Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0003397

Physical Location & Seq

Genomic Coordinates Reverse (-)

38735064 .. 38818634

Gene Structure 83571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0275300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGACCACCTTACCACTAATTGCTGGAAACTGTGGAAGAGGAAAAGGAAGTGAAGATCGTGGATTTGAATTGCTCTATCGATTTTCAGGAAGGAATCCTCTCACTAGTGAGTTGCTTGGAAGCTCATTTACAAGGGCAAATCGAATATGGTCCAAGGAACTCTATAGGAACAGAAGTTGGAACAAGTTCAGTATTTTTGCAAAAATTAAAAAGGGGAAGAAGTATGATTATCCATGGCCTGATGACATGGATCCAAACATCAGCAGTGGACACTTGAGTTACCTCTCTCATTTTAAGCCACTGACTGAGAAACCAAAGCCAGTTACACTTCCATTTGAGAAGCCACTTGTTGATCTTGAGAAAAAGATCACTGAGATACGTAGAATGGCTGATGAAACTGGTCTAGACTTCAGCAATCAAATTGTTCAACTGGAGAACAAGTATCAACAGGCCCTGAAAGACTTGTACAAACATTTGACACCAATCCAACGTCTATCTATTGCTCGACATCCCAACAGACCAACAGTTCTTGATCATATTTTAAATATTACAGAGAAGTGGGTGGAACTCCATGGAGATCGTGCAGGCTATGATGATCCAGCTATAGTTACTGGTCTTGGGAGCATAGATGGCAAAACCTACATGTTTATAGGTCATCAGAAAGGTAGGAACACAAAGGAGAATATTGTTCGAAACTTTGCAATGCCAACTCCACACGGGTACCGGAAGGCACTGAGAATGATGAAATATGCTGATCATCATAAATTTCCCGTTGTTACATTTGTTGACACTCCTGGGGCTTTTGCTGATCTCAAATCTGAGGAACTTGGCCAAGGTGAAGCAATAGCCCATAATCTTAGGGCTATGTTTGGCCTGAAAGTTCCGGTTGTAACAGTCGTAACTGGTGAAGGCGGTTCAGGTGGGGCTCTAGCCATTGGTTGTGCCAATAAAATGTTTATGCTGGAGAATTCTGCTTTCTATGTTGCAAGTCCTGAAGCATGTGCTGCAATACTGTGGAAATCTTCCCAAGCAGCTCCTAAGGCGGCTGAAAAACTAAGGATAACAGCTCAAGAGCATTACAGATTGAAAATTGCTGATGGTATCATCCCTGAGCCTCTTGGTGGTGCACATGCTGATCCTGCATGGACTTCCCAACAAATCAAGAATACAATTGTCGAGTCAATAAAGGAATTGGAAAACATGAACACAGAAGAGTTACTTCAGCACCGAAGACTTAAGTTCCGGTCAATTGGAGGGTTTCAAGAAGGCATTCCAGTGGAGCCTAATAGGAAACGTAACATGAAGCCATCTGAGGTTAACATGCCAAAGGCTGCTGAAATAGAGTCCGAGATTGAGATTTTAAAGAAGAAGATCCTAGAAGCAAAGGGACCATCTGATCCAATTACAAGCCAAGCAATTGAAAAACTCAAGCAAGATGTAGACAAGGAGATCACCAGTGCATTTATTTCAATGGGTTTGCAAGAGAAACTAGAATCAGTGAAGATGGAGTTATCTACAGCCTCCCAAGACACACCAAGTCAGCCCCTCAATCCTAGCTTGAAAGAGAAAGTGGACAAGATAATGCAGGAGTTTAACCACAACTTGTCGCGGCCGGGGGCATACCTTGGACTCAAACAGAAGCTTGAAAAACTAAACTTGGTTAATGGGATCATTGAGATGGAGGAGAGGAAGAAGAAACTGAAGGCTGAGATTAATCAGAAAATTCCAGCTGAGCTAAAAGCCAAGATGGAACTTCTGAAGAATGCTGAAGAAAAGATATCCAAAGGGGAAACACTGGATAAGGATTTGATTGAAGAAGTAGAGGGAGTTAAGAAAGAGCTTGTAGAAGTTTTAAAGGCAGCCAACTTAGAGGTTGTTGGGGTGGCCAAGAAAAATGTGATCACTGCCCCTCCAGAGTTGAAGGAAAAGATAGAGAAGGTAAATAAGGAGATATATGAGGAAATTGAGAGAGTTATAAATACAGATGGTATTAGTAGAAAAATAGAGGACTTGAAGGCGGATATAGAGAAAGGCTCAAGCTCAGAAGACAGAGAGAAAGCAGAAGCAAAGATAAAGGAGGAGATTCTTGCTACTTTGGATGTAGAAGCACTAAAACAGAAGGTTGAGAATTTGACAGTGGAGTTGGGTCTTCCCAAGGATAGTGTTACAGAAGACAAGGTTGGTGTTGAAAATGGCCGATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006873 GO:0006885 GO:0007035 GO:0008150 GO:0009987 GO:0016043 GO:0019725 GO:0022607 GO:0030003 GO:0030004 GO:0030641 GO:0032991 GO:0034622 GO:0042592 GO:0043291 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045851 GO:0048878 GO:0050801 GO:0051452 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0065003 GO:0065007 GO:0065008 GO:0070070 GO:0070071 GO:0070072 GO:0071840 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rav1p_C WD40

Protein Analysis

734

Amino Acids

82.38

Weight (kDa)

8.42

Isoelectric Point (pI)

42.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ACCA	PF03255	110 - 418	4.9e-130	Acetyl co-enzyme A carboxylase carboxyltransferase-like
Carboxyl_trans	PF01039	131 - 350	1.1e-10	Carboxyl transferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003397)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46560 AT2G46560 AT2G46560
fragaria_vesca	FvH4_7g16880 FvH4_7g16880 FvH4_7g16880 FvH4_7g16880
malus_domestica	MD01G1083800.v1.1
prunus_persica	Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0360111
rosa_laevigata	RLG00000018213 RLG00000027832
rosa_multiflora	Rmu_co8378581.1_g000001 Rmu_co8408019.1_g000001 Rmu_sc0007813.1_g000007 Rmu_ssc0000368.1_g000041
rosa_roxburghii	Rroxscaffold_4G00296380
rosa_rugosa	Rorug01G0275200 Rorug01G0275300
rosa_samantha	Rh1AG289000 Rh1BG254500 Rh1CG272000 Rh1DG283600
rosa_wichuraiana	Rw1G025630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1976
Acc65I	GGTACC	1 cut(s)	720
AccB1I	GGYRCC	1 cut(s)	720
AccI	GTMKAC	1 cut(s)	1440
AccII	CGCG	1 cut(s)	1609
AciI	CCGC	4 cut(s)	912, 1043, 1609, 2018
AclWI	GGATC	7 cut(s)	245, 258, 590, 1130, 1366, 1391, 1676
AcoI	YGGCCR	4 cut(s)	829, 1610, 1884, 2194
AcsI	RAATTY	4 cut(s)	764, 967, 1722, 2128
