AT2G46560

Transducin family protein WD-40 repeat family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0003397
Physical Location & Seq
Reverse (-)
19115322 .. 19125856
10535 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G46560.3

Sequence Viewer

Length: 7542 bp
ATGAGATATAGGATCCAGCTCAAACCTTCTGGCTTGGAACGAGGGTCCGGTGATCCTCGTACTGATCGGATCGATCATTTGCCTCTCCGGCAACTCAGATCGGAGATCGTTCCTCCAGCTCCGACTCGATCCCAATCTTCTATTGATTGGCTTCCCGACTTCGCTAATTACTCATGGCTTGCTTACGGAGCATCCACTCTCGTCGTCATCTCTCATCTACCTTCTCCTCTCCGCGGCGAAGATTCCACGAACGGACCATTTTTCCGTCAGATTCTAGAGGTTTCCGGCGAACCAGTTACTGCAGTTTGCTGGTCTCCTGTAACGCCGTCTGTAGGCGAGCTCGCTGTTGGCTCTGGGAACTATATCTTCCTCTTCGCGCGTGATTTGAAAGGTTCTTTTTGTTGGAGTCAGAATGCCATACTGGTGCAGGAAACAATAGTTGAAGCGATTGAGTGGACAGGATCCGGGGATGGGATAATAGTTGGTGGAACTGATATTGTTCTGTGGAAGAGAAGGAACCAATCTTGGGAAATAGCTTGGAAGTTCTCTGGGGATCACCTTCAGGATCTGGTTTCCTCCACCTGGTCATTCGAGGGTCCTTTTGCCACAGCAACTTCTTGGAGGAAGTTTCCAGCTGAGTGTGACGACGCAGGAAAAAGTGTCTTGGCCTATTATAGTGATGGTGAATCATATCATAACTTTGAATTGCCTCATCCTCAGAGAATATCCATGATTCAGTGGAGACCGATGGCTGCAGAACAGTCTGCAATAGGTATAGGTAAATCAATGAGGAATGTGCTAATGACATGTTGCTTGGATGGGGCAGTAAGGTTATGGTGTGAGGTAGATGGTGGAAAGACAAAAAAAGGCATGAAAGATGTGCCTGATCATAAAAAATCGTTTTGCGTGGCAGCTGTGATAGAGATAAATCAGGTCTTGGATGGCTGTTTGGGTAGAGATTTATTTCTTTTTTGGGGAACTCGTACAGGGGGTATATTCAAAACCATCGAAGGTACTAATCAAGTTTTTTCTATGGAAAAGTACGATAATGAGAATGTTGGAAAATGTGAGTGGTTGGTAGGGTATGGCCCTGGAAATTTTGCTACTTTGTGGGCTGTCCATTGTCTTGATGACATCTCTCCTATGAGGTTTCCACGAGTAACATTGTGGGCGAAACAAGAATCAAATGAAATTGGTGCAGGATCACTCTCTCTAGCGAGTGCTACAGGTTCTTCTGATCGATTACCCCTTAAGAAAGTTTCTGTATTGAGAAATAACCTTTATGGCACACCACTTATCTGCTCGTCGATTTATTTATCTCCGCAGAATACTGTATATTGGTCTTCCTTGCACACAATAAAGTCACATGACTCGGAAGATTCATCCCCAAATAAATCCAGTTTATTGAAGTGCATTGATGGAAAAGTATTATATCTTGATGGTCATGGTGGGAAAATCCTACAGGTTGCCTCTGATCCTTTTGTATGTGAGGCGGGATACACTGCTTCCCTGGATTCTAATGGTCTGATAATAATCTGCTCCTCTAGTGTTTATTTGAACCGGACTATTGAGCATCCTATATCTGTTGCCTCTTGGAAGCCTTGTGGACGGCTACAAAATCAAGAGTTCAGATTAAAGTACACAAGTTTATGTTGGGCACCTTCTTCATTGAAAGATGAGAGATTTCTACTTGTGGGACATGTAGGAGGCGTCGATTGCTTTAGTGTAAGGAATTGTGGGAAAGGTGATGACGGTTATCTAACCCATTATATATGTACCATACCGTTTACGGTTAATAGCCCTTTGCAGAGTGGTCCGACCAGCATATTTGCAAAACCTCTGTCTAATTCTTGTGGAAAGACATTTAAAAGTAACAGATTTTTGCTCCTGAGTGTATGGATGAAAGAGAAACGGTTTGATGCTCTGTCATGGAGTGTAACCTTACATCATTTTGATACAGCAGGAAGTACCTGCGATTGTCATTTTCATGATTTTGATAGTATTGGATTGGGAAAGTGGTTGTTCGAAGATACTTTTGCTGGCAAGACGAATTGCCTTGCTATTAGATCATGCTCTTCAGAAATACCTGAATCTCACCGTGAGGATGAAGTTACGAGTTTTGCTGTGGTCAATCCAAGTGGGAGGGATCTAGAGAATGGTGTGAACAGTGAAAGTCAAGCTTATACTATTGCAACTGGTCAAGCTGATGGCTCTTTAAAACTTTGGAGAAGTAGTTTTCAGGAAAGTTCAACACCTTCCGGTCTGTGGGAGCTAGTTGGCATGCTTACGGTTGGCCAAAATCCTGTCAGTGCTATATCTCTGACTGATTCGGGACACAAGATAGCAGCCCTCTGTACAGAGAGTCATTCAAAAGCTGCCCGCGCAGTTAGTATATGGGAGATTGTACACCTTATAGATTCAGGGGTTTTCATACTAGAGGATAAGGTACATGTTGATGCAGAAGTTGTTGCTGTAAGATGGTCAACTACGGGTAATGATCAGCTATTACTTGGAGTTTGCACACAGATTGAGATGCGGGTGTATGGTATTGCTCGGCAGCCTTGCAAAAGTACCAGTTTCGCGGCCTATGATTATTCTTCAGAGGCACAGATTTGGCAATGCTTCGCTGTTACTCGTACATTTTCGGCTATACATGATTTATGGTGGGGACCCAAAGCCATGACTTGTCTTGTTCACAATGATTATATTAGTCTACATGGTCAATGGCTGGCTGTTGTTGATAAGAAGCAAAAGATTGATAACTATCCAGAAATATTTGCATCCAATCTTCCCAACTTAGTAAATGCTACAGAAGAAGGCAGAGACTCTGAATTCTTATCTGATTCTGGTACTAATGATATCAACGAAGCTGATACCACATCTACTAGCAGAGGTTGTATTCCTCTACCTTCAACTAGTAATGCAATTGATGACGGGCAAGTCAATAGTATGTCACTGATTGGGACCGCATATGGCTCAAATACTATTGATGACATTATGAGCATGGGACATATGGTGGAGAAGTTAGGAGGTGCTTTACCACTTTATCATCCTCATGCCCTCCTTGTAGCTATACGTTCAGGCAATTGGAAACGAGCAAGTGCAGCTCTTAGACATCTTGCTGAATATATTACTTCAAGTGATACCTCCGAGAAGGGATATGCTGTAAAGTCAGTTCTTTGTCCAGATATCCTTTTGTCAAAATATTATGAAGGATCTCTCTCCAATGGCCCAAATCCTAAGGATTTCCAATGGGGTGGGACGTCTGGTTCAATGCTACAGTATTCGCAGTTTCAGTCAGGGTTGCAGTCAAAATTTAATATGGAATCGTATAGTCCCAATTCACCTGCAACAGACTTGGAATTTAGTGGCTTCTGCGAGCAGCTCAAGAAGTTATCAGATGAAGGAAATATTTCCAGGATAGAAATATTGCAATATTTTGCAATTGTTGACCTTCTTTGTGAAATTAGTAACCCACATTCTACGTCTGTCTATGCAAGTCTTGATGAACCTGGGAGAAGATTTTGGGTCACACTTAGGTTTAAACAGCTATTCTTAGCTCGAAGTTCTGGTAAAACAGCATCTCTGGAAGAGCTTGATATTGACTCTAGTATGATAGGATGGGCTTTTCACTCAGAGTCTCAAGAAAATTTGTCTGGTTCTCTTTTGCCCAATGAATCATCATGGCAACAAATGCGATCACAGGGTTTTGGATTTTGGTATTCAAATGCAGCACAATTGCGATCACGGATGGAGAAACTGGCCCGACAGCAATACCTGAAGAACAAGAATCCTAAAGATTGTGCGCTTCTCTATATAGCTTTAAATAGAGTTCAAGTTTTGGCTGGTCTTTTCAAATTAAGCAAGGATGAGAAAGATAAACCCTTGGTGGTTTTTCTTTCACGCAATTTTCAGGAAGAGAAAAATAAGGCAGCAGCCTTGAAAAATGCATATGTACTAATGGGTAAACACCAACTGGAACTGGCTATAGGTTTCTTTCTCCTTGGAGGTGAAGCTTCATCTGCAATAAATGTTTGTGTGAAAAATCTTCAGGATGAGCAGCTTGCGCTCGTAATTTGCCGGCTTATTGATGGGCAGGGTGGGGCCCTGGAAAGTAATCTTATAAAGAAATATATACTCCCATCTGCTGTTCAGAGAGGAGACTTTTGGCTAGCAAGCCTTCTTAAGTGGGAATTAGGAGAGTACCACCGGTCAATTCTTGCTATGGCTGGGTGTCTAGAGAACCCTGCTACTGAGAGCTCTACTGTTTCTTCAAATCACGTCTCTTTTGTGGATCCTAGTATTGGCCTATACTGCCTCATGTTGGCAACCAAAAATAGTGTGAAGAACGCATTGGGGGAAAGAACTGCCTCAACTCTTAGTAGATGGGCATCCTTAATGGCTGCTACCGCCTTCAGCAGATGTGGGCTCCCGCTCGAGGCGTTAGAATGTCTTTCACCATCTGCCAGCGGTCATGGTGGGACCCATCAGACTAGCGTTCCAAGTAACGGTCAGTTGCATACTACACAAGGTGTTTTTGATCACTCTGTTCCTCATTCGTCGAATTGGGTATCAAGCGGTGTTTCATCTACTGTGGACACTCATTTTAGATTGGGTTTAGCCGTCCAGTTCCTCTCGATGATCTTACGGGAAGCAACTGCACCCTTAATGAATTCTGAAGTTGTTTCATGTGAGAAATTCTCACGATTTCAACATAAGCTACAAACAGCTTTGGAGCAATTTCACCAGAGATTTTCGCTGTCTGCATCTTACCTACGTAATATGATGATTCTGTCAGCATACAACCGAGGGTTACTATCCATGGGACACAATATATTTCAGGAAAATAGTTCCTCAGGACTCTCAGACGACAAGTCTCACACAGATGAAGATCTCCTCCAGTATTCAGCGTTGTCTAAATTGATTCTAAAAGCGACTGATGAGAAATCATTGGTGTTATCACGTATCATTGCTGCGTGCAGTGTCACTTGCTTACACTCAGTGCCATGCTTTGAGGAAAACAAGGTGTCATCTGGACCTGATCCAAAGTGGTCCAATGCTTTGCGGTTTTACTTTCAAGGAATTCTGGAATCGTTCTCTAATTTAAGAACTTCTATAAGGCTGTGCTTGGGCTCCTCTGTGGAAGACCTGAAAACAAAACTTGCAGTTGTTCTTGATTTAGTCGAATATTGTTTGAGACTCGCAATGGCTTGGGTTCTGGGAGACGTGCATTGTCTCTTTCGAATGGTTCAGCCCCTTGTGATATCATATTTTAATGGGCATATGCCTTATGAGGTTGACCTGGAAAGTGTGAAGAGAGTATACCACCAGGAAGCTTCTGTTAGTGTACCAGATGCATCAGATGTAGGAGTTAATTCTAAGTTCAGCAGTGTTGTTGAGAATCACGGAGTTGGCTATCCAGTATACTCAATTCCAGAAGATGAAAGATGTCTGGTAACACAAGCTTGTTTCTGGAAGCATGTTTCAGACTTTGTGAAACTTAAGCTGGTATCTATTTCGATCAATCTAGATGATGGTATTTCGAATAGTGGTTCCGCTGAAAATTTTGATGCCCAGACATCATTGGACTCCAGTGATGACATTGTATGCGTAACGGAGAAGATAATGTCTGTTCTGGGAAAAACACTGATTAGCACCCTAGCTCAACTCTCTTCGTACCATGTAAAACAACTAGTATTAGTCTTGAAACAGAAACTAGAGAAGAGACTTCAGGTTCCTACCTTGTTATGGCTGCTCGAATGTCAGGGATCTCAAGCAAATTTTCTTAATCGGGATATCCCAGATGCAGGTGTAGAGACGGAAAAAAACGGTGACCCTGTGGTTTCTGTGAGGTTCTGGAAGCTTTGTGTTGATCCTCATTTACTACACGAAGCTTTCTTGTTAGAAAATTTTGACATATTTGAATGGTCAAAATCTAAACCATTGGAAGATTGGAGCGATATGTACAGAGAAGTAATCAGGAAGAATGAGCTCTATGTGCCATGCAATCAAGATGGTCGAAGTAGTAATGAGGTGGCTTCACTTGCAAACCACGCTTCAAATTCTTCACCAAAAGCTGCGGTAACTGCCAATGAAAACTCTGCGTTCCAGAACCCCAAAGAAATCCATAAGAGGACCGGGGAGCTTATAGAGGCCCTTTGTATCAACGCCATTAACCATCGGCAAGCTGCATTAGCTAGCAACCGCAAGGGTATAATTTTCTTTAACCTAGAAGATGGTGATTCTTCCCAAAATCAGTCAGACTATATCTGGTCAGATGCTGACTGGCCACATAATGGTTGGGCTAACTCTGAGTCAACTCCCGTTCCAACATGTGTTTCACTCGGTGTTGGTCTTGGGGATAAGAAAGGAGCACACCTTGGGTTAGGTGGGGCCACTGTTGGAGTTGTTTCTCTTTCCAAGCCTGGGAAAGCTGACAGAGTTCCTGGCTACTCTGGGTTAGGAGCGATAGCGGATCCAGGATCATTTTTTACCCAGATCCGCCGGTGGTTAGGAGTCTCTGGTCTAGGTTGGGAAACTCAAGAAGAATTTGAAGAGTTTGTTGATCCTCCCCCAACAGTTGAAAGTGTTATTACGAGAGCATTCTCTAATCACCCGACAATGCCCCTCTTCTTGGTTGGCTCAAGCAACACTCACATATACTTGTGGGAGTTTGGAAACGAAAGAGCTACTGCAACTTATGGTGTTCTTCCTGCTGCAAATGTTTCCCCTCCTTATGCTTTGGCGTCGATATCAGCAGTGCAATTCGGTCCATTCGGACACAGATTTGCTAGCGCTGCACTGGATGGAACTGTATGCACTTGGCAATCAGAAGTTGGAGGAAGGAGCAATATTCATCCTGTTGAATCATCTCTTTGCTTCAATGGCCATGCATCAGATGTAGGATATATTAGTTCGAGTGGATCCATTGTTGCAGCTTCAGGATATAGCTCAAGTGGTGCAAATGTCGTTGTGTGGGATACTCTAGCTCCCCCTTCAACCTCCCAGGCATCTATCAATTGCCATGAAGGTGGTGCACGCTCTATCTCGGTATTTGATAATGACATTGGTAGTGGTTCAATTTCTCCTATGATTGTGACTGGTGGCAAAAATGGTGATGTCGGTTTGCACGATTTCCGGTTTATTGCAACCGGAAAGATGAAGAAGCAAAGGAACCCTGACGGTGGATCTTCGACTGATGGAGATCAAAACAAGAATGGGATGCTTTGGTATATACCAAAGGCTCACTTAGGGAGTGTGACAAAAATAGCGACAATCCCACGCACAAGTCTTTTCTTGACGGGAAGCAAAGACGGAGAAGTAAAACTTTGGGATGCGAAAGCTGCAAAGTTGATTCATCATTGGCCTAAACTACACGAAAGACACACTTTTCTGCAGCCAAACTCGAGAGGCTACGGTGGAATCATCCGGGCTGGGGTGACTGACATACAAGTTTGTCCGAATGGATTTATAACGTGTGGTGGTGATGGCACGGTGAAGTTCGTCAGCCTCGTAGATTCTTCCTATGGCGATGCTAAATAA

