RAVE protein 1 C terminal
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46560 AT2G46560 AT2G46560 |
| fragaria_vesca | FvH4_7g16880 FvH4_7g16880 FvH4_7g16880 FvH4_7g16880 |
| malus_domestica | MD01G1083800.v1.1 |
| prunus_persica | Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0360111 |
| rosa_laevigata | RLG00000018213 RLG00000027832 |
| rosa_multiflora | Rmu_co8378581.1_g000001 Rmu_co8408019.1_g000001 Rmu_sc0007813.1_g000007 Rmu_ssc0000368.1_g000041 |
| rosa_roxburghii | Rroxscaffold_4G00296380 |
| rosa_rugosa | Rorug01G0275200 Rorug01G0275300 |
| rosa_samantha | Rh1AG289000 Rh1BG254500 Rh1CG272000 Rh1DG283600 |
| rosa_wichuraiana | Rw1G025630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1215 |
| AarI | CACCTGC | 2 cut(s) | 4383, 6115 |
| Acc36I | ACCTGC | 3 cut(s) | 504, 4383, 6115 |
| Acc65I | GGTACC | 1 cut(s) | 7289 |
| AccB1I | GGYRCC | 4 cut(s) | 1648, 5024, 6146, 7289 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 4313, 6380 |
| AccBSI | CCGCTC | 1 cut(s) | 3252 |
| AccI | GTMKAC | 4 cut(s) | 12, 2624, 2887, 5584 |
| AccII | CGCG | 4 cut(s) | 335, 1156, 4421, 5016 |
| AclI | AACGTT | 1 cut(s) | 4311 |
| AcoI | YGGCCR | 4 cut(s) | 372, 6130, 6371, 7463 |
| AcuI | CTGAAG | 8 cut(s) | 2010, 2975, 4719, 5072, 5214, 5414, 6114, 7631 |
| AcvI | CACGTG | 2 cut(s) | 798, 3914 |
| AcyI | GRCGYC | 1 cut(s) | 7434 |
| AflII | CTTAAG | 1 cut(s) | 5687 |
| AflIII | ACRYGT | 7 cut(s) | 667, 797, 4709, 5014, 5713, 5898, 6416 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 271 |
| AhlI | ACTAGT | 2 cut(s) | 1004, 1811 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1267, 1299, 3648, 3680 |
| Alw21I | GWGCWC | 4 cut(s) | 258, 1987, 6460, 7090 |
| Alw26I | GTCTC | 9 cut(s) | 295, 571, 1141, 1501, 3970, 4117, 5973, 6251, 7561 |
| Alw44I | GTGCAC | 2 cut(s) | 6456, 7086 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 937, 2506, 2722, 6365, 6629 |
| Ama87I | CYCGRG | 2 cut(s) | 1249, 7506 |
| ApaI | GGGCCC | 1 cut(s) | 2666 |
| ApaLI | GTGCAC | 2 cut(s) | 6456, 7086 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 578, 610, 3516, 3548, 5618, 5650 |
| AseI | ATTAAT | 1 cut(s) | 873 |
| Asp718I | GGTACC | 1 cut(s) | 7289 |
| AspLEI | GCGC | 1 cut(s) | 806 |
| AsuC2I | CCSGG | 3 cut(s) | 108, 2121, 2771 |
| AsuNHI | GCTAGC | 4 cut(s) | 325, 641, 4333, 5740 |
