Prupe.2G255400_v2.0.a1

Belongs to the histidine acid phosphatase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0012909
Physical Location & Seq
Reverse (-)
26783219 .. 26787734
4516 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G255400.2

Sequence Viewer

Length: 1488 bp
ATGAAGCGGGCCATGGCGGCTGTTCTGCTAGTATTATTAACGCTACTCGTTCATTCAAATGCCGAAGAAGAAGCTTTCGATGTTCGCCATCACCTTTCTACTGTTTCCAGATACGGTGTCGTTAAAGGCATTGCGGACAGTTCATTTGTTCCATCGAAGATTCCAAATGGATGTACTCCCATCCACTTAAATCTTGTGGCAAGGCATGGAACTCGTTCTCCTACCAAAAAGCGGATTAAAGAGTTGGACAACTTGGCAACTCATCTGGAGGTTTTACTGAGAGAAGCTGAAGAACAGAACCTGTCTTTGGAAAAACTTCCTGGTTGGTTAAAGGGTTGGAAATCTCCTTGGAAAGGAAAACTGAAAGGTGGAGAATTAATTATCCAAGGAGAGGATGAACTCTATGATCTTGGGATCAGGACTCGAGCAAGATTTCCAAATTTGTTTAATGATGATTACCATCCAGATGTTTATGCAATAAAGGCAACACAGGTCCCTCGGGCATCAGCCAGTGCTGTGGCATTTGGCATGGGATTGTTTAGTGGGAAAGGAAGTCTTGGACCAGGGCGTCATCGAGCTTTTGCTGTAATCAGTGAAAGCCGTGCAAGTGATACAAAGCTAAGGTTTCATGATTGTTGCCAAAACTACAAGGCATTTAAGAAAAGTCAGGAGCCTGCTGTTGATAAGCTTAAGGAACCTGTTTATGATGAAATAACTTCAGCATTAAGAAGGCGCTACAGGTTGAATTTTACAAGGCAGGATACAACTTCTCTGTGGTTTCTGTGCAAACAGGAAGCGTCCTTGTTGAATATAGTTGATCAAGCTTGTGCACTTTTAAGCCCTTCTGAGGTTTCTTTGCTGGAATGGACAGATGATTTGGAGGCCTTTATATTAAAGGGATATGGTAAATCAATAAACTATAGAATGGGAGTGCCCTTACTTGAAGATGTTGTGCAGTCCATGGAGCAGGCTATTAAGGCTGAAGAAGAAAAACATGCTCCTGGTAGTTATGAGAAGGCGAGACTAAGGTTCGCACATGCAGAAACTGTCATTCCATTTTCATGCCTACTTGGACTTTTTCTTGACGGATCTGAATTTGAAAAAATACAGAGGGAACAGGCCTTGCCACACCCTCCAAAGCCTCCCCAGAAGAGAAATTGGAGGGGCCATACTGTGGCACCTTTTGGTGGGAATAACATGCTGGTTCTGTACAGTTGTCCAGCCAACACATCAAACAAGCACTTTGTGCGAGTGCTGCACAATGAACATCCCATTCCAATGCCAGGTTGTGATGGTACTGATTTCTGTCCACTTGATGTGTTTAAGGAAAGAATTGTTGCTCCTCATTTGAAGCATGACTATAATTCTATGTGCGATGTAAAACTAGAACAACAGGAGCAGAAGCCTGTTGCTAGTAAGTTATCTCAACTGTTCCCTTGGATGTTCTCACTGGGGAATGGTGATAAAAGTTCCCTCGATGAATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko00562 ko01100 map00010 map00562 map01100
Pfam Domains
Protein Families
His_Phos_2

Protein Analysis

496

Amino Acids

55.71

Weight (kDa)

8.39

Isoelectric Point (pI)

