Prupe.2G191200_v2.0.a1

nephrocystin-3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0016392
Physical Location & Seq
Reverse (-)
23051433 .. 23054709
3277 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G191200.1

Sequence Viewer

Length: 1716 bp
ATGCCAGCCTTAGCCTCACCCAAAACACCATCCCAGACCATTTTCGTGCCCGACCCGACCCCTAAAATACAGCACTTCAATGGTACCAAAACCCCGTCACCTTCCACCTCACGAACGAAAGCCTCCAGAAAAACCCAACCCGTCGATGAGACTTCGCTCGACAACCCGGATCTAGGTCCGTTCTTGTTAAAGCTCGCCCGGGATACTTTCGGGTCGGGCGAGAGCCCAAACAAGGCGTTGGACTACGCCATTCGGGCTTCCAAATCATTCGAGAGGTGTTCGGGTCCGGGTCTGGACCTCGCTATGAGCTTGCACGTTGTGGCGGCGATATACTGTAGTTTGGGCAGGTTTGAGGAGGCTGTTCGGGTTTTGGAGCGGGCAATTGAAGTCTCGGATCCGGAAAACGGGCCGGACCATGCGCTGGCTAAGTTCTCAGGGTACATGCAGCTGGGTGACACGTGTTCGATGCTGGGACAGCTTGAGCAGTCCATTTTATGTTACGAGTCGGGTTTGAAGATCCAAAGGGAGACTCTGGGCGGGTCGGATCCGAGAGTTGCAGAGACTTGCAGGTACCTAGCAGAGGCCCATGTCCAAGTAATGCAATTTGATGAGGCAGAGAACTACTGCAAGAAGACTCTTGAAATTCGAAGGGAGCATAGCTCACCTGCGTCTGTCGAAGAGGCTGCTGACCGGCGTCTCATGGCTCTCATCTATGAGGCAAAGGGAGATTATGAATTGGCACTCGAGCACCTTGTTCTTGCAAGCATGATTATGATTGCCAATGGGCAAGACAATGAGGTTGCCGCTATCGACATGGGCATTGGTGACATTTACTTGTCTCTTTGCCGCTTTGATGAGGCGGTTTTTTCCTACCAGAAAGCACTTACGGTTCTCAAATCCACAAGGGGTGAAAACCACCCTTCTGTAGCATCAGTTTTTATTCGCCTGGCTGACTTGTATTACAAGACAGGCAAGCTAAGAGAGTCCAAATCCTACTGCGAGAACGCATTGAGGATATACGCGAAACCTTTGCCTGGAATCATATCTGAGGAAATTGCTAGCGGGTTGACAGAAATCTCAGCCATCTACGAAGCTGTCAATGAGCCTGAGGAGGCGCTAAATCTCTTGCAGAAGGCAATGAAGTTATTAGAGGACACCCCTGCACAGCGGAGCACTATTGCGGGAATAGAAGCGCAGATGGGTGTTATGTTCTATATGGTTGGGAGGTATGGGGAGGCCTGGAGGTCCTTTAAGAGTGCTATATCAAAGCTTCGGGCCAGCGGGGAGAGGAAATCAGCACATTTTGGTATTGTGCTGAACCAGATGGGATTGGCTAGTGTGCAGTTGTACAAATTAGATGAGGCTGCTCGGCTTTTTGAAGAAGCAAGGGAGATTCTGGAGCAGGAGTGTGGCCTTTGTCACGTGGATACTCTTGGAGTATATAGCAACCTTGCAGCAACTTATGATGCCATGGGAAGAGTAGAAGCTGCAATTGAGATGCTAGAGCACATTCTAAAGGTGAGGGAAGAGAAGCTTGGGACGGCACATCCAGATTTTGACGACGAGAAGAAAAGACTGGCTGATCTTTTGAAAGAAGCAGGAAGGGCTAGGAACAGAAAAGGAAAATCACTTGAGAATCTACTTGGTTCCAACTCCCACCAAAGGACGAAGAAGGAAGGAGTGAAGAGGTGGGCTGGCTTTGGACACAAAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001655 GO:0001822 GO:0001889 GO:0001894 GO:0001895 GO:0001947 GO:0002009 GO:0003007 GO:0003143 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003341 GO:0003351 