Prupe.2G184700_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0017711
Physical Location & Seq
Forward (+)
22617256 .. 22618883
1628 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G184700.1

Sequence Viewer

Length: 1437 bp
ATGGAAGAAAACAAATACACAACACCTCATGTAGTCATGGTACCAAGTCCAGGCATGGGTCACCTTATCCCACTGGTTGAGCTAGCCAAGCTCTTTGTCCACCACCACAACTTCACCGTCACATTTATAATCCCAACAATTGGGTCTCATCTACCCAAACCCCAAATTTCCATTCTTCAGAGCCTACCTCCACAATCCACAACCTATTTCTTTCTCCCTCCAATTTCCTTTGATTACCTACCACAAGAAACCAAAGCAGAAACAAAAATAACCCTAGCTGTCACACGCTCGATTTCTTCGATTCGTGACGTGTTCCAGTCCTTAGCTGAAAATGCCAACTTGGTAGCATTGGTGGTTGATATTTTTGGCACGGACGCTTTTGATGTTGCACATCAGTTCAATGTGCCACCTTACTTATATTTTCCCTCGATGACTATGGGGTTAATTTTGTTACTTTATATGCCTAAGCTTGACAGCTTGGTCTCATCTGAATACAGAGACTTGGCTGAACCAGTGAAGTTACCTGGGTGCACACCAATTTGTGGTAGAGATTTTCCAGAGCCATTTCAGGACCGAAGAGATGAAGCATACAAATTGTTTCTTCACCATGGGAAAAGGGTTGGTTTGGCTGAGGGAATTATACTGAATAGCTTCATGGAATTGGAGCCAGATCCTATAAAGGCTTTGCAAGATGATACTGAGCTTTGTAGGCCACCGGTTTACCCAATTGGACCGCTTATACAGACCGGTTCATGTGGTTGGGCGGAACCGGCTGGTGGGTTAGAGTATTTAAGATGGTTGGATGATCAGCCGACTGGGTCTGTTTTGTTTGTGTCATTTGGGAGTGGAGGTACTCTCTCTTCTGAACAGCTCACTGAATTGGCATTAGGTCTTGAAATGAGTGGAACTAAATTTTTATGGGTCGTGAGAAGCCCAAATAACAAAGCTTCAAATGCATCATTTTTTAGTGTCCATAGCCAAACAGACCCTTTGGGGTGCCTCCCATATGGGTTTGTGGAGAGGACCAAAAGGCAAGGTCTTTCGGTGCCATCATGGGCACCACAAACTGAGGTCCTTGGCCACGGCTCAGTTGGTGGGTTTTTAAGTCACTGTGGATGGAATTCAATCCTTGAGAGCATTGTGAATGGTGTGCCTCTGATTGCTTGGCCTTTGTATGCAGAGCAGAAAATGAATGCAATTGTGTTGACTGAGGTTTTAAAAGTGGCATTGAGGCCCAAAGCTGATGAAAATGGCATCGTGGGAAGGGAGGAGATTGCCAGGGTTGTGAAGGAACTAATGGAAGGGGAAGAAGGGTTTAGGGTTCGTGATCAAATGAATTATTGGAAGGAAGCTGCTGTGAAGGCAAAGAGTGAAGAGGGTTCTTCTACAAAGTCACTATCTGAGTTAGTGATCAAGTGGAAGAAACACAAGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

479

Amino Acids

53.04

Weight (kDa)

5.76

Isoelectric Point (pI)

