI	CCNNNNNNNGG	2 cut(s)	424, 645
BseMI	GCAATG	1 cut(s)	66
BseMII	CTCAG	2 cut(s)	65, 811
BseNI	ACTGG	2 cut(s)	385, 677
BseRI	GAGGAG	1 cut(s)	841
BseSI	GKGCMC	1 cut(s)	940
BseXI	GCAGC	3 cut(s)	170, 569, 1051
BseYI	CCCAGC	1 cut(s)	1038
BshFI	GGCC	3 cut(s)	323, 437, 531
BshNI	GGYRCC	3 cut(s)	673, 905, 935
BshVI	ATCGAT	1 cut(s)	296
BsiHKAI	GWGCWC	1 cut(s)	870
BslFI	GGGAC	2 cut(s)	140, 506
BslI	CCNNNNNNNGG	2 cut(s)	424, 645
BsmAI	GTCTC	4 cut(s)	199, 472, 607, 785
BsmFI	GGGAC	2 cut(s)	140, 506
BsmI	GAATGC	1 cut(s)	428
BsnI	GGCC	3 cut(s)	323, 437, 531
Bso31I	GGTCTC	2 cut(s)	199, 607
Bsp1286I	GDGCHC	2 cut(s)	870, 940
Bsp143I	GATC	5 cut(s)	302, 460, 981, 1018, 1111
BspACI	CCGC	2 cut(s)	147, 649
BspANI	GGCC	3 cut(s)	323, 437, 531
BspCNI	CTCAG	2 cut(s)	66, 810
BspDI	ATCGAT	1 cut(s)	296
BspHI	TCATGA	1 cut(s)	1129
BspLI	GGNNCC	6 cut(s)	181, 304, 322, 675, 907, 937
BspMAI	CTGCAG	1 cut(s)	36
BspMI	ACCTGC	1 cut(s)	39
BspPI	GGATC	5 cut(s)	297, 310, 468, 1013, 1106
BspQI	GCTCTTC	1 cut(s)	875
BspT107I	GGYRCC	3 cut(s)	673, 905, 935
BspTI	CTTAAG	1 cut(s)	896
BspTNI	GGTCTC	2 cut(s)	199, 607
BsrDI	GCAATG	1 cut(s)	66
BsrI	ACTGG	2 cut(s)	385, 677
BssECI	CCNNGG	2 cut(s)	456, 489
BssMI	GATC	5 cut(s)	302, 460, 981, 1018, 1111
Bst2UI	CCWGG	2 cut(s)	457, 490
Bst4CI	ACNGT	2 cut(s)	349, 997
Bst6I	CTCTTC	1 cut(s)	875
BstAFI	CTTAAG	1 cut(s)	896
BstC8I	GCNNGC	1 cut(s)	651
BstDEI	CTNAG	3 cut(s)	74, 640, 797
BstF5I	GGATG	6 cut(s)	60, 341, 405, 743, 877, 1048
BstKTI	GATC	5 cut(s)	305, 463, 984, 1021, 1114
BstMAI	GTCTC	4 cut(s)	199, 472, 607, 785
BstMBI	GATC	5 cut(s)	302, 460, 981, 1018, 1111
BstMWI	GCNNNNNNNGC	7 cut(s)	56, 65, 167, 329, 338, 434, 1061
BstNI	CCWGG	2 cut(s)	457, 490
BstNSI	RCATGY	2 cut(s)	784, 918
BstPAI	GACNNNNGTC	1 cut(s)	484
BstSCI	CCNGG	2 cut(s)	455, 488
BstSFI	CTRYAG	3 cut(s)	32, 222, 310
BstSLI	GKGCMC	1 cut(s)	940
BstV1I	GCAGC	3 cut(s)	170, 569, 1051
BstX2I	RGATCY	2 cut(s)	302, 1111
BstXI	CCANNNNNNTGG	1 cut(s)	614
BstYI	RGATCY	2 cut(s)	302, 1111
Bsu15I	ATCGAT	1 cut(s)	296
Bsu36I	CCTNAGG	1 cut(s)	640
BsuRI	GGCC	3 cut(s)	323, 437, 531
BsuTUI	ATCGAT	1 cut(s)	296
BtrI	CACGTC	1 cut(s)	366
BtsCI	GGATG	6 cut(s)	60, 341, 405, 743, 877, 1048
BtsIMutI	CAGTG	3 cut(s)	345, 378, 684
BveI	ACCTGC	1 cut(s)	39
Cac8I	GCNNGC	1 cut(s)	651
CaiI	CAGNNNCTG	1 cut(s)	1064
CciI	TCATGA	1 cut(s)	1129
Cfr13I	GGNCC	3 cut(s)	179, 321, 436
ClaI	ATCGAT	1 cut(s)	296
Csp6I	GTAC	3 cut(s)	618, 662, 906
CviQI	GTAC	3 cut(s)	618, 662, 906
DdeI	CTNAG	3 cut(s)	74, 640, 797