| AvaI | CYCGRG | 2 cut(s) | 1249, 7506 |
| BaeGI | GKGCMC | 4 cut(s) | 1651, 2666, 6460, 7090 |
| BalI | TGGCCA | 2 cut(s) | 6132, 6373 |
| BanI | GGYRCC | 4 cut(s) | 1648, 5024, 6146, 7289 |
| BanII | GRGCYC | 6 cut(s) | 258, 458, 2666, 2950, 5833, 6497 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3071, 3103 |
| BbrPI | CACGTG | 2 cut(s) | 798, 3914 |
| BbsI | GAAGAC | 3 cut(s) | 1178, 5420, 7259 |
| Bbv12I | GWGCWC | 4 cut(s) | 258, 1987, 6460, 7090 |
| BbvCI | CCTCAGC | 2 cut(s) | 22, 5949 |
| BceAI | ACGGC | 5 cut(s) | 11, 272, 1548, 2691, 4794 |
| BciVI | GTATCC | 5 cut(s) | 2434, 4483, 4715, 4889, 7024 |
| BclI | TGATCA | 3 cut(s) | 2833, 5313, 6259 |
| BcnI | CCSGG | 3 cut(s) | 108, 2121, 2771 |
| BcoDI | GTCTC | 9 cut(s) | 295, 571, 1141, 1501, 3970, 4117, 5973, 6251, 7561 |
| BcuI | ACTAGT | 2 cut(s) | 1004, 1811 |
| BfmI | CTRYAG | 6 cut(s) | 603, 906, 2193, 5753, 6030, 6912 |
| BfrI | CTTAAG | 1 cut(s) | 5687 |
| BfuAI | ACCTGC | 3 cut(s) | 504, 4383, 6115 |
| BfuI | GTATCC | 5 cut(s) | 2434, 4483, 4715, 4889, 7024 |
| BglII | AGATCT | 5 cut(s) | 2461, 3460, 4513, 5093, 5197 |
| BmcAI | AGTACT | 3 cut(s) | 414, 2383, 6091 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 271 |
| BmeT110I | CYCGRG | 2 cut(s) | 1249, 7506 |
| BmrI | ACTGGG | 2 cut(s) | 1395, 6479 |
| BmtI | GCTAGC | 4 cut(s) | 329, 645, 4337, 5744 |
| BmuI | ACTGGG | 2 cut(s) | 1395, 6479 |
| BpiI | GAAGAC | 3 cut(s) | 1178, 5420, 7259 |
| BpmI | CTGGAG | 3 cut(s) | 1716, 4625, 6902 |
| Bpu10I | CCTNAGC | 3 cut(s) | 22, 457, 5949 |
| BpuEI | CTTGAG | 5 cut(s) | 1660, 5348, 5424, 5698, 6576 |
| BpuMI | CCSGG | 3 cut(s) | 108, 2121, 2771 |
| Bsa29I | ATCGAT | 1 cut(s) | 2167 |
| BsaAI | YACGTR | 3 cut(s) | 798, 3212, 3914 |
| BsaBI | GATNNNNATC | 4 cut(s) | 963, 3589, 4948, 7275 |
| BsaHI | GRCGYC | 1 cut(s) | 7434 |
| BsaI | GGTCTC | 2 cut(s) | 571, 5973 |
| BsaWI | WCCGGW | 2 cut(s) | 2882, 7188 |
| Bse118I | RCCGGY | 1 cut(s) | 476 |
| Bse3DI | GCAATG | 7 cut(s) | 447, 2616, 3090, 3815, 5144, 6981, 7194 |
| Bse8I | GATNNNNATC | 4 cut(s) | 963, 3589, 4948, 7275 |
| BseCI | ATCGAT | 1 cut(s) | 2167 |
| BseJI | GATNNNNATC | 4 cut(s) | 963, 3589, 4948, 7275 |
| BseMI | GCAATG | 7 cut(s) | 447, 2616, 3090, 3815, 5144, 6981, 7194 |
| BseRI | GAGGAG | 7 cut(s) | 69, 160, 2242, 3614, 3941, 5176, 6620 |
