RAVE protein 1 C terminal
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46560 AT2G46560 AT2G46560 |
| fragaria_vesca | FvH4_7g16880 FvH4_7g16880 FvH4_7g16880 FvH4_7g16880 |
| malus_domestica | MD01G1083800.v1.1 |
| prunus_persica | Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 Prupe.2G190800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0360111 |
| rosa_laevigata | RLG00000018213 RLG00000027832 |
| rosa_multiflora | Rmu_co8378581.1_g000001 Rmu_co8408019.1_g000001 Rmu_sc0007813.1_g000007 Rmu_ssc0000368.1_g000041 |
| rosa_roxburghii | Rroxscaffold_4G00296380 |
| rosa_rugosa | Rorug01G0275200 Rorug01G0275300 |
| rosa_samantha | Rh1AG289000 Rh1BG254500 Rh1CG272000 Rh1DG283600 |
| rosa_wichuraiana | Rw1G025630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 513, 3527, 4857 |
| AarI | CACCTGC | 2 cut(s) | 1706, 2087 |
| Acc36I | ACCTGC | 2 cut(s) | 1706, 2087 |
| Acc65I | GGTACC | 1 cut(s) | 2282 |
| AccB1I | GGYRCC | 3 cut(s) | 946, 2282, 4912 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 23, 174, 3611, 5681 |
| AccBSI | CCGCTC | 1 cut(s) | 3670 |
| AccI | GTMKAC | 1 cut(s) | 632 |
| AccII | CGCG | 4 cut(s) | 2397, 2399, 4311, 6391 |
| AccIII | TCCGGA | 1 cut(s) | 2868 |
| AciI | CCGC | 8 cut(s) | 192, 3004, 3670, 4060, 5448, 5469, 6147, 6584 |
| AcoI | YGGCCR | 3 cut(s) | 5431, 5672, 6764 |
| AcuI | CTGAAG | 8 cut(s) | 1673, 3107, 3417, 4367, 4509, 4679, 4715, 4974 |
| AcyI | GRCGYC | 1 cut(s) | 5322 |
| AdeI | CACNNNGTG | 1 cut(s) | 174 |
| AflIII | ACRYGT | 6 cut(s) | 484, 4036, 4309, 5014, 5761, 6875 |
| AhlI | ACTAGT | 3 cut(s) | 77, 871, 2117 |
| AjiI | CACGTC | 1 cut(s) | 252 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 2630, 2662, 2946, 2978, 3850, 3882, 4947, 4979 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 453, 485 |
| Alw21I | GWGCWC | 1 cut(s) | 4724 |
| Alw44I | GTGCAC | 1 cut(s) | 4720 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 217, 2891, 3716, 3980, 5666 |
| Ama87I | CYCGRG | 3 cut(s) | 435, 5892, 6807 |
| Aor13HI | TCCGGA | 1 cut(s) | 2868 |
| ApaI | GGGCCC | 1 cut(s) | 1107 |
| ApaLI | GTGCAC | 1 cut(s) | 4720 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1250, 1282 |
| Asp718I | GGTACC | 1 cut(s) | 2282 |
| AspLEI | GCGC | 4 cut(s) | 2397, 2399, 6391, 6393 |
| AsuC2I | CCSGG | 2 cut(s) | 436, 437 |
| AsuNHI | GCTAGC | 1 cut(s) | 3631 |
