Rorug01G0360200

Belongs to the histidine acid phosphatase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0005275
Physical Location & Seq
Forward (+)
47581553 .. 47587885
6333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0360200.1

Sequence Viewer

Length: 3039 bp
ATGAGGTGGTTTAGAGCAGGGTCTAGTGTGGCAAAGTTTGCCATTAGGAGATCACTATCGAATAGGCATGTAGTTCCTTTGCAAAATCGATACTTGCAAACCACAATGTGCATGTTTTCCAAGGCAGGGGCTGCCCCGGTTCCTCGGCCGGTGCCGCTTTCGAAGCTGACTGATAGTTTCTTGGATGGAAGCAATAGTGTTTATTTAGAGGGGCTTCAGAGGGCCTGGGAGGCTGATCCCAGCAGTGTTGATGAATCCTGGGATAATTTCTTTAGGAATTTTGTGGGGCAGGCCTCTACCTCCCCTGGAGTTTCGGGGCAGACCATTCAAGAGAGTATGCGTTTGTTGTTGCTTGTGAGGGCTTATCAGGTTAGTGGTCATATGAAAGCTAAATTGGACCCTTTGGCATTGCAGGAGAGGAAAGTCCCAGATGAGTTGGACCCTGCTTCATATGGGTTTACTGAGGCTGATCTTGATAGGGAGTTCTTTTTAGGGGTTTGGAGGATAGCTGGGTTTCTGGCTGAGAATCGTCCGGTGCAGACCCTTAGGTCCATATTGACCCGGCTAGAGCAGGCTTACTGTGGGAGCATTGGGTATGAGTATATGCACATTGCGGATCGTAACAAATGTAACTGGTTGAGAGAAAAGATTGAGACTCCAACAATGATGCAATACAATGGGCAGCGCCGTGAGGTTTTTCTTGACAGGCTTATTTGGAGTACACAGTTTGAGAACTTCTTGCACTCTAAGTGGAAGACAGCAAAGAGGTTTGGGCTTGAAGGTTGCGAAACTCTCATTCCTGGCATGAAGGAGATGTTTGATAGGGCAGCAGATCTTGGGGTTGAGAGCATAGTCATTGGAATGCCTCATAGAGGAAGACTGAATGTATTGGGTAATGTGGTCCGAAAACCTTTGCGGCAGATATTCAGTGAATTCAGTGGTGGTACAAAGCCTGTGGATGAAGATGGGCTGTACTCAGGGACTGGTGATGTCAAGTATCACTTGGGAACTTCCTATGATCGACCCACTAGAGGTGGGAAAAGACTTCATCTATCTTTGGTTGCAAATCCAAGTCACTTGGAAGCTGTGGATCCAGTTGTTGTTGGAAAAACAAGAGCAAAGCAATTTTATTCAAATGATTTGGACAGGACCAAGAATATGGCAGTTTTGATTCATGGAGATGGTAGCTTTGCCGGACAAGGAGTGGTCTACGAGACTCTGCATCTTAGTGCTCTTCCTAATTACACCACTGGTGGGACTATACACATTGTAGTGAATAACCAAGTTGCCTTCACAACTGATCCAATGTCCGGCAGATCTTCAGAGTATTGCACTGATGTTGCTAAAGCCTTGAATGTCCCTATTTTCCATGTAAATGCTGATGACATGGAGGCAGTAGTTCATGTCTGTGAGCTTGCAGCTGAGTGGCGCCAGACATTCCATTCTGATGTTGTAGTTGATTTAGTGTGTTATCGTCGATTTGGGCATAATGAGTTAGATGAGCCATCATTTACGCAGCCTAAAATGTACCAGGTTATTAAAAATCATCCGAACCCTCTAACTATTTACATGAACAAACTTTTAGAATCTGGACAAGTGAACCAAGAAGATATTGAGAGGATACAGAGCAAGGTTAATAAGATTCTAAACGAAGAGTTCTTAGCTAGCAAAGATTATGTTCCTCAAAGAAGGGATTGGCTTGCATCTCATTGGACTGGATTCAAGTCACCTGAACAACTTTCTCGTATCCGAAACACTGGGGTAAAACCAGAGATTTTGAAGGATGTTGGCAAAGCAATTACATTTTTACCAGAAAATTTTAAACCTCATAGAGCAGTAAAGAAGGTATATGGAGAACGTGCAGAAATGATTGAGACTGGTGAAGGTATTGATTGGGCAGTTGCAGAAGCACTTGCCTTTGCTACACTGCTTGTTGAAGGTAACCATGTTCGACTGAGTGGTCAGGATGTTGAGAGAGGTACATTTAGTCATCGGCATTCTGTACTTCATGACCAGGAAACAGGGGAAAAGTATTGCCCTCTGGACCATGTTATGGCGAACCAAGATGAGGAATTGTTTACAGTTAGCAACAGCTCACTTTCGGAGTTCGGTGTTCTTGGATTTGAATTGGGTTACTCGATGGAGAATCCAAATGCGTTGGTACTTTGGGAAGCTCAATTTGGTGATTTTGCCAATGGAGCTCAAGTTATATTTGATCAGTTTTTGAGTAGTGGGGAGTCAAAGTGGCTTCGTCAAACTGGGCTTGTTGTACTGCTTCCACACAGTTATGCTGGTCAGGGACCTGAACATTCAAGTGCCCGATTGGAGCGATTTCTTCAGATGAGTGATGACAATCCTTACCTCATACCTGAGATGGATCATACACATCGGAAGCAAATTCAGGAATGTAATTGGCAGGTTGTGAATGTGACAACTCCTGCTAATTATTTCCATGTCCTGCGTCGTCAGATAAACAGGGAGTTCCGCAAGCCTCTTGTTGTGATGGCTCCTAAAAACTTGCTTCGTCACAAAGACTGCAAATCAAATTTATCTGAGTTTGATGATGTTGAAGGCCATCCAGGTTTTGACAAGCAGGGGACCAGATTTAAGCGCCTTATAAAGGACCAGAATGATCACTCTGATCTGGAGGAGGGTATTAGACGGCTTGTTCTTTGCTCCGGAAAGATTTACTATGAGCTTGATGAAGAGCGAAGACAGACTAATGTGAAGGATATTGCAATATGTAGAGTGGAACAGCTTTGCCCCTTGCCATATAACCTCATTCAGCGAGAACTGAAGCGATATCCTAATGCTGAGATAGTTTGGTGCCAGGAAGAGCCGATGAACATGGGTGCGTACAGCTACATCGCACCTCGACTATGCACTGCCATGAAGTCAGTGAGCAGAGGAACTGCTGATGATATCAAATATGTTGGTCGTCCTTCATCTGCTTCCACAGCAACTGGTTTCTATGACGTTCATCTCAAGGAACAGTCTGAGCTTGTGCACAAAGCGCTGCAGCCTGAGCCAATCGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko00562 ko01100 map00010 map00562 map01100
Pfam Domains
Protein Families
His_Phos_2

Protein Analysis

1012

Amino Acids

114.97

Weight (kDa)

6.34

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2-oxogl_dehyd_N PF16078 58 - 95 1.4e-14 2-oxoglutarate dehydrogenase N-terminus
E1_dh PF00676 239 - 559 1.1e-61 Dehydrogenase E1 component
Transket_pyr PF02779 629 - 842 2e-48 Transketolase, pyrimidine binding domain
OxoGdeHyase_C PF16870 865 - 1006 3.8e-50 2-oxoglutarate dehydrogenase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2618
AasI GACNNNNNNGTC 2 cut(s) 547, 1959
Acc36I ACCTGC 1 cut(s) 2407
AccB1I GGYRCC 3 cut(s) 151, 1428, 2826
AccB7I CCANNNNNTGG 1 cut(s) 2053
AccI GTMKAC 1 cut(s) 1209
AccIII TCCGGA 1 cut(s) 2678
AciI CCGC 4 cut(s) 155, 614, 916, 2485
AclWI GGATC 6 cut(s) 230, 624, 1085, 1098, 1295, 2385
AcoI YGGCCR 1 cut(s) 146
AcsI RAATTY 5 cut(s) 277, 932, 1816, 2397, 2545
AcuI CTGAAG 4 cut(s) 200, 1305, 2321, 2816
AcyI GRCGYC 1 cut(s) 1429
AdeI CACNNNGTG 1 cut(s) 108
