Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0003397

Physical Location & Seq

Genomic Coordinates Forward (+)

38728016 .. 38734622

Gene Structure 6607 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0275200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGAACAACAACAGAGGGAGGTACCCGCCGGGGATCGGAGCCGGTCGCGGCGGCGGCATGAATGCGAACCCTCCGTTTCAGTCTCGGCCGCCGCACCAGCAGCAATATGTACAGAGGAATCTTTTGCCGAACCACCAGCAGCAGCAACAGTACTTTCAGCAACAGCAGCACCATCAACAGCAACAGCAGCAGCACCACCAGCAGCAACAACAGTGGCTCAGGAGAGGCCAGTTGGGTGGGAGCACCAGTGCCGATTCCGCCGTCGACGAGGTTGAGAAGACTGTGCAGTCCGAGGCCGTCGATCCAAGTTCGCAAGATTGGAAGGCAAGGTTAAAGATTCCTCCAGCTGATACGCGCTTCAGAACAGAGGATGTTACTGCAACTAAAGGAAATGAGTTTGAGGACTACTTTCTGAAACGTGAGCTACTGATGGGAATATATGAGAAGGGATTTGAAAGGCCATCTCCTATTCAGGAAGAAAGTATACCAATTGCTTTAACTGGTAGTGATATTCTTGCTAGAGCTAAAAATGGAACGGGGAAAACGGCTGCATTTTGCATCCCTGCTTTGGAAAAAATTGATCAAGATAACAATGTAATTCAAGTTGTTATACTGGTTCCAACTCGTGAGTTGGCCCTTCAAACATCACAAGTCTGTAAGGAGCTAGGGAAGCATTTGCAAATACAAGTTATGGTTACTACTGGAGGTACCAGCTTAAAGGATGATATCATGCGTTTATACCAACCGGTTCACTTACTCGTTGGAACTCCTGGAAGAATTTTAGATCTTTCAAAGAAAGGTGTTTGCATCTTGAAAGACTGTTCTATGCTTGTTATGGATGAGGCTGATAAACTTTTGTCTCCGGAGTTTCAACCTTCAGTGGAGCAGCTTATCCGCTTCTTGCCTTCAAATCGGCAAATTTTGATGTTTTCAGCTACATTTCCTGTCACTGTTAAGGACTTCAAAGAAAGATATCTGCACAAGCCTTATGTTATCAACCTTATGGATGAGCTTACTCTAAAGGGTATCACACAGTTCTATGCTTTTGTCGAGGAGAGACAGAAAGTCCACTGCCTAAACACACTTTTCTCCAAGCTTCAAATAAACCAGTCAATCATATTCTGCAATTCTGTGAATCGGGTGGAGTTATTGGCCAAGAAAATTACAGAACTGGGCTATTCATGCTTTTATATTCATGCAAAGATGCTACAAGACCATCGTAACAGAGTATTCCATGACTTCCGTAATGGTGCATGCAGAAATCTTGTTTGCACTGATCTATTTACAAGAGGAATAGATATTCAAGCTGTCAATGTTGTCATTAACTTTGATTTTCCAAAGAACTCAGAGACATATCTGCACAGGGTGGGTCGATCTGGAAGGTTTGGACACCTTGGTTTGGCTGTAAATTTGATCACCTATGAGGACCGCTTCAACTTGTATAGAATTGAGCAAGAACTTGGCACTGAGATCAAGCAAATTCCCCCACATATTGATCAGGCAATTTATTGCCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006873 GO:0006885 GO:0007035 GO:0008150 GO:0009987 GO:0016043 GO:0019725 GO:0022607 GO:0030003 GO:0030004 GO:0030641 GO:0032991 GO:0034622 GO:0042592 GO:0043291 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045851 GO:0048878 GO:0050801 GO:0051452 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0065003 GO:0065007 GO:0065008 GO:0070070 GO:0070071 GO:0070072 GO:0071840 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rav1p_C WD40

Protein Analysis

505

Amino Acids

57.82

Weight (kDa)

8.67

Isoelectric Point (pI)