| AvaI | CYCGRG | 3 cut(s) | 435, 5892, 6807 |
| AvaII | GGWCC | 8 cut(s) | 368, 566, 1088, 1283, 1448, 1964, 3410, 4934 |
| AxyI | CCTNAGG | 1 cut(s) | 3102 |
| BaeGI | GKGCMC | 3 cut(s) | 949, 1107, 4724 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 3969, 4002, 4737, 4770, 5706, 5739 |
| BalI | TGGCCA | 3 cut(s) | 5433, 5674, 6766 |
| BamHI | GGATCC | 2 cut(s) | 1699, 3097 |
| BanI | GGYRCC | 3 cut(s) | 946, 2282, 4912 |
| BanII | GRGCYC | 1 cut(s) | 1107 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 960, 992, 5388, 5420 |
| BauI | CACGAG | 2 cut(s) | 169, 6357 |
| BbsI | GAAGAC | 5 cut(s) | 458, 2118, 2436, 4497, 6560 |
| Bbv12I | GWGCWC | 1 cut(s) | 4724 |
| BceAI | ACGGC | 1 cut(s) | 846 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2612, 2646 |
| BciVI | GTATCC | 2 cut(s) | 1627, 6325 |
| BclI | TGATCA | 7 cut(s) | 157, 1459, 1756, 4608, 5281, 6121, 6571 |
| BcnI | CCSGG | 2 cut(s) | 436, 437 |
| BcuI | ACTAGT | 3 cut(s) | 77, 871, 2117 |
| BfmI | CTRYAG | 7 cut(s) | 186, 2094, 3660, 4324, 5054, 5331, 6213 |
| BfuAI | ACCTGC | 2 cut(s) | 1706, 2087 |
| BfuI | GTATCC | 2 cut(s) | 1627, 6325 |
| BglII | AGATCT | 2 cut(s) | 3793, 4213 |
| BlpI | GCTNAGC | 1 cut(s) | 703 |
| BmcAI | AGTACT | 1 cut(s) | 5380 |
| Bme18I | GGWCC | 8 cut(s) | 368, 566, 1088, 1283, 1448, 1964, 3410, 4934 |
| BmeT110I | CYCGRG | 3 cut(s) | 435, 5892, 6807 |
| BmgBI | CACGTC | 1 cut(s) | 252 |
| BmrI | ACTGGG | 4 cut(s) | 276, 416, 1820, 5780 |
| BmtI | GCTAGC | 1 cut(s) | 3635 |
| BmuI | ACTGGG | 4 cut(s) | 276, 416, 1820, 5780 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2607 |
| BpiI | GAAGAC | 5 cut(s) | 458, 2118, 2436, 4497, 6560 |
| BpmI | CTGGAG | 7 cut(s) | 1014, 2717, 3305, 3512, 3527, 6203, 6289 |
| Bpu10I | CCTNAGC | 2 cut(s) | 144, 5444 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 703 |
| BpuEI | CTTGAG | 5 cut(s) | 568, 1871, 4188, 4725, 5842 |
| BpuMI | CCSGG | 2 cut(s) | 436, 437 |
| Bsa29I | ATCGAT | 1 cut(s) | 6101 |
| BsaBI | GATNNNNATC | 4 cut(s) | 2887, 4212, 5637, 6576 |
| BsaHI | GRCGYC | 1 cut(s) | 5322 |
| BsaI | GGTCTC | 4 cut(s) | 2265, 3620, 5274, 5488 |
| BsaJI | CCNNGG | 7 cut(s) | 59, 434, 435, 1565, 3355, 4983, 5250 |
| BsaWI | WCCGGW | 3 cut(s) | 2868, 3152, 6489 |
| Bse118I | RCCGGY | 1 cut(s) | 3387 |
| Bse21I | CCTNAGG | 1 cut(s) | 3102 |
| Bse3DI | GCAATG | 3 cut(s) | 1917, 3113, 6282 |
