Prupe.2G256700_v2.0.a1

Abscisic acid receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0012881
Physical Location & Seq
Reverse (-)
26852870 .. 26853524
655 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G256700.1

Sequence Viewer

Length: 648 bp
ATGCCTTCCTCACTGCAATTCCAAAGACCCATCAATAACTCTCCTAATTTTTATCCCACAAACACATTAATCCACCACAAGCAATTCCAATCCCACGCCGCGGCCGCAGCTGTAGCGGAGGACTTCACGCGCCTCAACGCTCACGTGATGTCGCCCAACCCCAACCAGTGCTGCTCCGCGGTTGTGCAGTCCATCGAGGCCCCCGTCCCGACCGTGTGGTCGGTGGTGCGGCGCTTCGACAACCCACAGGCCTACAAGCACTTCCTCAAGAGCTGCCAGGTCATCGACGGGACCGGCGACGTGGGCACGCTCCGGAAGGTCCACGTGGTGTCGGGCCTCCCCGCGGGGTCCAGCACGGAGCGCCTCGAGATCCTCGACGACGAGCGACACGTCCTGAGCTTCAGTGTTGTGGGTGGGGACCACCGGCTCGAGAACTACCGATCCGTCACCACGCTCCACGACTCGCCGAGTGGACTCGGGACCGTCGTGGTGGAGTCGTACGTGGTGGACGTTCCGCCGGGAAACACCAAGGAGGAGACGTGCGTGTTCGTCGACACCATCGTGCGCTGCAACTTGCAGTCGCTGGCTCAGATCGCGGAGAGCATGGCCAAACCATCCACCAAGAGTAACAACAACAAGCCCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
Polyketide_cyc2

Protein Analysis

216

Amino Acids

23.48

Weight (kDa)

6.49

Isoelectric Point (pI)