AfaI GTAC 9 cut(s) 721, 946, 974, 1529, 1981, 2004, 2163, 2271, 2858
AfeI AGCGCT 1 cut(s) 3015
AfiI CCNNNNNNNGG 8 cut(s) 126, 872, 1031, 1254, 1310, 2053, 2068, 2620
AjnI CCWGG 8 cut(s) 224, 257, 304, 799, 1530, 2013, 2578, 2829
AjuI GAANNNNNNNTTGG 4 cut(s) 377, 409, 2163, 2195
Alw21I GWGCWC 3 cut(s) 1234, 2203, 3009
Alw26I GTCTC 3 cut(s) 647, 1208, 1868
Alw44I GTGCAC 1 cut(s) 3005
AlwI GGATC 6 cut(s) 230, 624, 1085, 1098, 1295, 2385
AlwNI CAGNNNCTG 3 cut(s) 131, 983, 2963
Aor13HI TCCGGA 1 cut(s) 2678
Aor51HI AGCGCT 1 cut(s) 3015
AoxI GGCC 4 cut(s) 146, 222, 291, 2572
ApaLI GTGCAC 1 cut(s) 3005
ApeKI GCWGC 7 cut(s) 131, 682, 827, 1418, 1516, 3016, 3019
ApoI RAATTY 5 cut(s) 277, 932, 1816, 2397, 2545
AspLEI GCGC 4 cut(s) 687, 1431, 2613, 3016
AsuC2I CCSGG 2 cut(s) 137, 562
AsuHPI GGTGA 4 cut(s) 998, 1719, 1892, 2195
AsuII TTCGAA 1 cut(s) 161
AsuNHI GCTAGC 1 cut(s) 1664
AvaII GGWCC 9 cut(s) 397, 439, 549, 901, 1149, 2044, 2300, 2598, 2623
AxyI CCTNAGG 1 cut(s) 545
BaeGI GKGCMC 2 cut(s) 2320, 3009
BamHI GGATCC 1 cut(s) 1090
BanI GGYRCC 3 cut(s) 151, 1428, 2826
BanII GRGCYC 1 cut(s) 2203
BbsI GAAGAC 3 cut(s) 761, 883, 2719
Bbv12I GWGCWC 3 cut(s) 1234, 2203, 3009
BbvI GCAGC 7 cut(s) 118, 694, 839, 1430, 1528, 3003, 3031
BccI CCATC 8 cut(s) 179, 959, 1175, 1513, 2134, 2368, 2497, 2583
BceAI ACGGC 2 cut(s) 672, 2678
BciT130I CCWGG 8 cut(s) 226, 259, 306, 801, 1532, 2015, 2580, 2831
BciVI GTATCC 2 cut(s) 1614, 1757
BclI TGATCA 2 cut(s) 2215, 2632
BcnI CCSGG 2 cut(s) 137, 562
BcoDI GTCTC 3 cut(s) 647, 1208, 1868
BfaI CTAG 4 cut(s) 24, 566, 1029, 1665
BfmI CTRYAG 1 cut(s) 3017
BfoI RGCGCY 4 cut(s) 688, 1432, 2614, 3017
BfuAI ACCTGC 1 cut(s) 2407
BfuI GTATCC 2 cut(s) 1614, 1757
BglI GCCNNNNNGGC 1 cut(s) 230
BglII AGATCT 2 cut(s) 832, 1316
BisI GCNGC 9 cut(s) 132, 155, 683, 828, 917, 1419, 1517, 3017, 3020
BlsI GCNGC 9 cut(s) 133, 156, 684, 829, 918, 1420, 1518, 3018, 3021
Bme18I GGWCC 9 cut(s) 397, 439, 549, 901, 1149, 2044, 2300, 2598, 2623
BmrI ACTGGG 2 cut(s) 1767, 2268
BmsI GCATC 3 cut(s) 657, 1231, 1712
BmtI GCTAGC 1 cut(s) 1668
BmuI ACTGGG 2 cut(s) 1767, 2268
BpiI GAAGAC 3 cut(s) 761, 883, 2719
BpmI CTGGAG 2 cut(s) 327, 2666
Bpu10I CCTNAGC 1 cut(s) 3024
