RLG00000027832

RAVE protein 1 C terminal

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
15752195 .. 15766669
14475 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027832

Sequence Viewer

Length: 7767 bp
ATGGTAGACTCGGACACACCCTCCTATCATCTACTTGCTCCAACTCAAACTCACCATTCCGAACTCTTCCCTATCACCATGGACCCCACTCCCCATCTTCCTCTCCAGATCCTCAGATCCGACCCGACCCCTTCCGCCCCTAACCGATCCGACCCGCCCGGATCCGCCATCGACTGGCTCCCGGACTTCCTCGACCTCTCATGGGTCTCCTACGGCGCCTCCTCCCTCCTCGTCATCTCCCACTTCCCTTCCCCCCTCTCCGAAAACGAAACCGTGATCGGTCCCATTTTCCGGCAGGTTTTCGAGCTCTCCGGCGACCCCTCCTCGGCCGTCAGAGCCGTGGCTTGGTCGCCGGTAATGCCGTCTCTCGGTGAGGTAGCGGCCGCGGCTGAGAATTGCGTTTGGGTGTTCTCGCATGATTCGGCGAGCTCCAAAGGTTCTTTTTGTTGGAGCCAGAATGCAGTGCTTGTAAACTCTGCAAAGGTGGAGGCAATTGGATGGACGGGGTCAGGGGATGGAATAATTGCCAGTGGCATTGAGGTTGTTTTATGGAAAAGAAGTGGGAGGTCATGGGAAATTGCTTGGAAGTTTAAAGCAGACCAACCCCAGAGTTTGGTCTCTGCAACTTGGTCTGTTGAAGGACCTTTTGCAACTGCTGCTTATCAGAGTAAATGGCTGATTGAAGGATTGTTGACTAAGGAGGCTAGCAAATGTGTGCTAGTAAGCCAGCGAGATGGCAAATCTGAGTTTGTTAAATCTGAGCTACAACATCCTCTTCCTGTCTCAATGATTCAATGGAGGCCATTAACAGGAAAACCTTTAAGCAGAGATGCAAAACATCCATCAAGGCATGTGCTACTCACTAGTTGCTTAGATGGAACTGTCAGGTTATGGTGCGCGGTTGATGACGGACGGGCAAGAAAAGTTGCTAAGGACATCAATGATCACAAAACCACAAGGTGGTCATTTTCTGTAGCTGCTGTAATCGAGATAAACCAGGCACTGAATGGGATTCTGGGAATTGATATTTATGTGACATGGGCCATAGAAAGTGGGGGTCTAAACAAAGCTAGTGCGGGGCCTAACAAATTATTCTCTGCAACTGGTTATGAACATGACCAGCTCGGTAATTGTGAGTGGCTAATTGGGTTCGGTCCTGGAATGCTAGTGAAGTTTTGGGCTTTACATTGTCTCGATGATGTCTCCCCAGTAAGATTTCCCCGGGTTACGTTATGGAAGACACAAGAACTACAAGTCCTGGAAGGGGGACGTATTCATAGGACTGGACTTTCAAATTATAATGATAGAATACCACTTAATAAAGTTGTGATCTTCAGGAACTGTATATCTGGTCCACCAGTGGTCTGCTCTTTGATTCAGTTGTTACCTTGCAATTCATTGGTTTGGTCACTGTTGCATACTCAATCTTCAAATAATGTAGAGGATCTTACCCTCAATAAACCTGGTATGGAGAACACTTTATCATGTTCAGCTGCTGGGCTCTTGAATTTGGATGGTCATGCTGGAAGAATCTTGCAAGTAGCAGTACATCCTTATAGTTGTGAGGTTGAACTTGCTGTCTCCTTAGATTCTGATGGATTGCTTCTTTTTTGGTTTTTCTCTACCATTTCCAACTATATTTTGGGCCGTCCAACACTAGTTCCAACATGGGATATCTGTGGGAAGCTTGCAACTCAAAGTTCATCTTCCAGGTATACAAGCATGAGGTGGGCACCAGCAATACTAAATGAAGTAGCTGTTCTTCTTATGGGACATGCTGGAGGAATTGATTGCTTTATTGTAAAAATTCATCAGGATGAGGAAGAAATTATAGAATGTCACTACTTATGCACTATACCTTTTACAGGTCATGGTCCTTATGAGGATGGGCCTAACAGTATCTCGACAATTCCTTTGCCTCTGACTTGTCATAAAACTCTAAGATGTAGTAAATTTATTCTTTTGGGTATATGGATGAATGGGTTTCAAGCTCTTTCATGGGAAATCACTTTACATACTTTTGATTTATCCGGAAGCTACTGTGACTGTGATTTTGAAACTGGAAATGGTCCTGAAAGTATGTGGGGATTTGAAGGTACTTTCACCAATATAAGATATTGTCTAAAAGTAAATGCTTGCTCATCGCAGATACCTGATCCATACATCCATGATGAGGTTACAAGTTTTGCTGTGGTCTGTCAGGGTAGTTTGATGCGTATAGAAAAAAATTTGGGTCCTACTATTGATCAATGCTCTAGTTGTCCTGCTTATTTAATGGCAACAGGCTGCTCTGATGGTACTTTGAAATTGTGGAGGAGTAGAATTGATAAACTATCAACTCCTAACATTCCATGGGAACTTGTGGGTATGTTTGTGGCACATAAAGGCCCTATTAGCACTGTATGCTTGTCTGAATGTGGTCGGAAGATTGCAACCATCTGCAAGGATTTTTCTTCAAATACGGTTGGCACTCTTCAGATATGGGATCCTATACATCTTGCAGGTGCAGGGTCATTTATGTTAGAAGATACAATATCCTTTGATCAAGAACTTGTTGCTTTGAATTGGCTACCTTTGGGAAATGGTCAGTTACTACTTGGAGTTTGCATGCTGAATCAGTTTCGAGTATATTCTCTTGAGCGTTGTGGTGGTCAGACTTTGCTAAACCCTGAAAAATCAGTGAAAAAGAACATGTGGGTCTGCATTGCCTCTACTCATACTTTCCCTCCCATTTGTGACTTCTTTTGGGGACCCAGAGCAACAGCTGTCTTTGTTCATAAGAGTTACTTTTGTGTAAACAGTCAGTGGTTGTTCCTTGTAGATAAGAAACATCTTGCTAATGGGCAGTCAAATGACATAGCAGAAAATTGCATGGATTCTGCCGGTGGAATGAAAGAAGACACTAGTTCAATTTTCTTTGATTGTGAACTTCAACAATTTGATAAAACATTACTTGACGAGAGTAGAAGAGATTGCAAGTCTGGTGCACCATTCAAGACTGATTTGAAAAAGGACTATCTATCGAGCAGCTTGTTTGTAGCAAGGTCTCAATTGGATTGTGCTTGGGGTACCAAGCTAGGTTTATGGACAATGCTTCAAGTGGTGGAGAAGTTAAGTGGATCTCTGCCAGTTTACCACCCAGAGGCCCTCTTTTTGAATATCTATTCAGGAAATTGGAAGCGCACGTATATTGCATTGAGGCATCTTAATGATTTTCTCTCTTCTGATTCTTCTTCCGGGAGCAAGCATTACCCTTCAAAGTCGAGCATTTTCGTTCCACAGATTTTGTTGTCAACTTTTCTTGATGGGATTATCTCAATAGAGTCAAACGATAAAGGATTTCAATGGAGTGGTGATGCAGGCACTTCATCTTCTCAGTTGCAGAGAGACTCTGGCCAGTTTACATACGACTCTTATGCTTCCAATAATATGTTCAGTTCATCTTCAACAAAATATGGACTTGTTGACTTTGTTGAGCATCTGGAGAAGTTGTATGAATTGGCAGCTATAACCAACATTGAGAGGATGCAGATTCTTGCTATTTTTGATCTTCTCAATGAAATGACTAATTCGAACTCTGGTTCTGCGTATGAAAGTCTCGATGAACCTGGACGGAGGTTCTGGATTGCATTGAGGTTTCAGCAACTACATTTTTTCCGAAAGTTTGGTAGATCAGTATCTGTGGAGGAATTGGTTGTTGACTCTAAGTTGATTGGATGGGCCTACCACTCTGATTGCCAGGAAAATTTGTTTGGATCTTTCCTACCCAATGAACCGTCTTGGCAAGAAATGCGGAATTTGGGTGTAGGATTTTGGTTTACAAATACAGCACAATTGCGTTCAAGGATGGAGAAACTAGCAAGGCTGCAATATCTGAAGAGGAGGGATCCTAAGGATTGTGCATTGCTATATATTGCACTGAATAGAATTCAAGTTCTGACCGGACTTTTCAAAATTAGCAAGGATGAGAAGGACAAGCCCTTAGTCGCATTTCTTTCACGCAATTTTCAGGAAGAGAAAAATAAGGCAGCTGCCTTGAAGAACGCATATGTCTTGATGGGTAGGCATCAACTGGAGTTGGCTGTTGCTTTCTTTCTGCTTGGAGGTGATACTTCTTCTGCTGTCAGTATTTGTGCAAAGAACCTTGGGGATGAACAGCTTGCAGTTGTAATTTGCCGGCTTACTGAAGGGCGTGGTGGACCATTAGAGAGACACCTAATTTCAAAGTCTCTACTACCATTTGCAATTGAGAGGGGTGACTCCTGGTTAGCGAGCCTTCTGGAGTGGGAGCTAGGGAACTACTATCAATCTTTTATAAGCATGCTTGGATTCCAGATAAATTCTGCAACTAAGATGTATGCAACTTTGTCCAATAGTGTTGCTTTTTCAGACCCAAATGTTGGTCTCTATTGTCTATTGCTAGCAACCAAGAACAGCATGAGGAATGCTGTAGGGGAGCGGAATACCGCAATCCTGAGTAGGTGGGCAGTATTTATGACAGCTACTGCCTTAAAGAGATGTGGACTTCCACTTGAAGCTTTGGAGTACCTTTCATCTCCCACAACCATTCTTGGAGACACAGATCTAGGGACTGTATCAGATATCGGGGATTTTGAGAAGCTAAATGGAATTCTGAATCCTTCTCCAAAGAATTCTTCAAATTGGTTATCAAGTAATGTGGCATTCCGTGTGGAGTTCCTTTCCAGATTAGATTTGGCACTTCAATACTTATCAACATTAGTGAGAGAGCATCCAAGTTGGCCAGATACTGTTGTTGCACCTTCCAGAGCTATTTCACATATAAATGAGTGCGAGAATCATGAATATGTAAAAGTTCTTGGGAGTTTCCACCAGAAATTATACACAGCACTTCATCATTTGGAGCAGAAGTTTTCAGTGGTTCCTTTTCATCTCATCAGCATGGTCTTGCTCTCACTGTACAATCGTGGGCTATGGTTTGTTGGGTACGAAATATTACATGCATATACTTCTCAAGATCAAGATCTCAATAAAAGCCAAATAGTTAGATCCCTATTGTATCCTCTCATGCATAAGCAACTTTTGAAGGCTACCAGAGAAACTTCTCTTTTATTTTCACGCGTTATTGCTGCCTGCAGTATAACTTGCTCTAAACTGAAGTCAGATTGTTTAGAAAACAATGTGTCTGGTGAAAGTGGATCTTCAAGCTCAAACGCTTGGGGGTATTACTTTCAAGGTCTTATCCTGTCACTTCGGAGTTTAAGGAGTGCTTTGCAAATTATTTCTGTCTCATCTACTGAAGACCTCATCATGAAACCCCTTATCATCATTGATTGGATTGAGTATTATGTACAGTTTGCTTGTGCATGGCTTCAAACAAACTCAAAAGTTCTCTTCCAATTAATGCAACCACTTCTGATCACATTTACCAATGGGCATACACCTTATGAAGTTGATTTGATGGATCTGAAGAAAATCCTCCCCCAGATTGCAGAATCGGTGACCCAAAATTCTTTGACTGATAATGTATGCACAGGCCTTCAGGGTTCTCAAGGTACAGATGTAGCACATTTAATTCCAGAAGATGAAAGATGGCAGATCATAGGGGCTTGTTTATGGCAACACATATCCAGACTCATGAAACATAAGCTAGGTATGTTATCTTATAAACTTGATGAAGGCTGTATTTCTGGTGTTCCCGGCGGAAAACATTTCTCATCGGTGCCTTGCTGTATTTCTGGTGTTCCCGGCGGAAAACATTTCTCATCGGTGCCTTGCTCTGAGAATTTGGGTCCTGATGACAACAGAACTGAAGAACTGATTGGGTTGGTTTCATTGTCCTTGGTTAAGTTATTAAAGACCACACTTGGACATGTTTCTTCTTATCATGTGATGCGTCTAGCATCACATCTGCAGCATAAGATGGATAATGGGTTGCATGTAATGACTCTTGTTTGGTTAGAAGAATATAACCAGTCTCAGACCAGAGGCCTCAATCAGCATTTGAATCAGGACATTCTCAAATTGGAGACAATAGGTGAAAAACATGGATCTGACATATTATGGGATATCTGTGCAGATCCTAAAATAATATCTGAGAGTTTCACCCAGGAAAAAATATACTGGTCTCACTCCCTTGATCATAAACCGTCTAAAGGATGGAATAACATATATAGAGGCGTCACAACTGTAGATGAGACCGAGGAATCTCATAATCATGAACTTACACCTAAGAGTACTTCTGCCAGTAGTGAAGCTGGATTACCTTCTAGAAGTCTATTTCGCAGTGGCCACTCTTTCCTTAGCGGATGGCAGAAAGATACAACTGCTACAAAGGAGGTCTCACCTTTCCTGAATCCAAAAGAAATATATAAGAGAAATGGGGAGCTTTTGGAGGCATTGTGTCTCAACTCTGTTAATCAGAAACAAGCCGCTCTTGCAAGCAACCGAAAGGGCATCCTATTTTTTAATTGGAAAGATGATATGCCTGAGAGAGATCATTCAGACTTTATCTGGTCAGAGGCTGATTGGCCACTGAACGGGTGGGCTGGTTCTGAATCAACGCCAGCTCCAACATATGTATCTCCGGGTGTTGGTCTTGGAATCAAAAAAGGAACACACCTTGGACTGGGTGGAGCAACTGTTGGTGTAGGATCTTTGGCAAGGTCAGCAAGAGACTTGAGAGGTGGAGGAGCATTTGGGAATCAAGGTTATCCTGGAATGCGTGTGTCTGGTTTAGGTTGGGAGACTCGAGAGGACTTTGAGGAAGTTGTTGATCCACCACCTTCTGTTGAGAATGCAAACACAAGGGTTTTTTCCAGTCACCCATCAAGACCTTTCTTCTTGGTTGGTTCTAGCAATACACACATTTACTTATGGGAGTTTGGCAAAGACAAAGCTACTGCAACTTATGGAGTTCTGCCTGCTGCAAATGTCCCTCCACCTTATGCTCTTGCGTCGATATCTGCTTTGCAGTTTGATCACTGTGGACACAGATTTGCTACCGCTGCCTTAGATGGAACTGTATGCACATGGCAGCTGGAGGTGGGAGGAAGGAGTAATATTCGTCCTACAGAATCATCTCTATGCTTTAACAGTCATGCATCGGATGTTGCTTATGTGACATCAAGTGGATCAATCATTGCTGTGGCTGGATATAGCTCCAGTAGTGTTAATGTGGTCATATGGGATACATTGGCTCCACCTACTACCTCACGAGCTTCCATTATTTGTCATGAAGGTGGGACGCGCTCTCTTTCTGTTTTCGATAACGACATAGGAAGTGGATCTATTTCACCCCTTATTGTGACTGGTGGTAAAGGTGGTGATGTTGGACTTCACGACTTCCGGTATATTGCTACTGGAAGGAGTAAAAGGCAGAGGCATACTGATAAAGGTGAACAAGCTGTGAAGACATCATCAAATATTGATCATCATCCTGGGGATGGTAACAGATTTGGGGAACAAAATCAGAATGGGATGCTGTGGTATATACCAAAGGCTCACTCAGGGAGCGTCACCAAGATATCCACAATTCCAAATACCAGTTTGTTCTTAACGGGAAGCAAAGATGGAGATGTTAAGCTTTGGGATGCCAAGAGAGCTAAGCTGGTATATCACTGGCCAAAATTGCATGAAAGGCACACATTTTTGCAACCAAGCTCTCGAGGTTTTGGTGGAGTAGTTCAGGCTGCTGTCACCGACATAAAAGTTGTTTCACAAGGTTTTCTTACATGTGGTGGAGATGGAACTGTAAAGCTGGTTCACCTCAAAGACCACCAATATTAG

Protein Analysis

2589

Amino Acids

286.2