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005929 GO:0006928 GO:0006996 GO:0007017 GO:0007018 GO:0007275 GO:0007368 GO:0007369 GO:0007389 GO:0007507 GO:0008150 GO:0009653 GO:0009790 GO:0009799 GO:0009855 GO:0009887 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0016043 GO:0022603 GO:0022607 GO:0023051 GO:0023057 GO:0030030 GO:0030031 GO:0030111 GO:0030178 GO:0030323 GO:0030324 GO:0031016 GO:0032501 GO:0032502 GO:0035050 GO:0035239 GO:0035295 GO:0035469 GO:0042592 GO:0042995 GO:0043226 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0044782 GO:0045494 GO:0045595 GO:0045596 GO:0045995 GO:0048496 GO:0048513 GO:0048519 GO:0048523 GO:0048562 GO:0048565 GO:0048568 GO:0048583 GO:0048585 GO:0048598 GO:0048729 GO:0048731 GO:0048732 GO:0048856 GO:0048871 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051239 GO:0051960 GO:0055123 GO:0060026 GO:0060027 GO:0060249 GO:0060271 GO:0060287 GO:0060429 GO:0060541 GO:0060562 GO:0060828 GO:0060993 GO:0061008 GO:0061371 GO:0065007 GO:0065008 GO:0070925 GO:0071840 GO:0071907 GO:0071908 GO:0071909 GO:0071910 GO:0072001 GO:0072189 GO:0072359 GO:0090090 GO:0090175 GO:0090178 GO:0120025 GO:0120031 GO:0120036 GO:1905276 GO:1905330 GO:2000026 GO:2000027 GO:2000050 GO:2000095 GO:2000167
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_10 TPR_12 TPR_7 TPR_8

Protein Analysis

572

Amino Acids

63.15

Weight (kDa)

5.92

Isoelectric Point (pI)

35.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016392)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g16910
malus_domestica MD01G1083900.v1.1 MD07G1152700.v1.1
prunus_persica Prupe.2G191200_v2.0.a1
pyrus_communis pycom07g15090
rosa_chinensis RchiOBHm_Chr1g0360141
rosa_laevigata RLG00000027827
rosa_multiflora Rmu_sc0007813.1_g000005 Rmu_ssc0000368.1_g000043
rosa_roxburghii Rroxscaffold_4G00296350
rosa_rugosa Rorug01G0275300
rosa_samantha Rh1AG289100 Rh1BG254800 Rh1DG284200
rosa_wichuraiana Rw1G025650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 673
Acc36I ACCTGC 3 cut(s) 336, 558, 673
Acc65I GGTACC 2 cut(s) 83, 570
AccB1I GGYRCC 2 cut(s) 83, 570
AccB7I CCANNNNNTGG 1 cut(s) 421
AccBSI CCGCTC 1 cut(s) 376
AccII CGCG 1 cut(s) 1022
AccIII TCCGGA 1 cut(s) 397
