Prupe.2G258300_v2.0.a1

Copper transport protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
26934719 .. 26935568
850 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G258300.1

Sequence Viewer

Length: 243 bp
ATGGGAAATGTTGTGGAATTGAAGGTGGGTTTGCATTGCGAAGAATGCATCAAGAAAATCTTGAAGGCCATCAAGAAGATCGAAGATATTGAAACATATAATGCGGACGCAGAACTGAACAAGGTCACAGTGACTGGAAACGTTACAACAGAAGAAGTTGTTAGGGTTCTTCAAAAGATTGGAAAGATGGCAACCACTTGGGAAGGAGAAGGGCAAGGAGAAGGAGAGGGAGTAAATAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

81

Amino Acids

8.74

Weight (kDa)

4.96

Isoelectric Point (pI)

30.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016664)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G05365
fragaria_vesca FvH4_7g25401 FvH4_7g25401
malus_domestica MD01G1160400.v1.1
prunus_persica Prupe.2G258300_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0371361
rosa_multiflora Rmu_sc0000809.1_g000036
rosa_roxburghii Rroxscaffold_4G00285760
rosa_rugosa Rorug01G0363300
rosa_samantha Rh1AG373200 Rh1BG336700 Rh1CG350200 Rh1DG367800
rosa_wichuraiana Rw1G032840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 104
AclI AACGTT 1 cut(s) 141
AgsI TTSAA 4 cut(s) 22, 64, 92, 173
AlwNI CAGNNNCTG 1 cut(s) 134
AoxI GGCC 1 cut(s) 66
BccI CCATC 2 cut(s) 77, 181
BmsI GCATC 1 cut(s) 57
BsaXI ACNNNNNCTCC 1 cut(s) 216
Bse1I ACTGG 1 cut(s) 139
Bse3DI GCAATG 1 cut(s) 34
BseMI GCAATG 1 cut(s) 34
BseNI ACTGG 1 cut(s) 139
BshFI GGCC 1 cut(s) 68
BsmI GAATGC 1 cut(s) 50
BsnI GGCC 1 cut(s) 68
Bsp143I GATC 1 cut(s) 78
BspACI CCGC 1 cut(s) 104
BspANI GGCC 1 cut(s) 68
BsrDI GCAATG 1 cut(s) 34
BsrI ACTGG 1 cut(s) 139
BssMI GATC 1 cut(s) 78
Bst4CI ACNGT 1 cut(s) 130
BstKTI GATC 1 cut(s) 81
BstMBI GATC 1 cut(s) 78
BstMWI GCNNNNNNNGC 1 cut(s) 45
BsuRI GGCC 1 cut(s) 68
BtsIMutI CAGTG 1 cut(s) 135
CaiI CAGNNNCTG 1 cut(s) 134
CseI GACGC 1 cut(s) 116
CviJI RGCY 1 cut(s) 68
CviKI_1 RGCY 1 cut(s) 68
DpnI GATC 1 cut(s) 80
DpnII GATC 1 cut(s) 78
EcoT22I ATGCAT 1 cut(s) 50
FaiI YATR 2 cut(s) 97, 99
FalI AAGNNNNNCTT 2 cut(s) 44, 76
HaeIII GGCC 1 cut(s) 68
HgaI GACGC 1 cut(s) 116
Hpy188III TCNNGA 3 cut(s) 52, 61, 73
HpyAV CCTTC 5 cut(s) 16, 58, 197, 203, 215
HpyCH4III ACNGT 1 cut(s) 130
HpyCH4IV ACGT 1 cut(s) 141
HpyCH4V TGCA 2 cut(s) 34, 48
HpyF10VI GCNNNNNNNGC 1 cut(s) 45
HpySE526I ACGT 1 cut(s) 141
Kzo9I GATC 1 cut(s) 78
LpnPI CCDG 1 cut(s) 120
LweI GCATC 1 cut(s) 57
MaeII ACGT 1 cut(s) 141
MaeIII GTNAC 3 cut(s) 124, 130, 142
MalI GATC 1 cut(s) 80
MboI GATC 1 cut(s) 78
MboII GAAGA 5 cut(s) 53, 88, 95, 161, 164
MluCI AATT 2 cut(s) 17, 238
MnlI CCTC 1 cut(s) 220
Mph1103I ATGCAT 1 cut(s) 50
Mva1269I GAATGC 1 cut(s) 50
MwoI GCNNNNNNNGC 1 cut(s) 45
NdeII GATC 1 cut(s) 78
NmuCI GTSAC 2 cut(s) 124, 130
NsiI ATGCAT 1 cut(s) 50
PctI GAATGC 1 cut(s) 50
Psp1406I AACGTT 1 cut(s) 141
PstNI CAGNNNCTG 1 cut(s) 134
Sau3AI GATC 1 cut(s) 78
SetI ASST 3 cut(s) 27, 126, 144
SfaNI GCATC 1 cut(s) 57
SgeI CNNG 7 cut(s) 64, 73, 85, 133, 147, 210, 227
Sse9I AATT 2 cut(s) 17, 238
SsiI CCGC 1 cut(s) 104
TaaI ACNGT 1 cut(s) 130
TaiI ACGT 1 cut(s) 144
TaqI TCGA 1 cut(s) 81
TasI AATT 2 cut(s) 17, 238
TscAI CASTG 1 cut(s) 135
TseFI GTSAC 2 cut(s) 124, 130
Tsp45I GTSAC 2 cut(s) 124, 130
TspRI CASTG 1 cut(s) 135
Zsp2I ATGCAT 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.