Weight (kDa)

6.29

Isoelectric Point (pI)

42.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rav1p_C PF12234 766 - 1514 9.5e-74 RAVE protein 1 C terminal
Beta-prop_THOC3 PF25174 2313 - 2545 9.9e-09 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1299, 4316, 5646
AarI CACCTGC 1 cut(s) 2492
Acc36I ACCTGC 2 cut(s) 286, 2492
Acc65I GGTACC 1 cut(s) 3068
AccB1I GGYRCC 5 cut(s) 215, 1732, 3068, 5701, 5749
AccB7I CCANNNNNTGG 4 cut(s) 174, 613, 960, 4400
AccBSI CCGCTC 2 cut(s) 4459, 6413
AccI GTMKAC 2 cut(s) 6, 1715
AccII CGCG 4 cut(s) 386, 899, 5100, 7228
AccIII TCCGGA 1 cut(s) 2030
AcoI YGGCCR 7 cut(s) 327, 381, 3394, 4760, 6268, 6509, 7601
AcuI CTGAAG 9 cut(s) 1318, 2459, 3896, 4206, 5156, 5298, 5468, 5504, 5811
AcyI GRCGYC 2 cut(s) 216, 6159
AdeI CACNNNGTG 1 cut(s) 960
AflIII ACRYGT 4 cut(s) 2691, 5098, 5851, 7712
AhlI ACTAGT 3 cut(s) 863, 1657, 2903
AjuI GAANNNNNNNTTGG 8 cut(s) 3416, 3448, 3735, 3767, 4639, 4671, 5784, 5816
AloI GAACNNNNNNTCC 2 cut(s) 1239, 1271
Alw21I GWGCWC 3 cut(s) 309, 431, 2989
Alw44I GTGCAC 1 cut(s) 2985
AlwNI CAGNNNCTG 7 cut(s) 1003, 1341, 1496, 3680, 4505, 4769, 6503
Ama87I CYCGRG 3 cut(s) 1221, 6729, 7644
Aor13HI TCCGGA 1 cut(s) 2030
ApaLI GTGCAC 1 cut(s) 2985
ArsI GACNNNNNNTTYG 4 cut(s) 1897, 1929, 2036, 2068
AseI ATTAAT 1 cut(s) 5381
Asp718I GGTACC 1 cut(s) 3068
AspLEI GCGC 4 cut(s) 218, 899, 3183, 7230
AsuC2I CCSGG 8 cut(s) 159, 182, 1222, 1223, 3238, 5679, 5727, 6567
AsuII TTCGAA 1 cut(s) 3572
AsuNHI GCTAGC 2 cut(s) 704, 4420
AvaI CYCGRG 3 cut(s) 1221, 6729, 7644
AxyI CCTNAGG 1 cut(s) 3891
BaeGI GKGCMC 2 cut(s) 1735, 2989
BaeI ACNNNNGTAYC 6 cut(s) 4758, 4791, 5526, 5559, 6543, 6576
BalI TGGCCA 5 cut(s) 3396, 4762, 6270, 6511, 7603
BamHI GGATCC 3 cut(s) 161, 2485, 3886
BanI GGYRCC 5 cut(s) 215, 1732, 3068, 5701, 5749
BanII GRGCYC 3 cut(s) 309, 431, 1503
BarI GAAGNNNNNNTAC 4 cut(s) 1746, 1778, 6225, 6257
BauI CACGAG 1 cut(s) 7194
BbsI GAAGAC 4 cut(s) 1244, 2904, 5286, 7397
Bbv12I GWGCWC 3 cut(s) 309, 431, 2989
BceAI ACGGC 5 cut(s) 229, 314, 323, 346, 1632
BcgI CGANNNNNNTGC 2 cut(s) 3398, 3432
BciVI GTATCC 2 cut(s) 5049, 7162
BclI TGATCA 7 cut(s) 943, 2245, 2542, 5397, 6118, 6958, 7408
BcnI CCSGG 8 cut(s) 159, 182, 1222, 1223, 3238, 5679, 5727, 6567
BcuI ACTAGT 3 cut(s) 863, 1657, 2903
BfmI CTRYAG 6 cut(s) 972, 4449, 5113, 5891, 6168, 7050
BfoI RGCGCY 1 cut(s) 219
BfuAI ACCTGC 2 cut(s) 286, 2492
BfuI GTATCC 2 cut(s) 5049, 7162
BglII AGATCT 2 cut(s) 4582, 5002
BlpI GCTNAGC 1 cut(s) 7584
BmcAI AGTACT 1 cut(s) 6217
BmeT110I CYCGRG 3 cut(s) 1221, 6729, 7644
BmrI ACTGGG 2 cut(s) 1202, 6617
BmtI GCTAGC 2 cut(s) 708, 4424
BmuI ACTGGG 2 cut(s) 1202, 6617
BpiI GAAGAC 4 cut(s) 1244, 2904, 5286, 7397