| Bse8I | GATNNNNATC | 4 cut(s) | 2887, 4212, 5637, 6576 |
| BseAI | TCCGGA | 1 cut(s) | 2868 |
| BseCI | ATCGAT | 1 cut(s) | 6101 |
| BseDI | CCNNGG | 7 cut(s) | 59, 434, 435, 1565, 3355, 4983, 5250 |
| BseJI | GATNNNNATC | 4 cut(s) | 2887, 4212, 5637, 6576 |
| BseMI | GCAATG | 3 cut(s) | 1917, 3113, 6282 |
| BseMII | CTCAG | 8 cut(s) | 717, 2430, 3552, 3677, 5135, 5229, 5334, 6663 |
| BsePI | GCGCGC | 2 cut(s) | 2395, 6389 |
| BseRI | GAGGAG | 3 cut(s) | 1543, 3106, 5847 |
| BseSI | GKGCMC | 3 cut(s) | 949, 1107, 4724 |
| BsgI | GTGCAG | 2 cut(s) | 1740, 5238 |
| Bsh1236I | CGCG | 4 cut(s) | 2397, 2399, 4311, 6391 |
| BshNI | GGYRCC | 3 cut(s) | 946, 2282, 4912 |
| BshVI | ATCGAT | 1 cut(s) | 6101 |
| BsiHKAI | GWGCWC | 1 cut(s) | 4724 |
| BsiHKCI | CYCGRG | 3 cut(s) | 435, 5892, 6807 |
| BsiSI | CCGG | 5 cut(s) | 436, 2869, 3153, 3388, 6490 |
| BslFI | GGGAC | 5 cut(s) | 495, 999, 1977, 3814, 6062 |
| BsmBI | CGTCTC | 1 cut(s) | 1265 |
| BsmFI | GGGAC | 5 cut(s) | 495, 999, 1977, 3814, 6062 |
| BsmI | GAATGC | 5 cut(s) | 381, 3661, 3893, 5868, 5944 |
| Bso31I | GGTCTC | 4 cut(s) | 2265, 3620, 5274, 5488 |
| BsoBI | CYCGRG | 3 cut(s) | 435, 5892, 6807 |
| Bsp120I | GGGCCC | 1 cut(s) | 1103 |
| Bsp1286I | GDGCHC | 3 cut(s) | 949, 1107, 4724 |
| Bsp13I | TCCGGA | 1 cut(s) | 2868 |
| Bsp1407I | TGTACA | 2 cut(s) | 4149, 4540 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 703 |
| Bsp19I | CCATGG | 1 cut(s) | 1565 |
| BspACI | CCGC | 8 cut(s) | 192, 3004, 3670, 4060, 5448, 5469, 6147, 6584 |
| BspCNI | CTCAG | 8 cut(s) | 716, 2431, 3553, 3678, 5134, 5230, 5335, 6662 |
| BspDI | ATCGAT | 1 cut(s) | 6101 |
| BspEI | TCCGGA | 1 cut(s) | 2868 |
| BspFNI | CGCG | 4 cut(s) | 2397, 2399, 4311, 6391 |
| BspHI | TCATGA | 4 cut(s) | 3705, 4030, 4500, 6376 |
| BspMAI | CTGCAG | 3 cut(s) | 2098, 4328, 5058 |
| BspMI | ACCTGC | 2 cut(s) | 1706, 2087 |
| BspOI | GCTAGC | 1 cut(s) | 3635 |
| BspT107I | GGYRCC | 3 cut(s) | 946, 2282, 4912 |
| BspTNI | GGTCTC | 4 cut(s) | 2265, 3620, 5274, 5488 |
| BsrBI | CCGCTC | 1 cut(s) | 3670 |
| BsrDI | GCAATG | 3 cut(s) | 1917, 3113, 6282 |
| BsrFI | RCCGGY | 1 cut(s) | 3387 |
| BsrGI | TGTACA | 2 cut(s) | 4149, 4540 |
| BssAI | RCCGGY | 1 cut(s) | 3387 |
| BssECI | CCNNGG | 7 cut(s) | 59, 434, 435, 1565, 3355, 4983, 5250 |
| BssHII | GCGCGC | 2 cut(s) | 2395, 6389 |
| BssNAI | GTATAC | 1 cut(s) | 633 |
