Prupe.3G022700_v2.0.a1

V-type proton ATPase catalytic subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0008079
Physical Location & Seq
Reverse (-)
1675602 .. 1681760
6159 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G022700.1

Sequence Viewer

Length: 1872 bp
ATGCCGGCGGTGTACGGTTCCCGATTGACCACATTTGAGGACTCCGAGAAGGAGAGCGAGTATGGCTACGTCCGCAAGGTCTCAGGACCAGTCGTCGTCGCAGATGGCATGGCTGGAGCTGCTATGTACGAGCTGGTTCGTGTTGGACATGATAATTTGATTGGTGAAATTATTCGGTTAGAAGGAGATTCTGCCACAATCCAAGTTTATGAGGAAACAGCTGGGTTGATGGTGAACGATCCTGTTCTACGTACTCGGAAGCCTTTATCAGTGGAGTTGGGACCTGGAATATTGGGAAATATTTTTGACGGAATCCAGAGGCCTTTGAAAACTATTGCAAAGATATCTGGTGATGTCTATATCCCACGTGGTGTATCTGTTCCAGCTCTTGACAAAGATATACTTTGGGAGTTTCAGCCCAAAAAAATAGGTGAAGGTGATACTCTCACTGGTGGAGACTTGTATGCTACTGTCTTTGAAAATAGTCTGATGGAGCACCATGTTGCGCTTCCTCCCGATGCAATGGGCAAAATTACTTACGTCGCACCACCTGGTCAATATTCATTGAAGGATACTGTGTTAGAGCTCGAGTTTCAAGGTGTCAAAAAGAAATTTACTATGCTTCAGACTTGGCCTGTACGTACACCAAGGCCTGTTGCATCAAAGGTTGCTGCTGATACCCCTCTACTCACTGGACAGCGTGTTCTTGATGCCCTTTTCCCCTCTGTTCTTGGTGGGACGTGTGCCATTCCTGGGGCTTTTGGTTGTGGAAAAACGGTTATTAGTCAAGCTCTTTCAAAGTACTCTAACTCAGACACTGTAGTTTATGTTGGTTGTGGAGAACGTGGAAATGAAATGGCCGAGGTGCTTATGGATTTTCCTCAATTGACCATGACTTTGCCTGATGGCCGTGAAGAATCTGTGATGAAGCGCACAACACTTGTGGCCAACACTTCTAACATGCCTGTGGCTGCTCGTGAAGCTTCAATCTATACTGGAATCACTATTGCTGAATACTTCAGAGATATGGGCTACAATGTCAGCATGATGGCAGATTCAACTTCTCGATGGGCTGAAGCATTGCGTGAGATTTCTGGGCGGCTGGCAGAAATGCCAGCAGATAGTGGATATCCTGCTTATTTGGCAGCTCGTTTAGCATCATTTTATGAACGTGCGGGTAAAGTGAAATGTCTTGGTGGACCAGAGCGTACTGGTAGTGTGACCATTGTTGGTGCTGTTTCTCCCCCAGGAGGAGATTTCTCAGATCCAGTGACATCTGCAACCCTTAGCATTGTACAGGTTTTCTGGGGTCTGGACAAAAAACTTGCCCAGAGGAAGCATTTTCCTTCTGTGAACTGGCTTATTTCCTACTCTAAGTACTCAACAGCATTGGAGTCTTTCTATGATCAATTTGATCCTGATTTTATCAACATCAGGACAAAGGCACGTGAGGTTTTGCAACGAGAAGATGATCTGAATGAAATTGTCCAACTTGTAGGAAAGGATGCTTTGGCTGAAGGAGATAAGATCACCTTAGAAACTGCAAAGCTTTTGAGGGAGGATTATCTCGCACAGAATGCATTTACTCCATATGACAAATTCTGCCCGTTCTACAAGTCTGTTTGGATGATGCGGAATATCATTCATTACTTTAATCTGGCCAATCAGGCAGTAGAGAAAGCAGCTGGTATGGATGGTCAAAAGATAAGTTACAGCCTAATCAAGCACCGTTTGGGAGATCTCTTTTACCGCCTTGTGTCACAAAAATTTGAGGATCCGGCAGAAGGGGAAGAAGTAATTGTGGGAAAATTTAAGAAGCTACACGAGGACCTGACAAGTGGTTTCCGCGCTCTTGAGGATGAAACCCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000325 GO:0002020 GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006970 GO:0006996 GO:0007030 GO:0007275 GO:0008150 GO:0008324 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009555 GO:0009628 GO:0009651 GO:0009941 GO:0009987 GO:0010256 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015672 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0019899 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030054 GO:0030312 GO:0031090 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0034220 GO:0036442 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044769 GO:0046961 GO:0048046 GO:0048229 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071840 GO:0071944 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:0099131 GO:0099132 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04145 ko04150 ko04721 ko04966 ko05110 ko05120 ko05323 map00190 map01100 map04145 map04150 map04721 map04966 map05110 map05120 map05323
Pfam Domains
Protein Families
ATP-synt_ab ATP-synt_ab_N ATP-synt_ab_Xtn

Protein Analysis

624

Amino Acids

68.69

Weight (kDa)

5.31

Isoelectric Point (pI)

30.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1848
AciI CCGC 7 cut(s) 8, 73, 1099, 1175, 1633, 1750, 1846
AclWI GGATC 5 cut(s) 233, 1259, 1409, 1769, 1782
AcoI YGGCCR 4 cut(s) 858, 907, 945, 1659
AcsI RAATTY 4 cut(s) 611, 1598, 1766, 1808
AcuI CTGAAG 4 cut(s) 608, 1003, 1095, 1536
AcvI CACGTG 2 cut(s) 368, 1448
AdeI CACNNNGTG 1 cut(s) 371
AfaI GTAC 9 cut(s) 14, 128, 253, 639, 643, 803, 1210, 1296, 1379
AfiI CCNNNNNNNGG 3 cut(s) 753, 1250, 1784
AflIII ACRYGT 1 cut(s) 740
AgsI TTSAA 7 cut(s) 328, 479, 568, 596, 798, 987, 1059
AhdI GACNNNNNGTC 1 cut(s) 92
AjiI CACGTC 1 cut(s) 741
AjnI CCWGG 4 cut(s) 283, 550, 751, 1246
AloI GAACNNNNNNTCC 2 cut(s) 687, 719
Alw21I GWGCWC 2 cut(s) 498, 588
Alw26I GTCTC 2 cut(s) 85, 450
AlwI GGATC 5 cut(s) 233, 1259, 1409, 1769, 1782
AlwNI CAGNNNCTG 1 cut(s) 818
Ama87I CYCGRG 1 cut(s) 587
AoxI GGCC 7 cut(s) 320, 632, 650, 858, 907, 945, 1659
ApeKI GCWGC 5 cut(s) 119, 671, 971, 1145, 1682
ApoI RAATTY 4 cut(s) 611, 1598, 1766, 1808
ArsI GACNNNNNNTTYG 2 cut(s) 880, 912
Asp700I GAANNNNTTC 1 cut(s) 171
AspLEI GCGC 3 cut(s) 508, 933, 1850
AspS9I GGNCC 4 cut(s) 86, 281, 1199, 1828
AsuHPI GGTGA 6 cut(s) 176, 244, 362, 443, 449, 1522
AvaI CYCGRG 1 cut(s) 587
AvaII GGWCC 4 cut(s) 86, 281, 1199, 1828
BalI TGGCCA 2 cut(s) 947, 1661
BamHI GGATCC 1 cut(s) 1774
BanII GRGCYC 1 cut(s) 588
BauI CACGAG 2 cut(s) 975, 1823
BbrPI CACGTG 2 cut(s) 368, 1448
Bbv12I GWGCWC 2 cut(s) 498, 588
BbvI GCAGC 5 cut(s) 106, 658, 958, 1157, 1694
BccI CCATC 7 cut(s) 98, 223, 484, 899, 1042, 1062, 1688
BceAI ACGGC 1 cut(s) 894
BciT130I CCWGG 4 cut(s) 285, 552, 753, 1248
BciVI GTATCC 1 cut(s) 565
BclI TGATCA 1 cut(s) 1405
BcoDI GTCTC 2 cut(s) 85, 450
BfmI CTRYAG 1 cut(s) 819
BfuI GTATCC 1 cut(s) 565
BglI GCCNNNNNGGC 1 cut(s) 1667
BglII AGATCT 1 cut(s) 1738
BisI GCNGC 6 cut(s) 120, 672, 972, 1100, 1146, 1683
BlsI GCNGC 6 cut(s) 121, 673, 973, 1101, 1147, 1684
BmcAI AGTACT 2 cut(s) 803, 1379
Bme1390I CCNGG 4 cut(s) 285, 552, 753, 1248
Bme18I GGWCC 4 cut(s) 86, 281, 1199, 1828
BmeRI GACNNNNNGTC 1 cut(s) 92
BmeT110I CYCGRG 1 cut(s) 587
BmgBI CACGTC 1 cut(s) 741
BmgT120I GGNCC 4 cut(s) 86, 281, 1199, 1828
BmiI GGNNCC 3 cut(s) 19, 282, 1776