54.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012881)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G05440
fragaria_vesca FvH4_7g25180
malus_domestica MD01G1158500.v1.1 MD07G1227100.v1.1
prunus_persica Prupe.2G256700_v2.0.a1
pyrus_communis pycom07g20570
rosa_chinensis RchiOBHm_Chr1g0371101
rosa_laevigata RLG00000026987
rosa_multiflora Rmu_co8363357.1_g000001 Rmu_sc0001018.1_g000033 Rmu_sc0003714.1_g000007
rosa_roxburghii Rroxscaffold_4G00286000
rosa_rugosa Rorug01G0361300
rosa_samantha Rh1AG371600 Rh1BG334900 Rh1CG348300 Rh1DG366200
rosa_wichuraiana Rw1G032680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 217
AccI GTMKAC 1 cut(s) 552
AccII CGCG 5 cut(s) 101, 130, 179, 344, 596
AccIII TCCGGA 1 cut(s) 312
AclWI GGATC 2 cut(s) 364, 435
AcoI YGGCCR 2 cut(s) 102, 606
AcuI CTGAAG 1 cut(s) 385
AcvI CACGTG 2 cut(s) 145, 325
AdeI CACNNNGTG 1 cut(s) 328
AfaI GTAC 1 cut(s) 500
AfiI CCNNNNNNNGG 2 cut(s) 100, 343
AflIII ACRYGT 1 cut(s) 388
AjiI CACGTC 3 cut(s) 301, 391, 540
AjnI CCWGG 1 cut(s) 276
AleI CACNNNNGTG 1 cut(s) 560
AloI GAACNNNNNNTCC 2 cut(s) 425, 457
AluBI AGCT 3 cut(s) 110, 273, 399
AluI AGCT 3 cut(s) 110, 273, 399
Alw26I GTCTC 1 cut(s) 530
AlwI GGATC 2 cut(s) 364, 435
AlwNI CAGNNNCTG 1 cut(s) 583
Ama87I CYCGRG 3 cut(s) 365, 428, 476
Aor13HI TCCGGA 1 cut(s) 312
AoxI GGCC 5 cut(s) 102, 198, 249, 334, 606
ApeKI GCWGC 4 cut(s) 107, 171, 273, 567
AseI ATTAAT 1 cut(s) 68
AspLEI GCGC 4 cut(s) 132, 234, 363, 567
AspS9I GGNCC 7 cut(s) 199, 291, 319, 334, 348, 418, 480
AsuC2I CCSGG 1 cut(s) 519
AsuHPI GGTGA 1 cut(s) 439
AvaI CYCGRG 3 cut(s) 365, 428, 476
AvaII GGWCC 5 cut(s) 291, 319, 348, 418, 480
BaeGI GKGCMC 1 cut(s) 308
BalI TGGCCA 1 cut(s) 608
BbrPI CACGTG 2 cut(s) 145, 325
BbvI GCAGC 4 cut(s) 119, 158, 260, 554
BccI CCATC 4 cut(s) 38, 200, 566, 622
BciT130I CCWGG 1 cut(s) 278
BcnI CCSGG 1 cut(s) 519
BcoDI GTCTC 1 cut(s) 530
BfmI CTRYAG 1 cut(s) 111
BfoI RGCGCY 2 cut(s) 235, 364
BisI GCNGC 8 cut(s) 99, 102, 105, 108, 172, 230, 274, 568
BlsI GCNGC 8 cut(s) 100, 103, 106, 109, 173, 231, 275, 569
Bme1390I CCNGG 2 cut(s) 278, 519
Bme18I GGWCC 5 cut(s) 291, 319, 348, 418, 480
BmeT110I CYCGRG 3 cut(s) 365, 428, 476
BmgBI CACGTC 3 cut(s) 301, 391, 540
BmgT120I GGNCC 7 cut(s) 199, 291, 319, 334, 348, 418, 480
BmiI GGNNCC 5 cut(s) 201, 292, 349, 419, 481
BmrFI CCNGG 2 cut(s) 278, 519
Bpu10I CCTNAGC 1 cut(s) 395
BpuEI CTTGAG 1 cut(s) 251
BpuMI CCSGG 1 cut(s) 519
BsaAI YACGTR 3 cut(s) 145, 325, 502
BsaJI CCNNGG 4 cut(s) 99, 177, 342, 528
BsaWI WCCGGW 1 cut(s) 312
BsaXI ACNNNNNCTCC 2 cut(s) 524, 554
Bsc4I CCNNNNNNNGG 2 cut(s) 100, 343
Bse118I RCCGGY 2 cut(s) 293, 423
Bse1I ACTGG 1 cut(s) 166
BseAI TCCGGA 1 cut(s) 312
BseBI CCWGG 1 cut(s) 278