| BseSI | GKGCMC | 4 cut(s) | 1651, 2666, 6460, 7090 |
| BseYI | CCCAGC | 2 cut(s) | 4204, 4671 |
| BsgI | GTGCAG | 2 cut(s) | 2503, 6258 |
| Bsh1236I | CGCG | 4 cut(s) | 335, 1156, 4421, 5016 |
| Bsh1285I | CGRYCG | 1 cut(s) | 318 |
| BshNI | GGYRCC | 4 cut(s) | 1648, 5024, 6146, 7289 |
| BshVI | ATCGAT | 1 cut(s) | 2167 |
| BsiEI | CGRYCG | 1 cut(s) | 318 |
| BsiHKAI | GWGCWC | 4 cut(s) | 258, 1987, 6460, 7090 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1249, 7506 |
| BsiSI | CCGG | 8 cut(s) | 108, 131, 261, 477, 2120, 2771, 2883, 7189 |
| BslFI | GGGAC | 9 cut(s) | 283, 1215, 1701, 1791, 2411, 2437, 6279, 6761, 7445 |
| BsmAI | GTCTC | 9 cut(s) | 295, 571, 1141, 1501, 3970, 4117, 5973, 6251, 7561 |
| BsmBI | CGTCTC | 1 cut(s) | 295 |
| BsmFI | GGGAC | 9 cut(s) | 283, 1215, 1701, 1791, 2411, 2437, 6279, 6761, 7445 |
| BsmI | GAATGC | 8 cut(s) | 412, 1930, 3961, 4363, 4522, 6643, 7225, 7326 |
| Bso31I | GGTCTC | 2 cut(s) | 571, 5973 |
| BsoBI | CYCGRG | 2 cut(s) | 1249, 7506 |
| Bsp120I | GGGCCC | 1 cut(s) | 2662 |
| Bsp1407I | TGTACA | 3 cut(s) | 418, 4773, 5245 |
| Bsp19I | CCATGG | 1 cut(s) | 2264 |
| BspDI | ATCGAT | 1 cut(s) | 2167 |
| BspFNI | CGCG | 4 cut(s) | 335, 1156, 4421, 5016 |
| BspHI | TCATGA | 6 cut(s) | 4732, 5526, 6058, 7075, 7180, 7248 |
| BspMAI | CTGCAG | 2 cut(s) | 607, 5757 |
| BspMI | ACCTGC | 3 cut(s) | 504, 4383, 6115 |
| BspOI | GCTAGC | 4 cut(s) | 329, 645, 4337, 5744 |
| BspT107I | GGYRCC | 4 cut(s) | 1648, 5024, 6146, 7289 |
| BspTI | CTTAAG | 1 cut(s) | 5687 |
| BspTNI | GGTCTC | 2 cut(s) | 571, 5973 |
| BsrBI | CCGCTC | 1 cut(s) | 3252 |
| BsrDI | GCAATG | 7 cut(s) | 447, 2616, 3090, 3815, 5144, 6981, 7194 |
| BsrFI | RCCGGY | 1 cut(s) | 476 |
| BsrGI | TGTACA | 3 cut(s) | 418, 4773, 5245 |
| BssAI | RCCGGY | 1 cut(s) | 476 |
| BssNAI | GTATAC | 2 cut(s) | 2888, 5585 |
| BssNI | GRCGYC | 1 cut(s) | 7434 |
| BssT1I | CCWWGG | 7 cut(s) | 1314, 2264, 4057, 4387, 6142, 6463, 6852 |
| Bst1107I | GTATAC | 2 cut(s) | 2888, 5585 |
| Bst6I | CTCTTC | 2 cut(s) | 2863, 6508 |
| BstACI | GRCGYC | 1 cut(s) | 7434 |
| BstAFI | CTTAAG | 1 cut(s) | 5687 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 3703, 5717 |
| BstAUI | TGTACA | 3 cut(s) | 418, 4773, 5245 |
| BstBAI | YACGTR | 3 cut(s) | 798, 3212, 3914 |