BmrFI CCNGG 4 cut(s) 285, 552, 753, 1248
BmsI GCATC 6 cut(s) 508, 668, 700, 1166, 1495, 1620
BpmI CTGGAG 1 cut(s) 135
Bpu10I CCTNAGC 1 cut(s) 1286
BsaAI YACGTR 4 cut(s) 251, 368, 641, 1448
BsaI GGTCTC 1 cut(s) 85
BsaJI CCNNGG 4 cut(s) 647, 752, 861, 1246
BsaXI ACNNNNNCTCC 2 cut(s) 44, 74
Bsc4I CCNNNNNNNGG 3 cut(s) 753, 1250, 1784
Bse118I RCCGGY 1 cut(s) 4
Bse1I ACTGG 7 cut(s) 89, 454, 697, 1000, 1216, 1268, 1361
Bse3DI GCAATG 2 cut(s) 528, 1079
BseBI CCWGG 4 cut(s) 285, 552, 753, 1248
BseDI CCNNGG 4 cut(s) 647, 752, 861, 1246
BseGI GGATG 4 cut(s) 1510, 1632, 1699, 1864
BseLI CCNNNNNNNGG 3 cut(s) 753, 1250, 1784
BseMI GCAATG 2 cut(s) 528, 1079
BseMII CTCAG 3 cut(s) 96, 825, 1275
BseNI ACTGG 7 cut(s) 89, 454, 697, 1000, 1216, 1268, 1361
BseRI GAGGAG 1 cut(s) 1266
BseXI GCAGC 5 cut(s) 106, 658, 958, 1157, 1694
BseYI CCCAGC 1 cut(s) 221
Bsh1236I CGCG 1 cut(s) 1848
BshFI GGCC 7 cut(s) 322, 634, 652, 860, 909, 947, 1661
BsiHKAI GWGCWC 2 cut(s) 498, 588
BsiHKCI CYCGRG 1 cut(s) 587
BsiSI CCGG 2 cut(s) 5, 1778
BslFI GGGAC 2 cut(s) 294, 751
BslI CCNNNNNNNGG 3 cut(s) 753, 1250, 1784
BsmAI GTCTC 2 cut(s) 85, 450
BsmFI GGGAC 2 cut(s) 294, 751
BsmI GAATGC 1 cut(s) 1582
BsnI GGCC 7 cut(s) 322, 634, 652, 860, 909, 947, 1661
Bso31I GGTCTC 1 cut(s) 85
BsoBI CYCGRG 1 cut(s) 587
Bsp1286I GDGCHC 2 cut(s) 498, 588
Bsp1407I TGTACA 1 cut(s) 1294
Bsp143I GATC 8 cut(s) 238, 1264, 1405, 1414, 1471, 1527, 1738, 1774
BspACI CCGC 7 cut(s) 8, 73, 1099, 1175, 1633, 1750, 1846
BspANI GGCC 7 cut(s) 322, 634, 652, 860, 909, 947, 1661
BspCNI CTCAG 3 cut(s) 95, 824, 1274
BspFNI CGCG 1 cut(s) 1848
BspLI GGNNCC 3 cut(s) 19, 282, 1776
BspPI GGATC 5 cut(s) 233, 1259, 1409, 1769, 1782
BspTNI GGTCTC 1 cut(s) 85
BsrDI GCAATG 2 cut(s) 528, 1079
BsrFI RCCGGY 1 cut(s) 4
BsrGI TGTACA 1 cut(s) 1294
BsrI ACTGG 7 cut(s) 89, 454, 697, 1000, 1216, 1268, 1361
BssAI RCCGGY 1 cut(s) 4
BssECI CCNNGG 4 cut(s) 647, 752, 861, 1246
BssMI GATC 8 cut(s) 238, 1264, 1405, 1414, 1471, 1527, 1738, 1774
BssSI CACGAG 2 cut(s) 975, 1823
BssT1I CCWWGG 1 cut(s) 647
Bst2BI CACGAG 2 cut(s) 975, 1823
Bst2UI CCWGG 4 cut(s) 285, 552, 753, 1248
Bst4CI ACNGT 6 cut(s) 17, 472, 577, 778, 820, 1730
BstAPI GCANNNNNTGC 1 cut(s) 1577
BstAUI TGTACA 1 cut(s) 1294
BstBAI YACGTR 4 cut(s) 251, 368, 641, 1448
