Rh1BG254500

RAVE protein 1 C terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0003397
Physical Location & Seq
Reverse (-)
38430474 .. 38444913
14440 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG254500.1

Sequence Viewer

Length: 7383 bp
ATGGACCCCACTCACCATCTTCCTCTCCAGATCCTCAGATCCGACCCGACCCCTTCCGCCCCTAACCGATCCGACCCGCCCGGATCCGCCATCGACTGGCTCCCGGACTTCCTTGACCTCTCATGGGTCTCCTACGGCGCCTCCTCCCTCCTCGTCATCTCCCACTTCCCTTCCCCGCTCTCCGAAAACGAAACCGTGATCGGTCCCATTTTCCGGCAGGTTTTCGAGCTCTCCGGTGACCCCTCCTCGGCCGTCAGAGCCGTGGCCTGGTCGCCGGTAATGCCGTCCCTCGGTGAGGTTGCTGCCGCGGCTGAGAATTGCGTTTGGGTGTTCTCGCATGATTCGGCGAGCTCCAAAGGTTCTTTTTGTTGGAGCCAGAATGCAGTGCTTGTAAACTCTGCAAAGGTGGAGGCAATTGGATGGACGGGCTCAGGGGATGGAATAATTGCCAGTGGCGTTGAGGTTGTTTTGTGGAAAAGAAGTGGTAGGTCATGGGAAATTGCTTGGAAGTTTAAAGCAGACCAACCCCAGAGTTTGGTCTCTGCAACTTGGTCTGTTGAAGGACCTTTTGCAACTGCTGCTTATCAGAGTAAATGGCTGATTGAAGGATTGTTGATTAAGGAGGCTAGCAAATGTGTGCTAGTAAGCCAGCGAGATGGCAAATCTGAGTTTGTTAAATCCGAGCTACGACATCCTCTTCCTGTCTCAATGATTCAATGGAGGCCATTAACTGGAAAACCTTTAAGCAGAGATGCAAAACATCCATCAAGGCATGTGCTACTCACTAGTTGCTTAGATGGAACTGTCAGGTTATGGTGCAAGGTTGATGACGGTCGGGCAAGAAAAGTTGGCAAGGACATTAATGATCACAAAACCACGAGGTGGTCATTTTCTGTAGCCGCTGTAATCGAGATAAACCAGGCACTAAATGGGATTCTGGGAATTGATATTTATGTGATGTGGGCCATAGAAACTGGGGGTCTAAACAAAGCTAGTGCGGGGGCTAAAAAATTATTCTCTGCAAACGGTTATGAACATGACCAGCTCGGTAATTGTGAGTGGTTAATTGGGTTCGGTCCTGGAATGCTAGTGAAGTTTTGGGCTTTACACTGTCTCGATGATGTCTCCCCAGTAAGATTTCCCCGGGTTACATTATGGAAGACACAAGAACTACAAGCCCTGGAAGGGGGACATGTTCATAGGACTGGACTTTCAAATTATAATGATAGAATGCCACTTAATAAAGTTGTGATCTTGAGGAACTGCATGTCTGGTCCACCAGTGGTCTGCTCTTTGATTCAGTTGTTACCTTGCAATTCATTGGTTTGGTCACTGTTGTATACTCAATCTTCAAATAATGTAGAGGATCTTACCCTCAATAAACCTGGTATGGAGAACACTTTATCATGCTCAGCTGATGGGATCTTGAATTTGGATGGTCATGCTGGAAGAATCTTACAAGTAGCAGTACATCCTTATAGTTGTGAGGTTGAACTTGCTGTCTCCTTAGATTCTGATGGATTGCTTCTTTTTTGGTTTTTCTCTACCATTTCCAACTATATTTTGGGCCGTCCAACACTAGTGCCAACATGGGATATCTGTGGGAAGCTTGCAACTCAAAGTTCATCTTCCAGGTATTCAAGCGTGAGGTGGGCACCAGCAATACTAAATGAAGTAGCTGTTCTTCTTATGGGACATGCTGGAGGAATTGATTGCTTTATTGTAAAAATTCATCAGGATGAGGAAGAAATTATAGAATGTCACTACTTATGCACTATACCTTTTACAGGTCATGGTCCTTATGAGGATGGGCCCAACAGTATCTCTACAATTCCTTTGCCTCCGACTTGTCATAAAACTCTAAGATGTAGTAAATTTATGCTTTTGGGTGTATGGATGAATGGGTTTCAAGCTCTTTCATGGGAAATCACTTTACATACTTTTGATTTATCCGGAAGCTACTGTGACTGTGATTTTGAGACGGGAAATGGTCCTGAAAGTATGTGGGGATTTGAAGGTACTTTCACCAATGTAAGATATTGTCTAAAAGTAAACGCTTGCTCATCGCAGATACCTGATCCATACATCCATGATGAGGTTACAAGTTTTGCTGTGGTCTGTCAGGGTAGTTTGATGCGTATAGAAAAAAATTTGGGTCCTACTATTGATCAATGCTCTAGTTGTCCTGCTTACTTAATGGCAACAGGCTGCTCTGATGGTTCTTTGAAATTGTGGAGGAGTAGAATTGCTGAACTATCAACTCCTAACATTCCATGGGAACTTGTGGGTATGTTTGTGGCACATAAAGGCCCTATTAGCACTGTATGCTTGTCTGAATGTGGTAGGAAGATTGCAACCATCTGCAAGGATTTTTCTTCAAATACAGTTGGCACTCTTCAGATATGGGATCCTATACATCTTGCAGGTGCAGGGTCATTTGTGTTAGAAGATACAATATCCTTTGATCAAGAACTTGTTGCTTTGAATTGGCTACCTTTGGGAAATGGTCAGTTACTACTGGGAGTTTGCATGCTGAATCAGTTTCGAGTATATTCTCTTGAGCGTTGTGGTGGTCAGACTTTGTTAAACCCTGAAAAATCAGTGAAAAAGAACATCTGGGTCTGCATTGCCTCTACTCATACTTTCCCTCCCATTTGTGACTTCTTTTGGGGACCCAGAGCAACAGCTGTCTTTGTTCATAAGAGTTACTTTTGTGTAAATAGTCAGTGGTTGTTCCTTGTAGATAAGAAACATCTTGCTAATGGTCAGTCAAATGACATAGCAAAAAATTGCATGGATTCTGCAGGTGGAATGAAAGAAGACACTAGTTCTATTTTCTTTGATTGTGAACTTCAACAATTTGATAAAACATTACTTGACGAGAGTAGAAGAGATTGCAAGTCTGGTACACCATTCAAGACTGATTTGAAAAAGGACTATCTATTGAGCAGCTTGTTTGTAGCAAGGTCTCAATTGGATTGTGCTTGGGGTACCAAGCTAGGTTTATGGACAATGCTTGAAGTGGTGGAGAATTTAAGTGGATCTCTGCCAGTTTACCACCCAGAGGCCCTCTTTATGAATATCTATTCAGGAAATTGGAAGCGCGCGTATATTGCATTGAGGCATCTTAATGATTTTCTCTCTTCTGAGTCTTCTTCTGGGAGCAAGCATTACCATTCAAAGTCGAGCATTTTCGTTCCACAGATTTTGTTGTCAACTTTTCTTGATGGGATTATCTCAATAGATTCAAACGATAAAGGATTTCAATGGAGTGGTGATGCAGTCACTTCATCTTCTCAGTTGCAGAGAGACTCTGGCCAGTTTACATACGACTCGTATGCTTCCAATAATTTGTTCAGTTCATCTTCAACAAAATATGGACTTGTTGACTTTGTTGAGCATCTGGAGAAGTTGTATGAATTGGCAGCTATAACCAACATTGAGAGGATGCAGATTCTTGCTATTTTTGATCTTCTCAATGAAATGACTGATTCGAACTCTGGTTCTGCGTATGAAAGTCTCGATGAACCTGGACGGAGGTTCTGGATTGCATTGAGGTTTCAGCAACTACATTTTTTCCGGAAGTTTGGTAGATCAGTATCCGTGGAGGAATTGGTTGTTGACTCTAAGTTGATTGGATGGGCCTACCACTCTGATTGCCAGGAAAATTTGTTTGGATCTTTCCTACCCAATGAACCGTCTTGGCAAGAAATGCGGAATTTGGGTGTAGGATTTTGGTTTACAAATACAGCACAATTGCGTTCAAGGATGGAGAAACTAGCAAGGTTGCAATATCTGAAGAGGAGGGATCCTAAGGATTGTGCATTGCTATATATTGCACTGAATAGAATTCAAGTTCTGACCGGACTTTTCAAAATTAGCAAGGATGAGAAGGACAAGCCCTTAGTCGCATTTCTTTCACGCAATTTTCAGGAAGAGAAAAATAAGGCAGCTGCCTTGAAGAACGCATATGTCTTGATGGGTAGGCATCAACTGGAGTTGGCTGTTGCTTTCTTTCTGCTTGGAGGTGATACTTCTTCTGCTGTCAGTATTTGTGCAAAGAACCTTGGGGATGAACAGCTTGCAGTTGTAATTTGCCGGCTTACTGAAGGGCGTGGTGGACCATTAGAGAGACACCTAATTTCAAAGTCTCTACTACCATATGCAATTGAGAGGGGTGACTCCTGGTTAGCAAGCCTTCTGGAGTGGGAGCTAGGGAACTACTGTCAATCTTTTATAAGCATGCTTGGACTCCAGATAAATTCTGCAACTGAGATGTATGCAACTTTGTCCAGTGGTGTTGCTTTTTCAGACCCAAATGTTGGTCTCTATTGTCTATTGCTAGCAACCAAGAACAGCATGAGGAATGCTGTAGGGGAGCGGAATACTGCAATCCTGAGTAGGTGGGCAGTATTCATGACAGCCACTGCCTTAAAGAGATGTGGACTTCCACTTGAAGCTTTGGAGTACCTTTCATCTCCCACAACCATTCTTGGAGACACAGATCTAGGGACTGTATCAGATATCAGGGATTTTGAGAAGCTAAATGGAATTCTGAATCCTTCTCCAAAGAATTCTTCAAATTGGTTATCAAGTAATGTGGCATTCCGTGTGGAGTCCCTTGCCAGATTAGATTTGGCACTTCAATACTTATCAACATTGGTGAGAGAGCATCCAAGTTGGGCAGATACTGTTGTCGCACCTTCCAGAGCTATTTCACATATAAATGAGTGCGAGAATCATGAACATGTAAAAGTTCTTGGGAGTTTCCGCCAGAAATTATACACATCACTTCATCATTTGGAGCAGAAGTTTTCAGTGGTTCCTTTTCATCTCATCAGCATGGTCTTACTCTCACTGTACAATCGCGGGCTATGGTTTGTTGGGTACGAAATATTACATGCATATACTTCTCAAGACCAAGATCTCAATAAAAGCCAAATAGTTAGATCCCTATTGTATCCTCTTATGCATAAGCAACTTTTGAAGGCTACCAGAGAAACTTCTCTTTTATTTTCACGCGTTATTGCTGCCTGCAGTATAACTTGCTCTAAACTGAAGTCAGATTGTTTAGAAAACAATGTGTCTGGTGAAAGTGGATCTTCAAGCTCAAATGCTTGGGAGTATTACTTTCAAGGTCTTATCCTGTCACTTCGGAGTTTAAGGAGTGCTTTGCAAATTATTTCTGTCTCATCTACTGAAGACCTCATCATGAAACCCCTTATCATCATTGATTGGATTGAGTATTATGTACAGTTTGCTTGTGCATGGCTTCAAAAAAACTCAAAAGTTCTCTTCCTATTAATGCAACCACTTCTGATCACATTTACCAATGGGCATACACCTTATGAAGTTGATTTGATGGATCTGAAGAAAATCCTCCCCCAGATTGCAGAATCGGTGACCCAAAATTCTTTGATTGATAATGTATGCACAGGCCTTCAGGGTTCTCAAGGTACAGATGTAGCACATTTAATTCCAGAAGATGAAAGATGGCAGATCACAGGGGCTTGTTTATGGCAACACATATCCAGACTAATGAAACATAAGCTAGGTATGTTATCTTATAAACTTGATGAAGGCTGTATTTCTGGTGTTCCCGATGGAAAACATTTCTCATCGGTGCCTTGCTCTGAACATTTGGGTCCTGATGACAACAGAACTGAAGAAGTGATTGGGTTGGTTTCATTGTCCTTGGTTAAATTATTAAAGACCACACTTGCACATGTTTCTTCTTATCATGTGATGCGTCTAGCATCACATCTGCAGCATAAGATGGATAATGGGTTGCATGTAATGACTCTTGTTTGGTTAGAAGAATATAACCAGTCTCAGACCAGAGGCCTCAATCAGCATTTGAATCAGGACATGCTCAAATTGGAGACAATAGGTGAAAAACATGGATCTGACATATTATGGGATATTTGTGCAGATCCTAAAATAATATGTGAGAGTTTCACCCAGGAAAAAATAAACTGGCCTCACTCCCTTGATCATAAACCGTCTAAAGGATGGAATAACATATATAGAGGCGTCAAAACTGTAGATGAGACTGAGGAAACTCATAACCATGAACTTACACCTAAGAGTACTTCTGCCAATAGTGAAGCTGGATTACCTTCTAGAAGTCTATTTCGCAGTGGCCACTCTTTCCTTAGCGGATGGCAGAAAGATACAACCGCTACAAAGGATGTCTCACCTTTCCTGAACCCAAAAGAAATATATAAGAGAAATGGGGAGCTTTTGGAGGCATTGTGTCTCAACTCTGTTAATCAGAAACAAGCTGCTCTTGCAAGCAACCGAAAGGGCATCATATTTTTTAATTGGAAAGATGATATGCCTGATAGAGATCATTCAGACTATATCTGGTCAGAGGCTGATTGGCCACTGAACGGGTGGGCTGGTTCTGAATCAACGCCAGCTCCAACATATGTATCTCCTGGTGTTGGTCTTGGAATCAAAAAAGGAACACACGTTGGACTGGGTGGAGCAACTGTTGGTGTAGGATCTTTGGCAAGGTCAGCAAGAGACTTGAGAGGTGGAGGAGCATTTGGGAATCAAGGTTATCCTGGAATGCGTGTGTCTGGTTTAGGTTGGGAAACTCGAGAGGACTTTGAGGAAGTTGTTGATGCACCACCTACTGTTGAGAATGCAAGCACAAGGGTTTTTTCCAGTCACCCATCAAGACCTTTCTTCTTGGTTGGTTCTAGCAATACACACATTTACTTATGGGAGTTTGGCAAAGACAAAGCTACTGCAACTTATGGAGTTCTGCCTGCTGCAAATGTCTCTCCACCTTATGCTCTGGCATCGATATCTGCTCTGCAGTTTGATCACTGTGGACACAGATTTGCTACCGCTGCCTTAGACGGAACTGTATGCACATGGCAGCTGGAGGTGGGAGGAAGGAGTAATATTCGTCCTACAGAATCATCTCTATGCTTTAACAGTCATGCATCGGATGTTGCTTATGTTACATCAAGTGGATCAATCATTGCTGTGGCTGGATATAGCTCCAGTAGTGTTAATGTGGTCATATGGGATACATTGGCTCCACCTTCTACCTCACGAGCTTCCATTATTTGTCATGAAGGTGGGGCGCGCTCTCTTTCTGTTTTCGATAATGACATAGGAAGTGGATCTATTTCACCCCTTATTGTGACTGGTGGTAAAGGTGGTGATGTTGGACTTCACGACTTCCGGTATATTGCTACTGGAAGGAGTAAAAGGCACAGGCATACTGATAAAGGTGAACAAGCTGTGAAGACATCATCAAATATTGATCATCATCCTGCGGATGGTAACAGATTTGGGGAACAAAATCAGAATGGGATGCTGTGGTACATACCAAAAGCTCACTCAGGTATAACCTACTGCAATTAA

Protein Analysis

2460

Amino Acids

272.4