Bpu14I TTCGAA 1 cut(s) 161
BpuEI CTTGAG 2 cut(s) 2187, 2969
BpuMI CCSGG 2 cut(s) 137, 562
Bsa29I ATCGAT 2 cut(s) 88, 3033
BsaBI GATNNNNATC 2 cut(s) 55, 2352
BsaHI GRCGYC 1 cut(s) 1429
BsaJI CCNNGG 6 cut(s) 120, 135, 143, 225, 258, 304
BsaWI WCCGGW 2 cut(s) 532, 2678
BsaXI ACNNNNNCTCC 4 cut(s) 2190, 2220, 2228, 2258
Bsc4I CCNNNNNNNGG 8 cut(s) 126, 872, 1031, 1254, 1310, 2053, 2068, 2620
Bse118I RCCGGY 1 cut(s) 148
Bse1I ACTGG 9 cut(s) 638, 988, 1094, 1255, 1720, 1762, 1882, 2263, 2968
Bse21I CCTNAGG 1 cut(s) 545
Bse3DI GCAATG 2 cut(s) 407, 609
Bse8I GATNNNNATC 2 cut(s) 55, 2352
BseAI TCCGGA 1 cut(s) 2678
BseBI CCWGG 8 cut(s) 226, 259, 306, 801, 1532, 2015, 2580, 2831
BseCI ATCGAT 2 cut(s) 88, 3033
BseDI CCNNGG 6 cut(s) 120, 135, 143, 225, 258, 304
BseGI GGATG 6 cut(s) 190, 964, 1546, 1789, 1972, 2575
BseJI GATNNNNATC 2 cut(s) 55, 2352
BseLI CCNNNNNNNGG 8 cut(s) 126, 872, 1031, 1254, 1310, 2053, 2068, 2620
BseMI GCAATG 2 cut(s) 407, 609
BseNI ACTGG 9 cut(s) 638, 988, 1094, 1255, 1720, 1762, 1882, 2263, 2968
BseRI GAGGAG 1 cut(s) 2663
BseSI GKGCMC 2 cut(s) 2320, 3009
BseX3I CGGCCG 1 cut(s) 146
BseXI GCAGC 7 cut(s) 118, 694, 839, 1430, 1528, 3003, 3031
BseYI CCCAGC 2 cut(s) 239, 509
BsgI GTGCAG 2 cut(s) 557, 1881
Bsh1285I CGRYCG 1 cut(s) 149
BshFI GGCC 4 cut(s) 148, 224, 293, 2574
BshNI GGYRCC 3 cut(s) 151, 1428, 2826
BshVI ATCGAT 2 cut(s) 88, 3033
BsiEI CGRYCG 1 cut(s) 149
BsiHKAI GWGCWC 3 cut(s) 1234, 2203, 3009
BsiSI CCGG 7 cut(s) 137, 149, 533, 562, 1194, 1311, 2679
BslFI GGGAC 6 cut(s) 410, 994, 1270, 1343, 2313, 2611
BslI CCNNNNNNNGG 8 cut(s) 126, 872, 1031, 1254, 1310, 2053, 2068, 2620
BsmAI GTCTC 3 cut(s) 647, 1208, 1868
BsmFI GGGAC 6 cut(s) 410, 994, 1270, 1343, 2313, 2611
BsmI GAATGC 2 cut(s) 867, 1996
BsnI GGCC 4 cut(s) 148, 224, 293, 2574
Bsp119I TTCGAA 1 cut(s) 161
Bsp1286I GDGCHC 4 cut(s) 1234, 2203, 2320, 3009
Bsp13I TCCGGA 1 cut(s) 2678
BspACI CCGC 4 cut(s) 155, 614, 916, 2485
BspANI GGCC 4 cut(s) 148, 224, 293, 2574
BspDI ATCGAT 2 cut(s) 88, 3033
BspEI TCCGGA 1 cut(s) 2678
BspHI TCATGA 1 cut(s) 2008
BspMAI CTGCAG 1 cut(s) 3021
BspMI ACCTGC 1 cut(s) 2407
BspOI GCTAGC 1 cut(s) 1668
BspPI GGATC 6 cut(s) 230, 624, 1085, 1098, 1295, 2385