51.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017711)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g16090
prunus_persica Prupe.2G184700_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0359041
rosa_laevigata RLG00000027906
rosa_multiflora Rmu_co8449533.1_g000001 Rmu_sc0001842.1_g000003
rosa_roxburghii Rroxscaffold_4G00297440
rosa_samantha Rh1AG280700 Rh1BG247700 Rh1CG264900 Rh1DG276000
rosa_wichuraiana Rw1G024960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 128
AasI GACNNNNNNGTC 1 cut(s) 479
Acc65I GGTACC 1 cut(s) 40
AccB1I GGYRCC 4 cut(s) 40, 996, 1045, 1057
AccB7I CCANNNNNTGG 2 cut(s) 140, 542
AciI CCGC 2 cut(s) 734, 764
AclWI GGATC 1 cut(s) 665
AcoI YGGCCR 1 cut(s) 1078
AcsI RAATTY 3 cut(s) 165, 911, 1120
AcuI CTGAAG 1 cut(s) 161
AfaI GTAC 2 cut(s) 42, 853
AfiI CCNNNNNNNGG 5 cut(s) 50, 56, 140, 542, 776
AflIII ACRYGT 1 cut(s) 309
AgeI ACCGGT 2 cut(s) 715, 746
AgsI TTSAA 4 cut(s) 400, 896, 951, 1125
AjiI CACGTC 1 cut(s) 310
AjnI CCWGG 3 cut(s) 49, 523, 1277
AjuI GAANNNNNNNTTGG 2 cut(s) 156, 188
Alw21I GWGCWC 1 cut(s) 533
Alw26I GTCTC 3 cut(s) 150, 487, 492
Alw44I GTGCAC 1 cut(s) 529
AlwI GGATC 1 cut(s) 665
AoxI GGCC 4 cut(s) 710, 1078, 1166, 1232
ApaLI GTGCAC 1 cut(s) 529
ApeKI GCWGC 1 cut(s) 1352
ApoI RAATTY 3 cut(s) 165, 911, 1120
AsiGI ACCGGT 2 cut(s) 715, 746
Asp700I GAANNNNTTC 1 cut(s) 650
Asp718I GGTACC 1 cut(s) 40
AspS9I GGNCC 5 cut(s) 571, 731, 1023, 1072, 1233
AsuHPI GGTGA 3 cut(s) 53, 106, 596
AsuNHI GCTAGC 1 cut(s) 82
AvaII GGWCC 4 cut(s) 571, 731, 1023, 1072
BaeGI GKGCMC 2 cut(s) 533, 1060
BalI TGGCCA 1 cut(s) 1080
BanI GGYRCC 4 cut(s) 40, 996, 1045, 1057
BarI GAAGNNNNNNTAC 2 cut(s) 844, 876
Bbv12I GWGCWC 1 cut(s) 533
BbvCI CCTCAGC 1 cut(s) 630
BbvI GCAGC 1 cut(s) 1339
BccI CCATC 3 cut(s) 789, 1057, 1110
BceAI ACGGC 1 cut(s) 1099
BciT130I CCWGG 3 cut(s) 51, 525, 1279
BclI TGATCA 3 cut(s) 805, 1327, 1410
BcoDI GTCTC 3 cut(s) 150, 487, 492
BfaI CTAG 2 cut(s) 83, 275
BisI GCNGC 1 cut(s) 1353
BlsI GCNGC 1 cut(s) 1354
Bme1390I CCNGG 3 cut(s) 51, 525, 1279
Bme18I GGWCC 4 cut(s) 571, 731, 1023, 1072
BmgBI CACGTC 1 cut(s) 310
BmgT120I GGNCC 5 cut(s) 571, 731, 1023, 1072, 1233
BmiI GGNNCC 6 cut(s) 42, 666, 768, 998, 1047, 1059
BmrFI CCNGG 3 cut(s) 51, 525, 1279
BmrI ACTGGG 1 cut(s) 825
BmsI GCATC 2 cut(s) 965, 1263
BmtI GCTAGC 1 cut(s) 86
BmuI ACTGGG 1 cut(s) 825
BplI GAGNNNNNCTC 4 cut(s) 172, 204, 840, 872
Bpu10I CCTNAGC 3 cut(s) 322, 465, 630
BpuEI CTTGAG 1 cut(s) 1151
BsaI GGTCTC 2 cut(s) 150, 487
BsaJI CCNNGG 5 cut(s) 524, 607, 1075, 1081, 1278
BsaWI WCCGGW 2 cut(s) 715, 746
BsaXI ACNNNNNCTCC 2 cut(s) 835, 865