AcuI	CTGAAG	6 cut(s)	394, 1014, 1205, 1721, 1778, 1788
AfaI	GTAC	2 cut(s)	467, 722
AfiI	CCNNNNNNNGG	1 cut(s)	1121
AflII	CTTAAG	1 cut(s)	1235
AflIII	ACRYGT	1 cut(s)	642
AhlI	ACTAGT	1 cut(s)	104
AjnI	CCWGG	1 cut(s)	793
AjuI	GAANNNNNNNTTGG	2 cut(s)	2163, 2195
Alw21I	GWGCWC	1 cut(s)	1129
Alw44I	GTGCAC	1 cut(s)	1125
AlwI	GGATC	7 cut(s)	245, 258, 590, 1130, 1366, 1391, 1676
AlwNI	CAGNNNCTG	1 cut(s)	454
AoxI	GGCC	7 cut(s)	236, 450, 829, 871, 1610, 1884, 2194
ApaLI	GTGCAC	1 cut(s)	1125
ApeKI	GCWGC	4 cut(s)	1004, 1031, 1331, 1859
ApoI	RAATTY	4 cut(s)	764, 967, 1722, 2128
AseI	ATTAAT	1 cut(s)	1713
Asp700I	GAANNNNTTC	2 cut(s)	185, 1269
Asp718I	GGTACC	1 cut(s)	720
AspS9I	GGNCC	3 cut(s)	150, 451, 1388
AsuC2I	CCSGG	1 cut(s)	1614
AsuHPI	GGTGA	3 cut(s)	848, 917, 1444
AsuII	TTCGAA	1 cut(s)	691
AvaII	GGWCC	2 cut(s)	150, 1388
AxyI	CCTNAGG	1 cut(s)	1038
BaeGI	GKGCMC	1 cut(s)	1129
BaeI	ACNNNNGTAYC	2 cut(s)	704, 737
BalI	TGGCCA	2 cut(s)	831, 1886
BamHI	GGATCC	1 cut(s)	250
BanI	GGYRCC	1 cut(s)	720
BanII	GRGCYC	1 cut(s)	928
BarI	GAAGNNNNNNTAC	2 cut(s)	112, 144
BbsI	GAAGAC	4 cut(s)	1237, 2052, 2141, 2178
Bbv12I	GWGCWC	1 cut(s)	1129
BbvI	GCAGC	4 cut(s)	991, 1043, 1318, 1871
BccI	CCATC	8 cut(s)	623, 1091, 1315, 1399, 1498, 1672, 1741, 1979
BciT130I	CCWGG	1 cut(s)	795
BclI	TGATCA	3 cut(s)	532, 754, 1899
BcnI	CCSGG	1 cut(s)	1614
BcuI	ACTAGT	1 cut(s)	104
BfaI	CTAG	6 cut(s)	105, 404, 929, 1376, 1490, 1554
BfmI	CTRYAG	3 cut(s)	163, 603, 1515
BfrI	CTTAAG	1 cut(s)	1235
BisI	GCNGC	6 cut(s)	1005, 1032, 1044, 1332, 1610, 1860
BlpI	GCTNAGC	1 cut(s)	1731
BlsI	GCNGC	6 cut(s)	1006, 1033, 1045, 1333, 1611, 1861
Bme1390I	CCNGG	2 cut(s)	795, 1614
Bme18I	GGWCC	2 cut(s)	150, 1388
BmgT120I	GGNCC	3 cut(s)	150, 451, 1388
BmiI	GGNNCC	4 cut(s)	252, 722, 1281, 1389
BmrFI	CCNGG	2 cut(s)	795, 1614
BpiI	GAAGAC	4 cut(s)	1237, 2052, 2141, 2178
BplI	GAGNNNNNCTC	2 cut(s)	2018, 2050
BpmI	CTGGAG	3 cut(s)	452, 983, 1896
Bpu10I	CCTNAGC	1 cut(s)	1110
Bpu1102I	GCTNAGC	1 cut(s)	1731
Bpu14I	TTCGAA	1 cut(s)	691
BpuEI	CTTGAG	5 cut(s)	295, 377, 1053, 1412, 2020
BpuMI	CCSGG	1 cut(s)	1614
Bsa29I	ATCGAT	1 cut(s)	79
BsaAI	YACGTR	1 cut(s)	380
BsaJI	CCNNGG	8 cut(s)	153, 233, 571, 794, 832, 1613, 1624, 2154
