Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0014741

Physical Location & Seq

Genomic Coordinates Reverse (-)

23130101 .. 23131624

Gene Structure 1524 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G192100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 879 bp

ATGGGAAGGGCTCCTTGTTGTTCTAAGGTTGGTTTGCATAGAGGTCCATGGACTCCTAGAGAAGACACATTGCTCACCAAGTATATTGAAGCTCATGGGGAAGGCCATTGGAGATCCATGCCCAAAAAAGCTGGCCTCCTTAGGTGTGGGAAGAGTTGCAGGCTGAGGTGGATGAACTATTTAAGACCAGACATAAAGAGAGGCAACATAACCCCAGATGAAGATGACCTAATTGTCAGACTACATTCACTTCTGGGCAACCGTTGGTCTCTCATCGCCGGTAGGCTTCCGGGTCGAACCGATAACGAGATCAAGAATTACTGGAACACCCATCTTAGCAAAAAACTCAGAAGCCAAGGCACCGACCCAAGCACCCACAAGAAATTATCTGAGCCTGTGGTCAAAGAAAATAAAAGGAGAAAGAACCAAAAAACCAAGAACAACATGAACAAGAAGGAGATGGTGGTGAAAAACAAGAACAAAACAGGTCAACATGTGGAGCCACTAAAGCCTAAAGTTCACCTCCCAAAACCCACTAGGGTAACTTCCTTTCTATCCCTGCAAAGAAATGACAGTTTTACTAGTAGCACCACCACCACTACTACAACCACTTCAAGCCAAGACTTAAAAGGAGGAGGAGGAGCTTTTGGTATCAATGAAAATGATCAAGTTTTAGTTAATACTCGGGCCAATGGGATTGTGTTTTGTGTTGGTGATGATCAAGATCAAGATCAAGTACCCAATTCAGCTGATGATAATGATCATACGCTTGAAAATCTTTATGAAGAATATCTGCAGGCGCTGCTGAAGACAGATCATCATCATGATCATCAGAACCAACTTGAATTAGACTCATTTGCTGAGTCACTGCTGATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009987 GO:0010026 GO:0010090 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0048316 GO:0048354 GO:0048359 GO:0048468 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071840 GO:0080090 GO:0090558 GO:0090626 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

293

Amino Acids

33.18

Weight (kDa)

9.34

Isoelectric Point (pI)