BspQI GCTCTTC 3 cut(s) 1239, 2700, 2829
BspT104I TTCGAA 1 cut(s) 161
BspT107I GGYRCC 3 cut(s) 151, 1428, 2826
BsrDI GCAATG 2 cut(s) 407, 609
BsrFI RCCGGY 1 cut(s) 148
BsrI ACTGG 9 cut(s) 638, 988, 1094, 1255, 1720, 1762, 1882, 2263, 2968
BssAI RCCGGY 1 cut(s) 148
BssECI CCNNGG 6 cut(s) 120, 135, 143, 225, 258, 304
BssNI GRCGYC 1 cut(s) 1429
BssT1I CCWWGG 1 cut(s) 120
Bst2UI CCWGG 8 cut(s) 226, 259, 306, 801, 1532, 2015, 2580, 2831
Bst4CI ACNGT 5 cut(s) 581, 726, 2083, 2285, 2994
Bst6I CTCTTC 4 cut(s) 1239, 1647, 2700, 2829
BstACI GRCGYC 1 cut(s) 1429
BstAPI GCANNNNNTGC 2 cut(s) 38, 131
BstBI TTCGAA 1 cut(s) 161
BstC8I GCNNGC 6 cut(s) 291, 573, 1416, 1666, 1701, 2489
BstEII GGTNACC 1 cut(s) 1940
BstENI CCTNNNNNAGG 2 cut(s) 870, 2618
BstF5I GGATG 6 cut(s) 190, 964, 1546, 1789, 1972, 2575
BstH2I RGCGCY 4 cut(s) 688, 1432, 2614, 3017
BstHHI GCGC 4 cut(s) 687, 1431, 2613, 3016
BstMAI GTCTC 3 cut(s) 647, 1208, 1868
BstMCI CGRYCG 1 cut(s) 149
BstMWI GCNNNNNNNGC 9 cut(s) 38, 131, 154, 163, 230, 2198, 2957, 3013, 3025
BstNI CCWGG 8 cut(s) 226, 259, 306, 801, 1532, 2015, 2580, 2831
BstNSI RCATGY 2 cut(s) 71, 115
BstPI GGTNACC 1 cut(s) 1940
BstSFI CTRYAG 1 cut(s) 3017
BstSLI GKGCMC 2 cut(s) 2320, 3009
BstV1I GCAGC 7 cut(s) 118, 694, 839, 1430, 1528, 3003, 3031
BstV2I GAAGAC 3 cut(s) 761, 883, 2719
BstX2I RGATCY 3 cut(s) 832, 1090, 1316
BstXI CCANNNNNNTGG 1 cut(s) 1159
BstYI RGATCY 3 cut(s) 832, 1090, 1316
BstZI CGGCCG 1 cut(s) 146
Bsu15I ATCGAT 2 cut(s) 88, 3033
Bsu36I CCTNAGG 1 cut(s) 545
BsuI GTATCC 2 cut(s) 1614, 1757
BsuRI GGCC 4 cut(s) 148, 224, 293, 2574
BsuTUI ATCGAT 2 cut(s) 88, 3033
BtgZI GCGATG 1 cut(s) 2851
BtsCI GGATG 6 cut(s) 190, 964, 1546, 1789, 1972, 2575
BtsI GCAGTG 3 cut(s) 250, 1925, 2883
BtsIMutI CAGTG 9 cut(s) 250, 934, 943, 1248, 1332, 1755, 1925, 2883, 2904
BveI ACCTGC 1 cut(s) 2407
Cac8I GCNNGC 6 cut(s) 291, 573, 1416, 1666, 1701, 2489
CaiI CAGNNNCTG 3 cut(s) 131, 983, 2963
CciI TCATGA 1 cut(s) 2008
CfoI GCGC 4 cut(s) 687, 1431, 2613, 3016
Cfr10I RCCGGY 1 cut(s) 148
ClaI ATCGAT 2 cut(s) 88, 3033
CseI GACGC 1 cut(s) 2450
CsiI ACCWGGT 1 cut(s) 1530
Csp6I GTAC 9 cut(s) 720, 945, 973, 1528, 1980, 2003, 2162, 2270, 2857
CspCI CAANNNNNGTGG 2 cut(s) 936, 971
