Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0013305

Physical Location & Seq

Genomic Coordinates Reverse (-)

29153262 .. 29156709

Gene Structure 3448 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G306200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 699 bp

ATGCAGCGGTTGAAGGTTCCGAAGCGGGTCCAGGTGGACGAATCCCCAACGGAGATTCCCAAATACGATGTGGCGGAAGATGAAGAGGGGAACCCCTCGGAAGCCCTAGGCCGCCAAAACGACAACGGAGAAGATAATGGCGGAATTAGAAATAGCAACGTCACTGAAGATCAGGAGCCCTTCATGGGGGTCAAGGTCCGAAGAAAAGCTTCGTTTCGCAGAGAATACAAAGGAGACTACATCGACGTCCGTTCCAATCCGTACTTGATGAAAATCTTGCAGAAACAAGGTGACAAGGAGGTTCTGTTTGCCGATAAAGTTTTGAAGTTTACTGCTTCTGGGAAGATGAAGCGGCGCATTTTGATGATCACTGACTTTGCCATCTACATTGTTGACCCAGAGGCCGATGCACTGAAACGGAGGATAGCCCTTGCAGCTGTAGAGAGGATGTGCTTGAGTGAACTAAGTGATAACTTTTTCGCAATTATCATTCCAACTGAGTATGATGTACTCATGGCTAGTACTCGCAAGACTGAAATCGTTACTGTCTTAGTTGAAGCTACTAAGAGTGCTTCTGATTACGAACTTGAAGTTTGTTTCTCTAACAGTTTTGAGTATAATGCAACTGCAGAATTCGTGAAGGAGGTTCAATTTGAGGAAGTTGAAGGGGGTGTTAAAACAAGAATTTTGAAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005543 GO:0005547 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0005938 GO:0006810 GO:0006897 GO:0006909 GO:0006911 GO:0006935 GO:0006996 GO:0007010 GO:0007015 GO:0008092 GO:0008150 GO:0008154 GO:0008289 GO:0009605 GO:0009987 GO:0010324 GO:0015629 GO:0015630 GO:0016020 GO:0016043 GO:0016192 GO:0016459 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0030027 GO:0030029 GO:0030036 GO:0030041 GO:0030054 GO:0030175 GO:0030898 GO:0031143 GO:0031252 GO:0032991 GO:0034622 GO:0035091 GO:0040011 GO:0042221 GO:0042330 GO:0042623 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043327 GO:0043933 GO:0044085 GO:0044291 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0044877 GO:0050896 GO:0051015 GO:0051179 GO:0051233 GO:0051234 GO:0051258 GO:0061024 GO:0061851 GO:0065003 GO:0071840 GO:0071944 GO:0097435 GO:0098657 GO:0098858 GO:0099024 GO:0099568 GO:0120025 GO:0120038 GO:1901981

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myosin_TH1

Protein Analysis

233

Amino Acids

26.46

Weight (kDa)

5.18

Isoelectric Point (pI)