BpmI CTGGAG 7 cut(s) 89, 1800, 3503, 4094, 4301, 7040, 7126
Bpu10I CCTNAGC 2 cut(s) 930, 6281
Bpu1102I GCTNAGC 1 cut(s) 7584
Bpu14I TTCGAA 1 cut(s) 3572
BpuEI CTTGAG 4 cut(s) 2657, 4977, 5514, 6679
BpuMI CCSGG 8 cut(s) 159, 182, 1222, 1223, 3238, 5679, 5727, 6567
BsaAI YACGTR 1 cut(s) 3186
BsaBI GATNNNNATC 3 cut(s) 3676, 5001, 7413
BsaHI GRCGYC 2 cut(s) 216, 6159
BsaI GGTCTC 7 cut(s) 211, 622, 3051, 4409, 6111, 6170, 6325
BsaWI WCCGGW 3 cut(s) 2030, 3941, 7326
Bse118I RCCGGY 3 cut(s) 352, 2882, 4176
Bse21I CCTNAGG 1 cut(s) 3891
Bse3DI GCAATG 3 cut(s) 2703, 3902, 7119
Bse8I GATNNNNATC 3 cut(s) 3676, 5001, 7413
BseAI TCCGGA 1 cut(s) 2030
BseJI GATNNNNATC 3 cut(s) 3676, 5001, 7413
BseMI GCAATG 3 cut(s) 2703, 3902, 7119
BseRI GAGGAG 6 cut(s) 211, 218, 313, 2329, 3895, 6684
BseSI GKGCMC 2 cut(s) 1735, 2989
BseX3I CGGCCG 2 cut(s) 327, 381
BseYI CCCAGC 1 cut(s) 1496
BsgI GTGCAG 2 cut(s) 2526, 6075
Bsh1236I CGCG 4 cut(s) 386, 899, 5100, 7228
Bsh1285I CGRYCG 2 cut(s) 330, 384
BshNI GGYRCC 5 cut(s) 215, 1732, 3068, 5701, 5749
BsiEI CGRYCG 2 cut(s) 330, 384
BsiHKAI GWGCWC 3 cut(s) 309, 431, 2989
BsiHKCI CYCGRG 3 cut(s) 1221, 6729, 7644
BslFI GGGAC 7 cut(s) 267, 1281, 1785, 2763, 4603, 6899, 7237
BsmBI CGTCTC 1 cut(s) 369
BsmFI GGGAC 7 cut(s) 267, 1281, 1785, 2763, 4603, 6899, 7237
BsmI GAATGC 6 cut(s) 463, 1167, 4450, 4682, 6705, 6781
Bso31I GGTCTC 7 cut(s) 211, 622, 3051, 4409, 6111, 6170, 6325
BsoBI CYCGRG 3 cut(s) 1221, 6729, 7644
Bsp119I TTCGAA 1 cut(s) 3572
Bsp1286I GDGCHC 5 cut(s) 309, 431, 1503, 1735, 2989
Bsp13I TCCGGA 1 cut(s) 2030
Bsp1407I TGTACA 2 cut(s) 4938, 5329
Bsp1720I GCTNAGC 1 cut(s) 7584
Bsp19I CCATGG 2 cut(s) 78, 2351
BspEI TCCGGA 1 cut(s) 2030
BspFNI CGCG 4 cut(s) 386, 899, 5100, 7228
BspHI TCATGA 5 cut(s) 4819, 5289, 5616, 6196, 7213
BspMAI CTGCAG 2 cut(s) 5117, 5895
BspMI ACCTGC 2 cut(s) 286, 2492
BspOI GCTAGC 2 cut(s) 708, 4424
BspT104I TTCGAA 1 cut(s) 3572
BspT107I GGYRCC 5 cut(s) 215, 1732, 3068, 5701, 5749
BspTNI GGTCTC 7 cut(s) 211, 622, 3051, 4409, 6111, 6170, 6325
BsrBI CCGCTC 2 cut(s) 4459, 6413
BsrDI GCAATG 3 cut(s) 2703, 3902, 7119
BsrFI RCCGGY 3 cut(s) 352, 2882, 4176
BsrGI TGTACA 2 cut(s) 4938, 5329
BssAI RCCGGY 3 cut(s) 352, 2882, 4176
BssNAI GTATAC 1 cut(s) 1716
BssNI GRCGYC 2 cut(s) 216, 6159
BssSI CACGAG 1 cut(s) 7194
BssT1I CCWWGG 5 cut(s) 78, 2351, 4144, 5820, 6601
Bst1107I GTATAC 1 cut(s) 1716
Bst2BI CACGAG 1 cut(s) 7194
Bst6I CTCTTC 8 cut(s) 71, 780, 2478, 2962, 3226, 3872, 4008, 5378
BstACI GRCGYC 2 cut(s) 216, 6159
BstAPI GCANNNNNTGC 3 cut(s) 656, 2403, 3790
BstAUI TGTACA 2 cut(s) 4938, 5329
BstBAI YACGTR 1 cut(s) 3186
BstBI TTCGAA 1 cut(s) 3572
BstDSI CCRYGG 4 cut(s) 78, 339, 384, 2351
BstEII GGTNACC 1 cut(s) 5479