Weight (kDa)

6.17

Isoelectric Point (pI)

42.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rav1p_C PF12234 756 - 1421 2.2e-73 RAVE protein 1 C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1221, 4238, 5568
AarI CACCTGC 2 cut(s) 2414, 2795
Acc36I ACCTGC 3 cut(s) 208, 2414, 2795
Acc65I GGTACC 1 cut(s) 2990
AccB1I GGYRCC 4 cut(s) 137, 1654, 2990, 5623
AccB7I CCANNNNNTGG 5 cut(s) 96, 535, 731, 882, 4322
AccBSI CCGCTC 2 cut(s) 178, 4381
AccI GTMKAC 1 cut(s) 1340
AccII CGCG 6 cut(s) 308, 3105, 3107, 4869, 5022, 7102
AccIII TCCGGA 2 cut(s) 1952, 3579
AcoI YGGCCR 4 cut(s) 249, 3316, 6142, 6383
AcuI CTGAAG 8 cut(s) 2381, 3818, 4128, 5078, 5220, 5390, 5426, 5685
AcyI GRCGYC 2 cut(s) 138, 6033
AdeI CACNNNGTG 1 cut(s) 882
AflIII ACRYGT 5 cut(s) 1192, 4747, 5020, 5725, 6472
AhlI ACTAGT 3 cut(s) 785, 1579, 2825
AjuI GAANNNNNNNTTGG 8 cut(s) 3338, 3370, 3657, 3689, 4561, 4593, 5658, 5690
Alw21I GWGCWC 2 cut(s) 231, 353
AlwNI CAGNNNCTG 3 cut(s) 4427, 4691, 6377
Ama87I CYCGRG 2 cut(s) 1143, 6603
Aor13HI TCCGGA 2 cut(s) 1952, 3579
ApaI GGGCCC 1 cut(s) 1815
ArsI GACNNNNNNTTYG 2 cut(s) 1958, 1990
AseI ATTAAT 2 cut(s) 861, 5303
Asp718I GGTACC 1 cut(s) 2990
AspLEI GCGC 5 cut(s) 140, 3105, 3107, 7102, 7104
AsuC2I CCSGG 4 cut(s) 81, 104, 1144, 1145
AsuII TTCGAA 1 cut(s) 3494
AsuNHI GCTAGC 2 cut(s) 626, 4342
AvaI CYCGRG 2 cut(s) 1143, 6603
AxyI CCTNAGG 1 cut(s) 3813
BaeGI GKGCMC 2 cut(s) 1657, 1815
BaeI ACNNNNGTAYC 6 cut(s) 4680, 4713, 5448, 5481, 6417, 6450
BalI TGGCCA 3 cut(s) 3318, 6144, 6385
BamHI GGATCC 3 cut(s) 83, 2407, 3808
BanI GGYRCC 4 cut(s) 137, 1654, 2990, 5623
BanII GRGCYC 4 cut(s) 231, 353, 431, 1815
BarI GAAGNNNNNNTAC 4 cut(s) 1668, 1700, 6099, 6131
BauI CACGAG 2 cut(s) 877, 7068
BbsI GAAGAC 5 cut(s) 1166, 2826, 3144, 5208, 7271
Bbv12I GWGCWC 2 cut(s) 231, 353
BceAI ACGGC 5 cut(s) 151, 236, 245, 268, 1554
BcgI CGANNNNNNTGC 2 cut(s) 3320, 3354
BciVI GTATCC 3 cut(s) 3610, 4971, 7036
BclI TGATCA 7 cut(s) 865, 2167, 2464, 5319, 5992, 6832, 7282
BcnI CCSGG 4 cut(s) 81, 104, 1144, 1145
BcuI ACTAGT 3 cut(s) 785, 1579, 2825
BfmI CTRYAG 8 cut(s) 894, 2802, 4371, 5035, 5765, 6042, 6824, 6924
BfoI RGCGCY 1 cut(s) 141
BfuAI ACCTGC 3 cut(s) 208, 2414, 2795
BfuI GTATCC 3 cut(s) 3610, 4971, 7036
BglII AGATCT 2 cut(s) 4504, 4924
BlpI GCTNAGC 1 cut(s) 1411
BmcAI AGTACT 1 cut(s) 6091
BmeT110I CYCGRG 2 cut(s) 1143, 6603
BmrI ACTGGG 4 cut(s) 984, 1124, 2528, 6491
BmtI GCTAGC 2 cut(s) 630, 4346
BmuI ACTGGG 4 cut(s) 984, 1124, 2528, 6491
BpiI GAAGAC 5 cut(s) 1166, 2826, 3144, 5208, 7271
BpmI CTGGAG 8 cut(s) 11, 1722, 3425, 4016, 4223, 4238, 6914, 7000