AclWI GGATC 6 cut(s) 177, 389, 402, 511, 539, 552
AcsI RAATTY 1 cut(s) 642
AcvI CACGTG 2 cut(s) 459, 1423
AcyI GRCGYC 1 cut(s) 694
AdeI CACNNNGTG 1 cut(s) 319
AfaI GTAC 4 cut(s) 85, 440, 572, 1349
AfiI CCNNNNNNNGG 7 cut(s) 173, 232, 404, 421, 580, 1034, 1662
AflIII ACRYGT 2 cut(s) 456, 458
AgsI TTSAA 6 cut(s) 79, 386, 514, 641, 1379, 1591
AjnI CCWGG 3 cut(s) 945, 1033, 1238
AjuI GAANNNNNNNTTGG 2 cut(s) 1518, 1550
Alw21I GWGCWC 3 cut(s) 750, 1175, 1509
Alw26I GTCTC 6 cut(s) 143, 394, 521, 554, 701, 843
AlwI GGATC 6 cut(s) 177, 389, 402, 511, 539, 552
Ama87I CYCGRG 2 cut(s) 198, 743
Aor13HI TCCGGA 1 cut(s) 397
AoxI GGCC 5 cut(s) 407, 582, 1236, 1275, 1411
ApeKI GCWGC 5 cut(s) 445, 683, 1364, 1454, 1487
ApoI RAATTY 1 cut(s) 642
Asp718I GGTACC 2 cut(s) 83, 570
AspLEI GCGC 3 cut(s) 421, 1117, 1195
AspS9I GGNCC 8 cut(s) 176, 284, 295, 407, 412, 583, 1245, 1275
AsuC2I CCSGG 4 cut(s) 167, 199, 200, 288
AsuHPI GGTGA 7 cut(s) 9, 90, 464, 654, 836, 920, 1531
AsuII TTCGAA 1 cut(s) 646
AsuNHI GCTAGC 1 cut(s) 1058
AvaI CYCGRG 2 cut(s) 198, 743
AvaII GGWCC 5 cut(s) 176, 284, 295, 412, 1245
AxyI CCTNAGG 1 cut(s) 1107
BaeGI GKGCMC 1 cut(s) 51
BamHI GGATCC 2 cut(s) 394, 544
BanI GGYRCC 2 cut(s) 83, 570
BanII GRGCYC 1 cut(s) 227
BbrPI CACGTG 2 cut(s) 459, 1423
BbsI GAAGAC 1 cut(s) 638
Bbv12I GWGCWC 3 cut(s) 750, 1175, 1509
BbvI GCAGC 5 cut(s) 457, 670, 1351, 1466, 1474
BccI CCATC 4 cut(s) 37, 1091, 1192, 1318
BceAI ACGGC 1 cut(s) 1557
BcgI CGANNNNNNTGC 4 cut(s) 665, 699, 1012, 1046
BciT130I CCWGG 3 cut(s) 947, 1035, 1240
BciVI GTATCC 2 cut(s) 196, 1420
BcnI CCSGG 4 cut(s) 167, 199, 200, 288
BcoDI GTCTC 6 cut(s) 143, 394, 521, 554, 701, 843
BfaI CTAG 6 cut(s) 173, 575, 1059, 1335, 1502, 1608
BfmI CTRYAG 2 cut(s) 334, 924
BfoI RGCGCY 1 cut(s) 1118
BfuAI ACCTGC 3 cut(s) 336, 558, 673
BfuI GTATCC 2 cut(s) 196, 1420
BglI GCCNNNNNGGC 1 cut(s) 254
BisI GCNGC 8 cut(s) 324, 446, 684, 804, 847, 1365, 1455, 1488
BlsI GCNGC 8 cut(s) 325, 447, 685, 805, 848, 1366, 1456, 1489
Bme1390I CCNGG 7 cut(s) 167, 199, 200, 288, 947, 1035, 1240
Bme18I GGWCC 5 cut(s) 176, 284, 295, 412, 1245
BmeT110I CYCGRG 2 cut(s) 198, 743
BmgT120I GGNCC 8 cut(s) 176, 284, 295, 407, 412, 583, 1245, 1275