Bsc4I CCNNNNNNNGG 5 cut(s) 50, 56, 140, 542, 776
Bse118I RCCGGY 3 cut(s) 715, 746, 769
Bse1I ACTGG 4 cut(s) 78, 316, 512, 820
BseBI CCWGG 3 cut(s) 51, 525, 1279
BseDI CCNNGG 5 cut(s) 524, 607, 1075, 1081, 1278
BseGI GGATG 2 cut(s) 808, 1121
BseLI CCNNNNNNNGG 5 cut(s) 50, 56, 140, 542, 776
BseMII CTCAG 6 cut(s) 621, 690, 1059, 1101, 1200, 1392
BseNI ACTGG 4 cut(s) 78, 316, 512, 820
BseRI GAGGAG 1 cut(s) 1283
BseSI GKGCMC 2 cut(s) 533, 1060
BseXI GCAGC 1 cut(s) 1339
BshFI GGCC 4 cut(s) 712, 1080, 1168, 1234
BshNI GGYRCC 4 cut(s) 40, 996, 1045, 1057
BshTI ACCGGT 2 cut(s) 715, 746
BsiHKAI GWGCWC 1 cut(s) 533
BsiSI CCGG 3 cut(s) 716, 747, 770
BslI CCNNNNNNNGG 5 cut(s) 50, 56, 140, 542, 776
BsmAI GTCTC 3 cut(s) 150, 487, 492
BsmI GAATGC 1 cut(s) 1198
BsnI GGCC 4 cut(s) 712, 1080, 1168, 1234
Bso31I GGTCTC 2 cut(s) 150, 487
Bsp1286I GDGCHC 2 cut(s) 533, 1060
Bsp143I GATC 4 cut(s) 670, 805, 1327, 1410
Bsp19I CCATGG 1 cut(s) 607
BspACI CCGC 2 cut(s) 734, 764
BspANI GGCC 4 cut(s) 712, 1080, 1168, 1234
BspCNI CTCAG 6 cut(s) 622, 691, 1060, 1100, 1201, 1393
BspLI GGNNCC 6 cut(s) 42, 666, 768, 998, 1047, 1059
BspOI GCTAGC 1 cut(s) 86
BspPI GGATC 1 cut(s) 665
BspT107I GGYRCC 4 cut(s) 40, 996, 1045, 1057
BspTNI GGTCTC 2 cut(s) 150, 487
BsrFI RCCGGY 3 cut(s) 715, 746, 769
BsrI ACTGG 4 cut(s) 78, 316, 512, 820
BssAI RCCGGY 3 cut(s) 715, 746, 769
BssECI CCNNGG 5 cut(s) 524, 607, 1075, 1081, 1278
BssMI GATC 4 cut(s) 670, 805, 1327, 1410
BssT1I CCWWGG 2 cut(s) 607, 1075
Bst2UI CCWGG 3 cut(s) 51, 525, 1279
Bst4CI ACNGT 2 cut(s) 118, 1112
Bst6I CTCTTC 3 cut(s) 571, 865, 1368
BstC8I GCNNGC 1 cut(s) 84
BstDEI CTNAG 8 cut(s) 322, 465, 630, 699, 1068, 1087, 1209, 1401
BstDSI CCRYGG 2 cut(s) 607, 1081
BstEII GGTNACC 1 cut(s) 59
BstF5I GGATG 2 cut(s) 808, 1121
BstKTI GATC 4 cut(s) 673, 808, 1330, 1413
BstMAI GTCTC 3 cut(s) 150, 487, 492
BstMBI GATC 4 cut(s) 670, 805, 1327, 1410
BstMWI GCNNNNNNNGC 6 cut(s) 88, 332, 709, 770, 953, 1361
BstNI CCWGG 3 cut(s) 51, 525, 1279
BstPI GGTNACC 1 cut(s) 59
BstSCI CCNGG 3 cut(s) 49, 523, 1277
BstSLI GKGCMC 2 cut(s) 533, 1060
BstV1I GCAGC 1 cut(s) 1339
BstX2I RGATCY 1 cut(s) 670
BstYI RGATCY 1 cut(s) 670
BsuRI GGCC 4 cut(s) 712, 1080, 1168, 1234
BtgI CCRYGG 2 cut(s) 607, 1081
BtrI CACGTC 1 cut(s) 310
BtsCI GGATG 2 cut(s) 808, 1121
BtsIMutI CAGTG 4 cut(s) 71, 519, 873, 1108
Cac8I GCNNGC 1 cut(s) 84
Cfr10I RCCGGY 3 cut(s) 715, 746, 769
Cfr13I GGNCC 5 cut(s) 571, 731, 1023, 1072, 1233
CseI GACGC 1 cut(s) 383
Csp6I GTAC 2 cut(s) 41, 852
CspAI ACCGGT 2 cut(s) 715, 746
CviAII CATG 7 cut(s) 29, 37, 55, 608, 655, 753, 1053
CviQI GTAC 2 cut(s) 41, 852