DpnI	GATC	5 cut(s)	304, 462, 983, 1020, 1113
DpnII	GATC	5 cut(s)	302, 460, 981, 1018, 1111
DraI	TTTAAA	1 cut(s)	1155
DrdI	GACNNNNNNGTC	1 cut(s)	213
DseDI	GACNNNNNNGTC	1 cut(s)	213
EaeI	YGGCCR	1 cut(s)	529
Eam1104I	CTCTTC	1 cut(s)	875
EarI	CTCTTC	1 cut(s)	875
Ecl136II	GAGCTC	1 cut(s)	868
Eco24I	GRGCYC	1 cut(s)	870
Eco31I	GGTCTC	2 cut(s)	199, 607
Eco47I	GGWCC	1 cut(s)	179
Eco53kI	GAGCTC	1 cut(s)	868
Eco57I	CTGAAG	1 cut(s)	856
Eco81I	CCTNAGG	1 cut(s)	640
EcoICRI	GAGCTC	1 cut(s)	868
EcoRI	GAATTC	1 cut(s)	133
EcoRII	CCWGG	2 cut(s)	455, 488
EcoT38I	GRGCYC	1 cut(s)	870
FaqI	GGGAC	2 cut(s)	140, 506
FauI	CCCGC	2 cut(s)	140, 642
FbaI	TGATCA	1 cut(s)	981
FblI	GTMKAC	1 cut(s)	768
Fnu4HI	GCNGC	3 cut(s)	159, 558, 1065
FokI	GGATG	6 cut(s)	67, 328, 392, 750, 864, 1055
FriOI	GRGCYC	1 cut(s)	870
Fsp4HI	GCNGC	3 cut(s)	159, 558, 1065
FspBI	CTAG	5 cut(s)	263, 401, 863, 954, 1011
GluI	GCNGC	3 cut(s)	159, 558, 1065
GsaI	CCCAGC	1 cut(s)	1042
HaeIII	GGCC	3 cut(s)	323, 437, 531
HindIII	AAGCTT	3 cut(s)	21, 38, 1073
HinfI	GANTC	4 cut(s)	128, 384, 470, 1047
HphI	GGTGA	2 cut(s)	535, 991
Hpy166II	GTNNAC	2 cut(s)	769, 844
Hpy188I	TCNGA	7 cut(s)	75, 139, 307, 721, 800, 875, 1111
Hpy188III	TCNNGA	4 cut(s)	177, 202, 502, 1130
Hpy8I	GTNNAC	2 cut(s)	769, 844
HpyAV	CCTTC	3 cut(s)	418, 726, 781
HpyCH4III	ACNGT	2 cut(s)	349, 997
HpyCH4IV	ACGT	3 cut(s)	335, 365, 518
HpyCH4V	TGCA	5 cut(s)	34, 50, 292, 1004, 1067
HpyF10VI	GCNNNNNNNGC	7 cut(s)	56, 65, 167, 329, 338, 434, 1061
HpyF3I	CTNAG	3 cut(s)	74, 640, 797
HpySE526I	ACGT	3 cut(s)	335, 365, 518
KpnI	GGTACC	1 cut(s)	909
Ksp22I	TGATCA	1 cut(s)	981
Kzo9I	GATC	5 cut(s)	302, 460, 981, 1018, 1111
LguI	GCTCTTC	1 cut(s)	875
LmnI	GCTCC	1 cut(s)	628
Lsp1109I	GCAGC	3 cut(s)	170, 569, 1051
LweI	GCATC	3 cut(s)	350, 718, 728
MaeI	CTAG	5 cut(s)	263, 401, 863, 954, 1011
MaeII	ACGT	3 cut(s)	335, 365, 518
MaeIII	GTNAC	5 cut(s)	26, 376, 997, 1078, 1139
MalI	GATC	5 cut(s)	304, 462, 983, 1020, 1113
MboI	GATC	5 cut(s)	302, 460, 981, 1018, 1111
MboII	GAAGA	4 cut(s)	106, 458, 581, 862
MflI	RGATCY	2 cut(s)	302, 1111
MhlI	GDGCHC	2 cut(s)	870, 940
MlsI	TGGCCA	1 cut(s)	531
MluCI	AATT	6 cut(s)	118, 133, 550, 609, 943, 1156
MluNI	TGGCCA	1 cut(s)	531
MlyI	GAGTC	2 cut(s)	122, 1056
MmeI	TCCRAC	1 cut(s)	330
Mox20I	TGGCCA	1 cut(s)	531
MroXI	GAANNNNTTC	1 cut(s)	428
MscI	TGGCCA	1 cut(s)	531
MseI	TTAA	4 cut(s)	83, 666, 897, 1154
MslI	CAYNNNNRTG	3 cut(s)	839, 930, 977
Msp20I	TGGCCA	1 cut(s)	531
MspCI	CTTAAG	1 cut(s)	896
MspR9I	CCNGG	2 cut(s)	457, 490