BmiI GGNNCC 6 cut(s) 85, 285, 396, 546, 572, 1648
BmrFI CCNGG 7 cut(s) 167, 199, 200, 288, 947, 1035, 1240
BmsI GCATC 4 cut(s) 456, 938, 1456, 1488
BmtI GCTAGC 1 cut(s) 1062
BoxI GACNNNNGTC 1 cut(s) 693
BpiI GAAGAC 1 cut(s) 638
BplI GAGNNNNNCTC 2 cut(s) 644, 676
BpmI CTGGAG 3 cut(s) 109, 1261, 1418
Bpu10I CCTNAGC 1 cut(s) 10
Bpu14I TTCGAA 1 cut(s) 646
BpuEI CTTGAG 2 cut(s) 500, 1652
BpuMI CCSGG 4 cut(s) 167, 199, 200, 288
BsaAI YACGTR 2 cut(s) 459, 1423
BsaHI GRCGYC 1 cut(s) 694
BsaJI CCNNGG 2 cut(s) 198, 1470
BsaWI WCCGGW 1 cut(s) 397
BsaXI ACNNNNNCTCC 2 cut(s) 1391, 1421
Bsc4I CCNNNNNNNGG 7 cut(s) 173, 232, 404, 421, 580, 1034, 1662
Bse118I RCCGGY 1 cut(s) 690
Bse1I ACTGG 1 cut(s) 1581
Bse21I CCTNAGG 1 cut(s) 1107
Bse3DI GCAATG 1 cut(s) 1143
BseAI TCCGGA 1 cut(s) 397
BseBI CCWGG 3 cut(s) 947, 1035, 1240
BseDI CCNNGG 2 cut(s) 198, 1470
BseGI GGATG 2 cut(s) 29, 1546
BseLI CCNNNNNNNGG 7 cut(s) 173, 232, 404, 421, 580, 1034, 1662
BseMI GCAATG 1 cut(s) 1143
BseMII CTCAG 4 cut(s) 447, 1038, 1092, 1098
BseNI ACTGG 1 cut(s) 1581
BseRI GAGGAG 2 cut(s) 368, 1124
BseSI GKGCMC 1 cut(s) 51
BseXI GCAGC 5 cut(s) 457, 670, 1351, 1466, 1474
BseYI CCCAGC 2 cut(s) 448, 469
BsgI GTGCAG 2 cut(s) 1146, 1361
Bsh1236I CGCG 1 cut(s) 1022
BshFI GGCC 5 cut(s) 409, 584, 1238, 1277, 1413
BshNI GGYRCC 2 cut(s) 83, 570
BsiHKAI GWGCWC 3 cut(s) 750, 1175, 1509
BsiHKCI CYCGRG 2 cut(s) 198, 743
BsiSI CCGG 6 cut(s) 167, 199, 287, 398, 410, 691
BslFI GGGAC 2 cut(s) 486, 1552
BslI CCNNNNNNNGG 7 cut(s) 173, 232, 404, 421, 580, 1034, 1662
BsmAI GTCTC 6 cut(s) 143, 394, 521, 554, 701, 843
BsmBI CGTCTC 1 cut(s) 701
BsmFI GGGAC 2 cut(s) 486, 1552
BsnI GGCC 5 cut(s) 409, 584, 1238, 1277, 1413
BsoBI CYCGRG 2 cut(s) 198, 743
Bsp119I TTCGAA 1 cut(s) 646
Bsp1286I GDGCHC 5 cut(s) 51, 227, 750, 1175, 1509
Bsp13I TCCGGA 1 cut(s) 397
Bsp1407I TGTACA 1 cut(s) 1347
Bsp143I GATC 5 cut(s) 169, 394, 516, 544, 1582
Bsp19I CCATGG 1 cut(s) 1470
BspANI GGCC 5 cut(s) 409, 584, 1238, 1277, 1413
BspCNI CTCAG 4 cut(s) 446, 1039, 1091, 1099
BspEI TCCGGA 1 cut(s) 397
BspFNI CGCG 1 cut(s) 1022
BspLI GGNNCC 6 cut(s) 85, 285, 396, 546, 572, 1648
BspMI ACCTGC 3 cut(s) 336, 558, 673
BspOI GCTAGC 1 cut(s) 1062