DdeI CTNAG 8 cut(s) 322, 465, 630, 699, 1068, 1087, 1209, 1401
DpnI GATC 4 cut(s) 672, 807, 1329, 1412
DpnII GATC 4 cut(s) 670, 805, 1327, 1410
DraI TTTAAA 1 cut(s) 1218
DrdI GACNNNNNNGTC 1 cut(s) 479
DseDI GACNNNNNNGTC 1 cut(s) 479
EaeI YGGCCR 1 cut(s) 1078
Eam1104I CTCTTC 3 cut(s) 571, 865, 1368
EarI CTCTTC 3 cut(s) 571, 865, 1368
EciI GGCGGA 1 cut(s) 779
Eco130I CCWWGG 2 cut(s) 607, 1075
Eco31I GGTCTC 2 cut(s) 150, 487
Eco47I GGWCC 4 cut(s) 571, 731, 1023, 1072
Eco57I CTGAAG 1 cut(s) 161
Eco91I GGTNACC 1 cut(s) 59
EcoO109I RGGNCCY 1 cut(s) 1072
EcoO65I GGTNACC 1 cut(s) 59
EcoRI GAATTC 1 cut(s) 1120
EcoRII CCWGG 3 cut(s) 49, 523, 1277
EcoT14I CCWWGG 2 cut(s) 607, 1075
EcoT22I ATGCAT 1 cut(s) 958
ErhI CCWWGG 2 cut(s) 607, 1075
FaeI CATG 7 cut(s) 32, 40, 58, 611, 658, 756, 1056
FatI CATG 7 cut(s) 28, 36, 54, 607, 654, 752, 1052
FauNDI CATATG 1 cut(s) 1006
FbaI TGATCA 3 cut(s) 805, 1327, 1410
Fnu4HI GCNGC 1 cut(s) 1353
FokI GGATG 2 cut(s) 815, 1128
Fsp4HI GCNGC 1 cut(s) 1353
FspBI CTAG 2 cut(s) 83, 275
GluI GCNGC 1 cut(s) 1353
HaeIII GGCC 4 cut(s) 712, 1080, 1168, 1234
HapII CCGG 3 cut(s) 716, 747, 770
HgaI GACGC 1 cut(s) 383
Hin1II CATG 7 cut(s) 32, 40, 58, 611, 658, 756, 1056
HincII GTYRAC 1 cut(s) 1206
HindII GTYRAC 1 cut(s) 1206
HindIII AAGCTT 2 cut(s) 467, 945
HinfI GANTC 1 cut(s) 301
HpaII CCGG 3 cut(s) 716, 747, 770
HphI GGTGA 3 cut(s) 53, 106, 596
Hpy166II GTNNAC 4 cut(s) 100, 531, 721, 1206
Hpy188I TCNGA 5 cut(s) 180, 490, 865, 1158, 1402
Hpy188III TCNNGA 6 cut(s) 305, 557, 569, 893, 925, 1325
Hpy8I GTNNAC 4 cut(s) 100, 531, 721, 1206
HpyAV CCTTC 6 cut(s) 1257, 1282, 1295, 1304, 1339, 1354
HpyCH4III ACNGT 2 cut(s) 118, 1112
HpyCH4IV ACGT 1 cut(s) 309
HpyCH4V TGCA 6 cut(s) 389, 531, 688, 956, 1178, 1196
HpyF10VI GCNNNNNNNGC 6 cut(s) 88, 332, 709, 770, 953, 1361
HpyF3I CTNAG 8 cut(s) 322, 465, 630, 699, 1068, 1087, 1209, 1401
HpySE526I ACGT 1 cut(s) 309
Hsp92II CATG 7 cut(s) 32, 40, 58, 611, 658, 756, 1056
KpnI GGTACC 1 cut(s) 44
Ksp22I TGATCA 3 cut(s) 805, 1327, 1410
Kzo9I GATC 4 cut(s) 670, 805, 1327, 1410
LmnI GCTCC 1 cut(s) 664
Lsp1109I GCAGC 1 cut(s) 1339
LweI GCATC 2 cut(s) 965, 1263
MaeI CTAG 2 cut(s) 83, 275
MaeII ACGT 1 cut(s) 309
MaeIII GTNAC 8 cut(s) 59, 118, 280, 305, 450, 519, 1106, 1392
MalI GATC 4 cut(s) 672, 807, 1329, 1412
MboI GATC 4 cut(s) 670, 805, 1327, 1410
MfeI CAATTG 3 cut(s) 138, 726, 1197
MflI RGATCY 1 cut(s) 670
MhlI GDGCHC 2 cut(s) 533, 1060
MlsI TGGCCA 1 cut(s) 1080
MluNI TGGCCA 1 cut(s) 1080
MmeI TCCRAC 1 cut(s) 780
Mox20I TGGCCA 1 cut(s) 1080
Mph1103I ATGCAT 1 cut(s) 958
MroXI GAANNNNTTC 1 cut(s) 650