45.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	155 - 320	1.6e-47	DEAD/DEAH box helicase
Helicase_C	PF00271	355 - 463	6.1e-32	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003397)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46560 AT2G46560 AT2G46560
fragaria_vesca	FvH4_7g16880 FvH4_7g16880 FvH4_7g16880 FvH4_7g16880
malus_domestica	MD01G1083800.v1.1
prunus_persica	Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0360111
rosa_laevigata	RLG00000018213 RLG00000027832
rosa_multiflora	Rmu_co8378581.1_g000001 Rmu_co8408019.1_g000001 Rmu_sc0007813.1_g000007 Rmu_ssc0000368.1_g000041
rosa_roxburghii	Rroxscaffold_4G00296380
rosa_rugosa	Rorug01G0275200 Rorug01G0275300
rosa_samantha	Rh1AG289000 Rh1BG254500 Rh1CG272000 Rh1DG283600
rosa_wichuraiana	Rw1G025630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	286
Acc65I	GGTACC	2 cut(s)	21, 707
AccB1I	GGYRCC	2 cut(s)	21, 707
AccI	GTMKAC	2 cut(s)	264, 484
AccII	CGCG	2 cut(s)	48, 355
AccIII	TCCGGA	1 cut(s)	862
AciI	CCGC	9 cut(s)	26, 48, 51, 54, 89, 92, 258, 895, 1429
AclWI	GGATC	2 cut(s)	41, 296
AcoI	YGGCCR	2 cut(s)	86, 1152
AcsI	RAATTY	4 cut(s)	777, 918, 1408, 1479
AcuI	CTGAAG	2 cut(s)	343, 861
AdeI	CACNNNGTG	1 cut(s)	1366
AfaI	GTAC	4 cut(s)	23, 111, 152, 709
AfiI	CCNNNNNNNGG	3 cut(s)	35, 568, 1399
AgeI	ACCGGT	1 cut(s)	745
AhdI	GACNNNNNGTC	1 cut(s)	1064
AjnI	CCWGG	1 cut(s)	769
Alw21I	GWGCWC	1 cut(s)	245
Alw26I	GTCTC	4 cut(s)	87, 864, 1051, 1343
AlwI	GGATC	2 cut(s)	41, 296
Aor13HI	TCCGGA	1 cut(s)	862
AoxI	GGCC	6 cut(s)	86, 226, 294, 458, 633, 1152
ApeKI	GCWGC	9 cut(s)	100, 139, 142, 166, 187, 190, 202, 548, 886
ApoI	RAATTY	4 cut(s)	777, 918, 1408, 1479
AsiGI	ACCGGT	1 cut(s)	745
Asp718I	GGTACC	2 cut(s)	21, 707
AspLEI	GCGC	1 cut(s)	357
AspS9I	GGNCC	2 cut(s)	634, 1426
AsuC2I	CCSGG	1 cut(s)	30
AsuHPI	GGTGA	1 cut(s)	1408
AvaII	GGWCC	1 cut(s)	1426
BalI	TGGCCA	1 cut(s)	1154
BanI	GGYRCC	2 cut(s)	21, 707
BarI	GAAGNNNNNNTAC	2 cut(s)	468, 500
BauI	CACGAG	1 cut(s)	624
BbsI	GAAGAC	1 cut(s)	284
Bbv12I	GWGCWC	1 cut(s)	245
BbvI	GCAGC	9 cut(s)	112, 151, 154, 178, 199, 202, 214, 535, 898
BccI	CCATC	4 cut(s)	180, 424, 469, 1224
BceAI	ACGGC	3 cut(s)	245, 281, 561
BciT130I	CCWGG	1 cut(s)	771
BclI	TGATCA	3 cut(s)	580, 1413, 1495
BcnI	CCSGG	1 cut(s)	30