BstENI CCTNNNNNAGG 1 cut(s) 1863
BstFNI CGCG 4 cut(s) 386, 899, 5100, 7228
BstH2I RGCGCY 1 cut(s) 219
BstHHI GCGC 4 cut(s) 218, 899, 3183, 7230
BstMCI CGRYCG 2 cut(s) 330, 384
BstNSI RCATGY 9 cut(s) 854, 1778, 2611, 2695, 4324, 4982, 5855, 5921, 7716
BstPI GGTNACC 1 cut(s) 5479
BstSFI CTRYAG 6 cut(s) 972, 4449, 5113, 5891, 6168, 7050
BstSLI GKGCMC 2 cut(s) 1735, 2989
BstUI CGCG 4 cut(s) 386, 899, 5100, 7228
BstV2I GAAGAC 4 cut(s) 1244, 2904, 5286, 7397
BstXI CCANNNNNNTGG 1 cut(s) 734
BstZ17I GTATAC 1 cut(s) 1716
BstZI CGGCCG 2 cut(s) 327, 381
Bsu36I CCTNAGG 1 cut(s) 3891
BsuI GTATCC 2 cut(s) 5049, 7162
BtgI CCRYGG 4 cut(s) 78, 339, 384, 2351
BtgZI GCGATG 1 cut(s) 2127
BtsI GCAGTG 2 cut(s) 468, 6271
BveI ACCTGC 2 cut(s) 286, 2492
CaiI CAGNNNCTG 7 cut(s) 1003, 1341, 1496, 3680, 4505, 4769, 6503
CciI TCATGA 5 cut(s) 4819, 5289, 5616, 6196, 7213
CciNI GCGGCCGC 1 cut(s) 381
CfoI GCGC 4 cut(s) 218, 899, 3183, 7230
Cfr10I RCCGGY 3 cut(s) 352, 2882, 4176
Cfr42I CCGCGG 1 cut(s) 387
Cfr9I CCCGGG 1 cut(s) 1221
CseI GACGC 5 cut(s) 5864, 6148, 6924, 7234, 7483
CsiI ACCWGGT 1 cut(s) 1462
CspCI CAANNNNNGTGG 6 cut(s) 3267, 3302, 3716, 3751, 4659, 4694
DinI GGCGCC 1 cut(s) 217
DraI TTTAAA 1 cut(s) 592
DraIII CACNNNGTG 1 cut(s) 960
EaeI YGGCCR 7 cut(s) 327, 381, 3394, 4760, 6268, 6509, 7601
EagI CGGCCG 2 cut(s) 327, 381
Eam1104I CTCTTC 8 cut(s) 71, 780, 2478, 2962, 3226, 3872, 4008, 5378
EarI CTCTTC 8 cut(s) 71, 780, 2478, 2962, 3226, 3872, 4008, 5378
EciI GGCGGA 4 cut(s) 124, 154, 5697, 5745
Ecl136II GAGCTC 2 cut(s) 307, 429
EclXI CGGCCG 2 cut(s) 327, 381
Eco130I CCWWGG 5 cut(s) 78, 2351, 4144, 5820, 6601
Eco147I AGGCCT 2 cut(s) 5517, 5970
Eco24I GRGCYC 3 cut(s) 309, 431, 1503
Eco31I GGTCTC 7 cut(s) 211, 622, 3051, 4409, 6111, 6170, 6325
Eco32I GATATC 5 cut(s) 1675, 4603, 6049, 6942, 7506
Eco52I CGGCCG 2 cut(s) 327, 381
Eco53kI GAGCTC 2 cut(s) 307, 429
Eco57I CTGAAG 9 cut(s) 1318, 2459, 3896, 4206, 5156, 5298, 5468, 5504, 5811
Eco81I CCTNAGG 1 cut(s) 3891
Eco88I CYCGRG 3 cut(s) 1221, 6729, 7644
Eco91I GGTNACC 1 cut(s) 5479
EcoICRI GAGCTC 2 cut(s) 307, 429
EcoNI CCTNNNNNAGG 1 cut(s) 1863
EcoO109I RGGNCCY 7 cut(s) 641, 1079, 2234, 2387, 2750, 3145, 5771
EcoO65I GGTNACC 1 cut(s) 5479
EcoRI GAATTC 3 cut(s) 3927, 4629, 4651
EcoRV GATATC 5 cut(s) 1675, 4603, 6049, 6942, 7506
EcoT14I CCWWGG 5 cut(s) 78, 2351, 4144, 5820, 6601
EcoT22I ATGCAT 3 cut(s) 4984, 5052, 7084
EcoT38I GRGCYC 3 cut(s) 309, 431, 1503
EgeI GGCGCC 1 cut(s) 217
EheI GGCGCC 1 cut(s) 217
ErhI CCWWGG 5 cut(s) 78, 2351, 4144, 5820, 6601
Esp3I CGTCTC 1 cut(s) 369
FaqI GGGAC 7 cut(s) 267, 1281, 1785, 2763, 4603, 6899, 7237
FauI CCCGC 2 cut(s) 162, 1069
FauNDI CATATG 3 cut(s) 4048, 6556, 7163