| BstDSI | CCRYGG | 4 cut(s) | 27, 333, 1154, 2264 |
| BstEII | GGTNACC | 2 cut(s) | 1159, 5908 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1779, 6173, 6502 |
| BstFNI | CGCG | 4 cut(s) | 335, 1156, 4421, 5016 |
| BstHHI | GCGC | 1 cut(s) | 806 |
| BstMAI | GTCTC | 9 cut(s) | 295, 571, 1141, 1501, 3970, 4117, 5973, 6251, 7561 |
| BstMCI | CGRYCG | 1 cut(s) | 318 |
| BstPI | GGTNACC | 2 cut(s) | 1159, 5908 |
| BstSFI | CTRYAG | 6 cut(s) | 603, 906, 2193, 5753, 6030, 6912 |
| BstSLI | GKGCMC | 4 cut(s) | 1651, 2666, 6460, 7090 |
| BstUI | CGCG | 4 cut(s) | 335, 1156, 4421, 5016 |
| BstV2I | GAAGAC | 3 cut(s) | 1178, 5420, 7259 |
| BstX2I | RGATCY | 9 cut(s) | 2074, 2461, 3020, 3460, 3799, 4513, 4691, 5093, 5197 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 671 |
| BstYI | RGATCY | 9 cut(s) | 2074, 2461, 3020, 3460, 3799, 4513, 4691, 5093, 5197 |
| BstZ17I | GTATAC | 2 cut(s) | 2888, 5585 |
| Bsu15I | ATCGAT | 1 cut(s) | 2167 |
| BsuI | GTATCC | 5 cut(s) | 2434, 4483, 4715, 4889, 7024 |
| BsuTUI | ATCGAT | 1 cut(s) | 2167 |
| BtgI | CCRYGG | 4 cut(s) | 27, 333, 1154, 2264 |
| BtgZI | GCGATG | 1 cut(s) | 4077 |
| BveI | ACCTGC | 3 cut(s) | 504, 4383, 6115 |
| CaiI | CAGNNNCTG | 5 cut(s) | 937, 2506, 2722, 6365, 6629 |
| CciI | TCATGA | 6 cut(s) | 4732, 5526, 6058, 7075, 7180, 7248 |
| CfoI | GCGC | 1 cut(s) | 806 |
| Cfr10I | RCCGGY | 1 cut(s) | 476 |
| Cfr42I | CCGCGG | 2 cut(s) | 336, 1157 |
| ClaI | ATCGAT | 1 cut(s) | 2167 |
| CseI | GACGC | 3 cut(s) | 2610, 6558, 7442 |
| CsiI | ACCWGGT | 2 cut(s) | 1057, 1303 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 967, 1002, 3629, 3664, 4572, 4607 |
| DraI | TTTAAA | 1 cut(s) | 541 |
| DriI | GACNNNNNGTC | 1 cut(s) | 271 |
| EaeI | YGGCCR | 4 cut(s) | 372, 6130, 6371, 7463 |
| Eam1104I | CTCTTC | 2 cut(s) | 2863, 6508 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 271 |
| EarI | CTCTTC | 2 cut(s) | 2863, 6508 |
| EciI | GGCGGA | 1 cut(s) | 7170 |
| Ecl136II | GAGCTC | 1 cut(s) | 256 |
| Eco130I | CCWWGG | 7 cut(s) | 1314, 2264, 4057, 4387, 6142, 6463, 6852 |
| Eco24I | GRGCYC | 6 cut(s) | 258, 458, 2666, 2950, 5833, 6497 |
| Eco31I | GGTCTC | 2 cut(s) | 571, 5973 |
| Eco32I | GATATC | 2 cut(s) | 5934, 7368 |
| Eco53kI | GAGCTC | 1 cut(s) | 256 |
| Eco57I | CTGAAG | 8 cut(s) | 2010, 2975, 4719, 5072, 5214, 5414, 6114, 7631 |