41.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012909)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09870
fragaria_vesca FvH4_7g25060 FvH4_7g25060
malus_domestica MD01G1157500.v1.1
prunus_persica Prupe.2G255400_v2.0.a1 Prupe.2G255400_v2.0.a1
pyrus_communis pycom01g17420
rosa_chinensis RchiOBHm_Chr1g0370931
rosa_laevigata RLG00000026998
rosa_multiflora Rmu_sc0001018.1_g000003
rosa_roxburghii Rroxscaffold_4G00286120
rosa_rugosa Rorug01G0360200 Rorug01G0360200
rosa_samantha Rh1AG370300 Rh1BG333900 Rh1CG347200 Rh1DG365100
rosa_wichuraiana Rw1G032590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 567
AccB1I GGYRCC 1 cut(s) 1177
AccB7I CCANNNNNTGG 1 cut(s) 1174
AciI CCGC 4 cut(s) 7, 17, 134, 232
AclWI GGATC 2 cut(s) 422, 1096
AcsI RAATTY 3 cut(s) 439, 745, 1094
AcuI CTGAAG 3 cut(s) 309, 702, 1002
AcyI GRCGYC 1 cut(s) 568
AdeI CACNNNGTG 1 cut(s) 1246
AfaI GTAC 3 cut(s) 175, 1211, 1297
AfiI CCNNNNNNNGG 8 cut(s) 231, 307, 353, 391, 847, 1174, 1187, 1283
AflII CTTAAG 1 cut(s) 689
AgsI TTSAA 6 cut(s) 57, 745, 808, 944, 1100, 1351
AjnI CCWGG 4 cut(s) 319, 562, 1000, 1282
AjuI GAANNNNNNNTTGG 2 cut(s) 290, 322
AloI GAACNNNNNNTCC 2 cut(s) 202, 234
AluBI AGCT 6 cut(s) 74, 287, 578, 619, 688, 824
AluI AGCT 6 cut(s) 74, 287, 578, 619, 688, 824
Alw21I GWGCWC 1 cut(s) 832
Alw26I GTCTC 1 cut(s) 1015
Alw44I GTGCAC 1 cut(s) 828
AlwI GGATC 2 cut(s) 422, 1096
AlwNI CAGNNNCTG 2 cut(s) 301, 1046
Ama87I CYCGRG 2 cut(s) 423, 498
AoxI GGCC 4 cut(s) 9, 882, 1119, 1165
ApaLI GTGCAC 1 cut(s) 828
ApeKI GCWGC 1 cut(s) 1255
ApoI RAATTY 3 cut(s) 439, 745, 1094
ArsI GACNNNNNNTTYG 4 cut(s) 128, 160, 859, 891
AseI ATTAAT 1 cut(s) 377
Asp700I GAANNNNTTC 2 cut(s) 214, 315
AspLEI GCGC 1 cut(s) 735
AspS9I GGNCC 4 cut(s) 9, 493, 560, 1165
AsuHPI GGTGA 2 cut(s) 83, 1472
AvaI CYCGRG 2 cut(s) 423, 498
AvaII GGWCC 2 cut(s) 493, 560
BaeGI GKGCMC 2 cut(s) 832, 936
BanI GGYRCC 1 cut(s) 1177
Bbv12I GWGCWC 1 cut(s) 832
BbvI GCAGC 1 cut(s) 1242
BccI CCATC 5 cut(s) 96, 160, 188, 468, 1286
BceAI ACGGC 1 cut(s) 585
BcgI CGANNNNNNTGC 2 cut(s) 194, 228
BciT130I CCWGG 4 cut(s) 321, 564, 1002, 1284
BciVI GTATCC 1 cut(s) 754
BclI TGATCA 1 cut(s) 817
BcoDI GTCTC 1 cut(s) 1015