BspPI GGATC 6 cut(s) 177, 389, 402, 511, 539, 552
BspT104I TTCGAA 1 cut(s) 646
BspT107I GGYRCC 2 cut(s) 83, 570
BsrBI CCGCTC 1 cut(s) 376
BsrDI GCAATG 1 cut(s) 1143
BsrFI RCCGGY 1 cut(s) 690
BsrGI TGTACA 1 cut(s) 1347
BsrI ACTGG 1 cut(s) 1581
BssAI RCCGGY 1 cut(s) 690
BssECI CCNNGG 2 cut(s) 198, 1470
BssMI GATC 5 cut(s) 169, 394, 516, 544, 1582
BssNI GRCGYC 1 cut(s) 694
BssT1I CCWWGG 1 cut(s) 1470
Bst2UI CCWGG 3 cut(s) 947, 1035, 1240
Bst4CI ACNGT 2 cut(s) 335, 889
Bst6I CTCTTC 4 cut(s) 672, 1471, 1521, 1679
BstACI GRCGYC 1 cut(s) 694
BstAUI TGTACA 1 cut(s) 1347
BstBAI YACGTR 2 cut(s) 459, 1423
BstBI TTCGAA 1 cut(s) 646
BstDEI CTNAG 7 cut(s) 10, 426, 433, 977, 1047, 1078, 1107
BstDSI CCRYGG 1 cut(s) 1470
BstENI CCTNNNNNAGG 1 cut(s) 578
BstF5I GGATG 2 cut(s) 29, 1546
BstFNI CGCG 1 cut(s) 1022
BstH2I RGCGCY 1 cut(s) 1118
BstHHI GCGC 3 cut(s) 421, 1117, 1195
BstKTI GATC 5 cut(s) 172, 397, 519, 547, 1585
BstMAI GTCTC 6 cut(s) 143, 394, 521, 554, 701, 843
BstMBI GATC 5 cut(s) 169, 394, 516, 544, 1582
BstMWI GCNNNNNNNGC 3 cut(s) 254, 475, 1604
BstNI CCWGG 3 cut(s) 947, 1035, 1240
BstNSI RCATGY 1 cut(s) 445
BstPAI GACNNNNGTC 1 cut(s) 693
BstSCI CCNGG 7 cut(s) 165, 197, 198, 286, 945, 1033, 1238
BstSFI CTRYAG 2 cut(s) 334, 924
BstSLI GKGCMC 1 cut(s) 51
BstUI CGCG 1 cut(s) 1022
BstV1I GCAGC 5 cut(s) 457, 670, 1351, 1466, 1474
BstV2I GAAGAC 1 cut(s) 638
BstX2I RGATCY 4 cut(s) 169, 394, 516, 544
BstYI RGATCY 4 cut(s) 169, 394, 516, 544
Bsu36I CCTNAGG 1 cut(s) 1107
BsuI GTATCC 2 cut(s) 196, 1420
BsuRI GGCC 5 cut(s) 409, 584, 1238, 1277, 1413
BtgI CCRYGG 1 cut(s) 1470
BtsCI GGATG 2 cut(s) 29, 1546
BveI ACCTGC 3 cut(s) 336, 558, 673
CfoI GCGC 3 cut(s) 421, 1117, 1195
Cfr10I RCCGGY 1 cut(s) 690
Cfr13I GGNCC 8 cut(s) 176, 284, 295, 407, 412, 583, 1245, 1275
Cfr9I CCCGGG 1 cut(s) 198
CseI GACGC 2 cut(s) 657, 683
Csp6I GTAC 4 cut(s) 84, 439, 571, 1348
CviAII CATG 7 cut(s) 416, 442, 587, 700, 766, 814, 1471
CviQI GTAC 4 cut(s) 84, 439, 571, 1348
DdeI CTNAG 7 cut(s) 10, 426, 433, 977, 1047, 1078, 1107
DpnI GATC 5 cut(s) 171, 396, 518, 546, 1584
DpnII GATC 5 cut(s) 169, 394, 516, 544, 1582
DraIII CACNNNGTG 1 cut(s) 319
Eam1104I CTCTTC 4 cut(s) 672, 1471, 1521, 1679