BcoDI	GTCTC	4 cut(s)	87, 864, 1051, 1343
BfaI	CTAG	2 cut(s)	519, 665
BglII	AGATCT	1 cut(s)	784
BmcAI	AGTACT	1 cut(s)	152
Bme1390I	CCNGG	2 cut(s)	30, 771
Bme18I	GGWCC	1 cut(s)	1426
BmeRI	GACNNNNNGTC	1 cut(s)	1064
BmgT120I	GGNCC	2 cut(s)	634, 1426
BmiI	GGNNCC	4 cut(s)	23, 40, 618, 709
BmrFI	CCNGG	2 cut(s)	30, 771
BmrI	ACTGGG	1 cut(s)	1181
BmsI	GCATC	3 cut(s)	567, 816, 1194
BmuI	ACTGGG	1 cut(s)	1181
BpiI	GAAGAC	1 cut(s)	284
BpmI	CTGGAG	2 cut(s)	327, 723
Bpu10I	CCTNAGC	1 cut(s)	218
BpuMI	CCSGG	1 cut(s)	30
BsaJI	CCNNGG	3 cut(s)	29, 291, 1393
BsaWI	WCCGGW	2 cut(s)	745, 862
BsaXI	ACNNNNNCTCC	2 cut(s)	232, 262
Bsc4I	CCNNNNNNNGG	3 cut(s)	35, 568, 1399
Bse118I	RCCGGY	3 cut(s)	41, 745, 1512
Bse1I	ACTGG	7 cut(s)	229, 246, 505, 618, 706, 1108, 1176
BseAI	TCCGGA	1 cut(s)	862
BseBI	CCWGG	1 cut(s)	771
BseDI	CCNNGG	3 cut(s)	29, 291, 1393
BseGI	GGATG	5 cut(s)	376, 558, 727, 844, 1012
BseLI	CCNNNNNNNGG	3 cut(s)	35, 568, 1399
BseMII	CTCAG	3 cut(s)	232, 1359, 1458
BseNI	ACTGG	7 cut(s)	229, 246, 505, 618, 706, 1108, 1176
BseRI	GAGGAG	1 cut(s)	1067
BseX3I	CGGCCG	1 cut(s)	86
BseXI	GCAGC	9 cut(s)	112, 151, 154, 178, 199, 202, 214, 535, 898
BsgI	GTGCAG	3 cut(s)	305, 962, 1343
Bsh1236I	CGCG	2 cut(s)	48, 355
Bsh1285I	CGRYCG	2 cut(s)	46, 89
BshFI	GGCC	6 cut(s)	88, 228, 296, 460, 635, 1154
BshNI	GGYRCC	2 cut(s)	21, 707
BshTI	ACCGGT	1 cut(s)	745
BsiEI	CGRYCG	2 cut(s)	46, 89
BsiHKAI	GWGCWC	1 cut(s)	245
BsiSI	CCGG	5 cut(s)	29, 42, 746, 863, 1513
BslI	CCNNNNNNNGG	3 cut(s)	35, 568, 1399
BsmAI	GTCTC	4 cut(s)	87, 864, 1051, 1343
BsmI	GAATGC	1 cut(s)	67
BsnI	GGCC	6 cut(s)	88, 228, 296, 460, 635, 1154
Bsp1286I	GDGCHC	1 cut(s)	245
Bsp13I	TCCGGA	1 cut(s)	862
Bsp1407I	TGTACA	1 cut(s)	109
Bsp143I	GATC	9 cut(s)	33, 301, 580, 784, 1276, 1373, 1413, 1470, 1495
BspACI	CCGC	9 cut(s)	26, 48, 51, 54, 89, 92, 258, 895, 1429
BspANI	GGCC	6 cut(s)	88, 228, 296, 460, 635, 1154
BspCNI	CTCAG	3 cut(s)	231, 1358, 1459
BspEI	TCCGGA	1 cut(s)	862
BspFNI	CGCG	2 cut(s)	48, 355
BspLI	GGNNCC	4 cut(s)	23, 40, 618, 709
BspPI	GGATC	2 cut(s)	41, 296
BspT107I	GGYRCC	2 cut(s)	21, 707
BsrFI	RCCGGY	3 cut(s)	41, 745, 1512
BsrGI	TGTACA	1 cut(s)	109
BsrI	ACTGG	7 cut(s)	229, 246, 505, 618, 706, 1108, 1176
BssAI	RCCGGY	3 cut(s)	41, 745, 1512
BssECI	CCNNGG	3 cut(s)	29, 291, 1393