MscI TGGCCA 1 cut(s) 1080
MseI TTAA 4 cut(s) 443, 791, 1103, 1217
Msp20I TGGCCA 1 cut(s) 1080
MspI CCGG 3 cut(s) 716, 747, 770
MspR9I CCNGG 3 cut(s) 51, 525, 1279
MunI CAATTG 3 cut(s) 138, 726, 1197
Mva1269I GAATGC 1 cut(s) 1198
MvaI CCWGG 3 cut(s) 51, 525, 1279
MwoI GCNNNNNNNGC 6 cut(s) 88, 332, 709, 770, 953, 1361
NcoI CCATGG 1 cut(s) 607
NdeI CATATG 1 cut(s) 1006
NdeII GATC 4 cut(s) 670, 805, 1327, 1410
NheI GCTAGC 1 cut(s) 82
NlaIII CATG 7 cut(s) 32, 40, 58, 611, 658, 756, 1056
NlaIV GGNNCC 6 cut(s) 42, 666, 768, 998, 1047, 1059
NmuCI GTSAC 6 cut(s) 59, 118, 280, 305, 1106, 1392
NsiI ATGCAT 1 cut(s) 958
PcsI WCGNNNNNNNCGW 1 cut(s) 296
PctI GAATGC 1 cut(s) 1198
PdmI GAANNNNTTC 1 cut(s) 650
PfeI GAWTC 1 cut(s) 301
PflFI GACNNNGTC 1 cut(s) 817
PflMI CCANNNNNTGG 2 cut(s) 140, 542
PinAI ACCGGT 2 cut(s) 715, 746
PkrI GCNGC 1 cut(s) 1354
PpuMI RGGWCCY 1 cut(s) 1072
PsiI TTATAA 1 cut(s) 128
Psp5II RGGWCCY 1 cut(s) 1072
Psp6I CCWGG 3 cut(s) 49, 523, 1277
PspEI GGTNACC 1 cut(s) 59
PspGI CCWGG 3 cut(s) 49, 523, 1277
PspN4I GGNNCC 6 cut(s) 42, 666, 768, 998, 1047, 1059
PspPI GGNCC 5 cut(s) 571, 731, 1023, 1072, 1233
PspPPI RGGWCCY 1 cut(s) 1072
PsuI RGATCY 1 cut(s) 670
PsyI GACNNNGTC 1 cut(s) 817
RsaI GTAC 2 cut(s) 42, 853
RsaNI GTAC 2 cut(s) 41, 852
SaqAI TTAA 4 cut(s) 443, 791, 1103, 1217
SatI GCNGC 1 cut(s) 1353
Sau3AI GATC 4 cut(s) 670, 805, 1327, 1410
Sau96I GGNCC 5 cut(s) 571, 731, 1023, 1072, 1233
ScrFI CCNGG 3 cut(s) 51, 525, 1279
SduI GDGCHC 2 cut(s) 533, 1060
SfaNI GCATC 2 cut(s) 965, 1263
SinI GGWCC 4 cut(s) 571, 731, 1023, 1072
SmlI CTYRAG 1 cut(s) 1130
SmoI CTYRAG 1 cut(s) 1130
SsiI CCGC 2 cut(s) 734, 764
SspMI CTAG 2 cut(s) 83, 275
StyD4I CCNGG 3 cut(s) 49, 523, 1277
StyI CCWWGG 2 cut(s) 607, 1075
TaaI ACNGT 2 cut(s) 118, 1112
TaiI ACGT 1 cut(s) 312
TaqI TCGA 3 cut(s) 290, 299, 428
TaqII GACCGA 1 cut(s) 588
TfiI GAWTC 1 cut(s) 301
Tru1I TTAA 4 cut(s) 443, 791, 1103, 1217
Tru9I TTAA 4 cut(s) 443, 791, 1103, 1217
TscAI CASTG 4 cut(s) 78, 519, 880, 1115
TseFI GTSAC 6 cut(s) 59, 118, 280, 305, 1106, 1392
TseI GCWGC 1 cut(s) 1352
Tsp45I GTSAC 6 cut(s) 59, 118, 280, 305, 1106, 1392
TspDTI ATGAA 6 cut(s) 597, 643, 741, 1205, 1260, 1349
TspGWI ACGGA 1 cut(s) 386
TspRI CASTG 4 cut(s) 78, 519, 880, 1115
Tth111I GACNNNGTC 1 cut(s) 817
Van91I CCANNNNNTGG 2 cut(s) 140, 542
VneI GTGCAC 1 cut(s) 529
VpaK11BI GGWCC 4 cut(s) 571, 731, 1023, 1072
XapI RAATTY 3 cut(s) 165, 911, 1120
XcmI CCANNNNNNNNNTGG 1 cut(s) 1088
XmnI GAANNNNTTC 1 cut(s) 650
XspI CTAG 2 cut(s) 83, 275
Zsp2I ATGCAT 1 cut(s) 958
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.