CviQI GTAC 9 cut(s) 720, 945, 973, 1528, 1980, 2003, 2162, 2270, 2857
DinI GGCGCC 1 cut(s) 1430
DraI TTTAAA 1 cut(s) 1822
DraIII CACNNNGTG 1 cut(s) 108
DrdI GACNNNNNNGTC 2 cut(s) 547, 1959
DseDI GACNNNNNNGTC 2 cut(s) 547, 1959
EaeI YGGCCR 1 cut(s) 146
EagI CGGCCG 1 cut(s) 146
Eam1104I CTCTTC 4 cut(s) 1239, 1647, 2700, 2829
EarI CTCTTC 4 cut(s) 1239, 1647, 2700, 2829
Ecl136II GAGCTC 1 cut(s) 2201
EclXI CGGCCG 1 cut(s) 146
Eco130I CCWWGG 1 cut(s) 120
Eco147I AGGCCT 1 cut(s) 293
Eco24I GRGCYC 1 cut(s) 2203
Eco32I GATATC 2 cut(s) 2804, 2923
Eco47I GGWCC 9 cut(s) 397, 439, 549, 901, 1149, 2044, 2300, 2598, 2623
Eco47III AGCGCT 1 cut(s) 3015
Eco52I CGGCCG 1 cut(s) 146
Eco53kI GAGCTC 1 cut(s) 2201
Eco57I CTGAAG 4 cut(s) 200, 1305, 2321, 2816
Eco81I CCTNAGG 1 cut(s) 545
Eco91I GGTNACC 1 cut(s) 1940
EcoICRI GAGCTC 1 cut(s) 2201
EcoNI CCTNNNNNAGG 2 cut(s) 870, 2618
EcoO109I RGGNCCY 2 cut(s) 222, 2300
EcoO65I GGTNACC 1 cut(s) 1940
EcoRI GAATTC 1 cut(s) 932
EcoRII CCWGG 8 cut(s) 224, 257, 304, 799, 1530, 2013, 2578, 2829
EcoRV GATATC 2 cut(s) 2804, 2923
EcoT14I CCWWGG 1 cut(s) 120
EcoT38I GRGCYC 1 cut(s) 2203
EgeI GGCGCC 1 cut(s) 1430
EheI GGCGCC 1 cut(s) 1430
ErhI CCWWGG 1 cut(s) 120
FalI AAGNNNNNCTT 2 cut(s) 986, 1018
FaqI GGGAC 6 cut(s) 410, 994, 1270, 1343, 2313, 2611
FauNDI CATATG 2 cut(s) 381, 451
FbaI TGATCA 2 cut(s) 2215, 2632
FblI GTMKAC 1 cut(s) 1209
Fnu4HI GCNGC 9 cut(s) 132, 155, 683, 828, 917, 1419, 1517, 3017, 3020
FokI GGATG 6 cut(s) 197, 971, 1533, 1796, 1979, 2562
FriOI GRGCYC 1 cut(s) 2203
Fsp4HI GCNGC 9 cut(s) 132, 155, 683, 828, 917, 1419, 1517, 3017, 3020
FspBI CTAG 4 cut(s) 24, 566, 1029, 1665
GlaI GCGC 4 cut(s) 686, 1430, 2612, 3015
GluI GCNGC 9 cut(s) 132, 155, 683, 828, 917, 1419, 1517, 3017, 3020
GsaI CCCAGC 2 cut(s) 243, 513
GsuI CTGGAG 2 cut(s) 327, 2666
HaeII RGCGCY 4 cut(s) 688, 1432, 2614, 3017
HaeIII GGCC 4 cut(s) 148, 224, 293, 2574
HapII CCGG 7 cut(s) 137, 149, 533, 562, 1194, 1311, 2679
HgaI GACGC 1 cut(s) 2450
HhaI GCGC 4 cut(s) 687, 1431, 2613, 3016
Hin1I GRCGYC 1 cut(s) 1429
Hin6I GCGC 4 cut(s) 685, 1429, 2611, 3014
HinP1I GCGC 4 cut(s) 685, 1429, 2611, 3014
HpaII CCGG 7 cut(s) 137, 149, 533, 562, 1194, 1311, 2679