Bpu10I CCTNAGC 2 cut(s) 430, 6155
Bpu1102I GCTNAGC 1 cut(s) 1411
Bpu14I TTCGAA 1 cut(s) 3494
BpuEI CTTGAG 5 cut(s) 1276, 2579, 4899, 5436, 6553
BpuMI CCSGG 4 cut(s) 81, 104, 1144, 1145
Bsa29I ATCGAT 1 cut(s) 6812
BsaBI GATNNNNATC 3 cut(s) 3598, 6348, 7287
BsaHI GRCGYC 2 cut(s) 138, 6033
BsaI GGTCTC 4 cut(s) 133, 544, 2973, 4331
BsaWI WCCGGW 5 cut(s) 233, 1952, 3579, 3863, 7200
Bse118I RCCGGY 2 cut(s) 274, 4098
Bse21I CCTNAGG 1 cut(s) 3813
Bse3DI GCAATG 3 cut(s) 2625, 3824, 6993
Bse8I GATNNNNATC 3 cut(s) 3598, 6348, 7287
BseAI TCCGGA 2 cut(s) 1952, 3579
BseCI ATCGAT 1 cut(s) 6812
BseJI GATNNNNATC 3 cut(s) 3598, 6348, 7287
BseMI GCAATG 3 cut(s) 2625, 3824, 6993
BsePI GCGCGC 2 cut(s) 3103, 7100
BseRI GAGGAG 6 cut(s) 133, 140, 235, 2251, 3817, 6558
BseSI GKGCMC 2 cut(s) 1657, 1815
BseX3I CGGCCG 1 cut(s) 249
BsgI GTGCAG 2 cut(s) 2448, 5949
Bsh1236I CGCG 6 cut(s) 308, 3105, 3107, 4869, 5022, 7102
Bsh1285I CGRYCG 2 cut(s) 252, 835
BshNI GGYRCC 4 cut(s) 137, 1654, 2990, 5623
BshVI ATCGAT 1 cut(s) 6812
BsiEI CGRYCG 2 cut(s) 252, 835
BsiHKAI GWGCWC 2 cut(s) 231, 353
BsiHKCI CYCGRG 2 cut(s) 1143, 6603
BslFI GGGAC 7 cut(s) 189, 271, 1203, 1707, 2685, 4525, 4603
BsmBI CGTCTC 1 cut(s) 1973
BsmFI GGGAC 7 cut(s) 189, 271, 1203, 1707, 2685, 4525, 4603
BsmI GAATGC 7 cut(s) 385, 1089, 1236, 4372, 4604, 6579, 6655
Bso31I GGTCTC 4 cut(s) 133, 544, 2973, 4331
BsoBI CYCGRG 2 cut(s) 1143, 6603
Bsp119I TTCGAA 1 cut(s) 3494
Bsp120I GGGCCC 1 cut(s) 1811
Bsp1286I GDGCHC 5 cut(s) 231, 353, 431, 1657, 1815
Bsp13I TCCGGA 2 cut(s) 1952, 3579
Bsp1407I TGTACA 2 cut(s) 4860, 5251
Bsp1720I GCTNAGC 1 cut(s) 1411
Bsp19I CCATGG 1 cut(s) 2273
BspDI ATCGAT 1 cut(s) 6812
BspEI TCCGGA 2 cut(s) 1952, 3579
BspFNI CGCG 6 cut(s) 308, 3105, 3107, 4869, 5022, 7102
BspHI TCATGA 4 cut(s) 4416, 4741, 5211, 7087
BspMAI CTGCAG 4 cut(s) 2806, 5039, 5769, 6828
BspMI ACCTGC 3 cut(s) 208, 2414, 2795
BspOI GCTAGC 2 cut(s) 630, 4346
BspT104I TTCGAA 1 cut(s) 3494
BspT107I GGYRCC 4 cut(s) 137, 1654, 2990, 5623
BspTNI GGTCTC 4 cut(s) 133, 544, 2973, 4331
BsrBI CCGCTC 2 cut(s) 178, 4381
BsrDI GCAATG 3 cut(s) 2625, 3824, 6993
BsrFI RCCGGY 2 cut(s) 274, 4098
BsrGI TGTACA 2 cut(s) 4860, 5251
BssAI RCCGGY 2 cut(s) 274, 4098
BssHII GCGCGC 2 cut(s) 3103, 7100
BssNAI GTATAC 1 cut(s) 1341
BssNI GRCGYC 2 cut(s) 138, 6033
BssSI CACGAG 2 cut(s) 877, 7068
BssT1I CCWWGG 3 cut(s) 2273, 4066, 5694
Bst1107I GTATAC 1 cut(s) 1341
Bst2BI CACGAG 2 cut(s) 877, 7068
Bst6I CTCTTC 7 cut(s) 702, 2400, 2884, 3148, 3794, 3930, 5300
BstACI GRCGYC 2 cut(s) 138, 6033
BstAPI GCANNNNNTGC 3 cut(s) 578, 2325, 3712