Mva1269I	GAATGC	1 cut(s)	428
MvaI	CCWGG	2 cut(s)	457, 490
MwoI	GCNNNNNNNGC	7 cut(s)	56, 65, 167, 329, 338, 434, 1061
NdeII	GATC	5 cut(s)	302, 460, 981, 1018, 1111
NlaIV	GGNNCC	6 cut(s)	181, 304, 322, 675, 907, 937
NmuCI	GTSAC	4 cut(s)	26, 376, 997, 1139
NspI	RCATGY	2 cut(s)	784, 918
OliI	CACNNNNGTG	1 cut(s)	977
PagI	TCATGA	1 cut(s)	1129
PciI	ACATGT	1 cut(s)	780
PciSI	GCTCTTC	1 cut(s)	875
PctI	GAATGC	1 cut(s)	428
PdmI	GAANNNNTTC	1 cut(s)	428
PfeI	GAWTC	2 cut(s)	384, 470
PkrI	GCNGC	3 cut(s)	160, 559, 1066
PleI	GAGTC	2 cut(s)	122, 1055
PpsI	GAGTC	2 cut(s)	122, 1055
PscI	ACATGT	1 cut(s)	780
PshAI	GACNNNNGTC	1 cut(s)	484
Psp124BI	GAGCTC	1 cut(s)	870
Psp6I	CCWGG	2 cut(s)	455, 488
PspFI	CCCAGC	1 cut(s)	1038
PspGI	CCWGG	2 cut(s)	455, 488
PspN4I	GGNNCC	6 cut(s)	181, 304, 322, 675, 907, 937
PspPI	GGNCC	3 cut(s)	179, 321, 436
PstI	CTGCAG	1 cut(s)	36
PstNI	CAGNNNCTG	1 cut(s)	1064
PsuI	RGATCY	2 cut(s)	302, 1111
RsaI	GTAC	3 cut(s)	619, 663, 907
RsaNI	GTAC	3 cut(s)	618, 662, 906
RseI	CAYNNNNRTG	3 cut(s)	839, 930, 977
SacI	GAGCTC	1 cut(s)	870
SapI	GCTCTTC	1 cut(s)	875
SaqAI	TTAA	4 cut(s)	83, 666, 897, 1154
SatI	GCNGC	3 cut(s)	159, 558, 1065
Sau3AI	GATC	5 cut(s)	302, 460, 981, 1018, 1111
Sau96I	GGNCC	3 cut(s)	179, 321, 436
SchI	GAGTC	2 cut(s)	122, 1056
ScrFI	CCNGG	2 cut(s)	457, 490
SduI	GDGCHC	2 cut(s)	870, 940
SfaNI	GCATC	3 cut(s)	350, 718, 728
SfcI	CTRYAG	3 cut(s)	32, 222, 310
SinI	GGWCC	1 cut(s)	179
SmiMI	CAYNNNNRTG	3 cut(s)	839, 930, 977
SmlI	CTYRAG	3 cut(s)	255, 594, 896
SmoI	CTYRAG	3 cut(s)	255, 594, 896
Sse9I	AATT	6 cut(s)	118, 133, 550, 609, 943, 1156
SsiI	CCGC	2 cut(s)	147, 649
SspMI	CTAG	5 cut(s)	263, 401, 863, 954, 1011
SstI	GAGCTC	1 cut(s)	870
StyD4I	CCNGG	2 cut(s)	455, 488
TaaI	ACNGT	2 cut(s)	349, 997
TaiI	ACGT	3 cut(s)	338, 368, 521
TaqI	TCGA	3 cut(s)	131, 296, 743
TasI	AATT	6 cut(s)	118, 133, 550, 609, 943, 1156
TfiI	GAWTC	2 cut(s)	384, 470
Tru1I	TTAA	4 cut(s)	83, 666, 897, 1154
Tru9I	TTAA	4 cut(s)	83, 666, 897, 1154
TscAI	CASTG	3 cut(s)	352, 385, 684
TseFI	GTSAC	4 cut(s)	26, 376, 997, 1139
TseI	GCWGC	3 cut(s)	158, 557, 1064
Tsp45I	GTSAC	4 cut(s)	26, 376, 997, 1139
TspDTI	ATGAA	3 cut(s)	265, 437, 1118
TspGWI	ACGGA	1 cut(s)	474
TspRI	CASTG	3 cut(s)	352, 385, 684
Vha464I	CTTAAG	1 cut(s)	896
VpaK11BI	GGWCC	1 cut(s)	179
XapI	RAATTY	1 cut(s)	133
XceI	RCATGY	2 cut(s)	784, 918
XmiI	GTMKAC	1 cut(s)	768
XmnI	GAANNNNTTC	1 cut(s)	428
XspI	CTAG	5 cut(s)	263, 401, 863, 954, 1011

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.