BseDI CCNNGG 4 cut(s) 99, 177, 342, 528
BseGI GGATG 1 cut(s) 614
BseLI CCNNNNNNNGG 2 cut(s) 100, 343
BseMII CTCAG 2 cut(s) 386, 602
BseNI ACTGG 1 cut(s) 166
BseRI GAGGAG 1 cut(s) 548
BseSI GKGCMC 1 cut(s) 308
BseX3I CGGCCG 1 cut(s) 102
BseXI GCAGC 4 cut(s) 119, 158, 260, 554
BsgI GTGCAG 1 cut(s) 206
Bsh1236I CGCG 5 cut(s) 101, 130, 179, 344, 596
Bsh1285I CGRYCG 2 cut(s) 105, 213
BshFI GGCC 5 cut(s) 104, 200, 251, 336, 608
BsiEI CGRYCG 2 cut(s) 105, 213
BsiHKCI CYCGRG 3 cut(s) 365, 428, 476
BsiSI CCGG 4 cut(s) 294, 313, 424, 518
BsiWI CGTACG 1 cut(s) 498
BslFI GGGAC 4 cut(s) 191, 304, 431, 493
BslI CCNNNNNNNGG 2 cut(s) 100, 343
BsmAI GTCTC 1 cut(s) 530
BsmBI CGTCTC 1 cut(s) 530
BsmFI GGGAC 4 cut(s) 191, 304, 431, 493
BsnI GGCC 5 cut(s) 104, 200, 251, 336, 608
BsoBI CYCGRG 3 cut(s) 365, 428, 476
Bsp1286I GDGCHC 1 cut(s) 308
Bsp13I TCCGGA 1 cut(s) 312
Bsp143I GATC 3 cut(s) 369, 440, 591
BspANI GGCC 5 cut(s) 104, 200, 251, 336, 608
BspCNI CTCAG 2 cut(s) 387, 601
BspEI TCCGGA 1 cut(s) 312
BspFNI CGCG 5 cut(s) 101, 130, 179, 344, 596
BspHI TCATGA 1 cut(s) 644
BspLI GGNNCC 5 cut(s) 201, 292, 349, 419, 481
BspPI GGATC 2 cut(s) 364, 435
BsrFI RCCGGY 2 cut(s) 293, 423
BsrI ACTGG 1 cut(s) 166
BssAI RCCGGY 2 cut(s) 293, 423
BssECI CCNNGG 4 cut(s) 99, 177, 342, 528
BssMI GATC 3 cut(s) 369, 440, 591
BssT1I CCWWGG 1 cut(s) 528
Bst2UI CCWGG 1 cut(s) 278
Bst4CI ACNGT 2 cut(s) 214, 484
BstBAI YACGTR 3 cut(s) 145, 325, 502
BstC8I GCNNGC 2 cut(s) 308, 585
BstDEI CTNAG 2 cut(s) 395, 588
BstDSI CCRYGG 3 cut(s) 99, 177, 342
BstF5I GGATG 1 cut(s) 614
BstFNI CGCG 5 cut(s) 101, 130, 179, 344, 596
BstH2I RGCGCY 2 cut(s) 235, 364
BstHHI GCGC 4 cut(s) 132, 234, 363, 567
BstKTI GATC 3 cut(s) 372, 443, 594
BstMAI GTCTC 1 cut(s) 530
BstMBI GATC 3 cut(s) 369, 440, 591
BstMCI CGRYCG 2 cut(s) 105, 213
BstMWI GCNNNNNNNGC 6 cut(s) 104, 107, 113, 303, 360, 593
BstNI CCWGG 1 cut(s) 278
BstSCI CCNGG 2 cut(s) 276, 517
BstSFI CTRYAG 1 cut(s) 111
BstSLI GKGCMC 1 cut(s) 308
BstUI CGCG 5 cut(s) 101, 130, 179, 344, 596
BstV1I GCAGC 4 cut(s) 119, 158, 260, 554
BstX2I RGATCY 1 cut(s) 369
BstYI RGATCY 1 cut(s) 369
BstZI CGGCCG 1 cut(s) 102
BsuRI GGCC 5 cut(s) 104, 200, 251, 336, 608
BtgI CCRYGG 3 cut(s) 99, 177, 342
BtrI CACGTC 3 cut(s) 301, 391, 540
BtsCI GGATG 1 cut(s) 614
BtsI GCAGTG 1 cut(s) 11
BtsIMutI CAGTG 3 cut(s) 11, 173, 409
Cac8I GCNNGC 2 cut(s) 308, 585
CaiI CAGNNNCTG 1 cut(s) 583
CciI TCATGA 1 cut(s) 644
CciNI GCGGCCGC 1 cut(s) 102
CfoI GCGC 4 cut(s) 132, 234, 363, 567
Cfr10I RCCGGY 2 cut(s) 293, 423
Cfr13I GGNCC 7 cut(s) 199, 291, 319, 334, 348, 418, 480
Cfr42I CCGCGG 3 cut(s) 102, 180, 345
Csp6I GTAC 1 cut(s) 499
CviAII CATG 2 cut(s) 604, 645
CviQI GTAC 1 cut(s) 499
DdeI CTNAG 2 cut(s) 395, 588