BfaI CTAG 3 cut(s) 29, 1385, 1413
BfmI CTRYAG 2 cut(s) 736, 919
BfoI RGCGCY 1 cut(s) 736
BfrI CTTAAG 1 cut(s) 689
BfuI GTATCC 1 cut(s) 754
BglI GCCNNNNNGGC 1 cut(s) 17
BisI GCNGC 2 cut(s) 18, 1256
BlsI GCNGC 2 cut(s) 19, 1257
Bme1390I CCNGG 4 cut(s) 321, 564, 1002, 1284
Bme18I GGWCC 2 cut(s) 493, 560
BmeT110I CYCGRG 2 cut(s) 423, 498
BmgT120I GGNCC 4 cut(s) 9, 493, 560, 1165
BmiI GGNNCC 5 cut(s) 495, 672, 696, 1166, 1179
BmrFI CCNGG 4 cut(s) 321, 564, 1002, 1284
BmrI ACTGGG 1 cut(s) 1460
BmsI GCATC 1 cut(s) 512
BmuI ACTGGG 1 cut(s) 1460
BpmI CTGGAG 1 cut(s) 287
Bpu10I CCTNAGC 1 cut(s) 620
BsaBI GATNNNNATC 1 cut(s) 459
BsaHI GRCGYC 1 cut(s) 568
BsaJI CCNNGG 7 cut(s) 12, 347, 385, 497, 563, 960, 1436
BsaXI ACNNNNNCTCC 2 cut(s) 202, 232
Bsc4I CCNNNNNNNGG 8 cut(s) 231, 307, 353, 391, 847, 1174, 1187, 1283
Bse1I ACTGG 2 cut(s) 510, 1455
Bse3DI GCAATG 1 cut(s) 129
Bse8I GATNNNNATC 1 cut(s) 459
BseBI CCWGG 4 cut(s) 321, 564, 1002, 1284
BseDI CCNNGG 7 cut(s) 12, 347, 385, 497, 563, 960, 1436
BseGI GGATG 6 cut(s) 176, 180, 400, 460, 1267, 1446
BseJI GATNNNNATC 1 cut(s) 459
BseLI CCNNNNNNNGG 8 cut(s) 231, 307, 353, 391, 847, 1174, 1187, 1283
BseMI GCAATG 1 cut(s) 129
BseMII CTCAG 2 cut(s) 269, 837
BseNI ACTGG 2 cut(s) 510, 1455
BseRI GAGGAG 1 cut(s) 1332
BseSI GKGCMC 2 cut(s) 832, 936
BseXI GCAGC 1 cut(s) 1242
BsgI GTGCAG 2 cut(s) 974, 1241
BshFI GGCC 4 cut(s) 11, 884, 1121, 1167
BshNI GGYRCC 1 cut(s) 1177
BsiHKAI GWGCWC 1 cut(s) 832
BsiHKCI CYCGRG 2 cut(s) 423, 498
BslFI GGGAC 1 cut(s) 479
BslI CCNNNNNNNGG 8 cut(s) 231, 307, 353, 391, 847, 1174, 1187, 1283
BsmAI GTCTC 1 cut(s) 1015
BsmFI GGGAC 1 cut(s) 479
BsnI GGCC 4 cut(s) 11, 884, 1121, 1167
BsoBI CYCGRG 2 cut(s) 423, 498
Bsp1286I GDGCHC 2 cut(s) 832, 936
Bsp1407I TGTACA 1 cut(s) 1209
Bsp143I GATC 4 cut(s) 406, 414, 817, 1088
Bsp19I CCATGG 2 cut(s) 12, 960
BspACI CCGC 4 cut(s) 7, 17, 134, 232
BspANI GGCC 4 cut(s) 11, 884, 1121, 1167
BspCNI CTCAG 2 cut(s) 270, 838
BspHI TCATGA 1 cut(s) 628
BspLI GGNNCC 5 cut(s) 495, 672, 696, 1166, 1179
BspPI GGATC 2 cut(s) 422, 1096
BspT107I GGYRCC 1 cut(s) 1177
BspTI CTTAAG 1 cut(s) 689
BsrDI GCAATG 1 cut(s) 129
BsrGI TGTACA 1 cut(s) 1209
BsrI ACTGG 2 cut(s) 510, 1455