BstC8I GCNNGC 3 cut(s) 6, 1104, 1116
BstDEI CTNAG 6 cut(s) 82, 811, 1261, 1286, 1374, 1534
BstF5I GGATG 4 cut(s) 1510, 1632, 1699, 1864
BstFNI CGCG 1 cut(s) 1848
BstHHI GCGC 3 cut(s) 508, 933, 1850
BstKTI GATC 8 cut(s) 241, 1267, 1408, 1417, 1474, 1530, 1741, 1777
BstMAI GTCTC 2 cut(s) 85, 450
BstMBI GATC 8 cut(s) 238, 1264, 1405, 1414, 1471, 1527, 1738, 1774
BstMWI GCNNNNNNNGC 8 cut(s) 63, 72, 119, 980, 1142, 1154, 1577, 1667
BstNI CCWGG 4 cut(s) 285, 552, 753, 1248
BstNSI RCATGY 1 cut(s) 964
BstSCI CCNGG 4 cut(s) 283, 550, 751, 1246
BstSFI CTRYAG 1 cut(s) 819
BstSNI TACGTA 2 cut(s) 251, 641
BstUI CGCG 1 cut(s) 1848
BstV1I GCAGC 5 cut(s) 106, 658, 958, 1157, 1694
BstX2I RGATCY 3 cut(s) 1264, 1738, 1774
BstYI RGATCY 3 cut(s) 1264, 1738, 1774
BsuI GTATCC 1 cut(s) 565
BsuRI GGCC 7 cut(s) 322, 634, 652, 860, 909, 947, 1661
BtrI CACGTC 1 cut(s) 741
BtsCI GGATG 4 cut(s) 1510, 1632, 1699, 1864
BtsIMutI CAGTG 5 cut(s) 276, 447, 690, 816, 1275
Cac8I GCNNGC 3 cut(s) 6, 1104, 1116
CaiI CAGNNNCTG 1 cut(s) 818
CfoI GCGC 3 cut(s) 508, 933, 1850
Cfr10I RCCGGY 1 cut(s) 4
Cfr13I GGNCC 4 cut(s) 86, 281, 1199, 1828
CsiI ACCWGGT 1 cut(s) 550
Csp6I GTAC 9 cut(s) 13, 127, 252, 638, 642, 802, 1209, 1295, 1378
CspCI CAANNNNNGTGG 2 cut(s) 924, 959
CviAII CATG 6 cut(s) 109, 149, 500, 892, 961, 1045
CviQI GTAC 9 cut(s) 13, 127, 252, 638, 642, 802, 1209, 1295, 1378
DdeI CTNAG 6 cut(s) 82, 811, 1261, 1286, 1374, 1534
DpnI GATC 8 cut(s) 240, 1266, 1407, 1416, 1473, 1529, 1740, 1776
DpnII GATC 8 cut(s) 238, 1264, 1405, 1414, 1471, 1527, 1738, 1774
DraIII CACNNNGTG 1 cut(s) 371
DriI GACNNNNNGTC 1 cut(s) 92
EaeI YGGCCR 4 cut(s) 858, 907, 945, 1659
Eam1105I GACNNNNNGTC 1 cut(s) 92
Ecl136II GAGCTC 1 cut(s) 586
Eco105I TACGTA 2 cut(s) 251, 641
Eco130I CCWWGG 1 cut(s) 647
Eco147I AGGCCT 2 cut(s) 322, 652
Eco24I GRGCYC 1 cut(s) 588
Eco31I GGTCTC 1 cut(s) 85
Eco32I GATATC 2 cut(s) 345, 1130
Eco47I GGWCC 4 cut(s) 86, 281, 1199, 1828
Eco53kI GAGCTC 1 cut(s) 586
Eco57I CTGAAG 4 cut(s) 608, 1003, 1095, 1536
Eco72I CACGTG 2 cut(s) 368, 1448
Eco88I CYCGRG 1 cut(s) 587
EcoICRI GAGCTC 1 cut(s) 586
EcoO109I RGGNCCY 2 cut(s) 281, 1828
EcoRII CCWGG 4 cut(s) 283, 550, 751, 1246
EcoRV GATATC 2 cut(s) 345, 1130
EcoT14I CCWWGG 1 cut(s) 647