BsaWI	WCCGGW	3 cut(s)	723, 883, 1242
BsaXI	ACNNNNNCTCC	4 cut(s)	425, 455, 1894, 1924
Bsc4I	CCNNNNNNNGG	1 cut(s)	1121
Bse1I	ACTGG	8 cut(s)	320, 403, 435, 616, 907, 1274, 1455, 1800
Bse21I	CCTNAGG	1 cut(s)	1038
Bse3DI	GCAATG	1 cut(s)	708
BseBI	CCWGG	1 cut(s)	795
BseCI	ATCGAT	1 cut(s)	79
BseDI	CCNNGG	8 cut(s)	153, 233, 571, 794, 832, 1613, 1624, 2154
BseGI	GGATG	3 cut(s)	508, 1104, 2104
BseLI	CCNNNNNNNGG	1 cut(s)	1121
BseMI	GCAATG	1 cut(s)	708
BseMII	CTCAG	9 cut(s)	297, 363, 725, 810, 1101, 1302, 1698, 1722, 2055
BseNI	ACTGG	8 cut(s)	320, 403, 435, 616, 907, 1274, 1455, 1800
BseRI	GAGGAG	2 cut(s)	1697, 2093
BseSI	GKGCMC	1 cut(s)	1129
BseX3I	CGGCCG	1 cut(s)	1610
BseXI	GCAGC	4 cut(s)	991, 1043, 1318, 1871
BsgI	GTGCAG	1 cut(s)	603
Bsh1236I	CGCG	1 cut(s)	1609
Bsh1285I	CGRYCG	1 cut(s)	1613
BshFI	GGCC	7 cut(s)	238, 452, 831, 873, 1612, 1886, 2196
BshNI	GGYRCC	1 cut(s)	720
BshVI	ATCGAT	1 cut(s)	79
BsiEI	CGRYCG	1 cut(s)	1613
BsiHKAI	GWGCWC	1 cut(s)	1129
BsiSI	CCGG	4 cut(s)	724, 884, 1243, 1613
BslFI	GGGAC	1 cut(s)	1401
BslI	CCNNNNNNNGG	1 cut(s)	1121
BsmFI	GGGAC	1 cut(s)	1401
BsmI	GAATGC	2 cut(s)	1269, 1768
BsnI	GGCC	7 cut(s)	238, 452, 831, 873, 1612, 1886, 2196
Bsp119I	TTCGAA	1 cut(s)	691
Bsp1286I	GDGCHC	2 cut(s)	928, 1129
Bsp1407I	TGTACA	1 cut(s)	465
Bsp1720I	GCTNAGC	1 cut(s)	1731
Bsp19I	CCATGG	2 cut(s)	233, 571
BspACI	CCGC	4 cut(s)	912, 1043, 1609, 2018
BspANI	GGCC	7 cut(s)	238, 452, 831, 873, 1612, 1886, 2196
BspCNI	CTCAG	9 cut(s)	298, 364, 726, 811, 1102, 1303, 1699, 1723, 2054
BspDI	ATCGAT	1 cut(s)	79
BspFNI	CGCG	1 cut(s)	1609
BspLI	GGNNCC	4 cut(s)	252, 722, 1281, 1389
BspPI	GGATC	7 cut(s)	245, 258, 590, 1130, 1366, 1391, 1676
BspT104I	TTCGAA	1 cut(s)	691
BspT107I	GGYRCC	1 cut(s)	720
BspTI	CTTAAG	1 cut(s)	1235
BsrDI	GCAATG	1 cut(s)	708
BsrGI	TGTACA	1 cut(s)	465
BsrI	ACTGG	8 cut(s)	320, 403, 435, 616, 907, 1274, 1455, 1800
BssECI	CCNNGG	8 cut(s)	153, 233, 571, 794, 832, 1613, 1624, 2154
BssT1I	CCWWGG	6 cut(s)	153, 233, 571, 832, 1624, 2154
Bst2UI	CCWGG	1 cut(s)	795
Bst4CI	ACNGT	5 cut(s)	32, 526, 895, 1014, 2137
Bst6I	CTCTTC	2 cut(s)	31, 1206
BstAFI	CTTAAG	1 cut(s)	1235