Protein Analysis

2513

Amino Acids

275.51

Weight (kDa)

5.94

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rav1p_C PF12234 527 - 1239 9.2e-73 RAVE protein 1 C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 4124, 7472
AarI CACCTGC 2 cut(s) 3355, 5798
AasI GACNNNNNNGTC 1 cut(s) 2939
AatII GACGTC 1 cut(s) 3266
Acc36I ACCTGC 3 cut(s) 1979, 3355, 5798
AccB1I GGYRCC 1 cut(s) 1657
AccB7I CCANNNNNTGG 1 cut(s) 6296
AccBSI CCGCTC 1 cut(s) 4435
AccI GTMKAC 3 cut(s) 2713, 5322, 5424
AccII CGCG 5 cut(s) 234, 377, 379, 2382, 2582
AcoI YGGCCR 3 cut(s) 2293, 6287, 6886
AcuI CTGAAG 9 cut(s) 545, 2061, 2583, 3800, 4034, 4399, 4698, 5714, 6924
AcyI GRCGYC 3 cut(s) 1710, 3263, 6746
AdeI CACNNNGTG 3 cut(s) 4532, 5002, 6347
AfeI AGCGCT 1 cut(s) 6796
AflII CTTAAG 3 cut(s) 1250, 4184, 5501
AflIII ACRYGT 5 cut(s) 806, 1699, 2449, 6332, 7475
AgeI ACCGGT 1 cut(s) 4209
AhdI GACNNNNNGTC 1 cut(s) 4873
AhlI ACTAGT 2 cut(s) 2915, 5692
AjiI CACGTC 2 cut(s) 4282, 5227
AjuI GAANNNNNNNTTGG 4 cut(s) 4337, 4369, 6322, 6354
AloI GAACNNNNNNTCC 2 cut(s) 3253, 3285
Alw21I GWGCWC 5 cut(s) 342, 4262, 5994, 6376, 7039
Alw44I GTGCAC 1 cut(s) 7035
AlwNI CAGNNNCTG 3 cut(s) 299, 568, 6281
Ama87I CYCGRG 2 cut(s) 4436, 7405
Aor51HI AGCGCT 1 cut(s) 6796
ApaI GGGCCC 1 cut(s) 4108
ApaLI GTGCAC 1 cut(s) 7035
ArsI GACNNNNNNTTYG 2 cut(s) 1826, 1858
AsiGI ACCGGT 1 cut(s) 4209
Asp700I GAANNNNTTC 1 cut(s) 3412
AspLEI GCGC 5 cut(s) 379, 2384, 3808, 4069, 6797
AsuC2I CCSGG 3 cut(s) 466, 6139, 7430
AsuII TTCGAA 3 cut(s) 2025, 5242, 5543
AsuNHI GCTAGC 3 cut(s) 4171, 6197, 6791
AvaI CYCGRG 2 cut(s) 4436, 7405
AxyI CCTNAGG 2 cut(s) 3240, 4855
BaeGI GKGCMC 3 cut(s) 1660, 4108, 7039
BalI TGGCCA 3 cut(s) 2295, 6289, 6888
BamHI GGATCC 5 cut(s) 12, 461, 4294, 6475, 6923
BanI GGYRCC 1 cut(s) 1657
BanII GRGCYC 6 cut(s) 342, 4108, 4262, 4431, 5135, 5994
BarI GAAGNNNNNNTAC 2 cut(s) 5306, 5338
BauI CACGAG 1 cut(s) 1155
BbsI GAAGAC 2 cut(s) 1335, 5151
Bbv12I GWGCWC 5 cut(s) 342, 4262, 5994, 6376, 7039
BceAI ACGGC 3 cut(s) 310, 1625, 4607
BciVI GTATCC 2 cut(s) 1490, 6973
BclI TGATCA 3 cut(s) 886, 2497, 4540
BcnI CCSGG 3 cut(s) 466, 6139, 7430
BcuI ACTAGT 2 cut(s) 2915, 5692
BfmI CTRYAG 9 cut(s) 300, 330, 753, 1224, 1460, 2808, 3278, 3987, 7394
BfoI RGCGCY 1 cut(s) 6798
BfrI CTTAAG 3 cut(s) 1250, 4184, 5501
BfuAI ACCTGC 3 cut(s) 1979, 3355, 5798
BfuI GTATCC 2 cut(s) 1490, 6973
BglI GCCNNNNNGGC 1 cut(s) 88
BglII AGATCT 1 cut(s) 4891
BmeRI GACNNNNNGTC 1 cut(s) 4873
BmeT110I CYCGRG 2 cut(s) 4436, 7405
BmgBI CACGTC 2 cut(s) 4282, 5227
BmtI GCTAGC 3 cut(s) 4175, 6201, 6795
BpiI GAAGAC 2 cut(s) 1335, 5151
BplI GAGNNNNNCTC 2 cut(s) 4685, 4717