44.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013305)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53310 AT5G53310
fragaria_vesca	FvH4_7g30910 FvH4_7g30910
malus_domestica	MD01G1214200.v1.1 MD07G1283800.v1.1
prunus_persica	Prupe.2G306200_v2.0.a1
pyrus_communis	pycom01g22490
rosa_chinensis	RchiOBHm_Chr1g0379991
rosa_laevigata	RLG00000026342
rosa_multiflora	Rmu_sc0004184.1_g000014
rosa_rugosa	Rorug01G0416200.1 Rorug01G0416300.1
rosa_samantha	Rh1AG440900 Rh1BG396600 Rh1CG409800 Rh1DG427400
rosa_wichuraiana	Rw1G038340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	249
AciI	CCGC	6 cut(s)	7, 25, 74, 112, 141, 352
AcsI	RAATTY	2 cut(s)	632, 684
AcuI	CTGAAG	1 cut(s)	186
AcyI	GRCGYC	1 cut(s)	246
AfaI	GTAC	3 cut(s)	263, 510, 523
AfiI	CCNNNNNNNGG	2 cut(s)	185, 186
AgsI	TTSAA	7 cut(s)	13, 325, 557, 590, 650, 665, 691
AjnI	CCWGG	1 cut(s)	30
AluBI	AGCT	3 cut(s)	209, 437, 560
AluI	AGCT	3 cut(s)	209, 437, 560
Alw26I	GTCTC	1 cut(s)	228
AoxI	GGCC	2 cut(s)	109, 402
ApeKI	GCWGC	2 cut(s)	4, 434
ApoI	RAATTY	2 cut(s)	632, 684
Asp700I	GAANNNNTTC	1 cut(s)	208
AspA2I	CCTAGG	1 cut(s)	106
AspLEI	GCGC	1 cut(s)	357
AspS9I	GGNCC	2 cut(s)	28, 196
AsuHPI	GGTGA	1 cut(s)	302
AvaII	GGWCC	2 cut(s)	28, 196
AvrII	CCTAGG	1 cut(s)	106
BanII	GRGCYC	1 cut(s)	180
BbvI	GCAGC	2 cut(s)	16, 446
BccI	CCATC	1 cut(s)	389
BciT130I	CCWGG	1 cut(s)	32
BclI	TGATCA	1 cut(s)	366
BcoDI	GTCTC	1 cut(s)	228
BfaI	CTAG	2 cut(s)	107, 519
BfmI	CTRYAG	2 cut(s)	438, 627
BisI	GCNGC	4 cut(s)	5, 112, 353, 435
BlnI	CCTAGG	1 cut(s)	106
BlsI	GCNGC	4 cut(s)	6, 113, 354, 436
BmcAI	AGTACT	1 cut(s)	523
Bme1390I	CCNGG	1 cut(s)	32
Bme18I	GGWCC	2 cut(s)	28, 196
BmgT120I	GGNCC	2 cut(s)	28, 196
BmiI	GGNNCC	4 cut(s)	18, 29, 92, 177
BmrFI	CCNGG	1 cut(s)	32
BmsI	GCATC	1 cut(s)	397
BpuEI	CTTGAG	1 cut(s)	475
BsaBI	GATNNNNATC	1 cut(s)	272
BsaHI	GRCGYC	1 cut(s)	246
BsaJI	CCNNGG	2 cut(s)	96, 106
BsaXI	ACNNNNNCTCC	2 cut(s)	290, 320
Bsc4I	CCNNNNNNNGG	2 cut(s)	185, 186
Bse8I	GATNNNNATC	1 cut(s)	272
BseBI	CCWGG	1 cut(s)	32
BseDI	CCNNGG	2 cut(s)	96, 106
BseGI	GGATG	1 cut(s)	453
BseJI	GATNNNNATC	1 cut(s)	272
BseLI	CCNNNNNNNGG	2 cut(s)	185, 186
BseMII	CTCAG	1 cut(s)	489
BseXI	GCAGC	2 cut(s)	16, 446
BshFI	GGCC	2 cut(s)	111, 404
BslI	CCNNNNNNNGG	2 cut(s)	185, 186
BsmAI	GTCTC	1 cut(s)	228
BsnI	GGCC	2 cut(s)	111, 404
Bsp1286I	GDGCHC	1 cut(s)	180
Bsp143I	GATC	2 cut(s)	169, 366
BspACI	CCGC	6 cut(s)	7, 25, 74, 112, 141, 352
BspANI	GGCC	2 cut(s)	111, 404
BspCNI	CTCAG	1 cut(s)	490
BspLI	GGNNCC	4 cut(s)	18, 29, 92, 177
BspMAI	CTGCAG	1 cut(s)	631