BstAPI	GCANNNNNTGC	1 cut(s)	1004
BstAUI	TGTACA	1 cut(s)	465
BstBAI	YACGTR	1 cut(s)	380
BstBI	TTCGAA	1 cut(s)	691
BstC8I	GCNNGC	1 cut(s)	586
BstDSI	CCRYGG	2 cut(s)	233, 571
BstF5I	GGATG	3 cut(s)	508, 1104, 2104
BstFNI	CGCG	1 cut(s)	1609
BstMCI	CGRYCG	1 cut(s)	1613
BstMWI	GCNNNNNNNGC	4 cut(s)	630, 1004, 1040, 1139
BstNI	CCWGG	1 cut(s)	795
BstNSI	RCATGY	4 cut(s)	646, 1002, 1133, 1324
BstSCI	CCNGG	2 cut(s)	793, 1612
BstSFI	CTRYAG	3 cut(s)	163, 603, 1515
BstSLI	GKGCMC	1 cut(s)	1129
BstSNI	TACGTA	1 cut(s)	380
BstUI	CGCG	1 cut(s)	1609
BstV1I	GCAGC	4 cut(s)	991, 1043, 1318, 1871
BstV2I	GAAGAC	4 cut(s)	1237, 2052, 2141, 2178
BstX2I	RGATCY	2 cut(s)	250, 1371
BstYI	RGATCY	2 cut(s)	250, 1371
BstZI	CGGCCG	1 cut(s)	1610
Bsu15I	ATCGAT	1 cut(s)	79
Bsu36I	CCTNAGG	1 cut(s)	1038
BsuRI	GGCC	7 cut(s)	238, 452, 831, 873, 1612, 1886, 2196
BsuTUI	ATCGAT	1 cut(s)	79
BtgI	CCRYGG	2 cut(s)	233, 571
BtsCI	GGATG	3 cut(s)	508, 1104, 2104
BtsI	GCAGTG	2 cut(s)	271, 1902
Cac8I	GCNNGC	1 cut(s)	586
CaiI	CAGNNNCTG	1 cut(s)	454
Cfr13I	GGNCC	3 cut(s)	150, 451, 1388
ClaI	ATCGAT	1 cut(s)	79
Csp6I	GTAC	2 cut(s)	466, 721
CviQI	GTAC	2 cut(s)	466, 721
DraI	TTTAAA	3 cut(s)	543, 1362, 1854
EaeI	YGGCCR	4 cut(s)	829, 1610, 1884, 2194
EagI	CGGCCG	1 cut(s)	1610
Eam1104I	CTCTTC	2 cut(s)	31, 1206
EarI	CTCTTC	2 cut(s)	31, 1206
EciI	GGCGGA	1 cut(s)	2033
EclXI	CGGCCG	1 cut(s)	1610
Eco105I	TACGTA	1 cut(s)	380
Eco130I	CCWWGG	6 cut(s)	153, 233, 571, 832, 1624, 2154
Eco24I	GRGCYC	1 cut(s)	928
Eco32I	GATATC	1 cut(s)	1779
Eco47I	GGWCC	2 cut(s)	150, 1388
Eco52I	CGGCCG	1 cut(s)	1610
Eco57I	CTGAAG	6 cut(s)	394, 1014, 1205, 1721, 1778, 1788
Eco81I	CCTNAGG	1 cut(s)	1038
EcoO109I	RGGNCCY	1 cut(s)	451
EcoRI	GAATTC	1 cut(s)	967
EcoRII	CCWGG	1 cut(s)	793
EcoRV	GATATC	1 cut(s)	1779
EcoT14I	CCWWGG	6 cut(s)	153, 233, 571, 832, 1624, 2154
EcoT38I	GRGCYC	1 cut(s)	928
ErhI	CCWWGG	6 cut(s)	153, 233, 571, 832, 1624, 2154
FalI	AAGNNNNNCTT	2 cut(s)	1203, 1235
FaqI	GGGAC	1 cut(s)	1401
FbaI	TGATCA	3 cut(s)	532, 754, 1899
FblI	GTMKAC	1 cut(s)	1440
Fnu4HI	GCNGC	6 cut(s)	1005, 1032, 1044, 1332, 1610, 1860
FokI	GGATG	3 cut(s)	495, 1091, 2111
FriOI	GRGCYC	1 cut(s)	928