BstAUI TGTACA 2 cut(s) 4860, 5251
BstBI TTCGAA 1 cut(s) 3494
BstDSI CCRYGG 4 cut(s) 261, 306, 2273, 3603
BstEII GGTNACC 2 cut(s) 236, 5401
BstENI CCTNNNNNAGG 2 cut(s) 293, 1785
BstFNI CGCG 6 cut(s) 308, 3105, 3107, 4869, 5022, 7102
BstH2I RGCGCY 1 cut(s) 141
BstHHI GCGC 5 cut(s) 140, 3105, 3107, 7102, 7104
BstMCI CGRYCG 2 cut(s) 252, 835
BstPI GGTNACC 2 cut(s) 236, 5401
BstSFI CTRYAG 8 cut(s) 894, 2802, 4371, 5035, 5765, 6042, 6824, 6924
BstSLI GKGCMC 2 cut(s) 1657, 1815
BstUI CGCG 6 cut(s) 308, 3105, 3107, 4869, 5022, 7102
BstV2I GAAGAC 5 cut(s) 1166, 2826, 3144, 5208, 7271
BstXI CCANNNNNNTGG 1 cut(s) 656
BstZ17I GTATAC 1 cut(s) 1341
BstZI CGGCCG 1 cut(s) 249
Bsu15I ATCGAT 1 cut(s) 6812
Bsu36I CCTNAGG 1 cut(s) 3813
BsuI GTATCC 3 cut(s) 3610, 4971, 7036
BsuTUI ATCGAT 1 cut(s) 6812
BtgI CCRYGG 4 cut(s) 261, 306, 2273, 3603
BtgZI GCGATG 1 cut(s) 2049
BtsI GCAGTG 3 cut(s) 390, 4425, 6145
BveI ACCTGC 3 cut(s) 208, 2414, 2795
CaiI CAGNNNCTG 3 cut(s) 4427, 4691, 6377
CciI TCATGA 4 cut(s) 4416, 4741, 5211, 7087
CfoI GCGC 5 cut(s) 140, 3105, 3107, 7102, 7104
Cfr10I RCCGGY 2 cut(s) 274, 4098
Cfr42I CCGCGG 1 cut(s) 309
Cfr9I CCCGGG 1 cut(s) 1143
ClaI ATCGAT 1 cut(s) 6812
CseI GACGC 2 cut(s) 5738, 6022
CsiI ACCWGGT 1 cut(s) 1384
CspCI CAANNNNNGTGG 6 cut(s) 3189, 3224, 3638, 3673, 4581, 4616
DinI GGCGCC 1 cut(s) 139
DraI TTTAAA 1 cut(s) 514
DraIII CACNNNGTG 1 cut(s) 882
EaeI YGGCCR 4 cut(s) 249, 3316, 6142, 6383
EagI CGGCCG 1 cut(s) 249
Eam1104I CTCTTC 7 cut(s) 702, 2400, 2884, 3148, 3794, 3930, 5300
EarI CTCTTC 7 cut(s) 702, 2400, 2884, 3148, 3794, 3930, 5300
EciI GGCGGA 3 cut(s) 46, 76, 4760
Ecl136II GAGCTC 2 cut(s) 229, 351
EclXI CGGCCG 1 cut(s) 249
Eco130I CCWWGG 3 cut(s) 2273, 4066, 5694
Eco147I AGGCCT 2 cut(s) 5439, 5844
Eco24I GRGCYC 4 cut(s) 231, 353, 431, 1815
Eco31I GGTCTC 4 cut(s) 133, 544, 2973, 4331
Eco32I GATATC 3 cut(s) 1597, 4525, 6816
Eco52I CGGCCG 1 cut(s) 249
Eco53kI GAGCTC 2 cut(s) 229, 351
Eco57I CTGAAG 8 cut(s) 2381, 3818, 4128, 5078, 5220, 5390, 5426, 5685
Eco81I CCTNAGG 1 cut(s) 3813
Eco88I CYCGRG 2 cut(s) 1143, 6603
Eco91I GGTNACC 2 cut(s) 236, 5401
EcoICRI GAGCTC 2 cut(s) 229, 351
EcoNI CCTNNNNNAGG 2 cut(s) 293, 1785
EcoO109I RGGNCCY 6 cut(s) 563, 2156, 2309, 2672, 3067, 5645
EcoO65I GGTNACC 2 cut(s) 236, 5401
EcoRI GAATTC 3 cut(s) 3849, 4551, 4573
EcoRV GATATC 3 cut(s) 1597, 4525, 6816
EcoT14I CCWWGG 3 cut(s) 2273, 4066, 5694
EcoT22I ATGCAT 3 cut(s) 4906, 4974, 6958
EcoT38I GRGCYC 4 cut(s) 231, 353, 431, 1815
EgeI GGCGCC 1 cut(s) 139
EheI GGCGCC 1 cut(s) 139
ErhI CCWWGG 3 cut(s) 2273, 4066, 5694