BpmI CTGGAG 3 cut(s) 99, 4883, 5575
Bpu14I TTCGAA 3 cut(s) 2025, 5242, 5543
BpuEI CTTGAG 6 cut(s) 3371, 3627, 5757, 6525, 6628, 6937
BpuMI CCSGG 3 cut(s) 466, 6139, 7430
Bsa29I ATCGAT 2 cut(s) 72, 1240
BsaAI YACGTR 2 cut(s) 4778, 4964
BsaBI GATNNNNATC 6 cut(s) 133, 1532, 2763, 4390, 4890, 7203
BsaHI GRCGYC 3 cut(s) 1710, 3263, 6746
BsaI GGTCTC 2 cut(s) 318, 736
BsaWI WCCGGW 6 cut(s) 47, 1560, 2258, 4209, 7137, 7151
BsaXI ACNNNNNCTCC 4 cut(s) 2218, 2248, 6973, 7003
Bse118I RCCGGY 3 cut(s) 4080, 4209, 6504
Bse21I CCTNAGG 2 cut(s) 3240, 4855
Bse3DI GCAATG 3 cut(s) 2624, 4968, 5211
Bse8I GATNNNNATC 6 cut(s) 133, 1532, 2763, 4390, 4890, 7203
BseCI ATCGAT 2 cut(s) 72, 1240
BseJI GATNNNNATC 6 cut(s) 133, 1532, 2763, 4390, 4890, 7203
BseMI GCAATG 3 cut(s) 2624, 4968, 5211
BseRI GAGGAG 5 cut(s) 216, 1531, 4173, 4886, 5125
BseSI GKGCMC 3 cut(s) 1660, 4108, 7039
BseYI CCCAGC 2 cut(s) 4229, 7433
BsgI GTGCAG 6 cut(s) 446, 1218, 3123, 4644, 4999, 6783
Bsh1236I CGCG 5 cut(s) 234, 377, 379, 2382, 2582
BshNI GGYRCC 1 cut(s) 1657
BshTI ACCGGT 1 cut(s) 4209
BshVI ATCGAT 2 cut(s) 72, 1240
BsiHKAI GWGCWC 5 cut(s) 342, 4262, 5994, 6376, 7039
BsiHKCI CYCGRG 2 cut(s) 4436, 7405
BslFI GGGAC 9 cut(s) 1710, 2346, 2682, 2977, 3021, 3274, 3321, 4495, 4839
BsmBI CGTCTC 3 cut(s) 4288, 5217, 5810
BsmFI GGGAC 9 cut(s) 1710, 2346, 2682, 2977, 3021, 3274, 3321, 4495, 4839
BsmI GAATGC 2 cut(s) 418, 6602
Bso31I GGTCTC 2 cut(s) 318, 736
BsoBI CYCGRG 2 cut(s) 4436, 7405
Bsp119I TTCGAA 3 cut(s) 2025, 5242, 5543
Bsp120I GGGCCC 1 cut(s) 4104
Bsp1286I GDGCHC 9 cut(s) 342, 1660, 4108, 4262, 4431, 5135, 5994, 6376, 7039
Bsp1407I TGTACA 3 cut(s) 2354, 2404, 5964
Bsp19I CCATGG 1 cut(s) 4821
BspDI ATCGAT 2 cut(s) 72, 1240
BspFNI CGCG 5 cut(s) 234, 377, 379, 2382, 2582
BspHI TCATGA 1 cut(s) 1987
BspMAI CTGCAG 3 cut(s) 304, 757, 7398
BspMI ACCTGC 3 cut(s) 1979, 3355, 5798
BspOI GCTAGC 3 cut(s) 4175, 6201, 6795
BspQI GCTCTTC 2 cut(s) 2080, 3585
BspT104I TTCGAA 3 cut(s) 2025, 5242, 5543
BspT107I GGYRCC 1 cut(s) 1657
BspTI CTTAAG 3 cut(s) 1250, 4184, 5501
BspTNI GGTCTC 2 cut(s) 318, 736
BsrBI CCGCTC 1 cut(s) 4435
BsrDI GCAATG 3 cut(s) 2624, 4968, 5211
BsrFI RCCGGY 3 cut(s) 4080, 4209, 6504
BsrGI TGTACA 3 cut(s) 2354, 2404, 5964
BssAI RCCGGY 3 cut(s) 4080, 4209, 6504
BssNAI GTATAC 2 cut(s) 5323, 5425
BssNI GRCGYC 3 cut(s) 1710, 3263, 6746
BssSI CACGAG 1 cut(s) 1155
BssT1I CCWWGG 4 cut(s) 3885, 4003, 4821, 6379
Bst1107I GTATAC 2 cut(s) 5323, 5425
Bst2BI CACGAG 1 cut(s) 1155
BstACI GRCGYC 3 cut(s) 1710, 3263, 6746
BstAFI CTTAAG 3 cut(s) 1250, 4184, 5501
BstAPI GCANNNNNTGC 1 cut(s) 3694