Fsp4HI	GCNGC	6 cut(s)	1005, 1032, 1044, 1332, 1610, 1860
FspBI	CTAG	6 cut(s)	105, 404, 929, 1376, 1490, 1554
GluI	GCNGC	6 cut(s)	1005, 1032, 1044, 1332, 1610, 1860
GsuI	CTGGAG	3 cut(s)	452, 983, 1896
HaeIII	GGCC	7 cut(s)	238, 452, 831, 873, 1612, 1886, 2196
HapII	CCGG	4 cut(s)	724, 884, 1243, 1613
HincII	GTYRAC	2 cut(s)	787, 1318
HindII	GTYRAC	2 cut(s)	787, 1318
HindIII	AAGCTT	1 cut(s)	1640
HinfI	GANTC	6 cut(s)	94, 1178, 1343, 1493, 1629, 2083
HpaI	GTTAAC	1 cut(s)	1318
HpaII	CCGG	4 cut(s)	724, 884, 1243, 1613
HphI	GGTGA	3 cut(s)	848, 917, 1444
Hpy166II	GTNNAC	6 cut(s)	269, 787, 1127, 1318, 1441, 1573
Hpy188I	TCNGA	8 cut(s)	660, 820, 1312, 1348, 1396, 1719, 1758, 2044
Hpy188III	TCNNGA	9 cut(s)	87, 356, 404, 530, 992, 1070, 1162, 1262, 1913
Hpy8I	GTNNAC	6 cut(s)	269, 787, 1127, 1318, 1441, 1573
HpyAV	CCTTC	9 cut(s)	84, 721, 902, 1259, 1696, 1915, 1930, 2008, 2113
HpyCH4III	ACNGT	5 cut(s)	32, 526, 895, 1014, 2137
HpyCH4IV	ACGT	3 cut(s)	379, 490, 1294
HpyF10VI	GCNNNNNNNGC	4 cut(s)	630, 1004, 1040, 1139
HpySE526I	ACGT	3 cut(s)	379, 490, 1294
KpnI	GGTACC	1 cut(s)	724
Ksp22I	TGATCA	3 cut(s)	532, 754, 1899
KspAI	GTTAAC	1 cut(s)	1318
LmnI	GCTCC	3 cut(s)	621, 1039, 1279
Lsp1109I	GCAGC	4 cut(s)	991, 1043, 1318, 1871
MaeI	CTAG	6 cut(s)	105, 404, 929, 1376, 1490, 1554
MaeII	ACGT	3 cut(s)	379, 490, 1294
MaeIII	GTNAC	9 cut(s)	278, 322, 607, 775, 889, 898, 1215, 1295, 2164
MfeI	CAATTG	3 cut(s)	1170, 1248, 1416
MflI	RGATCY	2 cut(s)	250, 1371
MhlI	GDGCHC	2 cut(s)	928, 1129
MlsI	TGGCCA	2 cut(s)	831, 1886
MluNI	TGGCCA	2 cut(s)	831, 1886
MlyI	GAGTC	3 cut(s)	1187, 1352, 1623
MmeI	TCCRAC	2 cut(s)	158, 511
Mox20I	TGGCCA	2 cut(s)	831, 1886
MroXI	GAANNNNTTC	2 cut(s)	185, 1269
MscI	TGGCCA	2 cut(s)	831, 1886
MslI	CAYNNNNRTG	2 cut(s)	1274, 1676
Msp20I	TGGCCA	2 cut(s)	831, 1886
MspA1I	CMGCKG	1 cut(s)	1730
MspCI	CTTAAG	1 cut(s)	1235
MspI	CCGG	4 cut(s)	724, 884, 1243, 1613
MspR9I	CCNGG	2 cut(s)	795, 1614
MunI	CAATTG	3 cut(s)	1170, 1248, 1416
Mva1269I	GAATGC	2 cut(s)	1269, 1768
MvaI	CCWGG	1 cut(s)	795
MvnI	CGCG	1 cut(s)	1609
MwoI	GCNNNNNNNGC	4 cut(s)	630, 1004, 1040, 1139
NciI	CCSGG	1 cut(s)	1614
NcoI	CCATGG	2 cut(s)	233, 571
NlaIV	GGNNCC	4 cut(s)	252, 722, 1281, 1389