40.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014741)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g15200 FvH4_7g16990
malus_domestica	MD01G1084400.v1.1 MD07G1153200.v1.1
prunus_persica	Prupe.2G192100_v2.0.a1
pyrus_communis	pycom07g15110
rosa_chinensis	RchiOBHm_Chr1g0360311
rosa_laevigata	RLG00000027815
rosa_multiflora	Rmu_ssc0000368.1_g000058
rosa_roxburghii	Rroxscaffold_4G00296250
rosa_rugosa	Rorug01G0276300
rosa_samantha	Rh1AG290100 Rh1BG255500 Rh1CG273100 Rh1DG285200
rosa_wichuraiana	Rw0G022430 Rw0G022440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	233
AccB1I	GGYRCC	1 cut(s)	359
AclWI	GGATC	1 cut(s)	108
AcuI	CTGAAG	1 cut(s)	827
AfaI	GTAC	1 cut(s)	738
AflIII	ACRYGT	1 cut(s)	493
AgsI	TTSAA	4 cut(s)	89, 615, 773, 845
AhlI	ACTAGT	1 cut(s)	581
AluBI	AGCT	4 cut(s)	92, 131, 644, 749
AluI	AGCT	4 cut(s)	92, 131, 644, 749
Alw26I	GTCTC	1 cut(s)	273
AlwI	GGATC	1 cut(s)	108
AlwNI	CAGNNNCTG	1 cut(s)	802
Ama87I	CYCGRG	1 cut(s)	684
AoxI	GGCC	3 cut(s)	103, 133, 687
ApeKI	GCWGC	1 cut(s)	802
AspLEI	GCGC	1 cut(s)	802
AspS9I	GGNCC	2 cut(s)	44, 687
AsuC2I	CCSGG	1 cut(s)	291
AsuHPI	GGTGA	4 cut(s)	67, 478, 512, 725
AvaI	CYCGRG	1 cut(s)	684
AvaII	GGWCC	1 cut(s)	44
AxyI	CCTNAGG	1 cut(s)	140
BanI	GGYRCC	1 cut(s)	359
BanII	GRGCYC	1 cut(s)	13
BbsI	GAAGAC	2 cut(s)	69, 815
BbvCI	CCTCAGC	1 cut(s)	164
BbvI	GCAGC	1 cut(s)	789
BccI	CCATC	2 cut(s)	339, 454
BclI	TGATCA	4 cut(s)	664, 718, 760, 826
BcnI	CCSGG	1 cut(s)	291
BcoDI	GTCTC	1 cut(s)	273
BcuI	ACTAGT	1 cut(s)	581
BfaI	CTAG	3 cut(s)	57, 537, 582
BfmI	CTRYAG	1 cut(s)	794
BfoI	RGCGCY	1 cut(s)	803
BisI	GCNGC	1 cut(s)	803
BlsI	GCNGC	1 cut(s)	804
Bme1390I	CCNGG	1 cut(s)	291
Bme18I	GGWCC	1 cut(s)	44
BmeT110I	CYCGRG	1 cut(s)	684
BmgT120I	GGNCC	2 cut(s)	44, 687
BmiI	GGNNCC	3 cut(s)	12, 361, 501
BmrFI	CCNGG	1 cut(s)	291
BpiI	GAAGAC	2 cut(s)	69, 815
Bpu10I	CCTNAGC	1 cut(s)	164
BpuMI	CCSGG	1 cut(s)	291
BsaBI	GATNNNNATC	4 cut(s)	723, 729, 759, 819
BsaI	GGTCTC	1 cut(s)	273
BsaJI	CCNNGG	2 cut(s)	47, 355
Bse118I	RCCGGY	1 cut(s)	278
Bse1I	ACTGG	1 cut(s)	326
Bse21I	CCTNAGG	1 cut(s)	140
Bse3DI	GCAATG	1 cut(s)	68
Bse8I	GATNNNNATC	4 cut(s)	723, 729, 759, 819
BseDI	CCNNGG	2 cut(s)	47, 355
BseGI	GGATG	1 cut(s)	177
BseJI	GATNNNNATC	4 cut(s)	723, 729, 759, 819
BseMI	GCAATG	1 cut(s)	68
BseMII	CTCAG	4 cut(s)	155, 361, 381, 852
BseNI	ACTGG	1 cut(s)	326
BseRI	GAGGAG	3 cut(s)	648, 651, 654
BseXI	GCAGC	1 cut(s)	789
BshFI	GGCC	3 cut(s)	105, 135, 689
BshNI	GGYRCC	1 cut(s)	359
BsiHKCI	CYCGRG	1 cut(s)	684
BsiSI	CCGG	2 cut(s)	279, 290
BsmAI	GTCTC	1 cut(s)	273
BsnI	GGCC	3 cut(s)	105, 135, 689
Bso31I	GGTCTC	1 cut(s)	273
BsoBI	CYCGRG	1 cut(s)	684
Bsp1286I	GDGCHC	1 cut(s)	13
Bsp143I	GATC	9 cut(s)	113, 309, 664, 718, 724, 730, 760, 814, 826
Bsp19I	CCATGG	1 cut(s)	47
BspANI	GGCC	3 cut(s)	105, 135, 689
BspCNI	CTCAG	4 cut(s)	156, 360, 382, 853