| Eco72I | CACGTG | 2 cut(s) | 798, 3914 |
| Eco88I | CYCGRG | 2 cut(s) | 1249, 7506 |
| Eco91I | GGTNACC | 2 cut(s) | 1159, 5908 |
| EcoICRI | GAGCTC | 1 cut(s) | 256 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1779, 6173, 6502 |
| EcoO109I | RGGNCCY | 6 cut(s) | 230, 2300, 2398, 2662, 2663, 3046 |
| EcoO65I | GGTNACC | 2 cut(s) | 1159, 5908 |
| EcoRI | GAATTC | 2 cut(s) | 3349, 3840 |
| EcoRV | GATATC | 2 cut(s) | 5934, 7368 |
| EcoT14I | CCWWGG | 7 cut(s) | 1314, 2264, 4057, 4387, 6142, 6463, 6852 |
| EcoT22I | ATGCAT | 4 cut(s) | 2997, 3961, 4968, 6946 |
| EcoT38I | GRGCYC | 6 cut(s) | 258, 458, 2666, 2950, 5833, 6497 |
| ErhI | CCWWGG | 7 cut(s) | 1314, 2264, 4057, 4387, 6142, 6463, 6852 |
| Esp3I | CGTCTC | 1 cut(s) | 295 |
| FaqI | GGGAC | 9 cut(s) | 283, 1215, 1701, 1791, 2411, 2437, 6279, 6761, 7445 |
| FauI | CCCGC | 2 cut(s) | 91, 1149 |
| FauNDI | CATATG | 6 cut(s) | 1795, 3502, 3961, 4954, 5257, 6011 |
| FbaI | TGATCA | 3 cut(s) | 2833, 5313, 6259 |
| FblI | GTMKAC | 4 cut(s) | 12, 2624, 2887, 5584 |
| FriOI | GRGCYC | 6 cut(s) | 258, 458, 2666, 2950, 5833, 6497 |
| GlaI | GCGC | 1 cut(s) | 805 |
| GsaI | CCCAGC | 2 cut(s) | 4208, 4675 |
| GsuI | CTGGAG | 3 cut(s) | 1716, 4625, 6902 |
| HapII | CCGG | 8 cut(s) | 108, 131, 261, 477, 2120, 2771, 2883, 7189 |
| HgaI | GACGC | 3 cut(s) | 2610, 6558, 7442 |
| HhaI | GCGC | 1 cut(s) | 806 |
| Hin1I | GRCGYC | 1 cut(s) | 7434 |
| Hin6I | GCGC | 1 cut(s) | 804 |
| HinP1I | GCGC | 1 cut(s) | 804 |
| HincII | GTYRAC | 4 cut(s) | 586, 630, 3613, 4939 |
| HindII | GTYRAC | 4 cut(s) | 586, 630, 3613, 4939 |
| HindIII | AAGCTT | 5 cut(s) | 1636, 4449, 7295, 7424, 7598 |
| HpaII | CCGG | 8 cut(s) | 108, 131, 261, 477, 2120, 2771, 2883, 7189 |
| Hpy99I | CGWCG | 1 cut(s) | 277 |
| HpyCH4IV | ACGT | 7 cut(s) | 9, 575, 667, 797, 3211, 3913, 4311 |
| HpySE526I | ACGT | 7 cut(s) | 9, 575, 667, 797, 3211, 3913, 4311 |
| Hsp92I | GRCGYC | 1 cut(s) | 7434 |
| HspAI | GCGC | 1 cut(s) | 804 |
| KflI | GGGWCCC | 1 cut(s) | 2398 |
| KpnI | GGTACC | 1 cut(s) | 7293 |
| Ksp22I | TGATCA | 3 cut(s) | 2833, 5313, 6259 |
| KspI | CCGCGG | 2 cut(s) | 336, 1157 |
| MabI | ACCWGGT | 2 cut(s) | 1057, 1303 |
| MaeII | ACGT | 7 cut(s) | 9, 575, 667, 797, 3211, 3913, 4311 |
| MbiI | CCGCTC | 1 cut(s) | 3252 |