NspI	RCATGY	4 cut(s)	646, 1002, 1133, 1324
NspV	TTCGAA	1 cut(s)	691
PciI	ACATGT	1 cut(s)	642
PctI	GAATGC	2 cut(s)	1269, 1768
PdmI	GAANNNNTTC	2 cut(s)	185, 1269
PfeI	GAWTC	3 cut(s)	94, 1493, 2083
PkrI	GCNGC	6 cut(s)	1006, 1033, 1045, 1333, 1611, 1861
PleI	GAGTC	3 cut(s)	1186, 1351, 1623
PpsI	GAGTC	3 cut(s)	1186, 1351, 1623
Ppu21I	YACGTR	1 cut(s)	380
PscI	ACATGT	1 cut(s)	642
PshBI	ATTAAT	1 cut(s)	1713
PsiI	TTATAA	1 cut(s)	1976
Psp6I	CCWGG	1 cut(s)	793
PspGI	CCWGG	1 cut(s)	793
PspN4I	GGNNCC	4 cut(s)	252, 722, 1281, 1389
PspPI	GGNCC	3 cut(s)	150, 451, 1388
PstNI	CAGNNNCTG	1 cut(s)	454
PsuI	RGATCY	2 cut(s)	250, 1371
PvuII	CAGCTG	1 cut(s)	1730
RsaI	GTAC	2 cut(s)	467, 722
RsaNI	GTAC	2 cut(s)	466, 721
RseI	CAYNNNNRTG	2 cut(s)	1274, 1676
SatI	GCNGC	6 cut(s)	1005, 1032, 1044, 1332, 1610, 1860
Sau96I	GGNCC	3 cut(s)	150, 451, 1388
SchI	GAGTC	3 cut(s)	1187, 1352, 1623
ScrFI	CCNGG	2 cut(s)	795, 1614
SduI	GDGCHC	2 cut(s)	928, 1129
SfcI	CTRYAG	3 cut(s)	163, 603, 1515
SfuI	TTCGAA	1 cut(s)	691
SinI	GGWCC	2 cut(s)	150, 1388
SmiMI	CAYNNNNRTG	2 cut(s)	1274, 1676
SmlI	CTYRAG	6 cut(s)	274, 356, 1068, 1235, 1427, 2035
SmoI	CTYRAG	6 cut(s)	274, 356, 1068, 1235, 1427, 2035
SnaBI	TACGTA	1 cut(s)	380
SpeI	ACTAGT	1 cut(s)	104
SsiI	CCGC	4 cut(s)	912, 1043, 1609, 2018
SspI	AATATT	2 cut(s)	547, 685
SspMI	CTAG	6 cut(s)	105, 404, 929, 1376, 1490, 1554
StyD4I	CCNGG	2 cut(s)	793, 1612
StyI	CCWWGG	6 cut(s)	153, 233, 571, 832, 1624, 2154
TaaI	ACNGT	5 cut(s)	32, 526, 895, 1014, 2137
TaiI	ACGT	3 cut(s)	382, 493, 1297
TaqI	TCGA	5 cut(s)	79, 142, 505, 691, 1176
TatI	WGTACW	1 cut(s)	465
TauI	GCSGC	2 cut(s)	1046, 1612
TfiI	GAWTC	3 cut(s)	94, 1493, 2083
TseI	GCWGC	4 cut(s)	1004, 1031, 1331, 1859
TspDTI	ATGAA	4 cut(s)	408, 758, 1217, 1316
Vha464I	CTTAAG	1 cut(s)	1235
VneI	GTGCAC	1 cut(s)	1125
VpaK11BI	GGWCC	2 cut(s)	150, 1388
VspI	ATTAAT	1 cut(s)	1713
XapI	RAATTY	4 cut(s)	764, 967, 1722, 2128
XbaI	TCTAGA	1 cut(s)	403
XceI	RCATGY	4 cut(s)	646, 1002, 1133, 1324
XmiI	GTMKAC	1 cut(s)	1440
XmnI	GAANNNNTTC	2 cut(s)	185, 1269
XspI	CTAG	6 cut(s)	105, 404, 929, 1376, 1490, 1554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.