DpnI GATC 3 cut(s) 371, 442, 593
DpnII GATC 3 cut(s) 369, 440, 591
DraIII CACNNNGTG 1 cut(s) 328
DrdI GACNNNNNNGTC 1 cut(s) 217
DseDI GACNNNNNNGTC 1 cut(s) 217
EaeI YGGCCR 2 cut(s) 102, 606
EagI CGGCCG 1 cut(s) 102
EciI GGCGGA 1 cut(s) 504
EclXI CGGCCG 1 cut(s) 102
Eco130I CCWWGG 1 cut(s) 528
Eco147I AGGCCT 1 cut(s) 251
Eco47I GGWCC 5 cut(s) 291, 319, 348, 418, 480
Eco52I CGGCCG 1 cut(s) 102
Eco57I CTGAAG 1 cut(s) 385
Eco72I CACGTG 2 cut(s) 145, 325
Eco88I CYCGRG 3 cut(s) 365, 428, 476
EcoO109I RGGNCCY 1 cut(s) 199
EcoRII CCWGG 1 cut(s) 276
EcoT14I CCWWGG 1 cut(s) 528
ErhI CCWWGG 1 cut(s) 528
Esp3I CGTCTC 1 cut(s) 530
FaeI CATG 2 cut(s) 607, 648
FaiI YATR 2 cut(s) 605, 646
FaqI GGGAC 4 cut(s) 191, 304, 431, 493
FatI CATG 2 cut(s) 603, 644
FauI CCCGC 2 cut(s) 337, 349
FblI GTMKAC 1 cut(s) 552
Fnu4HI GCNGC 8 cut(s) 99, 102, 105, 108, 172, 230, 274, 568
FokI GGATG 1 cut(s) 601
Fsp4HI GCNGC 8 cut(s) 99, 102, 105, 108, 172, 230, 274, 568
GlaI GCGC 4 cut(s) 131, 233, 362, 566
GluI GCNGC 8 cut(s) 99, 102, 105, 108, 172, 230, 274, 568
HaeII RGCGCY 2 cut(s) 235, 364
HaeIII GGCC 5 cut(s) 104, 200, 251, 336, 608
HapII CCGG 4 cut(s) 294, 313, 424, 518
HhaI GCGC 4 cut(s) 132, 234, 363, 567
Hin1II CATG 2 cut(s) 607, 648
Hin6I GCGC 4 cut(s) 130, 232, 361, 565
HinP1I GCGC 4 cut(s) 130, 232, 361, 565
HincII GTYRAC 1 cut(s) 553
HindII GTYRAC 1 cut(s) 553
HinfI GANTC 3 cut(s) 461, 474, 494
HpaII CCGG 4 cut(s) 294, 313, 424, 518
HphI GGTGA 1 cut(s) 439
Hpy166II GTNNAC 4 cut(s) 322, 473, 508, 553
Hpy188I TCNGA 1 cut(s) 591
Hpy188III TCNNGA 8 cut(s) 208, 268, 313, 367, 394, 430, 478, 645
Hpy8I GTNNAC 4 cut(s) 322, 473, 508, 553
Hpy99I CGWCG 6 cut(s) 290, 302, 380, 383, 488, 554
HpyAV CCTTC 2 cut(s) 15, 310
HpyCH4III ACNGT 2 cut(s) 214, 484
HpyCH4IV ACGT 7 cut(s) 144, 300, 324, 390, 501, 510, 539
HpyCH4V TGCA 4 cut(s) 16, 187, 570, 577
HpyF10VI GCNNNNNNNGC 6 cut(s) 104, 107, 113, 303, 360, 593
HpyF3I CTNAG 2 cut(s) 395, 588
HpySE526I ACGT 7 cut(s) 144, 300, 324, 390, 501, 510, 539
Hsp92II CATG 2 cut(s) 607, 648
HspAI GCGC 4 cut(s) 130, 232, 361, 565
Kpn2I TCCGGA 1 cut(s) 312
KspI CCGCGG 3 cut(s) 102, 180, 345
Kzo9I GATC 3 cut(s) 369, 440, 591
LmnI GCTCC 4 cut(s) 179, 315, 358, 459
Lsp1109I GCAGC 4 cut(s) 119, 158, 260, 554
MaeII ACGT 7 cut(s) 144, 300, 324, 390, 501, 510, 539
MaeIII GTNAC 2 cut(s) 445, 626
MalI GATC 3 cut(s) 371, 442, 593
MboI GATC 3 cut(s) 369, 440, 591
MflI RGATCY 1 cut(s) 369
MhlI GDGCHC 1 cut(s) 308
MlsI TGGCCA 1 cut(s) 608
MluCI AATT 3 cut(s) 17, 46, 83
MluNI TGGCCA 1 cut(s) 608
MlyI GAGTC 3 cut(s) 455, 468, 503
MnlI CCTC 9 cut(s) 19, 112, 143, 190, 275, 347, 374, 383, 526
Mox20I TGGCCA 1 cut(s) 608
MroI TCCGGA 1 cut(s) 312
MscI TGGCCA 1 cut(s) 608
MseI TTAA 1 cut(s) 68