Esp3I CGTCTC 1 cut(s) 1973
FaqI GGGAC 7 cut(s) 189, 271, 1203, 1707, 2685, 4525, 4603
FauI CCCGC 4 cut(s) 84, 183, 991, 4862
FauNDI CATATG 4 cut(s) 3970, 4162, 6430, 7037
FbaI TGATCA 7 cut(s) 865, 2167, 2464, 5319, 5992, 6832, 7282
FblI GTMKAC 1 cut(s) 1340
FriOI GRGCYC 4 cut(s) 231, 353, 431, 1815
GlaI GCGC 5 cut(s) 139, 3104, 3106, 7101, 7103
GsuI CTGGAG 8 cut(s) 11, 1722, 3425, 4016, 4223, 4238, 6914, 7000
HaeII RGCGCY 1 cut(s) 141
HgaI GACGC 2 cut(s) 5738, 6022
HhaI GCGC 5 cut(s) 140, 3105, 3107, 7102, 7104
Hin1I GRCGYC 2 cut(s) 138, 6033
Hin6I GCGC 5 cut(s) 138, 3103, 3105, 7100, 7102
HinP1I GCGC 5 cut(s) 138, 3103, 3105, 7100, 7102
HincII GTYRAC 3 cut(s) 3216, 3388, 3622
HindII GTYRAC 3 cut(s) 3216, 3388, 3622
HindIII AAGCTT 2 cut(s) 1607, 4458
HpyCH4IV ACGT 1 cut(s) 6474
HpySE526I ACGT 1 cut(s) 6474
Hsp92I GRCGYC 2 cut(s) 138, 6033
HspAI GCGC 5 cut(s) 138, 3103, 3105, 7100, 7102
KasI GGCGCC 1 cut(s) 137
KflI GGGWCCC 1 cut(s) 2672
Kpn2I TCCGGA 2 cut(s) 1952, 3579
KpnI GGTACC 1 cut(s) 2994
KroI GCCGGC 1 cut(s) 4098
KroNI GCCGGC 1 cut(s) 4100
Ksp22I TGATCA 7 cut(s) 865, 2167, 2464, 5319, 5992, 6832, 7282
KspI CCGCGG 1 cut(s) 309
MabI ACCWGGT 1 cut(s) 1384
MaeII ACGT 1 cut(s) 6474
MbiI CCGCTC 2 cut(s) 178, 4381
MfeI CAATTG 4 cut(s) 414, 2972, 3755, 4167
MhlI GDGCHC 5 cut(s) 231, 353, 431, 1657, 1815
MlsI TGGCCA 3 cut(s) 3318, 6144, 6385
MluI ACGCGT 1 cut(s) 5020
MluNI TGGCCA 3 cut(s) 3318, 6144, 6385
Mly113I GGCGCC 1 cut(s) 138
MlyI GAGTC 8 cut(s) 3158, 3305, 3326, 3617, 4175, 4245, 4625, 5794
MmeI TCCRAC 9 cut(s) 66, 96, 350, 1578, 1598, 1868, 6449, 6457, 7165
Mox20I TGGCCA 3 cut(s) 3318, 6144, 6385
Mph1103I ATGCAT 3 cut(s) 4906, 4974, 6958
MroI TCCGGA 2 cut(s) 1952, 3579
MroNI GCCGGC 1 cut(s) 4098
MscI TGGCCA 3 cut(s) 3318, 6144, 6385
MslI CAYNNNNRTG 9 cut(s) 1737, 3129, 4725, 4746, 4841, 6069, 6937, 6998, 7092
Msp20I TGGCCA 3 cut(s) 3318, 6144, 6385
MspA1I CMGCKG 7 cut(s) 308, 902, 1415, 2687, 3953, 6860, 6892
MunI CAATTG 4 cut(s) 414, 2972, 3755, 4167
Mva1269I GAATGC 7 cut(s) 385, 1089, 1236, 4372, 4604, 6579, 6655
MvnI CGCG 6 cut(s) 308, 3105, 3107, 4869, 5022, 7102
NaeI GCCGGC 1 cut(s) 4100
NarI GGCGCC 1 cut(s) 138
NciI CCSGG 4 cut(s) 81, 104, 1144, 1145
NcoI CCATGG 1 cut(s) 2273
NdeI CATATG 4 cut(s) 3970, 4162, 6430, 7037
NgoMIV GCCGGC 1 cut(s) 4098
NheI GCTAGC 2 cut(s) 626, 4342
NmeAIII GCCGAG 1 cut(s) 227
NsiI ATGCAT 3 cut(s) 4906, 4974, 6958
NspV TTCGAA 1 cut(s) 3494
PaeI GCATGC 2 cut(s) 2533, 4246
PaeR7I CTCGAG 1 cut(s) 6603
PagI TCATGA 4 cut(s) 4416, 4741, 5211, 7087
PaqCI CACCTGC 2 cut(s) 2414, 2795