BssECI	CCNNGG	2 cut(s)	96, 106
BssMI	GATC	2 cut(s)	169, 366
BssNI	GRCGYC	1 cut(s)	246
BssT1I	CCWWGG	1 cut(s)	106
Bst2UI	CCWGG	1 cut(s)	32
Bst4CI	ACNGT	2 cut(s)	547, 608
Bst6I	CTCTTC	1 cut(s)	78
BstACI	GRCGYC	1 cut(s)	246
BstDEI	CTNAG	4 cut(s)	464, 498, 550, 564
BstF5I	GGATG	1 cut(s)	453
BstHHI	GCGC	1 cut(s)	357
BstKTI	GATC	2 cut(s)	172, 369
BstMAI	GTCTC	1 cut(s)	228
BstMBI	GATC	2 cut(s)	169, 366
BstMWI	GCNNNNNNNGC	1 cut(s)	434
BstNI	CCWGG	1 cut(s)	32
BstSCI	CCNGG	1 cut(s)	30
BstSFI	CTRYAG	2 cut(s)	438, 627
BstV1I	GCAGC	2 cut(s)	16, 446
BsuRI	GGCC	2 cut(s)	111, 404
BtsCI	GGATG	1 cut(s)	453
BtsIMutI	CAGTG	3 cut(s)	162, 369, 410
CfoI	GCGC	1 cut(s)	357
Cfr13I	GGNCC	2 cut(s)	28, 196
Csp6I	GTAC	3 cut(s)	262, 509, 522
CviAII	CATG	2 cut(s)	184, 514
CviJI	RGCY	9 cut(s)	104, 111, 178, 209, 404, 428, 437, 518, 560
CviKI_1	RGCY	9 cut(s)	104, 111, 178, 209, 404, 428, 437, 518, 560
CviQI	GTAC	3 cut(s)	262, 509, 522
DdeI	CTNAG	4 cut(s)	464, 498, 550, 564
DpnI	GATC	2 cut(s)	171, 368
DpnII	GATC	2 cut(s)	169, 366
Eam1104I	CTCTTC	1 cut(s)	78
EarI	CTCTTC	1 cut(s)	78
EciI	GGCGGA	2 cut(s)	89, 156
Eco130I	CCWWGG	1 cut(s)	106
Eco24I	GRGCYC	1 cut(s)	180
Eco47I	GGWCC	2 cut(s)	28, 196
Eco57I	CTGAAG	1 cut(s)	186
EcoRI	GAATTC	1 cut(s)	632
EcoRII	CCWGG	1 cut(s)	30
EcoT14I	CCWWGG	1 cut(s)	106
EcoT38I	GRGCYC	1 cut(s)	180
ErhI	CCWWGG	1 cut(s)	106
FaeI	CATG	2 cut(s)	187, 517
FaiI	YATR	4 cut(s)	185, 504, 515, 618
FalI	AAGNNNNNCTT	2 cut(s)	193, 225
FatI	CATG	2 cut(s)	183, 513
FauI	CCCGC	1 cut(s)	18
FbaI	TGATCA	1 cut(s)	366
Fnu4HI	GCNGC	4 cut(s)	5, 112, 353, 435
FokI	GGATG	1 cut(s)	460
FriOI	GRGCYC	1 cut(s)	180
Fsp4HI	GCNGC	4 cut(s)	5, 112, 353, 435
FspBI	CTAG	2 cut(s)	107, 519
GlaI	GCGC	1 cut(s)	356
GluI	GCNGC	4 cut(s)	5, 112, 353, 435
HaeIII	GGCC	2 cut(s)	111, 404
HhaI	GCGC	1 cut(s)	357
Hin1I	GRCGYC	1 cut(s)	246
Hin1II	CATG	2 cut(s)	187, 517
Hin6I	GCGC	1 cut(s)	355
HinP1I	GCGC	1 cut(s)	355
HincII	GTYRAC	1 cut(s)	394
HindII	GTYRAC	1 cut(s)	394
HindIII	AAGCTT	1 cut(s)	207
HinfI	GANTC	2 cut(s)	41, 55
HphI	GGTGA	1 cut(s)	302
Hpy166II	GTNNAC	4 cut(s)	37, 330, 394, 461
Hpy188I	TCNGA	4 cut(s)	21, 100, 200, 577
Hpy188III	TCNNGA	2 cut(s)	173, 637
Hpy8I	GTNNAC	4 cut(s)	37, 330, 394, 461
Hpy99I	CGWCG	1 cut(s)	248
HpyAV	CCTTC	4 cut(s)	7, 190, 634, 659
HpyCH4III	ACNGT	2 cut(s)	547, 608
HpyCH4IV	ACGT	2 cut(s)	159, 246
HpyCH4V	TGCA	6 cut(s)	4, 280, 410, 434, 623, 629
HpyF10VI	GCNNNNNNNGC	1 cut(s)	434
HpyF3I	CTNAG	4 cut(s)	464, 498, 550, 564
HpySE526I	ACGT	2 cut(s)	159, 246
Hsp92I	GRCGYC	1 cut(s)	246
Hsp92II	CATG	2 cut(s)	187, 517