| MfeI | CAATTG | 3 cut(s) | 3746, 4158, 4573 |
| MflI | RGATCY | 9 cut(s) | 2074, 2461, 3020, 3460, 3799, 4513, 4691, 5093, 5197 |
| MlsI | TGGCCA | 2 cut(s) | 6132, 6373 |
| MluI | ACGCGT | 1 cut(s) | 5014 |
| MluNI | TGGCCA | 2 cut(s) | 6132, 6373 |
| MlyI | GAGTC | 7 cut(s) | 1410, 3317, 3608, 5353, 5517, 5782, 6926 |
| Mox20I | TGGCCA | 2 cut(s) | 6132, 6373 |
| Mph1103I | ATGCAT | 4 cut(s) | 2997, 3961, 4968, 6946 |
| MscI | TGGCCA | 2 cut(s) | 6132, 6373 |
| MslI | CAYNNNNRTG | 8 cut(s) | 109, 1731, 2085, 2091, 3108, 4737, 6925, 7080 |
| Msp20I | TGGCCA | 2 cut(s) | 6132, 6373 |
| MspA1I | CMGCKG | 7 cut(s) | 335, 914, 1156, 1409, 3416, 3944, 6880 |
| MspCI | CTTAAG | 1 cut(s) | 5687 |
| MspI | CCGG | 8 cut(s) | 108, 131, 261, 477, 2120, 2771, 2883, 7189 |
| MunI | CAATTG | 3 cut(s) | 3746, 4158, 4573 |
| Mva1269I | GAATGC | 8 cut(s) | 412, 1930, 3961, 4363, 4522, 6643, 7225, 7326 |
| MvnI | CGCG | 4 cut(s) | 335, 1156, 4421, 5016 |
| NciI | CCSGG | 3 cut(s) | 108, 2121, 2771 |
| NcoI | CCATGG | 1 cut(s) | 2264 |
| NdeI | CATATG | 6 cut(s) | 1795, 3502, 3961, 4954, 5257, 6011 |
| NheI | GCTAGC | 4 cut(s) | 325, 641, 4333, 5740 |
| NmeAIII | GCCGAG | 1 cut(s) | 1381 |
| NsiI | ATGCAT | 4 cut(s) | 2997, 3961, 4968, 6946 |
| PaeR7I | CTCGAG | 2 cut(s) | 1249, 7506 |
| PagI | TCATGA | 6 cut(s) | 4732, 5526, 6058, 7075, 7180, 7248 |
| PaqCI | CACCTGC | 2 cut(s) | 4383, 6115 |
| PciI | ACATGT | 4 cut(s) | 4709, 5713, 5898, 6416 |
| PctI | GAATGC | 8 cut(s) | 412, 1930, 3961, 4363, 4522, 6643, 7225, 7326 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 4313, 6380 |
| Ple19I | CGATCG | 1 cut(s) | 318 |
| PleI | GAGTC | 7 cut(s) | 1410, 3317, 3608, 5353, 5517, 5782, 6925 |
| PmaCI | CACGTG | 2 cut(s) | 798, 3914 |
| PmlI | CACGTG | 2 cut(s) | 798, 3914 |
| PpsI | GAGTC | 7 cut(s) | 1410, 3317, 3608, 5353, 5517, 5782, 6925 |
| Ppu21I | YACGTR | 3 cut(s) | 798, 3212, 3914 |
| PpuMI | RGGWCCY | 3 cut(s) | 230, 2300, 2398 |
| PscI | ACATGT | 4 cut(s) | 4709, 5713, 5898, 6416 |
| PshBI | ATTAAT | 1 cut(s) | 873 |
| PsiI | TTATAA | 1 cut(s) | 1215 |
| Psp124BI | GAGCTC | 1 cut(s) | 258 |
| Psp1406I | AACGTT | 1 cut(s) | 4311 |
| Psp5II | RGGWCCY | 3 cut(s) | 230, 2300, 2398 |
| PspCI | CACGTG | 2 cut(s) | 798, 3914 |
| PspEI | GGTNACC | 2 cut(s) | 1159, 5908 |
| PspFI | CCCAGC | 2 cut(s) | 4204, 4671 |