PauI GCGCGC 2 cut(s) 3103, 7100
PceI AGGCCT 2 cut(s) 5439, 5844
PciI ACATGT 3 cut(s) 1192, 4747, 5725
PctI GAATGC 7 cut(s) 385, 1089, 1236, 4372, 4604, 6579, 6655
PdiI GCCGGC 1 cut(s) 4100
PflMI CCANNNNNTGG 5 cut(s) 96, 535, 731, 882, 4322
PfoI TCCNGGA 3 cut(s) 102, 1078, 6568
PleI GAGTC 8 cut(s) 3157, 3305, 3326, 3617, 4175, 4245, 4624, 5794
PluTI GGCGCC 1 cut(s) 141
PpsI GAGTC 8 cut(s) 3157, 3305, 3326, 3617, 4175, 4245, 4624, 5794
PpuMI RGGWCCY 4 cut(s) 563, 2156, 2672, 5645
PscI ACATGT 3 cut(s) 1192, 4747, 5725
PshBI ATTAAT 2 cut(s) 861, 5303
PsiI TTATAA 3 cut(s) 1221, 4238, 5568
Psp124BI GAGCTC 2 cut(s) 231, 353
Psp5II RGGWCCY 4 cut(s) 563, 2156, 2672, 5645
PspEI GGTNACC 2 cut(s) 236, 5401
PspOMI GGGCCC 1 cut(s) 1811
PspPPI RGGWCCY 4 cut(s) 563, 2156, 2672, 5645
PstI CTGCAG 4 cut(s) 2806, 5039, 5769, 6828
PstNI CAGNNNCTG 3 cut(s) 4427, 4691, 6377
PteI GCGCGC 2 cut(s) 3103, 7100
PvuII CAGCTG 4 cut(s) 1415, 2687, 3953, 6892
RseI CAYNNNNRTG 9 cut(s) 1737, 3129, 4725, 4746, 4841, 6069, 6937, 6998, 7092
SacI GAGCTC 2 cut(s) 231, 353
SacII CCGCGG 1 cut(s) 309
ScaI AGTACT 1 cut(s) 6091
SchI GAGTC 8 cut(s) 3158, 3305, 3326, 3617, 4175, 4245, 4625, 5794
SduI GDGCHC 5 cut(s) 231, 353, 431, 1657, 1815
SexAI ACCWGGT 1 cut(s) 1384
SfcI CTRYAG 8 cut(s) 894, 2802, 4371, 5035, 5765, 6042, 6824, 6924
SfoI GGCGCC 1 cut(s) 139
Sfr274I CTCGAG 1 cut(s) 6603
Sfr303I CCGCGG 1 cut(s) 309
SfuI TTCGAA 1 cut(s) 3494
SgrBI CCGCGG 1 cut(s) 309
SlaI CTCGAG 1 cut(s) 6603
SmaI CCCGGG 1 cut(s) 1145
SmiMI CAYNNNNRTG 9 cut(s) 1737, 3129, 4725, 4746, 4841, 6069, 6937, 6998, 7092
SmlI CTYRAG 6 cut(s) 1255, 2558, 4914, 5451, 6532, 6603
SmoI CTYRAG 6 cut(s) 1255, 2558, 4914, 5451, 6532, 6603
SpeI ACTAGT 3 cut(s) 785, 1579, 2825
SphI GCATGC 2 cut(s) 2533, 4246
SseBI AGGCCT 2 cut(s) 5439, 5844
SspDI GGCGCC 1 cut(s) 137
SspI AATATT 3 cut(s) 4896, 6916, 7279
SstI GAGCTC 2 cut(s) 231, 353
StuI AGGCCT 2 cut(s) 5439, 5844
StyI CCWWGG 3 cut(s) 2273, 4066, 5694
TaiI ACGT 1 cut(s) 6477
TaqII GACCGA 2 cut(s) 191, 1064
TatI WGTACW 4 cut(s) 1468, 4860, 5251, 6089
TauI GCSGC 3 cut(s) 308, 311, 902
TspGWI ACGGA 4 cut(s) 3550, 3592, 4598, 6885
TspMI CCCGGG 1 cut(s) 1143
Van91I CCANNNNNTGG 5 cut(s) 96, 535, 731, 882, 4322
VspI ATTAAT 2 cut(s) 861, 5303
XagI CCTNNNNNAGG 2 cut(s) 293, 1785
XbaI TCTAGA 1 cut(s) 6122
XcmI CCANNNNNNNNNTGG 4 cut(s) 926, 1561, 4633, 6393
XhoI CTCGAG 1 cut(s) 6603
XmaI CCCGGG 1 cut(s) 1143
XmiI GTMKAC 1 cut(s) 1340
ZrmI AGTACT 1 cut(s) 6091
Zsp2I ATGCAT 3 cut(s) 4906, 4974, 6958
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.