BssECI CCNNGG 7 cut(s) 12, 347, 385, 497, 563, 960, 1436
BssMI GATC 4 cut(s) 406, 414, 817, 1088
BssNI GRCGYC 1 cut(s) 568
BssT1I CCWWGG 5 cut(s) 12, 347, 385, 960, 1436
Bst2UI CCWGG 4 cut(s) 321, 564, 1002, 1284
Bst4CI ACNGT 7 cut(s) 103, 116, 140, 1048, 1174, 1214, 1431
Bst6I CTCTTC 1 cut(s) 1145
BstACI GRCGYC 1 cut(s) 568
BstAFI CTTAAG 1 cut(s) 689
BstAPI GCANNNNNTGC 1 cut(s) 1246
BstAUI TGTACA 1 cut(s) 1209
BstC8I GCNNGC 3 cut(s) 9, 675, 969
BstDEI CTNAG 4 cut(s) 278, 620, 846, 1025
BstDSI CCRYGG 2 cut(s) 12, 960
BstENI CCTNNNNNAGG 1 cut(s) 351
BstF5I GGATG 6 cut(s) 176, 180, 400, 460, 1267, 1446
BstH2I RGCGCY 1 cut(s) 736
BstHHI GCGC 1 cut(s) 735
BstKTI GATC 4 cut(s) 409, 417, 820, 1091
BstMAI GTCTC 1 cut(s) 1015
BstMBI GATC 4 cut(s) 406, 414, 817, 1088
BstMWI GCNNNNNNNGC 5 cut(s) 17, 482, 977, 1246, 1255
BstNI CCWGG 4 cut(s) 321, 564, 1002, 1284
BstNSI RCATGY 3 cut(s) 998, 1040, 1201
BstSCI CCNGG 4 cut(s) 319, 562, 1000, 1282
BstSFI CTRYAG 2 cut(s) 736, 919
BstSLI GKGCMC 2 cut(s) 832, 936
BstV1I GCAGC 1 cut(s) 1242
BstX2I RGATCY 1 cut(s) 1088
BstXI CCANNNNNNTGG 1 cut(s) 517
BstYI RGATCY 1 cut(s) 1088
BsuI GTATCC 1 cut(s) 754
BsuRI GGCC 4 cut(s) 11, 884, 1121, 1167
BtgI CCRYGG 2 cut(s) 12, 960
BtgZI GCGATG 1 cut(s) 1389
BtsCI GGATG 6 cut(s) 176, 180, 400, 460, 1267, 1446
BtsIMutI CAGTG 3 cut(s) 517, 598, 1448
Cac8I GCNNGC 3 cut(s) 9, 675, 969
CaiI CAGNNNCTG 2 cut(s) 301, 1046
CciI TCATGA 1 cut(s) 628
CfoI GCGC 1 cut(s) 735
Cfr13I GGNCC 4 cut(s) 9, 493, 560, 1165
CseI GACGC 2 cut(s) 557, 786
Csp6I GTAC 3 cut(s) 174, 1210, 1296
CviQI GTAC 3 cut(s) 174, 1210, 1296
DdeI CTNAG 4 cut(s) 278, 620, 846, 1025
DpnI GATC 4 cut(s) 408, 416, 819, 1090
DpnII GATC 4 cut(s) 406, 414, 817, 1088
DraIII CACNNNGTG 1 cut(s) 1246
DrdI GACNNNNNNGTC 1 cut(s) 567
DseDI GACNNNNNNGTC 1 cut(s) 567
Eam1104I CTCTTC 1 cut(s) 1145
EarI CTCTTC 1 cut(s) 1145
Eco130I CCWWGG 5 cut(s) 12, 347, 385, 960, 1436
Eco147I AGGCCT 2 cut(s) 884, 1121
Eco47I GGWCC 2 cut(s) 493, 560
Eco57I CTGAAG 3 cut(s) 309, 702, 1002
Eco88I CYCGRG 2 cut(s) 423, 498
EcoNI CCTNNNNNAGG 1 cut(s) 351
EcoO109I RGGNCCY 1 cut(s) 493
EcoRII CCWGG 4 cut(s) 319, 562, 1000, 1282