BstAUI TGTACA 3 cut(s) 2354, 2404, 5964
BstBAI YACGTR 2 cut(s) 4778, 4964
BstBI TTCGAA 3 cut(s) 2025, 5242, 5543
BstDSI CCRYGG 2 cut(s) 232, 4821
BstEII GGTNACC 1 cut(s) 5831
BstFNI CGCG 5 cut(s) 234, 377, 379, 2382, 2582
BstH2I RGCGCY 1 cut(s) 6798
BstHHI GCGC 5 cut(s) 379, 2384, 3808, 4069, 6797
BstNSI RCATGY 6 cut(s) 810, 1703, 2284, 2453, 5483, 6336
BstPI GGTNACC 1 cut(s) 5831
BstSFI CTRYAG 9 cut(s) 300, 330, 753, 1224, 1460, 2808, 3278, 3987, 7394
BstSLI GKGCMC 3 cut(s) 1660, 4108, 7039
BstSNI TACGTA 1 cut(s) 4778
BstUI CGCG 5 cut(s) 234, 377, 379, 2382, 2582
BstV2I GAAGAC 2 cut(s) 1335, 5151
BstXI CCANNNNNNTGG 2 cut(s) 3257, 7031
BstZ17I GTATAC 2 cut(s) 5323, 5425
Bsu15I ATCGAT 2 cut(s) 72, 1240
Bsu36I CCTNAGG 2 cut(s) 3240, 4855
BsuI GTATCC 2 cut(s) 1490, 6973
BsuTUI ATCGAT 2 cut(s) 72, 1240
BtgI CCRYGG 2 cut(s) 232, 4821
BtrI CACGTC 2 cut(s) 4282, 5227
BtsI GCAGTG 4 cut(s) 1500, 4987, 5395, 6765
BveI ACCTGC 3 cut(s) 1979, 3355, 5798
CaiI CAGNNNCTG 3 cut(s) 299, 568, 6281
CciI TCATGA 1 cut(s) 1987
CfoI GCGC 5 cut(s) 379, 2384, 3808, 4069, 6797
Cfr10I RCCGGY 3 cut(s) 4080, 4209, 6504
Cfr42I CCGCGG 1 cut(s) 235
ClaI ATCGAT 2 cut(s) 72, 1240
CseI GACGC 3 cut(s) 656, 1699, 6735
CsiI ACCWGGT 1 cut(s) 581
CspAI ACCGGT 1 cut(s) 4209
CspCI CAANNNNNGTGG 2 cut(s) 2119, 2154
DraI TTTAAA 4 cut(s) 1867, 2217, 3544, 3825
DraIII CACNNNGTG 3 cut(s) 4532, 5002, 6347
DrdI GACNNNNNNGTC 1 cut(s) 2939
DriI GACNNNNNGTC 1 cut(s) 4873
DseDI GACNNNNNNGTC 1 cut(s) 2939
EaeI YGGCCR 3 cut(s) 2293, 6287, 6886
Eam1105I GACNNNNNGTC 1 cut(s) 4873
EciI GGCGGA 1 cut(s) 6491
Ecl136II GAGCTC 3 cut(s) 340, 4260, 5992
Eco105I TACGTA 1 cut(s) 4778
Eco130I CCWWGG 4 cut(s) 3885, 4003, 4821, 6379
Eco24I GRGCYC 6 cut(s) 342, 4108, 4262, 4431, 5135, 5994
Eco31I GGTCTC 2 cut(s) 318, 736
Eco32I GATATC 5 cut(s) 2860, 3190, 5265, 5797, 6753
Eco47III AGCGCT 1 cut(s) 6796
Eco53kI GAGCTC 3 cut(s) 340, 4260, 5992
Eco57I CTGAAG 9 cut(s) 545, 2061, 2583, 3800, 4034, 4399, 4698, 5714, 6924
Eco81I CCTNAGG 2 cut(s) 3240, 4855
Eco88I CYCGRG 2 cut(s) 4436, 7405
Eco91I GGTNACC 1 cut(s) 5831
EcoICRI GAGCTC 3 cut(s) 340, 4260, 5992
EcoO109I RGGNCCY 6 cut(s) 596, 2669, 4104, 4105, 4482, 6154
EcoO65I GGTNACC 1 cut(s) 5831
EcoRI GAATTC 3 cut(s) 2831, 4672, 5082
EcoRV GATATC 5 cut(s) 2860, 3190, 5265, 5797, 6753
EcoT14I CCWWGG 4 cut(s) 3885, 4003, 4821, 6379
EcoT22I ATGCAT 3 cut(s) 3952, 5359, 6895
EcoT38I GRGCYC 6 cut(s) 342, 4108, 4262, 4431, 5135, 5994
ErhI CCWWGG 4 cut(s) 3885, 4003, 4821, 6379
Esp3I CGTCTC 3 cut(s) 4288, 5217, 5810
FalI AAGNNNNNCTT 8 cut(s) 2164, 2196, 7232, 7264, 7311, 7343, 7372, 7404
