Prupe.2G272900_v2.0.a1

nucleobase-ascorbate transporter

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
27592444 .. 27593140
697 bp
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UTR
Exon/CDS
Intron
Prupe.2G272900.1

Sequence Viewer

Length: 243 bp
ATGGCAGCTCCTAAACCAGAAGAGATAAGCCATCCACCAATGGACCAACTTCAAGACTTAGAGTACTGCATTGACTCAAACCCATCTTGGGGAACTGCTGTGATGATCCCATCCTTCCTTGTTCCTTTTATGGGTGGCACTGATTGTTGTGTAGGTTGCTTTGTGAAGGCTTTTGGAAGAATGGATGCATCATATTTTTTGCAAGGATATTATCTCTATGTGTATTTTTGTGATGGGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

81

Amino Acids

8.95

Weight (kDa)

4.12

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 100
AfaI GTAC 1 cut(s) 65
AfiI CCNNNNNNNGG 3 cut(s) 88, 89, 131
AgsI TTSAA 1 cut(s) 53
AluBI AGCT 1 cut(s) 8
AluI AGCT 1 cut(s) 8
AlwI GGATC 1 cut(s) 100
ApeKI GCWGC 1 cut(s) 5
AspS9I GGNCC 1 cut(s) 43
AvaII GGWCC 1 cut(s) 43
BbvI GCAGC 1 cut(s) 17
BccI CCATC 4 cut(s) 39, 91, 118, 227
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
BmcAI AGTACT 1 cut(s) 65
Bme18I GGWCC 1 cut(s) 43
BmgT120I GGNCC 1 cut(s) 43
BmsI GCATC 2 cut(s) 175, 197
Bsc4I CCNNNNNNNGG 3 cut(s) 88, 89, 131
BseGI GGATG 3 cut(s) 31, 110, 190
BseLI CCNNNNNNNGG 3 cut(s) 88, 89, 131
BseXI GCAGC 1 cut(s) 17
BslI CCNNNNNNNGG 3 cut(s) 88, 89, 131
Bsp143I GATC 1 cut(s) 105
BspPI GGATC 1 cut(s) 100
BssMI GATC 1 cut(s) 105
Bst6I CTCTTC 1 cut(s) 15
BstDEI CTNAG 1 cut(s) 58
BstF5I GGATG 3 cut(s) 31, 110, 190
BstKTI GATC 1 cut(s) 108
BstMBI GATC 1 cut(s) 105
BstV1I GCAGC 1 cut(s) 17
BtsCI GGATG 3 cut(s) 31, 110, 190
BtsIMutI CAGTG 1 cut(s) 138
Cfr13I GGNCC 1 cut(s) 43
Csp6I GTAC 1 cut(s) 64
CviJI RGCY 3 cut(s) 8, 30, 170
CviKI_1 RGCY 3 cut(s) 8, 30, 170
CviQI GTAC 1 cut(s) 64
DdeI CTNAG 1 cut(s) 58
DpnI GATC 1 cut(s) 107
DpnII GATC 1 cut(s) 105
Eam1104I CTCTTC 1 cut(s) 15
EarI CTCTTC 1 cut(s) 15
Eco47I GGWCC 1 cut(s) 43
EcoT22I ATGCAT 1 cut(s) 190
FaiI YATR 3 cut(s) 131, 193, 219
Fnu4HI GCNGC 1 cut(s) 6
FokI GGATG 3 cut(s) 18, 97, 197
Fsp4HI GCNGC 1 cut(s) 6
GluI GCNGC 1 cut(s) 6
HinfI GANTC 1 cut(s) 74
Hpy188III TCNNGA 1 cut(s) 53
HpyAV CCTTC 2 cut(s) 124, 160
HpyCH4V TGCA 3 cut(s) 69, 188, 202
HpyF3I CTNAG 1 cut(s) 58
Kzo9I GATC 1 cut(s) 105
LmnI GCTCC 1 cut(s) 13
LpnPI CCDG 1 cut(s) 30
Lsp1109I GCAGC 1 cut(s) 17
LweI GCATC 2 cut(s) 175, 197
MalI GATC 1 cut(s) 107
MboI GATC 1 cut(s) 105
MboII GAAGA 2 cut(s) 32, 189
MlyI GAGTC 1 cut(s) 68
Mph1103I ATGCAT 1 cut(s) 190
NdeII GATC 1 cut(s) 105
NsiI ATGCAT 1 cut(s) 190
PkrI GCNGC 1 cut(s) 7
PleI GAGTC 1 cut(s) 68
PpsI GAGTC 1 cut(s) 68
PspPI GGNCC 1 cut(s) 43
RsaI GTAC 1 cut(s) 65
RsaNI GTAC 1 cut(s) 64
SatI GCNGC 1 cut(s) 6
Sau3AI GATC 1 cut(s) 105
Sau96I GGNCC 1 cut(s) 43
ScaI AGTACT 1 cut(s) 65
SchI GAGTC 1 cut(s) 68
SetI ASST 2 cut(s) 10, 157
SfaNI GCATC 2 cut(s) 175, 197
SgeI CNNG 5 cut(s) 29, 65, 99, 131, 215
SinI GGWCC 1 cut(s) 43
TatI WGTACW 1 cut(s) 63
TscAI CASTG 1 cut(s) 145
TseI GCWGC 1 cut(s) 5
TspRI CASTG 1 cut(s) 145
VpaK11BI GGWCC 1 cut(s) 43
ZrmI AGTACT 1 cut(s) 65
Zsp2I ATGCAT 1 cut(s) 190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.