EarI CTCTTC 4 cut(s) 672, 1471, 1521, 1679
Eco130I CCWWGG 1 cut(s) 1470
Eco147I AGGCCT 1 cut(s) 1238
Eco24I GRGCYC 1 cut(s) 227
Eco47I GGWCC 5 cut(s) 176, 284, 295, 412, 1245
Eco72I CACGTG 2 cut(s) 459, 1423
Eco81I CCTNAGG 1 cut(s) 1107
Eco88I CYCGRG 2 cut(s) 198, 743
EcoNI CCTNNNNNAGG 1 cut(s) 578
EcoO109I RGGNCCY 1 cut(s) 1245
EcoRII CCWGG 3 cut(s) 945, 1033, 1238
EcoT14I CCWWGG 1 cut(s) 1470
EcoT38I GRGCYC 1 cut(s) 227
ErhI CCWWGG 1 cut(s) 1470
Esp3I CGTCTC 1 cut(s) 701
FaeI CATG 7 cut(s) 419, 445, 590, 703, 769, 817, 1474
FalI AAGNNNNNCTT 2 cut(s) 1518, 1550
FaqI GGGAC 2 cut(s) 486, 1552
FatI CATG 7 cut(s) 415, 441, 586, 699, 765, 813, 1470
FauI CCCGC 5 cut(s) 369, 530, 1055, 1174, 1274
Fnu4HI GCNGC 8 cut(s) 324, 446, 684, 804, 847, 1365, 1455, 1488
FokI GGATG 2 cut(s) 16, 1533
FriOI GRGCYC 1 cut(s) 227
Fsp4HI GCNGC 8 cut(s) 324, 446, 684, 804, 847, 1365, 1455, 1488
FspBI CTAG 6 cut(s) 173, 575, 1059, 1335, 1502, 1608
GlaI GCGC 3 cut(s) 420, 1116, 1194
GluI GCNGC 8 cut(s) 324, 446, 684, 804, 847, 1365, 1455, 1488
GsaI CCCAGC 2 cut(s) 452, 473
GsuI CTGGAG 3 cut(s) 109, 1261, 1418
HaeII RGCGCY 1 cut(s) 1118
HaeIII GGCC 5 cut(s) 409, 584, 1238, 1277, 1413
HapII CCGG 6 cut(s) 167, 199, 287, 398, 410, 691
HgaI GACGC 2 cut(s) 657, 683
HhaI GCGC 3 cut(s) 421, 1117, 1195
Hin1I GRCGYC 1 cut(s) 694
Hin1II CATG 7 cut(s) 419, 445, 590, 703, 769, 817, 1474
Hin6I GCGC 3 cut(s) 419, 1115, 1193
HinP1I GCGC 3 cut(s) 419, 1115, 1193
HincII GTYRAC 1 cut(s) 1068
HindII GTYRAC 1 cut(s) 1068
HindIII AAGCTT 2 cut(s) 1268, 1532
HinfI GANTC 7 cut(s) 503, 529, 634, 983, 1038, 1393, 1636
HpaII CCGG 6 cut(s) 167, 199, 287, 398, 410, 691
HphI GGTGA 7 cut(s) 9, 90, 464, 654, 836, 920, 1531
Hpy166II GTNNAC 1 cut(s) 1068
Hpy188I TCNGA 4 cut(s) 394, 544, 549, 1048
Hpy188III TCNNGA 8 cut(s) 111, 126, 271, 293, 398, 638, 1397, 1550
Hpy8I GTNNAC 1 cut(s) 1068
Hpy99I CGWCG 2 cut(s) 146, 1565
HpyAV CCTTC 7 cut(s) 111, 642, 930, 1126, 1596, 1666, 1670
HpyCH4III ACNGT 2 cut(s) 335, 889
HpyCH4IV ACGT 3 cut(s) 315, 458, 1422
HpyF10VI GCNNNNNNNGC 3 cut(s) 254, 475, 1604
HpyF3I CTNAG 7 cut(s) 10, 426, 433, 977, 1047, 1078, 1107
HpySE526I ACGT 3 cut(s) 315, 458, 1422
Hsp92I GRCGYC 1 cut(s) 694