FbaI TGATCA 7 cut(s) 943, 2245, 2542, 5397, 6118, 6958, 7408
FblI GTMKAC 2 cut(s) 6, 1715
FriOI GRGCYC 3 cut(s) 309, 431, 1503
GlaI GCGC 4 cut(s) 217, 898, 3182, 7229
GsaI CCCAGC 1 cut(s) 1500
GsuI CTGGAG 7 cut(s) 89, 1800, 3503, 4094, 4301, 7040, 7126
HaeII RGCGCY 1 cut(s) 219
HgaI GACGC 5 cut(s) 5864, 6148, 6924, 7234, 7483
HhaI GCGC 4 cut(s) 218, 899, 3183, 7230
Hin1I GRCGYC 2 cut(s) 216, 6159
Hin6I GCGC 4 cut(s) 216, 897, 3181, 7228
HinP1I GCGC 4 cut(s) 216, 897, 3181, 7228
HincII GTYRAC 4 cut(s) 693, 3294, 3466, 3700
HindII GTYRAC 4 cut(s) 693, 3294, 3466, 3700
HindIII AAGCTT 3 cut(s) 1685, 4536, 7562
Hpy99I CGWCG 1 cut(s) 6940
HpyCH4IV ACGT 3 cut(s) 1229, 1270, 3185
HpySE526I ACGT 3 cut(s) 1229, 1270, 3185
Hsp92I GRCGYC 2 cut(s) 216, 6159
HspAI GCGC 4 cut(s) 216, 897, 3181, 7228
KasI GGCGCC 1 cut(s) 215
KflI GGGWCCC 1 cut(s) 2750
Kpn2I TCCGGA 1 cut(s) 2030
KpnI GGTACC 1 cut(s) 3072
KroI GCCGGC 1 cut(s) 4176
KroNI GCCGGC 1 cut(s) 4178
Ksp22I TGATCA 7 cut(s) 943, 2245, 2542, 5397, 6118, 6958, 7408
KspI CCGCGG 1 cut(s) 387
MabI ACCWGGT 1 cut(s) 1462
MaeII ACGT 3 cut(s) 1229, 1270, 3185
MbiI CCGCTC 2 cut(s) 4459, 6413
MfeI CAATTG 4 cut(s) 492, 3050, 3833, 4245
MhlI GDGCHC 5 cut(s) 309, 431, 1503, 1735, 2989
MlsI TGGCCA 5 cut(s) 3396, 4762, 6270, 6511, 7603
MluI ACGCGT 1 cut(s) 5098
MluNI TGGCCA 5 cut(s) 3396, 4762, 6270, 6511, 7603
Mly113I GGCGCC 1 cut(s) 216
MlyI GAGTC 9 cut(s) 2, 3332, 3383, 3404, 3695, 4253, 5607, 5920, 6721
Mox20I TGGCCA 5 cut(s) 3396, 4762, 6270, 6511, 7603
Mph1103I ATGCAT 3 cut(s) 4984, 5052, 7084
MroI TCCGGA 1 cut(s) 2030
MroNI GCCGGC 1 cut(s) 4176
MscI TGGCCA 5 cut(s) 3396, 4762, 6270, 6511, 7603
MslI CAYNNNNRTG 9 cut(s) 1815, 3207, 4803, 4824, 4919, 6195, 7063, 7124, 7218
Msp20I TGGCCA 5 cut(s) 3396, 4762, 6270, 6511, 7603
MspA1I CMGCKG 6 cut(s) 386, 1493, 2765, 4031, 6986, 7018
MunI CAATTG 4 cut(s) 492, 3050, 3833, 4245
Mva1269I GAATGC 6 cut(s) 463, 1167, 4450, 4682, 6705, 6781
MvnI CGCG 4 cut(s) 386, 899, 5100, 7228
NaeI GCCGGC 1 cut(s) 4178
NarI GGCGCC 1 cut(s) 216
NciI CCSGG 8 cut(s) 159, 182, 1222, 1223, 3238, 5679, 5727, 6567
NcoI CCATGG 2 cut(s) 78, 2351
NdeI CATATG 3 cut(s) 4048, 6556, 7163
NgoMIV GCCGGC 1 cut(s) 4176
NheI GCTAGC 2 cut(s) 704, 4420
NmeAIII GCCGAG 1 cut(s) 305
NotI GCGGCCGC 1 cut(s) 381
NsiI ATGCAT 3 cut(s) 4984, 5052, 7084
NspI RCATGY 9 cut(s) 854, 1778, 2611, 2695, 4324, 4982, 5855, 5921, 7716
NspV TTCGAA 1 cut(s) 3572
PaeI GCATGC 2 cut(s) 2611, 4324
PaeR7I CTCGAG 2 cut(s) 6729, 7644
PagI TCATGA 5 cut(s) 4819, 5289, 5616, 6196, 7213
PaqCI CACCTGC 1 cut(s) 2492
PceI AGGCCT 2 cut(s) 5517, 5970
PciI ACATGT 3 cut(s) 2691, 5851, 7712
PctI GAATGC 6 cut(s) 463, 1167, 4450, 4682, 6705, 6781