HphI GGTGA 4 cut(s) 998, 1719, 1892, 2195
Hpy166II GTNNAC 6 cut(s) 459, 722, 1210, 1600, 2079, 3007
Hpy8I GTNNAC 6 cut(s) 459, 722, 1210, 1600, 2079, 3007
Hpy99I CGWCG 2 cut(s) 1479, 2466
HpyCH4III ACNGT 5 cut(s) 581, 726, 2083, 2285, 2994
HpyCH4IV ACGT 2 cut(s) 1858, 2976
HpyF10VI GCNNNNNNNGC 9 cut(s) 38, 131, 154, 163, 230, 2198, 2957, 3013, 3025
HpySE526I ACGT 2 cut(s) 1858, 2976
Hsp92I GRCGYC 1 cut(s) 1429
HspAI GCGC 4 cut(s) 685, 1429, 2611, 3014
KasI GGCGCC 1 cut(s) 1428
Kpn2I TCCGGA 1 cut(s) 2678
Ksp22I TGATCA 2 cut(s) 2215, 2632
LguI GCTCTTC 3 cut(s) 1239, 2700, 2829
LmnI GCTCC 5 cut(s) 585, 2198, 2326, 2512, 2681
Lsp1109I GCAGC 7 cut(s) 118, 694, 839, 1430, 1528, 3003, 3031
LweI GCATC 3 cut(s) 657, 1231, 1712
MabI ACCWGGT 1 cut(s) 1530
MaeI CTAG 4 cut(s) 24, 566, 1029, 1665
MaeII ACGT 2 cut(s) 1858, 2976
MaeIII GTNAC 8 cut(s) 620, 629, 1073, 1725, 1940, 2132, 2428, 2525
MflI RGATCY 3 cut(s) 832, 1090, 1316
MhlI GDGCHC 4 cut(s) 1234, 2203, 2320, 3009
Mly113I GGCGCC 1 cut(s) 1429
MlyI GAGTC 3 cut(s) 649, 1210, 2246
MmeI TCCRAC 3 cut(s) 417, 683, 1084
MroI TCCGGA 1 cut(s) 2678
MseI TTAA 5 cut(s) 1539, 1635, 1821, 2607, 3037
MspA1I CMGCKG 1 cut(s) 1421
MspI CCGG 7 cut(s) 137, 149, 533, 562, 1194, 1311, 2679
Mva1269I GAATGC 2 cut(s) 867, 1996
MvaI CCWGG 8 cut(s) 226, 259, 306, 801, 1532, 2015, 2580, 2831
MwoI GCNNNNNNNGC 9 cut(s) 38, 131, 154, 163, 230, 2198, 2957, 3013, 3025
NarI GGCGCC 1 cut(s) 1429
NciI CCSGG 2 cut(s) 137, 562
NdeI CATATG 2 cut(s) 381, 451
NheI GCTAGC 1 cut(s) 1664
NmeAIII GCCGAG 1 cut(s) 124
NmuCI GTSAC 4 cut(s) 1073, 1725, 2428, 2525
NspI RCATGY 2 cut(s) 71, 115
NspV TTCGAA 1 cut(s) 161
PagI TCATGA 1 cut(s) 2008
PceI AGGCCT 1 cut(s) 293
PciSI GCTCTTC 3 cut(s) 1239, 2700, 2829
PctI GAATGC 2 cut(s) 867, 1996
PfeI GAWTC 7 cut(s) 254, 526, 1171, 1586, 1642, 1719, 2146
PflMI CCANNNNNTGG 1 cut(s) 2053
PkrI GCNGC 9 cut(s) 133, 156, 684, 829, 918, 1420, 1518, 3018, 3021
PleI GAGTC 3 cut(s) 649, 1210, 2245
PluTI GGCGCC 1 cut(s) 1432
PpsI GAGTC 3 cut(s) 649, 1210, 2245
PpuMI RGGWCCY 1 cut(s) 2300
PsiI TTATAA 1 cut(s) 2618
Psp124BI GAGCTC 1 cut(s) 2203
Psp5II RGGWCCY 1 cut(s) 2300
Psp6I CCWGG 8 cut(s) 224, 257, 304, 799, 1530, 2013, 2578, 2829