BspHI	TCATGA	1 cut(s)	823
BspLI	GGNNCC	3 cut(s)	12, 361, 501
BspMAI	CTGCAG	1 cut(s)	798
BspPI	GGATC	1 cut(s)	108
BspT107I	GGYRCC	1 cut(s)	359
BspTNI	GGTCTC	1 cut(s)	273
BsrDI	GCAATG	1 cut(s)	68
BsrFI	RCCGGY	1 cut(s)	278
BsrI	ACTGG	1 cut(s)	326
BssAI	RCCGGY	1 cut(s)	278
BssECI	CCNNGG	2 cut(s)	47, 355
BssMI	GATC	9 cut(s)	113, 309, 664, 718, 724, 730, 760, 814, 826
BssT1I	CCWWGG	2 cut(s)	47, 355
Bst4CI	ACNGT	2 cut(s)	263, 575
Bst6I	CTCTTC	1 cut(s)	146
BstAPI	GCANNNNNTGC	1 cut(s)	802
BstC8I	GCNNGC	3 cut(s)	133, 161, 798
BstDEI	CTNAG	7 cut(s)	24, 140, 164, 335, 347, 390, 861
BstDSI	CCRYGG	1 cut(s)	47
BstF5I	GGATG	1 cut(s)	177
BstH2I	RGCGCY	1 cut(s)	803
BstHHI	GCGC	1 cut(s)	802
BstKTI	GATC	9 cut(s)	116, 312, 667, 721, 727, 733, 763, 817, 829
BstMAI	GTCTC	1 cut(s)	273
BstMBI	GATC	9 cut(s)	113, 309, 664, 718, 724, 730, 760, 814, 826
BstMWI	GCNNNNNNNGC	2 cut(s)	508, 802
BstNSI	RCATGY	1 cut(s)	497
BstSCI	CCNGG	1 cut(s)	289
BstSFI	CTRYAG	1 cut(s)	794
BstV1I	GCAGC	1 cut(s)	789
BstV2I	GAAGAC	2 cut(s)	69, 815
BstX2I	RGATCY	1 cut(s)	113
BstYI	RGATCY	1 cut(s)	113
Bsu36I	CCTNAGG	1 cut(s)	140
BsuRI	GGCC	3 cut(s)	105, 135, 689
BtgI	CCRYGG	1 cut(s)	47
BtgZI	GCGATG	1 cut(s)	259
BtsCI	GGATG	1 cut(s)	177
BtsI	GCAGTG	1 cut(s)	866
BtsIMutI	CAGTG	1 cut(s)	866
Cac8I	GCNNGC	3 cut(s)	133, 161, 798
CaiI	CAGNNNCTG	1 cut(s)	802
CciI	TCATGA	1 cut(s)	823
CfoI	GCGC	1 cut(s)	802
Cfr10I	RCCGGY	1 cut(s)	278
Cfr13I	GGNCC	2 cut(s)	44, 687
Csp6I	GTAC	1 cut(s)	737
CviAII	CATG	6 cut(s)	48, 95, 118, 445, 494, 824
CviQI	GTAC	1 cut(s)	737
DdeI	CTNAG	7 cut(s)	24, 140, 164, 335, 347, 390, 861
DpnI	GATC	9 cut(s)	115, 311, 666, 720, 726, 732, 762, 816, 828
DpnII	GATC	9 cut(s)	113, 309, 664, 718, 724, 730, 760, 814, 826
DrdI	GACNNNNNNGTC	1 cut(s)	233
DseDI	GACNNNNNNGTC	1 cut(s)	233
Eam1104I	CTCTTC	1 cut(s)	146
EarI	CTCTTC	1 cut(s)	146
Eco130I	CCWWGG	2 cut(s)	47, 355
Eco24I	GRGCYC	1 cut(s)	13
Eco31I	GGTCTC	1 cut(s)	273
Eco47I	GGWCC	1 cut(s)	44
Eco57I	CTGAAG	1 cut(s)	827
Eco81I	CCTNAGG	1 cut(s)	140
Eco88I	CYCGRG	1 cut(s)	684
EcoT14I	CCWWGG	2 cut(s)	47, 355
EcoT38I	GRGCYC	1 cut(s)	13
ErhI	CCWWGG	2 cut(s)	47, 355
FaeI	CATG	6 cut(s)	51, 98, 121, 448, 497, 827
FalI	AAGNNNNNCTT	1 cut(s)	30
FatI	CATG	6 cut(s)	47, 94, 117, 444, 493, 823
FbaI	TGATCA	4 cut(s)	664, 718, 760, 826
Fnu4HI	GCNGC	1 cut(s)	803
FokI	GGATG	1 cut(s)	184
FriOI	GRGCYC	1 cut(s)	13
Fsp4HI	GCNGC	1 cut(s)	803
FspBI	CTAG	3 cut(s)	57, 537, 582
GlaI	GCGC	1 cut(s)	801
GluI	GCNGC	1 cut(s)	803
HaeII	RGCGCY	1 cut(s)	803
HaeIII	GGCC	3 cut(s)	105, 135, 689
HapII	CCGG	2 cut(s)	279, 290
HhaI	GCGC	1 cut(s)	802
Hin1II	CATG	6 cut(s)	51, 98, 121, 448, 497, 827
Hin6I	GCGC	1 cut(s)	800
HinP1I	GCGC	1 cut(s)	800
HincII	GTYRAC	1 cut(s)	491
HindII	GTYRAC	1 cut(s)	491
HinfI	GANTC	3 cut(s)	52, 851, 863
HpaII	CCGG	2 cut(s)	279, 290
HphI	GGTGA	4 cut(s)	67, 478, 512, 725