FaqI GGGAC 9 cut(s) 1710, 2346, 2682, 2977, 3021, 3274, 3321, 4495, 4839
FauI CCCGC 4 cut(s) 1486, 2387, 2529, 4440
FauNDI CATATG 4 cut(s) 2971, 3012, 3952, 5283
FbaI TGATCA 3 cut(s) 886, 2497, 4540
FblI GTMKAC 3 cut(s) 2713, 5322, 5424
FriOI GRGCYC 6 cut(s) 342, 4108, 4262, 4431, 5135, 5994
GlaI GCGC 5 cut(s) 378, 2383, 3807, 4068, 6796
GsaI CCCAGC 2 cut(s) 4233, 7437
GsuI CTGGAG 3 cut(s) 99, 4883, 5575
HaeII RGCGCY 1 cut(s) 6798
HgaI GACGC 3 cut(s) 656, 1699, 6735
HhaI GCGC 5 cut(s) 379, 2384, 3808, 4069, 6797
Hin1I GRCGYC 3 cut(s) 1710, 3263, 6746
Hin6I GCGC 5 cut(s) 377, 2382, 3806, 4067, 6795
HinP1I GCGC 5 cut(s) 377, 2382, 3806, 4067, 6795
HincII GTYRAC 4 cut(s) 2484, 3451, 5299, 6318
HindII GTYRAC 4 cut(s) 2484, 3451, 5299, 6318
HindIII AAGCTT 6 cut(s) 2178, 4014, 5334, 5463, 5861, 5892
Hpy99I CGWCG 6 cut(s) 206, 650, 1309, 1715, 4564, 6751
HpyCH4IV ACGT 8 cut(s) 3076, 3263, 3485, 4281, 4777, 4963, 5226, 7475
HpySE526I ACGT 8 cut(s) 3076, 3263, 3485, 4281, 4777, 4963, 5226, 7475
Hsp92I GRCGYC 3 cut(s) 1710, 3263, 6746
HspAI GCGC 5 cut(s) 377, 2382, 3806, 4067, 6795
KflI GGGWCCC 2 cut(s) 2669, 4482
KroI GCCGGC 1 cut(s) 4080
KroNI GCCGGC 1 cut(s) 4082
Ksp22I TGATCA 3 cut(s) 886, 2497, 4540
KspI CCGCGG 1 cut(s) 235
LguI GCTCTTC 2 cut(s) 2080, 3585
MabI ACCWGGT 1 cut(s) 581
MaeII ACGT 8 cut(s) 3076, 3263, 3485, 4281, 4777, 4963, 5226, 7475
MbiI CCGCTC 1 cut(s) 4435
MfeI CAATTG 5 cut(s) 2925, 3085, 3444, 3737, 7018
MhlI GDGCHC 9 cut(s) 342, 1660, 4108, 4262, 4431, 5135, 5994, 6376, 7039
MlsI TGGCCA 3 cut(s) 2295, 6289, 6888
MluNI TGGCCA 3 cut(s) 2295, 6289, 6888
MmeI TCCRAC 7 cut(s) 146, 383, 1039, 1841, 6353, 6382, 6817
Mox20I TGGCCA 3 cut(s) 2295, 6289, 6888
Mph1103I ATGCAT 3 cut(s) 3952, 5359, 6895
MroNI GCCGGC 1 cut(s) 4080
MroXI GAANNNNTTC 1 cut(s) 3412
MscI TGGCCA 3 cut(s) 2295, 6289, 6888
MslI CAYNNNNRTG 6 cut(s) 422, 1986, 2454, 3054, 4884, 7029
Msp20I TGGCCA 3 cut(s) 2295, 6289, 6888
MspA1I CMGCKG 5 cut(s) 234, 635, 914, 4470, 5558
MspCI CTTAAG 3 cut(s) 1250, 4184, 5501
MssI GTTTAAAC 1 cut(s) 3544
MunI CAATTG 5 cut(s) 2925, 3085, 3444, 3737, 7018
Mva1269I GAATGC 2 cut(s) 418, 6602
MvnI CGCG 5 cut(s) 234, 377, 379, 2382, 2582
NaeI GCCGGC 1 cut(s) 4082
NciI CCSGG 3 cut(s) 466, 6139, 7430
NcoI CCATGG 1 cut(s) 4821
NdeI CATATG 4 cut(s) 2971, 3012, 3952, 5283
NgoMIV GCCGGC 1 cut(s) 4080
NheI GCTAGC 3 cut(s) 4171, 6197, 6791
NmeAIII GCCGAG 1 cut(s) 2533
NmuCI GTSAC 9 cut(s) 641, 1362, 2952, 3529, 4984, 5831, 7096, 7258, 7438
NsiI ATGCAT 3 cut(s) 3952, 5359, 6895
NspI RCATGY 6 cut(s) 810, 1703, 2284, 2453, 5483, 6336
NspV TTCGAA 3 cut(s) 2025, 5242, 5543
PaeI GCATGC 1 cut(s) 2284