| BssNI | GRCGYC | 1 cut(s) | 5322 |
| BssSI | CACGAG | 2 cut(s) | 169, 6357 |
| BssT1I | CCWWGG | 4 cut(s) | 59, 1565, 3355, 4983 |
| Bst1107I | GTATAC | 1 cut(s) | 633 |
| Bst2BI | CACGAG | 2 cut(s) | 169, 6357 |
| Bst6I | CTCTTC | 6 cut(s) | 1692, 2176, 2440, 3083, 3219, 4589 |
| BstACI | GRCGYC | 1 cut(s) | 5322 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3001 |
| BstAUI | TGTACA | 2 cut(s) | 4149, 4540 |
| BstDSI | CCRYGG | 1 cut(s) | 1565 |
| BstEII | GGTNACC | 1 cut(s) | 4690 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1077 |
| BstFNI | CGCG | 4 cut(s) | 2397, 2399, 4311, 6391 |
| BstHHI | GCGC | 4 cut(s) | 2397, 2399, 6391, 6393 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 1608, 2405, 3001, 5579, 5810, 6149, 6743, 6772, 6781 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2607 |
| BstPI | GGTNACC | 1 cut(s) | 4690 |
| BstSFI | CTRYAG | 7 cut(s) | 186, 2094, 3660, 4324, 5054, 5331, 6213 |
| BstSLI | GKGCMC | 3 cut(s) | 949, 1107, 4724 |
| BstUI | CGCG | 4 cut(s) | 2397, 2399, 4311, 6391 |
| BstV2I | GAAGAC | 5 cut(s) | 458, 2118, 2436, 4497, 6560 |
| BstZ17I | GTATAC | 1 cut(s) | 633 |
| Bsu15I | ATCGAT | 1 cut(s) | 6101 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3102 |
| BsuI | GTATCC | 2 cut(s) | 1627, 6325 |
| BsuTUI | ATCGAT | 1 cut(s) | 6101 |
| BtgI | CCRYGG | 1 cut(s) | 1565 |
| BtgZI | GCGATG | 1 cut(s) | 1341 |
| BtrI | CACGTC | 1 cut(s) | 252 |
| BtsI | GCAGTG | 4 cut(s) | 3381, 3714, 5434, 6555 |
| BveI | ACCTGC | 2 cut(s) | 1706, 2087 |
| CaiI | CAGNNNCTG | 5 cut(s) | 217, 2891, 3716, 3980, 5666 |
| CciI | TCATGA | 4 cut(s) | 3705, 4030, 4500, 6376 |
| CfoI | GCGC | 4 cut(s) | 2397, 2399, 6391, 6393 |
| Cfr10I | RCCGGY | 1 cut(s) | 3387 |
| Cfr9I | CCCGGG | 1 cut(s) | 435 |
| ClaI | ATCGAT | 1 cut(s) | 6101 |
| CseI | GACGC | 3 cut(s) | 5027, 5311, 6646 |
| CsiI | ACCWGGT | 1 cut(s) | 676 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 2481, 2516, 2927, 2962, 3870, 3905 |
| DraIII | CACNNNGTG | 1 cut(s) | 174 |
| EaeI | YGGCCR | 3 cut(s) | 5431, 5672, 6764 |
| Eam1104I | CTCTTC | 6 cut(s) | 1692, 2176, 2440, 3083, 3219, 4589 |
| EarI | CTCTTC | 6 cut(s) | 1692, 2176, 2440, 3083, 3219, 4589 |
| EciI | GGCGGA | 1 cut(s) | 4049 |
| Eco130I | CCWWGG | 4 cut(s) | 59, 1565, 3355, 4983 |
| Eco147I | AGGCCT | 2 cut(s) | 4728, 5133 |
| Eco24I | GRGCYC | 1 cut(s) | 1107 |