PspEI GGTNACC 1 cut(s) 1940
PspFI CCCAGC 2 cut(s) 239, 509
PspGI CCWGG 8 cut(s) 224, 257, 304, 799, 1530, 2013, 2578, 2829
PspPPI RGGWCCY 1 cut(s) 2300
PstI CTGCAG 1 cut(s) 3021
PstNI CAGNNNCTG 3 cut(s) 131, 983, 2963
PsuI RGATCY 3 cut(s) 832, 1090, 1316
PvuII CAGCTG 1 cut(s) 1421
RsaI GTAC 9 cut(s) 721, 946, 974, 1529, 1981, 2004, 2163, 2271, 2858
RsaNI GTAC 9 cut(s) 720, 945, 973, 1528, 1980, 2003, 2162, 2270, 2857
SacI GAGCTC 1 cut(s) 2203
SapI GCTCTTC 3 cut(s) 1239, 2700, 2829
SaqAI TTAA 5 cut(s) 1539, 1635, 1821, 2607, 3037
SatI GCNGC 9 cut(s) 132, 155, 683, 828, 917, 1419, 1517, 3017, 3020
SchI GAGTC 3 cut(s) 649, 1210, 2246
SduI GDGCHC 4 cut(s) 1234, 2203, 2320, 3009
SexAI ACCWGGT 1 cut(s) 1530
SfaNI GCATC 3 cut(s) 657, 1231, 1712
SfcI CTRYAG 1 cut(s) 3017
SfoI GGCGCC 1 cut(s) 1430
SfuI TTCGAA 1 cut(s) 161
SinI GGWCC 9 cut(s) 397, 439, 549, 901, 1149, 2044, 2300, 2598, 2623
SmlI CTYRAG 2 cut(s) 2202, 2984
SmoI CTYRAG 2 cut(s) 2202, 2984
SseBI AGGCCT 1 cut(s) 293
SsiI CCGC 4 cut(s) 155, 614, 916, 2485
SspDI GGCGCC 1 cut(s) 1428
SspMI CTAG 4 cut(s) 24, 566, 1029, 1665
SstI GAGCTC 1 cut(s) 2203
StuI AGGCCT 1 cut(s) 293
StyI CCWWGG 1 cut(s) 120
TaaI ACNGT 5 cut(s) 581, 726, 2083, 2285, 2994
TaiI ACGT 2 cut(s) 1861, 2979
TaqI TCGA 9 cut(s) 59, 88, 161, 1021, 1477, 1951, 2138, 2875, 3033
TatI WGTACW 4 cut(s) 719, 972, 2002, 2269
TauI GCSGC 2 cut(s) 157, 919
TfiI GAWTC 7 cut(s) 254, 526, 1171, 1586, 1642, 1719, 2146
Tru1I TTAA 5 cut(s) 1539, 1635, 1821, 2607, 3037
Tru9I TTAA 5 cut(s) 1539, 1635, 1821, 2607, 3037
TscAI CASTG 9 cut(s) 250, 934, 943, 1255, 1339, 1762, 1932, 2890, 2904
TseFI GTSAC 4 cut(s) 1073, 1725, 2428, 2525
TseI GCWGC 7 cut(s) 131, 682, 827, 1418, 1516, 3016, 3019
Tsp45I GTSAC 4 cut(s) 1073, 1725, 2428, 2525
TspRI CASTG 9 cut(s) 250, 934, 943, 1255, 1339, 1762, 1932, 2890, 2904
Van91I CCANNNNNTGG 1 cut(s) 2053
VneI GTGCAC 1 cut(s) 3005
VpaK11BI GGWCC 9 cut(s) 397, 439, 549, 901, 1149, 2044, 2300, 2598, 2623
XagI CCTNNNNNAGG 2 cut(s) 870, 2618
XapI RAATTY 5 cut(s) 277, 932, 1816, 2397, 2545
XceI RCATGY 2 cut(s) 71, 115
XmiI GTMKAC 1 cut(s) 1209
XspI CTAG 4 cut(s) 24, 566, 1029, 1665
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.