BssMI	GATC	9 cut(s)	33, 301, 580, 784, 1276, 1373, 1413, 1470, 1495
BssNAI	GTATAC	1 cut(s)	485
BssSI	CACGAG	1 cut(s)	624
BssT1I	CCWWGG	1 cut(s)	1393
Bst1107I	GTATAC	1 cut(s)	485
Bst2BI	CACGAG	1 cut(s)	624
Bst2UI	CCWGG	1 cut(s)	771
Bst4CI	ACNGT	6 cut(s)	150, 213, 283, 821, 952, 1035
BstAUI	TGTACA	1 cut(s)	109
BstC8I	GCNNGC	1 cut(s)	1255
BstDEI	CTNAG	3 cut(s)	218, 1345, 1467
BstF5I	GGATG	5 cut(s)	376, 558, 727, 844, 1012
BstFNI	CGCG	2 cut(s)	48, 355
BstHHI	GCGC	1 cut(s)	357
BstKTI	GATC	9 cut(s)	36, 304, 583, 787, 1279, 1376, 1416, 1473, 1498
BstMAI	GTCTC	4 cut(s)	87, 864, 1051, 1343
BstMBI	GATC	9 cut(s)	33, 301, 580, 784, 1276, 1373, 1413, 1470, 1495
BstMCI	CGRYCG	2 cut(s)	46, 89
BstMWI	GCNNNNNNNGC	9 cut(s)	54, 97, 100, 166, 187, 199, 257, 670, 1182
BstNI	CCWGG	1 cut(s)	771
BstNSI	RCATGY	1 cut(s)	1257
BstSCI	CCNGG	2 cut(s)	28, 769
BstUI	CGCG	2 cut(s)	48, 355
BstV1I	GCAGC	9 cut(s)	112, 151, 154, 178, 199, 202, 214, 535, 898
BstV2I	GAAGAC	1 cut(s)	284
BstX2I	RGATCY	1 cut(s)	784
BstXI	CCANNNNNNTGG	1 cut(s)	236
BstYI	RGATCY	1 cut(s)	784
BstZ17I	GTATAC	1 cut(s)	485
BstZI	CGGCCG	1 cut(s)	86
BsuRI	GGCC	6 cut(s)	88, 228, 296, 460, 635, 1154
BtsCI	GGATG	5 cut(s)	376, 558, 727, 844, 1012
BtsI	GCAGTG	1 cut(s)	1069
BtsIMutI	CAGTG	7 cut(s)	218, 253, 885, 948, 1069, 1272, 1464
Cac8I	GCNNGC	1 cut(s)	1255
CfoI	GCGC	1 cut(s)	357
Cfr10I	RCCGGY	3 cut(s)	41, 745, 1512
Cfr13I	GGNCC	2 cut(s)	634, 1426
Csp6I	GTAC	4 cut(s)	22, 110, 151, 708
CspAI	ACCGGT	1 cut(s)	745
CspCI	CAANNNNNGTGG	2 cut(s)	194, 229
CviAII	CATG	6 cut(s)	58, 730, 1182, 1196, 1235, 1254
CviQI	GTAC	4 cut(s)	22, 110, 151, 708
DdeI	CTNAG	3 cut(s)	218, 1345, 1467
DpnI	GATC	9 cut(s)	35, 303, 582, 786, 1278, 1375, 1415, 1472, 1497
DpnII	GATC	9 cut(s)	33, 301, 580, 784, 1276, 1373, 1413, 1470, 1495
DraIII	CACNNNGTG	1 cut(s)	1366
DrdI	GACNNNNNNGTC	1 cut(s)	286
DriI	GACNNNNNGTC	1 cut(s)	1064
DseDI	GACNNNNNNGTC	1 cut(s)	286
EaeI	YGGCCR	2 cut(s)	86, 1152
EagI	CGGCCG	1 cut(s)	86
Eam1105I	GACNNNNNGTC	1 cut(s)	1064
EciI	GGCGGA	1 cut(s)	247
EclXI	CGGCCG	1 cut(s)	86
Eco130I	CCWWGG	1 cut(s)	1393
Eco32I	GATATC	2 cut(s)	727, 974
Eco47I	GGWCC	1 cut(s)	1426
Eco52I	CGGCCG	1 cut(s)	86
Eco57I	CTGAAG	2 cut(s)	343, 861
EcoRII	CCWGG	1 cut(s)	769
EcoRV	GATATC	2 cut(s)	727, 974
EcoT14I	CCWWGG	1 cut(s)	1393