| Eco31I | GGTCTC | 4 cut(s) | 2265, 3620, 5274, 5488 |
| Eco32I | GATATC | 3 cut(s) | 889, 6105, 6669 |
| Eco47I | GGWCC | 8 cut(s) | 368, 566, 1088, 1283, 1448, 1964, 3410, 4934 |
| Eco57I | CTGAAG | 8 cut(s) | 1673, 3107, 3417, 4367, 4509, 4679, 4715, 4974 |
| Eco81I | CCTNAGG | 1 cut(s) | 3102 |
| Eco88I | CYCGRG | 3 cut(s) | 435, 5892, 6807 |
| Eco91I | GGTNACC | 1 cut(s) | 4690 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1077 |
| EcoO109I | RGGNCCY | 5 cut(s) | 1448, 1601, 1964, 2359, 4934 |
| EcoO65I | GGTNACC | 1 cut(s) | 4690 |
| EcoRI | GAATTC | 3 cut(s) | 3138, 3840, 3862 |
| EcoRV | GATATC | 3 cut(s) | 889, 6105, 6669 |
| EcoT14I | CCWWGG | 4 cut(s) | 59, 1565, 3355, 4983 |
| EcoT22I | ATGCAT | 2 cut(s) | 4263, 6247 |
| EcoT38I | GRGCYC | 1 cut(s) | 1107 |
| ErhI | CCWWGG | 4 cut(s) | 59, 1565, 3355, 4983 |
| Esp3I | CGTCTC | 1 cut(s) | 1265 |
| FaqI | GGGAC | 5 cut(s) | 495, 999, 1977, 3814, 6062 |
| FauNDI | CATATG | 3 cut(s) | 3259, 5719, 6326 |
| FbaI | TGATCA | 7 cut(s) | 157, 1459, 1756, 4608, 5281, 6121, 6571 |
| FblI | GTMKAC | 1 cut(s) | 632 |
| FriOI | GRGCYC | 1 cut(s) | 1107 |
| GlaI | GCGC | 4 cut(s) | 2396, 2398, 6390, 6392 |
| GsuI | CTGGAG | 7 cut(s) | 1014, 2717, 3305, 3512, 3527, 6203, 6289 |
| HapII | CCGG | 5 cut(s) | 436, 2869, 3153, 3388, 6490 |
| HgaI | GACGC | 3 cut(s) | 5027, 5311, 6646 |
| HhaI | GCGC | 4 cut(s) | 2397, 2399, 6391, 6393 |
| Hin1I | GRCGYC | 1 cut(s) | 5322 |
| Hin6I | GCGC | 4 cut(s) | 2395, 2397, 6389, 6391 |
| HinP1I | GCGC | 4 cut(s) | 2395, 2397, 6389, 6391 |
| HincII | GTYRAC | 2 cut(s) | 2508, 2680 |
| HindII | GTYRAC | 2 cut(s) | 2508, 2680 |
| HindIII | AAGCTT | 3 cut(s) | 899, 3747, 6725 |
| HpaII | CCGG | 5 cut(s) | 436, 2869, 3153, 3388, 6490 |
| HpyCH4IV | ACGT | 2 cut(s) | 251, 5763 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 1608, 2405, 3001, 5579, 5810, 6149, 6743, 6772, 6781 |
| HpySE526I | ACGT | 2 cut(s) | 251, 5763 |
| Hsp92I | GRCGYC | 1 cut(s) | 5322 |
| HspAI | GCGC | 4 cut(s) | 2395, 2397, 6389, 6391 |
| KflI | GGGWCCC | 1 cut(s) | 1964 |
| Kpn2I | TCCGGA | 1 cut(s) | 2868 |
| KpnI | GGTACC | 1 cut(s) | 2286 |
| KroI | GCCGGC | 1 cut(s) | 3387 |
| KroNI | GCCGGC | 1 cut(s) | 3389 |
| Ksp22I | TGATCA | 7 cut(s) | 157, 1459, 1756, 4608, 5281, 6121, 6571 |
| MabI | ACCWGGT | 1 cut(s) | 676 |
| MaeII | ACGT | 2 cut(s) | 251, 5763 |
| MbiI | CCGCTC | 1 cut(s) | 3670 |