MslI CAYNNNNRTG 1 cut(s) 560
Msp20I TGGCCA 1 cut(s) 608
MspA1I CMGCKG 4 cut(s) 101, 110, 179, 344
MspI CCGG 4 cut(s) 294, 313, 424, 518
MspR9I CCNGG 2 cut(s) 278, 519
MvaI CCWGG 1 cut(s) 278
MvnI CGCG 5 cut(s) 101, 130, 179, 344, 596
MwoI GCNNNNNNNGC 6 cut(s) 104, 107, 113, 303, 360, 593
NciI CCSGG 1 cut(s) 519
NdeII GATC 3 cut(s) 369, 440, 591
NlaIII CATG 2 cut(s) 607, 648
NlaIV GGNNCC 5 cut(s) 201, 292, 349, 419, 481
NmeAIII GCCGAG 1 cut(s) 492
NmuCI GTSAC 1 cut(s) 445
NotI GCGGCCGC 1 cut(s) 102
OliI CACNNNNGTG 1 cut(s) 560
PaeR7I CTCGAG 2 cut(s) 365, 428
PagI TCATGA 1 cut(s) 644
PceI AGGCCT 1 cut(s) 251
PcsI WCGNNNNNNNCGW 7 cut(s) 201, 294, 372, 387, 483, 507, 558
Pfl23II CGTACG 1 cut(s) 498
PkrI GCNGC 8 cut(s) 100, 103, 106, 109, 173, 231, 275, 569
PleI GAGTC 3 cut(s) 455, 468, 502
PmaCI CACGTG 2 cut(s) 145, 325
PmlI CACGTG 2 cut(s) 145, 325
PpsI GAGTC 3 cut(s) 455, 468, 502
Ppu21I YACGTR 3 cut(s) 145, 325, 502
PshBI ATTAAT 1 cut(s) 68
Psp6I CCWGG 1 cut(s) 276
PspCI CACGTG 2 cut(s) 145, 325
PspGI CCWGG 1 cut(s) 276
PspLI CGTACG 1 cut(s) 498
PspN4I GGNNCC 5 cut(s) 201, 292, 349, 419, 481
PspPI GGNCC 7 cut(s) 199, 291, 319, 334, 348, 418, 480
PstNI CAGNNNCTG 1 cut(s) 583
PsuI RGATCY 1 cut(s) 369
PvuII CAGCTG 1 cut(s) 110
RsaI GTAC 1 cut(s) 500
RsaNI GTAC 1 cut(s) 499
RseI CAYNNNNRTG 1 cut(s) 560
SacII CCGCGG 3 cut(s) 102, 180, 345
SalI GTCGAC 1 cut(s) 551
SaqAI TTAA 1 cut(s) 68
SatI GCNGC 8 cut(s) 99, 102, 105, 108, 172, 230, 274, 568
Sau3AI GATC 3 cut(s) 369, 440, 591
Sau96I GGNCC 7 cut(s) 199, 291, 319, 334, 348, 418, 480
SchI GAGTC 3 cut(s) 455, 468, 503
ScrFI CCNGG 2 cut(s) 278, 519
SduI GDGCHC 1 cut(s) 308
SfcI CTRYAG 1 cut(s) 111
Sfr274I CTCGAG 2 cut(s) 365, 428
Sfr303I CCGCGG 3 cut(s) 102, 180, 345
SgrBI CCGCGG 3 cut(s) 102, 180, 345
SinI GGWCC 5 cut(s) 291, 319, 348, 418, 480
SlaI CTCGAG 2 cut(s) 365, 428
SmiMI CAYNNNNRTG 1 cut(s) 560
SmlI CTYRAG 3 cut(s) 266, 365, 428
SmoI CTYRAG 3 cut(s) 266, 365, 428
Sse9I AATT 3 cut(s) 17, 46, 83
SseBI AGGCCT 1 cut(s) 251
StuI AGGCCT 1 cut(s) 251
StyD4I CCNGG 2 cut(s) 276, 517
StyI CCWWGG 1 cut(s) 528
TaaI ACNGT 2 cut(s) 214, 484
TaiI ACGT 7 cut(s) 147, 303, 327, 393, 504, 513, 542
TaqI TCGA 7 cut(s) 195, 237, 285, 366, 375, 429, 552
TasI AATT 3 cut(s) 17, 46, 83
TauI GCSGC 4 cut(s) 101, 104, 107, 232
Tru1I TTAA 1 cut(s) 68
Tru9I TTAA 1 cut(s) 68
TscAI CASTG 3 cut(s) 18, 173, 409
TseFI GTSAC 1 cut(s) 445
TseI GCWGC 4 cut(s) 107, 171, 273, 567
Tsp45I GTSAC 1 cut(s) 445
TspGWI ACGGA 2 cut(s) 371, 433
TspRI CASTG 3 cut(s) 18, 173, 409
VpaK11BI GGWCC 5 cut(s) 291, 319, 348, 418, 480
VspI ATTAAT 1 cut(s) 68
XhoI CTCGAG 2 cut(s) 365, 428
XmiI GTMKAC 1 cut(s) 552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.