HspAI	GCGC	1 cut(s)	355
Ksp22I	TGATCA	1 cut(s)	366
Kzo9I	GATC	2 cut(s)	169, 366
LmnI	GCTCC	1 cut(s)	175
LpnPI	CCDG	5 cut(s)	17, 44, 158, 324, 411
Lsp1109I	GCAGC	2 cut(s)	16, 446
LweI	GCATC	1 cut(s)	397
MaeI	CTAG	2 cut(s)	107, 519
MaeII	ACGT	2 cut(s)	159, 246
MaeIII	GTNAC	3 cut(s)	160, 290, 541
MalI	GATC	2 cut(s)	171, 368
MboI	GATC	2 cut(s)	169, 366
MboII	GAAGA	6 cut(s)	89, 95, 143, 179, 213, 355
MhlI	GDGCHC	1 cut(s)	180
MluCI	AATT	5 cut(s)	144, 483, 632, 650, 684
MmeI	TCCRAC	1 cut(s)	518
MnlI	CCTC	8 cut(s)	79, 106, 292, 394, 414, 438, 637, 649
MroXI	GAANNNNTTC	1 cut(s)	208
MseI	TTAA	1 cut(s)	675
MslI	CAYNNNNRTG	1 cut(s)	362
MspA1I	CMGCKG	2 cut(s)	7, 437
MspR9I	CCNGG	1 cut(s)	32
MvaI	CCWGG	1 cut(s)	32
MwoI	GCNNNNNNNGC	1 cut(s)	434
NdeII	GATC	2 cut(s)	169, 366
NlaIII	CATG	2 cut(s)	187, 517
NlaIV	GGNNCC	4 cut(s)	18, 29, 92, 177
NmuCI	GTSAC	2 cut(s)	160, 290
PdmI	GAANNNNTTC	1 cut(s)	208
PfeI	GAWTC	2 cut(s)	41, 55
PkrI	GCNGC	4 cut(s)	6, 113, 354, 436
Psp6I	CCWGG	1 cut(s)	30
PspGI	CCWGG	1 cut(s)	30
PspN4I	GGNNCC	4 cut(s)	18, 29, 92, 177
PspPI	GGNCC	2 cut(s)	28, 196
PstI	CTGCAG	1 cut(s)	631
PvuII	CAGCTG	1 cut(s)	437
RsaI	GTAC	3 cut(s)	263, 510, 523
RsaNI	GTAC	3 cut(s)	262, 509, 522
RseI	CAYNNNNRTG	1 cut(s)	362
SaqAI	TTAA	1 cut(s)	675
SatI	GCNGC	4 cut(s)	5, 112, 353, 435
Sau3AI	GATC	2 cut(s)	169, 366
Sau96I	GGNCC	2 cut(s)	28, 196
ScaI	AGTACT	1 cut(s)	523
ScrFI	CCNGG	1 cut(s)	32
SduI	GDGCHC	1 cut(s)	180
SfaNI	GCATC	1 cut(s)	397
SfcI	CTRYAG	2 cut(s)	438, 627
SinI	GGWCC	2 cut(s)	28, 196
SmiMI	CAYNNNNRTG	1 cut(s)	362
SmlI	CTYRAG	1 cut(s)	454
SmoI	CTYRAG	1 cut(s)	454
Sse9I	AATT	5 cut(s)	144, 483, 632, 650, 684
SsiI	CCGC	6 cut(s)	7, 25, 74, 112, 141, 352
SspMI	CTAG	2 cut(s)	107, 519
StyD4I	CCNGG	1 cut(s)	30
StyI	CCWWGG	1 cut(s)	106
TaaI	ACNGT	2 cut(s)	547, 608
TaiI	ACGT	2 cut(s)	162, 249
TaqI	TCGA	1 cut(s)	243
TasI	AATT	5 cut(s)	144, 483, 632, 650, 684
TatI	WGTACW	2 cut(s)	508, 521
TauI	GCSGC	2 cut(s)	114, 355
TfiI	GAWTC	2 cut(s)	41, 55
Tru1I	TTAA	1 cut(s)	675
Tru9I	TTAA	1 cut(s)	675
TscAI	CASTG	3 cut(s)	169, 376, 417
TseFI	GTSAC	2 cut(s)	160, 290
TseI	GCWGC	2 cut(s)	4, 434
Tsp45I	GTSAC	2 cut(s)	160, 290
TspDTI	ATGAA	4 cut(s)	96, 172, 284, 362
TspGWI	ACGGA	5 cut(s)	65, 141, 239, 249, 433
TspRI	CASTG	3 cut(s)	169, 376, 417
VpaK11BI	GGWCC	2 cut(s)	28, 196
XapI	RAATTY	2 cut(s)	632, 684
XcmI	CCANNNNNNNNNTGG	1 cut(s)	67
XmaJI	CCTAGG	1 cut(s)	106
XmnI	GAANNNNTTC	1 cut(s)	208
XspI	CTAG	2 cut(s)	107, 519
ZraI	GACGTC	1 cut(s)	247
ZrmI	AGTACT	1 cut(s)	523

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.