| MfeI | CAATTG | 3 cut(s) | 2264, 3044, 3456 |
| MhlI | GDGCHC | 3 cut(s) | 949, 1107, 4724 |
| MlsI | TGGCCA | 3 cut(s) | 5433, 5674, 6766 |
| MluI | ACGCGT | 1 cut(s) | 4309 |
| MluNI | TGGCCA | 3 cut(s) | 5433, 5674, 6766 |
| MlyI | GAGTC | 7 cut(s) | 2450, 2597, 2618, 2906, 3534, 5083, 5884 |
| MmeI | TCCRAC | 6 cut(s) | 870, 890, 1160, 5738, 5746, 6454 |
| Mox20I | TGGCCA | 3 cut(s) | 5433, 5674, 6766 |
| Mph1103I | ATGCAT | 2 cut(s) | 4263, 6247 |
| MroI | TCCGGA | 1 cut(s) | 2868 |
| MroNI | GCCGGC | 1 cut(s) | 3387 |
| MscI | TGGCCA | 3 cut(s) | 5433, 5674, 6766 |
| MslI | CAYNNNNRTG | 9 cut(s) | 1029, 2421, 4014, 4035, 4130, 5358, 6226, 6287, 6381 |
| Msp20I | TGGCCA | 3 cut(s) | 5433, 5674, 6766 |
| MspA1I | CMGCKG | 6 cut(s) | 194, 707, 1979, 3242, 6149, 6181 |
| MspI | CCGG | 5 cut(s) | 436, 2869, 3153, 3388, 6490 |
| MunI | CAATTG | 3 cut(s) | 2264, 3044, 3456 |
| Mva1269I | GAATGC | 5 cut(s) | 381, 3661, 3893, 5868, 5944 |
| MvnI | CGCG | 4 cut(s) | 2397, 2399, 4311, 6391 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 1608, 2405, 3001, 5579, 5810, 6149, 6743, 6772, 6781 |
| NaeI | GCCGGC | 1 cut(s) | 3389 |
| NciI | CCSGG | 2 cut(s) | 436, 437 |
| NcoI | CCATGG | 1 cut(s) | 1565 |
| NdeI | CATATG | 3 cut(s) | 3259, 5719, 6326 |
| NgoMIV | GCCGGC | 1 cut(s) | 3387 |
| NheI | GCTAGC | 1 cut(s) | 3631 |
| NsiI | ATGCAT | 2 cut(s) | 4263, 6247 |
| PaeI | GCATGC | 2 cut(s) | 1825, 3535 |
| PaeR7I | CTCGAG | 2 cut(s) | 5892, 6807 |
| PagI | TCATGA | 4 cut(s) | 3705, 4030, 4500, 6376 |
| PaqCI | CACCTGC | 2 cut(s) | 1706, 2087 |
| PauI | GCGCGC | 2 cut(s) | 2395, 6389 |
| PceI | AGGCCT | 2 cut(s) | 4728, 5133 |
| PciI | ACATGT | 4 cut(s) | 484, 4036, 5014, 6875 |
| PctI | GAATGC | 5 cut(s) | 381, 3661, 3893, 5868, 5944 |
| PdiI | GCCGGC | 1 cut(s) | 3389 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 23, 174, 3611, 5681 |
| PfoI | TCCNGGA | 3 cut(s) | 370, 471, 5857 |
| PleI | GAGTC | 7 cut(s) | 2449, 2597, 2618, 2906, 3534, 5083, 5884 |
| PpsI | GAGTC | 7 cut(s) | 2449, 2597, 2618, 2906, 3534, 5083, 5884 |
| PpuMI | RGGWCCY | 3 cut(s) | 1448, 1964, 4934 |
| PscI | ACATGT | 4 cut(s) | 484, 4036, 5014, 6875 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2607 |
| PsiI | TTATAA | 3 cut(s) | 513, 3527, 4857 |
| Psp5II | RGGWCCY | 3 cut(s) | 1448, 1964, 4934 |
| PspEI | GGTNACC | 1 cut(s) | 4690 |