PaeR7I CTCGAG 2 cut(s) 4436, 7405
PagI TCATGA 1 cut(s) 1987
PaqCI CACCTGC 2 cut(s) 3355, 5798
PciI ACATGT 4 cut(s) 806, 1699, 2449, 6332
PciSI GCTCTTC 2 cut(s) 2080, 3585
PcsI WCGNNNNNNNCGW 2 cut(s) 7128, 7509
PctI GAATGC 2 cut(s) 418, 6602
PdiI GCCGGC 1 cut(s) 4082
PdmI GAANNNNTTC 1 cut(s) 3412
PflMI CCANNNNNTGG 1 cut(s) 6296
PfoI TCCNGGA 2 cut(s) 3416, 6478
PinAI ACCGGT 1 cut(s) 4209
PmeI GTTTAAAC 1 cut(s) 3544
Ppu21I YACGTR 2 cut(s) 4778, 4964
PpuMI RGGWCCY 3 cut(s) 596, 2669, 4482
PscI ACATGT 4 cut(s) 806, 1699, 2449, 6332
PsiI TTATAA 2 cut(s) 4124, 7472
Psp124BI GAGCTC 3 cut(s) 342, 4262, 5994
Psp5II RGGWCCY 3 cut(s) 596, 2669, 4482
PspEI GGTNACC 1 cut(s) 5831
PspFI CCCAGC 2 cut(s) 4229, 7433
PspOMI GGGCCC 1 cut(s) 4104
PspPPI RGGWCCY 3 cut(s) 596, 2669, 4482
PspXI VCTCGAGB 1 cut(s) 4436
PsrI GAACNNNNNNTAC 2 cut(s) 3159, 3191
PstI CTGCAG 3 cut(s) 304, 757, 7398
PstNI CAGNNNCTG 3 cut(s) 299, 568, 6281
PvuII CAGCTG 2 cut(s) 635, 914
RseI CAYNNNNRTG 6 cut(s) 422, 1986, 2454, 3054, 4884, 7029
SacI GAGCTC 3 cut(s) 342, 4262, 5994
SacII CCGCGG 1 cut(s) 235
SapI GCTCTTC 2 cut(s) 2080, 3585
SduI GDGCHC 9 cut(s) 342, 1660, 4108, 4262, 4431, 5135, 5994, 6376, 7039
SexAI ACCWGGT 1 cut(s) 581
SfcI CTRYAG 9 cut(s) 300, 330, 753, 1224, 1460, 2808, 3278, 3987, 7394
Sfr274I CTCGAG 2 cut(s) 4436, 7405
Sfr303I CCGCGG 1 cut(s) 235
SfuI TTCGAA 3 cut(s) 2025, 5242, 5543
SgrAI CRCCGGYG 1 cut(s) 6504
SgrBI CCGCGG 1 cut(s) 235
SlaI CTCGAG 2 cut(s) 4436, 7405
SmiMI CAYNNNNRTG 6 cut(s) 422, 1986, 2454, 3054, 4884, 7029
SnaBI TACGTA 1 cut(s) 4778
SpeI ACTAGT 2 cut(s) 2915, 5692
SphI GCATGC 1 cut(s) 2284
SspI AATATT 7 cut(s) 2775, 3206, 3412, 3429, 3437, 5189, 6853
SstI GAGCTC 3 cut(s) 342, 4262, 5994
StyI CCWWGG 4 cut(s) 3885, 4003, 4821, 6379
TaiI ACGT 8 cut(s) 3079, 3266, 3488, 4284, 4780, 4966, 5229, 7478
TaqII GACCGA 2 cut(s) 760, 6758
TatI WGTACW 5 cut(s) 1638, 2354, 2404, 3955, 5964
TauI GCSGC 2 cut(s) 237, 2585
TseFI GTSAC 9 cut(s) 641, 1362, 2952, 3529, 4984, 5831, 7096, 7258, 7438
Tsp45I GTSAC 9 cut(s) 641, 1362, 2952, 3529, 4984, 5831, 7096, 7258, 7438
TspGWI ACGGA 8 cut(s) 201, 254, 267, 3763, 5421, 5630, 5834, 7329
Van91I CCANNNNNTGG 1 cut(s) 6296
Vha464I CTTAAG 3 cut(s) 1250, 4184, 5501
VneI GTGCAC 1 cut(s) 7035
XbaI TCTAGA 4 cut(s) 274, 2149, 4237, 5527
XceI RCATGY 6 cut(s) 810, 1703, 2284, 2453, 5483, 6336
XcmI CCANNNNNNNNNTGG 2 cut(s) 5949, 6297
XhoI CTCGAG 2 cut(s) 4436, 7405
XmiI GTMKAC 3 cut(s) 2713, 5322, 5424
XmnI GAANNNNTTC 1 cut(s) 3412
ZraI GACGTC 1 cut(s) 3264
Zsp2I ATGCAT 3 cut(s) 3952, 5359, 6895
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.