EcoT14I CCWWGG 5 cut(s) 12, 347, 385, 960, 1436
ErhI CCWWGG 5 cut(s) 12, 347, 385, 960, 1436
FalI AAGNNNNNCTT 2 cut(s) 540, 572
FaqI GGGAC 1 cut(s) 479
FbaI TGATCA 1 cut(s) 817
Fnu4HI GCNGC 2 cut(s) 18, 1256
FokI GGATG 6 cut(s) 167, 183, 407, 447, 1254, 1453
Fsp4HI GCNGC 2 cut(s) 18, 1256
FspBI CTAG 3 cut(s) 29, 1385, 1413
GlaI GCGC 1 cut(s) 734
GluI GCNGC 2 cut(s) 18, 1256
GsuI CTGGAG 1 cut(s) 287
HaeII RGCGCY 1 cut(s) 736
HaeIII GGCC 4 cut(s) 11, 884, 1121, 1167
HgaI GACGC 2 cut(s) 557, 786
HhaI GCGC 1 cut(s) 735
Hin1I GRCGYC 1 cut(s) 568
Hin6I GCGC 1 cut(s) 733
HinP1I GCGC 1 cut(s) 733
HindIII AAGCTT 3 cut(s) 72, 686, 822
HinfI GANTC 2 cut(s) 160, 421
HphI GGTGA 2 cut(s) 83, 1472
Hpy166II GTNNAC 2 cut(s) 830, 1310
Hpy188I TCNGA 2 cut(s) 847, 1093
Hpy188III TCNNGA 7 cut(s) 108, 266, 418, 464, 629, 668, 1082
Hpy8I GTNNAC 2 cut(s) 830, 1310
HpyAV CCTTC 3 cut(s) 723, 852, 1009
HpyCH4III ACNGT 7 cut(s) 103, 116, 140, 1048, 1174, 1214, 1431
HpyCH4V TGCA 7 cut(s) 476, 605, 786, 830, 955, 1040, 1258
HpyF10VI GCNNNNNNNGC 5 cut(s) 17, 482, 977, 1246, 1255
HpyF3I CTNAG 4 cut(s) 278, 620, 846, 1025
Hsp92I GRCGYC 1 cut(s) 568
HspAI GCGC 1 cut(s) 733
Ksp22I TGATCA 1 cut(s) 817
Kzo9I GATC 4 cut(s) 406, 414, 817, 1088
LmnI GCTCC 5 cut(s) 670, 964, 1003, 1345, 1396
Lsp1109I GCAGC 1 cut(s) 1242
LweI GCATC 1 cut(s) 512
MaeI CTAG 3 cut(s) 29, 1385, 1413
MalI GATC 4 cut(s) 408, 416, 819, 1090
MboI GATC 4 cut(s) 406, 414, 817, 1088
MboII GAAGA 8 cut(s) 77, 80, 169, 302, 956, 995, 998, 1162
MflI RGATCY 1 cut(s) 1088
MhlI GDGCHC 2 cut(s) 832, 936
MluCI AATT 9 cut(s) 374, 378, 439, 745, 1094, 1156, 1332, 1363, 1481
MlyI GAGTC 1 cut(s) 415
MmeI TCCRAC 2 cut(s) 225, 317
MroXI GAANNNNTTC 2 cut(s) 214, 315
MslI CAYNNNNRTG 4 cut(s) 57, 465, 1060, 1277
MspCI CTTAAG 1 cut(s) 689
MspR9I CCNGG 4 cut(s) 321, 564, 1002, 1284
MvaI CCWGG 4 cut(s) 321, 564, 1002, 1284
MwoI GCNNNNNNNGC 5 cut(s) 17, 482, 977, 1246, 1255
NcoI CCATGG 2 cut(s) 12, 960
NdeII GATC 4 cut(s) 406, 414, 817, 1088
NlaIV GGNNCC 5 cut(s) 495, 672, 696, 1166, 1179
NspI RCATGY 3 cut(s) 998, 1040, 1201
PaeR7I CTCGAG 1 cut(s) 423
PagI TCATGA 1 cut(s) 628
PceI AGGCCT 2 cut(s) 884, 1121
PdmI GAANNNNTTC 2 cut(s) 214, 315