| PspOMI | GGGCCC | 1 cut(s) | 1103 |
| PspPPI | RGGWCCY | 3 cut(s) | 1448, 1964, 4934 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 6888, 6920 |
| PstI | CTGCAG | 3 cut(s) | 2098, 4328, 5058 |
| PstNI | CAGNNNCTG | 5 cut(s) | 217, 2891, 3716, 3980, 5666 |
| PteI | GCGCGC | 2 cut(s) | 2395, 6389 |
| PvuII | CAGCTG | 4 cut(s) | 707, 1979, 3242, 6181 |
| RseI | CAYNNNNRTG | 9 cut(s) | 1029, 2421, 4014, 4035, 4130, 5358, 6226, 6287, 6381 |
| ScaI | AGTACT | 1 cut(s) | 5380 |
| SchI | GAGTC | 7 cut(s) | 2450, 2597, 2618, 2906, 3534, 5083, 5884 |
| SduI | GDGCHC | 3 cut(s) | 949, 1107, 4724 |
| SexAI | ACCWGGT | 1 cut(s) | 676 |
| SfcI | CTRYAG | 7 cut(s) | 186, 2094, 3660, 4324, 5054, 5331, 6213 |
| Sfr274I | CTCGAG | 2 cut(s) | 5892, 6807 |
| SinI | GGWCC | 8 cut(s) | 368, 566, 1088, 1283, 1448, 1964, 3410, 4934 |
| SlaI | CTCGAG | 2 cut(s) | 5892, 6807 |
| SmaI | CCCGGG | 1 cut(s) | 437 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 1029, 2421, 4014, 4035, 4130, 5358, 6226, 6287, 6381 |
| SmlI | CTYRAG | 7 cut(s) | 547, 1850, 4203, 4740, 5821, 5892, 6807 |
| SmoI | CTYRAG | 7 cut(s) | 547, 1850, 4203, 4740, 5821, 5892, 6807 |
| SpeI | ACTAGT | 3 cut(s) | 77, 871, 2117 |
| SphI | GCATGC | 2 cut(s) | 1825, 3535 |
| SseBI | AGGCCT | 2 cut(s) | 4728, 5133 |
| SsiI | CCGC | 8 cut(s) | 192, 3004, 3670, 4060, 5448, 5469, 6147, 6584 |
| SspI | AATATT | 4 cut(s) | 4185, 6205, 6568, 6926 |
| StuI | AGGCCT | 2 cut(s) | 4728, 5133 |
| StyI | CCWWGG | 4 cut(s) | 59, 1565, 3355, 4983 |
| TaiI | ACGT | 2 cut(s) | 254, 5766 |
| TaqI | TCGA | 8 cut(s) | 201, 408, 1837, 2477, 5893, 6101, 6408, 6808 |
| TaqII | GACCGA | 1 cut(s) | 356 |
| TatI | WGTACW | 4 cut(s) | 760, 4149, 4540, 5378 |
| TauI | GCSGC | 1 cut(s) | 194 |
| TspGWI | ACGGA | 2 cut(s) | 138, 3887 |
| TspMI | CCCGGG | 1 cut(s) | 435 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 23, 174, 3611, 5681 |
| VneI | GTGCAC | 1 cut(s) | 4720 |
| VpaK11BI | GGWCC | 8 cut(s) | 368, 566, 1088, 1283, 1448, 1964, 3410, 4934 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1077 |
| XbaI | TCTAGA | 1 cut(s) | 5411 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 218, 853, 3922, 5682 |
| XhoI | CTCGAG | 2 cut(s) | 5892, 6807 |
| XmaI | CCCGGG | 1 cut(s) | 435 |
| XmiI | GTMKAC | 1 cut(s) | 632 |
| ZrmI | AGTACT | 1 cut(s) | 5380 |
| Zsp2I | ATGCAT | 2 cut(s) | 4263, 6247 |