| PspOMI | GGGCCC | 1 cut(s) | 2662 |
| PspPPI | RGGWCCY | 3 cut(s) | 230, 2300, 2398 |
| PspXI | VCTCGAGB | 1 cut(s) | 7506 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 7587, 7619 |
| PstI | CTGCAG | 2 cut(s) | 607, 5757 |
| PstNI | CAGNNNCTG | 5 cut(s) | 937, 2506, 2722, 6365, 6629 |
| PsuI | RGATCY | 9 cut(s) | 2074, 2461, 3020, 3460, 3799, 4513, 4691, 5093, 5197 |
| PvuI | CGATCG | 1 cut(s) | 318 |
| PvuII | CAGCTG | 3 cut(s) | 1409, 3944, 6880 |
| RseI | CAYNNNNRTG | 8 cut(s) | 109, 1731, 2085, 2091, 3108, 4737, 6925, 7080 |
| SacI | GAGCTC | 1 cut(s) | 258 |
| SacII | CCGCGG | 2 cut(s) | 336, 1157 |
| ScaI | AGTACT | 3 cut(s) | 414, 2383, 6091 |
| SchI | GAGTC | 7 cut(s) | 1410, 3317, 3608, 5353, 5517, 5782, 6926 |
| SexAI | ACCWGGT | 2 cut(s) | 1057, 1303 |
| SfcI | CTRYAG | 6 cut(s) | 603, 906, 2193, 5753, 6030, 6912 |
| Sfr274I | CTCGAG | 2 cut(s) | 1249, 7506 |
| Sfr303I | CCGCGG | 2 cut(s) | 336, 1157 |
| SgrBI | CCGCGG | 2 cut(s) | 336, 1157 |
| SlaI | CTCGAG | 2 cut(s) | 1249, 7506 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 109, 1731, 2085, 2091, 3108, 4737, 6925, 7080 |
| SmlI | CTYRAG | 8 cut(s) | 1249, 1639, 5363, 5439, 5677, 5687, 6591, 7506 |
| SmoI | CTYRAG | 8 cut(s) | 1249, 1639, 5363, 5439, 5677, 5687, 6591, 7506 |
| SpeI | ACTAGT | 2 cut(s) | 1004, 1811 |
| SspI | AATATT | 6 cut(s) | 2850, 4042, 4378, 4404, 6300, 7267 |
| SstI | GAGCTC | 1 cut(s) | 258 |
| StyI | CCWWGG | 7 cut(s) | 1314, 2264, 4057, 4387, 6142, 6463, 6852 |
| TaiI | ACGT | 7 cut(s) | 12, 578, 670, 800, 3214, 3916, 4314 |
| TatI | WGTACW | 9 cut(s) | 412, 418, 994, 2381, 2404, 4706, 4773, 5245, 6089 |
| TauI | GCSGC | 4 cut(s) | 335, 338, 914, 3419 |
| TspGWI | ACGGA | 6 cut(s) | 177, 230, 603, 2123, 3541, 7556 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 4313, 6380 |
| Vha464I | CTTAAG | 1 cut(s) | 5687 |
| VneI | GTGCAC | 2 cut(s) | 6456, 7086 |
| VspI | ATTAAT | 1 cut(s) | 873 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1779, 6173, 6502 |
| XbaI | TCTAGA | 2 cut(s) | 139, 1501 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1555, 6140, 6381 |
| XhoI | CTCGAG | 2 cut(s) | 1249, 7506 |
| XmiI | GTMKAC | 4 cut(s) | 12, 2624, 2887, 5584 |
| ZrmI | AGTACT | 3 cut(s) | 414, 2383, 6091 |
| Zsp2I | ATGCAT | 4 cut(s) | 2997, 3961, 4968, 6946 |