ErhI	CCWWGG	1 cut(s)	1393
FaeI	CATG	6 cut(s)	61, 733, 1185, 1199, 1238, 1257
FatI	CATG	6 cut(s)	57, 729, 1181, 1195, 1234, 1253
FauI	CCCGC	1 cut(s)	33
FbaI	TGATCA	3 cut(s)	580, 1413, 1495
FblI	GTMKAC	2 cut(s)	264, 484
FokI	GGATG	5 cut(s)	383, 545, 734, 851, 1019
FspBI	CTAG	2 cut(s)	519, 665
GlaI	GCGC	1 cut(s)	356
GsuI	CTGGAG	2 cut(s)	327, 723
HaeIII	GGCC	6 cut(s)	88, 228, 296, 460, 635, 1154
HapII	CCGG	5 cut(s)	29, 42, 746, 863, 1513
HhaI	GCGC	1 cut(s)	357
Hin1II	CATG	6 cut(s)	61, 733, 1185, 1199, 1238, 1257
Hin6I	GCGC	1 cut(s)	355
HinP1I	GCGC	1 cut(s)	355
HincII	GTYRAC	1 cut(s)	265
HindII	GTYRAC	1 cut(s)	265
HindIII	AAGCTT	1 cut(s)	1094
HinfI	GANTC	4 cut(s)	118, 254, 337, 1135
HpaII	CCGG	5 cut(s)	29, 42, 746, 863, 1513
HphI	GGTGA	1 cut(s)	1408
Hpy166II	GTNNAC	4 cut(s)	265, 485, 751, 1069
Hpy188I	TCNGA	5 cut(s)	38, 292, 362, 414, 1348
Hpy188III	TCNNGA	7 cut(s)	220, 473, 584, 626, 811, 863, 1377
Hpy8I	GTNNAC	4 cut(s)	265, 485, 751, 1069
Hpy99I	CGWCG	3 cut(s)	266, 269, 302
HpyAV	CCTTC	6 cut(s)	316, 439, 647, 885, 915, 1374
HpyCH4III	ACNGT	6 cut(s)	150, 213, 283, 821, 952, 1035
HpyCH4IV	ACGT	1 cut(s)	418
HpyF10VI	GCNNNNNNNGC	9 cut(s)	54, 97, 100, 166, 187, 199, 257, 670, 1182
HpyF3I	CTNAG	3 cut(s)	218, 1345, 1467
HpySE526I	ACGT	1 cut(s)	418
Hsp92II	CATG	6 cut(s)	61, 733, 1185, 1199, 1238, 1257
HspAI	GCGC	1 cut(s)	355
Kpn2I	TCCGGA	1 cut(s)	862
KpnI	GGTACC	2 cut(s)	25, 711
Ksp22I	TGATCA	3 cut(s)	580, 1413, 1495
Kzo9I	GATC	9 cut(s)	33, 301, 580, 784, 1276, 1373, 1413, 1470, 1495
LmnI	GCTCC	4 cut(s)	38, 240, 661, 883
Lsp1109I	GCAGC	9 cut(s)	112, 151, 154, 178, 199, 202, 214, 535, 898
LweI	GCATC	3 cut(s)	567, 816, 1194
MaeI	CTAG	2 cut(s)	519, 665
MaeII	ACGT	1 cut(s)	418
MaeIII	GTNAC	4 cut(s)	373, 694, 946, 1220
MalI	GATC	9 cut(s)	35, 303, 582, 786, 1278, 1375, 1415, 1472, 1497
MboI	GATC	9 cut(s)	33, 301, 580, 784, 1276, 1373, 1413, 1470, 1495
MboII	GAAGA	3 cut(s)	289, 488, 786
MfeI	CAATTG	1 cut(s)	489
MflI	RGATCY	1 cut(s)	784
MhlI	GDGCHC	1 cut(s)	245
MlsI	TGGCCA	1 cut(s)	1154
MluNI	TGGCCA	1 cut(s)	1154
MmeI	TCCRAC	2 cut(s)	644, 742
Mox20I	TGGCCA	1 cut(s)	1154
MroI	TCCGGA	1 cut(s)	862
MscI	TGGCCA	1 cut(s)	1154
MseI	TTAA	5 cut(s)	332, 497, 716, 954, 1323
Msp20I	TGGCCA	1 cut(s)	1154
MspA1I	CMGCKG	1 cut(s)	347