Hsp92II CATG 7 cut(s) 419, 445, 590, 703, 769, 817, 1474
HspAI GCGC 3 cut(s) 419, 1115, 1193
Kpn2I TCCGGA 1 cut(s) 397
KpnI GGTACC 2 cut(s) 87, 574
Kzo9I GATC 5 cut(s) 169, 394, 516, 544, 1582
LmnI GCTCC 4 cut(s) 373, 652, 1170, 1399
Lsp1109I GCAGC 5 cut(s) 457, 670, 1351, 1466, 1474
LweI GCATC 4 cut(s) 456, 938, 1456, 1488
MaeI CTAG 6 cut(s) 173, 575, 1059, 1335, 1502, 1608
MaeII ACGT 3 cut(s) 315, 458, 1422
MaeIII GTNAC 5 cut(s) 96, 452, 497, 824, 1418
MalI GATC 5 cut(s) 171, 396, 518, 546, 1584
MbiI CCGCTC 1 cut(s) 376
MboI GATC 5 cut(s) 169, 394, 516, 544, 1582
MboII GAAGA 9 cut(s) 526, 643, 689, 1391, 1488, 1538, 1579, 1681, 1696
MfeI CAATTG 2 cut(s) 381, 1491
MflI RGATCY 4 cut(s) 169, 394, 516, 544
MhlI GDGCHC 5 cut(s) 51, 227, 750, 1175, 1509
MluCI AATT 7 cut(s) 381, 602, 642, 734, 1053, 1352, 1491
MlyI GAGTC 4 cut(s) 512, 523, 628, 992
MmeI TCCRAC 3 cut(s) 219, 522, 1674
MroI TCCGGA 1 cut(s) 397
MseI TTAA 2 cut(s) 188, 1251
MslI CAYNNNNRTG 3 cut(s) 44, 78, 770
MspA1I CMGCKG 3 cut(s) 448, 1168, 1281
MspI CCGG 6 cut(s) 167, 199, 287, 398, 410, 691
MspR9I CCNGG 7 cut(s) 167, 199, 200, 288, 947, 1035, 1240
MunI CAATTG 2 cut(s) 381, 1491
MvaI CCWGG 3 cut(s) 947, 1035, 1240
MvnI CGCG 1 cut(s) 1022
MwoI GCNNNNNNNGC 3 cut(s) 254, 475, 1604
NciI CCSGG 4 cut(s) 167, 199, 200, 288
NcoI CCATGG 1 cut(s) 1470
NdeII GATC 5 cut(s) 169, 394, 516, 544, 1582
NheI GCTAGC 1 cut(s) 1058
NlaIII CATG 7 cut(s) 419, 445, 590, 703, 769, 817, 1474
NlaIV GGNNCC 6 cut(s) 85, 285, 396, 546, 572, 1648
NmeAIII GCCGAG 1 cut(s) 1348
NmuCI GTSAC 4 cut(s) 96, 452, 824, 1418
NspI RCATGY 1 cut(s) 445
NspV TTCGAA 1 cut(s) 646
PaeR7I CTCGAG 1 cut(s) 743
PaqCI CACCTGC 1 cut(s) 673
PceI AGGCCT 1 cut(s) 1238
PcsI WCGNNNNNNNCGW 1 cut(s) 216
PfeI GAWTC 3 cut(s) 1038, 1393, 1636
PflMI CCANNNNNTGG 1 cut(s) 421
PkrI GCNGC 8 cut(s) 325, 447, 685, 805, 848, 1366, 1456, 1489
PleI GAGTC 4 cut(s) 511, 523, 628, 991
PmaCI CACGTG 2 cut(s) 459, 1423
PmlI CACGTG 2 cut(s) 459, 1423
PpsI GAGTC 4 cut(s) 511, 523, 628, 991
Ppu21I YACGTR 2 cut(s) 459, 1423
PpuMI RGGWCCY 1 cut(s) 1245
PshAI GACNNNNGTC 1 cut(s) 693
Psp5II RGGWCCY 1 cut(s) 1245
Psp6I CCWGG 3 cut(s) 945, 1033, 1238
PspCI CACGTG 2 cut(s) 459, 1423