PfeI GAWTC 1 cut(s) 160
PflMI CCANNNNNTGG 1 cut(s) 1174
PkrI GCNGC 2 cut(s) 19, 1257
PleI GAGTC 1 cut(s) 415
PpsI GAGTC 1 cut(s) 415
PpuMI RGGWCCY 1 cut(s) 493
PshBI ATTAAT 1 cut(s) 377
Psp5II RGGWCCY 1 cut(s) 493
Psp6I CCWGG 4 cut(s) 319, 562, 1000, 1282
PspGI CCWGG 4 cut(s) 319, 562, 1000, 1282
PspN4I GGNNCC 5 cut(s) 495, 672, 696, 1166, 1179
PspPI GGNCC 4 cut(s) 9, 493, 560, 1165
PspPPI RGGWCCY 1 cut(s) 493
PspXI VCTCGAGB 1 cut(s) 423
PstNI CAGNNNCTG 2 cut(s) 301, 1046
PsuI RGATCY 1 cut(s) 1088
RsaI GTAC 3 cut(s) 175, 1211, 1297
RsaNI GTAC 3 cut(s) 174, 1210, 1296
RseI CAYNNNNRTG 4 cut(s) 57, 465, 1060, 1277
SatI GCNGC 2 cut(s) 18, 1256
Sau3AI GATC 4 cut(s) 406, 414, 817, 1088
Sau96I GGNCC 4 cut(s) 9, 493, 560, 1165
SchI GAGTC 1 cut(s) 415
ScrFI CCNGG 4 cut(s) 321, 564, 1002, 1284
SduI GDGCHC 2 cut(s) 832, 936
SfaNI GCATC 1 cut(s) 512
SfcI CTRYAG 2 cut(s) 736, 919
Sfr274I CTCGAG 1 cut(s) 423
SinI GGWCC 2 cut(s) 493, 560
SlaI CTCGAG 1 cut(s) 423
SmiMI CAYNNNNRTG 4 cut(s) 57, 465, 1060, 1277
SmlI CTYRAG 2 cut(s) 423, 689
SmoI CTYRAG 2 cut(s) 423, 689
Sse9I AATT 9 cut(s) 374, 378, 439, 745, 1094, 1156, 1332, 1363, 1481
SseBI AGGCCT 2 cut(s) 884, 1121
SsiI CCGC 4 cut(s) 7, 17, 134, 232
SspMI CTAG 3 cut(s) 29, 1385, 1413
StuI AGGCCT 2 cut(s) 884, 1121
StyD4I CCNGG 4 cut(s) 319, 562, 1000, 1282
StyI CCWWGG 5 cut(s) 12, 347, 385, 960, 1436
TaaI ACNGT 7 cut(s) 103, 116, 140, 1048, 1174, 1214, 1431
TaqI TCGA 5 cut(s) 78, 155, 424, 574, 1476
TasI AATT 9 cut(s) 374, 378, 439, 745, 1094, 1156, 1332, 1363, 1481
TatI WGTACW 2 cut(s) 173, 1209
TauI GCSGC 1 cut(s) 20
TfiI GAWTC 1 cut(s) 160
TscAI CASTG 3 cut(s) 517, 598, 1455
TseI GCWGC 1 cut(s) 1255
TspDTI ATGAA 8 cut(s) 17, 41, 132, 411, 617, 723, 1050, 1278
TspGWI ACGGA 1 cut(s) 1101
TspRI CASTG 3 cut(s) 517, 598, 1455
Van91I CCANNNNNTGG 1 cut(s) 1174
Vha464I CTTAAG 1 cut(s) 689
VneI GTGCAC 1 cut(s) 828
VpaK11BI GGWCC 2 cut(s) 493, 560
VspI ATTAAT 1 cut(s) 377
XagI CCTNNNNNAGG 1 cut(s) 351
XapI RAATTY 3 cut(s) 439, 745, 1094
XceI RCATGY 3 cut(s) 998, 1040, 1201
XhoI CTCGAG 1 cut(s) 423
XmnI GAANNNNTTC 2 cut(s) 214, 315
XspI CTAG 3 cut(s) 29, 1385, 1413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.