PdiI GCCGGC 1 cut(s) 4178
PflFI GACNNNGTC 1 cut(s) 505
PflMI CCANNNNNTGG 4 cut(s) 174, 613, 960, 4400
PfoI TCCNGGA 5 cut(s) 180, 1156, 1257, 3236, 6694
PleI GAGTC 9 cut(s) 2, 3331, 3383, 3404, 3695, 4253, 5607, 5920, 6721
PluTI GGCGCC 1 cut(s) 219
PpsI GAGTC 9 cut(s) 2, 3331, 3383, 3404, 3695, 4253, 5607, 5920, 6721
Ppu21I YACGTR 1 cut(s) 3186
PpuMI RGGWCCY 4 cut(s) 641, 2234, 2750, 5771
PscI ACATGT 3 cut(s) 2691, 5851, 7712
PshBI ATTAAT 1 cut(s) 5381
PsiI TTATAA 3 cut(s) 1299, 4316, 5646
Psp124BI GAGCTC 2 cut(s) 309, 431
Psp5II RGGWCCY 4 cut(s) 641, 2234, 2750, 5771
PspEI GGTNACC 1 cut(s) 5479
PspFI CCCAGC 1 cut(s) 1496
PspPPI RGGWCCY 4 cut(s) 641, 2234, 2750, 5771
PsrI GAACNNNNNNTAC 2 cut(s) 7725, 7757
PstI CTGCAG 2 cut(s) 5117, 5895
PstNI CAGNNNCTG 7 cut(s) 1003, 1341, 1496, 3680, 4505, 4769, 6503
PsyI GACNNNGTC 1 cut(s) 505
PvuII CAGCTG 4 cut(s) 1493, 2765, 4031, 7018
RseI CAYNNNNRTG 9 cut(s) 1815, 3207, 4803, 4824, 4919, 6195, 7063, 7124, 7218
SacI GAGCTC 2 cut(s) 309, 431
SacII CCGCGG 1 cut(s) 387
ScaI AGTACT 1 cut(s) 6217
SchI GAGTC 9 cut(s) 2, 3332, 3383, 3404, 3695, 4253, 5607, 5920, 6721
SduI GDGCHC 5 cut(s) 309, 431, 1503, 1735, 2989
SexAI ACCWGGT 1 cut(s) 1462
SfcI CTRYAG 6 cut(s) 972, 4449, 5113, 5891, 6168, 7050
SfoI GGCGCC 1 cut(s) 217
Sfr274I CTCGAG 2 cut(s) 6729, 7644
Sfr303I CCGCGG 1 cut(s) 387
SfuI TTCGAA 1 cut(s) 3572
SgrBI CCGCGG 1 cut(s) 387
SlaI CTCGAG 2 cut(s) 6729, 7644
SmaI CCCGGG 1 cut(s) 1223
SmiMI CAYNNNNRTG 9 cut(s) 1815, 3207, 4803, 4824, 4919, 6195, 7063, 7124, 7218
SmlI CTYRAG 6 cut(s) 2636, 4992, 5529, 6658, 6729, 7644
SmoI CTYRAG 6 cut(s) 2636, 4992, 5529, 6658, 6729, 7644
SpeI ACTAGT 3 cut(s) 863, 1657, 2903
SphI GCATGC 2 cut(s) 2611, 4324
SseBI AGGCCT 2 cut(s) 5517, 5970
SspDI GGCGCC 1 cut(s) 215
SspI AATATT 4 cut(s) 4974, 7042, 7405, 7763
SstI GAGCTC 2 cut(s) 309, 431
StuI AGGCCT 2 cut(s) 5517, 5970
StyI CCWWGG 5 cut(s) 78, 2351, 4144, 5820, 6601
TaiI ACGT 3 cut(s) 1232, 1273, 3188
TaqII GACCGA 3 cut(s) 269, 1142, 6194
TatI WGTACW 4 cut(s) 1546, 4938, 5329, 6215
TauI GCSGC 4 cut(s) 383, 386, 389, 6413
TspGWI ACGGA 3 cut(s) 924, 3628, 4676
TspMI CCCGGG 1 cut(s) 1221
Tth111I GACNNNGTC 1 cut(s) 505
Van91I CCANNNNNTGG 4 cut(s) 174, 613, 960, 4400
VneI GTGCAC 1 cut(s) 2985
VspI ATTAAT 1 cut(s) 5381
XagI CCTNNNNNAGG 1 cut(s) 1863
XbaI TCTAGA 1 cut(s) 6248
XceI RCATGY 9 cut(s) 854, 1778, 2611, 2695, 4324, 4982, 5855, 5921, 7716
XcmI CCANNNNNNNNNTGG 4 cut(s) 1004, 1639, 4711, 6519
XhoI CTCGAG 2 cut(s) 6729, 7644
XmaI CCCGGG 1 cut(s) 1221
XmiI GTMKAC 2 cut(s) 6, 1715
ZrmI AGTACT 1 cut(s) 6217
Zsp2I ATGCAT 3 cut(s) 4984, 5052, 7084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.