PspFI CCCAGC 2 cut(s) 448, 469
PspGI CCWGG 3 cut(s) 945, 1033, 1238
PspN4I GGNNCC 6 cut(s) 85, 285, 396, 546, 572, 1648
PspPI GGNCC 8 cut(s) 176, 284, 295, 407, 412, 583, 1245, 1275
PspPPI RGGWCCY 1 cut(s) 1245
PspXI VCTCGAGB 1 cut(s) 743
PsuI RGATCY 4 cut(s) 169, 394, 516, 544
PvuII CAGCTG 1 cut(s) 448
RsaI GTAC 4 cut(s) 85, 440, 572, 1349
RsaNI GTAC 4 cut(s) 84, 439, 571, 1348
RseI CAYNNNNRTG 3 cut(s) 44, 78, 770
SaqAI TTAA 2 cut(s) 188, 1251
SatI GCNGC 8 cut(s) 324, 446, 684, 804, 847, 1365, 1455, 1488
Sau3AI GATC 5 cut(s) 169, 394, 516, 544, 1582
Sau96I GGNCC 8 cut(s) 176, 284, 295, 407, 412, 583, 1245, 1275
SchI GAGTC 4 cut(s) 512, 523, 628, 992
ScrFI CCNGG 7 cut(s) 167, 199, 200, 288, 947, 1035, 1240
SduI GDGCHC 5 cut(s) 51, 227, 750, 1175, 1509
SfaNI GCATC 4 cut(s) 456, 938, 1456, 1488
SfcI CTRYAG 2 cut(s) 334, 924
Sfr274I CTCGAG 1 cut(s) 743
SfuI TTCGAA 1 cut(s) 646
SinI GGWCC 5 cut(s) 176, 284, 295, 412, 1245
SlaI CTCGAG 1 cut(s) 743
SmaI CCCGGG 1 cut(s) 200
SmiMI CAYNNNNRTG 3 cut(s) 44, 78, 770
SmlI CTYRAG 3 cut(s) 479, 743, 1631
SmoI CTYRAG 3 cut(s) 479, 743, 1631
Sse9I AATT 7 cut(s) 381, 602, 642, 734, 1053, 1352, 1491
SseBI AGGCCT 1 cut(s) 1238
SspMI CTAG 6 cut(s) 173, 575, 1059, 1335, 1502, 1608
StuI AGGCCT 1 cut(s) 1238
StyD4I CCNGG 7 cut(s) 165, 197, 198, 286, 945, 1033, 1238
StyI CCWWGG 1 cut(s) 1470
TaaI ACNGT 2 cut(s) 335, 889
TaiI ACGT 3 cut(s) 318, 461, 1425
TaqI TCGA 8 cut(s) 144, 159, 270, 464, 646, 675, 744, 810
TasI AATT 7 cut(s) 381, 602, 642, 734, 1053, 1352, 1491
TatI WGTACW 1 cut(s) 1347
TauI GCSGC 3 cut(s) 326, 806, 849
TfiI GAWTC 3 cut(s) 1038, 1393, 1636
Tru1I TTAA 2 cut(s) 188, 1251
Tru9I TTAA 2 cut(s) 188, 1251
TseFI GTSAC 4 cut(s) 96, 452, 824, 1418
TseI GCWGC 5 cut(s) 445, 683, 1364, 1454, 1487
Tsp45I GTSAC 4 cut(s) 96, 452, 824, 1418
TspDTI ATGAA 2 cut(s) 747, 1154
TspGWI ACGGA 1 cut(s) 168
TspMI CCCGGG 1 cut(s) 198
Van91I CCANNNNNTGG 1 cut(s) 421
VpaK11BI GGWCC 5 cut(s) 176, 284, 295, 412, 1245
XagI CCTNNNNNAGG 1 cut(s) 578
XapI RAATTY 1 cut(s) 642
XceI RCATGY 1 cut(s) 445
XhoI CTCGAG 1 cut(s) 743
XmaI CCCGGG 1 cut(s) 198
XspI CTAG 6 cut(s) 173, 575, 1059, 1335, 1502, 1608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.