MspI	CCGG	5 cut(s)	29, 42, 746, 863, 1513
MspR9I	CCNGG	2 cut(s)	30, 771
MunI	CAATTG	1 cut(s)	489
Mva1269I	GAATGC	1 cut(s)	67
MvaI	CCWGG	1 cut(s)	771
MvnI	CGCG	2 cut(s)	48, 355
MwoI	GCNNNNNNNGC	9 cut(s)	54, 97, 100, 166, 187, 199, 257, 670, 1182
NciI	CCSGG	1 cut(s)	30
NdeII	GATC	9 cut(s)	33, 301, 580, 784, 1276, 1373, 1413, 1470, 1495
NlaIII	CATG	6 cut(s)	61, 733, 1185, 1199, 1238, 1257
NlaIV	GGNNCC	4 cut(s)	23, 40, 618, 709
NmeAIII	GCCGAG	1 cut(s)	64
NmuCI	GTSAC	1 cut(s)	946
NspI	RCATGY	1 cut(s)	1257
PaeI	GCATGC	1 cut(s)	1257
PctI	GAATGC	1 cut(s)	67
PfeI	GAWTC	4 cut(s)	118, 254, 337, 1135
PfoI	TCCNGGA	1 cut(s)	769
PinAI	ACCGGT	1 cut(s)	745
Psp6I	CCWGG	1 cut(s)	769
PspGI	CCWGG	1 cut(s)	769
PspN4I	GGNNCC	4 cut(s)	23, 40, 618, 709
PspPI	GGNCC	2 cut(s)	634, 1426
PsuI	RGATCY	1 cut(s)	784
PvuII	CAGCTG	1 cut(s)	347
RsaI	GTAC	4 cut(s)	23, 111, 152, 709
RsaNI	GTAC	4 cut(s)	22, 110, 151, 708
SalI	GTCGAC	1 cut(s)	263
SaqAI	TTAA	5 cut(s)	332, 497, 716, 954, 1323
Sau3AI	GATC	9 cut(s)	33, 301, 580, 784, 1276, 1373, 1413, 1470, 1495
Sau96I	GGNCC	2 cut(s)	634, 1426
ScaI	AGTACT	1 cut(s)	152
ScrFI	CCNGG	2 cut(s)	30, 771
SduI	GDGCHC	1 cut(s)	245
SfaNI	GCATC	3 cut(s)	567, 816, 1194
SgrDI	CGTCGACG	1 cut(s)	263
SinI	GGWCC	1 cut(s)	1426
SphI	GCATGC	1 cut(s)	1257
SsiI	CCGC	9 cut(s)	26, 48, 51, 54, 89, 92, 258, 895, 1429
SspMI	CTAG	2 cut(s)	519, 665
StyD4I	CCNGG	2 cut(s)	28, 769
StyI	CCWWGG	1 cut(s)	1393
TaaI	ACNGT	6 cut(s)	150, 213, 283, 821, 952, 1035
TaiI	ACGT	1 cut(s)	421
TaqI	TCGA	4 cut(s)	264, 300, 1050, 1372
TatI	WGTACW	2 cut(s)	109, 150
TauI	GCSGC	5 cut(s)	51, 54, 57, 91, 94
TfiI	GAWTC	4 cut(s)	118, 254, 337, 1135
Tru1I	TTAA	5 cut(s)	332, 497, 716, 954, 1323
Tru9I	TTAA	5 cut(s)	332, 497, 716, 954, 1323
TscAI	CASTG	7 cut(s)	218, 253, 885, 955, 1076, 1279, 1471
TseFI	GTSAC	1 cut(s)	946
TseI	GCWGC	9 cut(s)	100, 139, 142, 166, 187, 190, 202, 548, 886
Tsp45I	GTSAC	1 cut(s)	946
TspDTI	ATGAA	4 cut(s)	17, 74, 1170, 1184
TspGWI	ACGGA	2 cut(s)	63, 1232
TspRI	CASTG	7 cut(s)	218, 253, 885, 955, 1076, 1279, 1471
VpaK11BI	GGWCC	1 cut(s)	1426
XapI	RAATTY	4 cut(s)	777, 918, 1408, 1479
XceI	RCATGY	1 cut(s)	1257
XmiI	GTMKAC	2 cut(s)	264, 484
XspI	CTAG	2 cut(s)	519, 665
ZrmI	AGTACT	1 cut(s)	152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.