Hpy166II	GTNNAC	2 cut(s)	491, 520
Hpy188I	TCNGA	4 cut(s)	239, 350, 391, 834
Hpy188III	TCNNGA	4 cut(s)	313, 722, 728, 824
Hpy8I	GTNNAC	2 cut(s)	491, 520
HpyAV	CCTTC	2 cut(s)	95, 448
HpyCH4III	ACNGT	2 cut(s)	263, 575
HpyCH4V	TGCA	4 cut(s)	37, 159, 562, 796
HpyF10VI	GCNNNNNNNGC	2 cut(s)	508, 802
HpyF3I	CTNAG	7 cut(s)	24, 140, 164, 335, 347, 390, 861
Hsp92II	CATG	6 cut(s)	51, 98, 121, 448, 497, 827
HspAI	GCGC	1 cut(s)	800
Ksp22I	TGATCA	4 cut(s)	664, 718, 760, 826
Kzo9I	GATC	9 cut(s)	113, 309, 664, 718, 724, 730, 760, 814, 826
LmnI	GCTCC	3 cut(s)	16, 499, 641
Lsp1109I	GCAGC	1 cut(s)	789
MaeI	CTAG	3 cut(s)	57, 537, 582
MaeIII	GTNAC	2 cut(s)	541, 864
MalI	GATC	9 cut(s)	115, 311, 666, 720, 726, 732, 762, 816, 828
MboI	GATC	9 cut(s)	113, 309, 664, 718, 724, 730, 760, 814, 826
MboII	GAAGA	5 cut(s)	74, 163, 233, 797, 820
MflI	RGATCY	1 cut(s)	113
MhlI	GDGCHC	1 cut(s)	13
MluCI	AATT	5 cut(s)	231, 316, 383, 742, 845
MlyI	GAGTC	3 cut(s)	46, 845, 872
MnlI	CCTC	8 cut(s)	35, 146, 159, 194, 533, 626, 629, 632
MseI	TTAA	3 cut(s)	182, 626, 678
MslI	CAYNNNNRTG	1 cut(s)	822
MspA1I	CMGCKG	1 cut(s)	749
MspI	CCGG	2 cut(s)	279, 290
MspR9I	CCNGG	1 cut(s)	291
MwoI	GCNNNNNNNGC	2 cut(s)	508, 802
NciI	CCSGG	1 cut(s)	291
NcoI	CCATGG	1 cut(s)	47
NdeII	GATC	9 cut(s)	113, 309, 664, 718, 724, 730, 760, 814, 826
NlaIII	CATG	6 cut(s)	51, 98, 121, 448, 497, 827
NlaIV	GGNNCC	3 cut(s)	12, 361, 501
NmuCI	GTSAC	1 cut(s)	864
NspI	RCATGY	1 cut(s)	497
PagI	TCATGA	1 cut(s)	823
PciI	ACATGT	1 cut(s)	493
PkrI	GCNGC	1 cut(s)	804
PleI	GAGTC	3 cut(s)	46, 845, 871
PpsI	GAGTC	3 cut(s)	46, 845, 871
PscI	ACATGT	1 cut(s)	493
PspN4I	GGNNCC	3 cut(s)	12, 361, 501
PspPI	GGNCC	2 cut(s)	44, 687
PstI	CTGCAG	1 cut(s)	798
PstNI	CAGNNNCTG	1 cut(s)	802
PsuI	RGATCY	1 cut(s)	113
PvuII	CAGCTG	1 cut(s)	749
RsaI	GTAC	1 cut(s)	738
RsaNI	GTAC	1 cut(s)	737
RseI	CAYNNNNRTG	1 cut(s)	822
SaqAI	TTAA	3 cut(s)	182, 626, 678
SatI	GCNGC	1 cut(s)	803
Sau3AI	GATC	9 cut(s)	113, 309, 664, 718, 724, 730, 760, 814, 826
Sau96I	GGNCC	2 cut(s)	44, 687
SchI	GAGTC	3 cut(s)	46, 845, 872
ScrFI	CCNGG	1 cut(s)	291
SduI	GDGCHC	1 cut(s)	13
SfcI	CTRYAG	1 cut(s)	794
SinI	GGWCC	1 cut(s)	44
SmiMI	CAYNNNNRTG	1 cut(s)	822
SpeI	ACTAGT	1 cut(s)	581
Sse9I	AATT	5 cut(s)	231, 316, 383, 742, 845
SspMI	CTAG	3 cut(s)	57, 537, 582
StyD4I	CCNGG	1 cut(s)	289
StyI	CCWWGG	2 cut(s)	47, 355
TaaI	ACNGT	2 cut(s)	263, 575
TaqI	TCGA	1 cut(s)	295
TasI	AATT	5 cut(s)	231, 316, 383, 742, 845
Tru1I	TTAA	3 cut(s)	182, 626, 678
Tru9I	TTAA	3 cut(s)	182, 626, 678
TscAI	CASTG	1 cut(s)	873
TseFI	GTSAC	1 cut(s)	864
TseI	GCWGC	1 cut(s)	802
Tsp45I	GTSAC	1 cut(s)	864
TspDTI	ATGAA	5 cut(s)	188, 234, 461, 672, 798
TspRI	CASTG	1 cut(s)	873
VpaK11BI	GGWCC	1 cut(s)	44
XceI	RCATGY	1 cut(s)	497
XspI	CTAG	3 cut(s)	57, 537, 582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.