EcoT22I ATGCAT 1 cut(s) 1582
EcoT38I GRGCYC 1 cut(s) 588
ErhI CCWWGG 1 cut(s) 647
FaeI CATG 6 cut(s) 112, 152, 503, 895, 964, 1048
FalI AAGNNNNNCTT 4 cut(s) 387, 419, 1517, 1549
FaqI GGGAC 2 cut(s) 294, 751
FatI CATG 6 cut(s) 108, 148, 499, 891, 960, 1044
FauI CCCGC 1 cut(s) 1168
FauNDI CATATG 1 cut(s) 1591
FbaI TGATCA 1 cut(s) 1405
Fnu4HI GCNGC 6 cut(s) 120, 672, 972, 1100, 1146, 1683
FokI GGATG 3 cut(s) 1517, 1639, 1706
FriOI GRGCYC 1 cut(s) 588
Fsp4HI GCNGC 6 cut(s) 120, 672, 972, 1100, 1146, 1683
GlaI GCGC 3 cut(s) 507, 932, 1849
GluI GCNGC 6 cut(s) 120, 672, 972, 1100, 1146, 1683
GsaI CCCAGC 1 cut(s) 225
GsuI CTGGAG 1 cut(s) 135
HaeIII GGCC 7 cut(s) 322, 634, 652, 860, 909, 947, 1661
HapII CCGG 2 cut(s) 5, 1778
HhaI GCGC 3 cut(s) 508, 933, 1850
Hin1II CATG 6 cut(s) 112, 152, 503, 895, 964, 1048
Hin6I GCGC 3 cut(s) 506, 931, 1848
HinP1I GCGC 3 cut(s) 506, 931, 1848
HindIII AAGCTT 2 cut(s) 981, 1547
HinfI GANTC 7 cut(s) 41, 188, 312, 917, 999, 1055, 1394
HpaII CCGG 2 cut(s) 5, 1778
HphI GGTGA 6 cut(s) 176, 244, 362, 443, 449, 1522
Hpy166II GTNNAC 5 cut(s) 13, 235, 644, 1199, 1354
Hpy188I TCNGA 8 cut(s) 46, 258, 489, 627, 814, 1022, 1264, 1476
Hpy8I GTNNAC 5 cut(s) 13, 235, 644, 1199, 1354
Hpy99I CGWCG 3 cut(s) 98, 101, 545
HpyAV CCTTC 7 cut(s) 43, 176, 428, 562, 1356, 1511, 1778
HpyCH4III ACNGT 6 cut(s) 17, 472, 577, 778, 820, 1730
HpyCH4IV ACGT 9 cut(s) 69, 250, 367, 540, 640, 740, 844, 1171, 1447
HpyCH4V TGCA 7 cut(s) 338, 521, 659, 1280, 1459, 1544, 1580
HpyF10VI GCNNNNNNNGC 8 cut(s) 63, 72, 119, 980, 1142, 1154, 1577, 1667
HpyF3I CTNAG 6 cut(s) 82, 811, 1261, 1286, 1374, 1534
HpySE526I ACGT 9 cut(s) 69, 250, 367, 540, 640, 740, 844, 1171, 1447
Hsp92II CATG 6 cut(s) 112, 152, 503, 895, 964, 1048
HspAI GCGC 3 cut(s) 506, 931, 1848
KroI GCCGGC 1 cut(s) 4
KroNI GCCGGC 1 cut(s) 6
Ksp22I TGATCA 1 cut(s) 1405
Kzo9I GATC 8 cut(s) 238, 1264, 1405, 1414, 1471, 1527, 1738, 1774
LmnI GCTCC 2 cut(s) 116, 493
Lsp1109I GCAGC 5 cut(s) 106, 658, 958, 1157, 1694
LweI GCATC 6 cut(s) 508, 668, 700, 1166, 1495, 1620
MabI ACCWGGT 1 cut(s) 550
MaeII ACGT 9 cut(s) 69, 250, 367, 540, 640, 740, 844, 1171, 1447
MaeIII GTNAC 4 cut(s) 1219, 1270, 1709, 1758
MalI GATC 8 cut(s) 240, 1266, 1407, 1416, 1473, 1529, 1740, 1776
MboI GATC 8 cut(s) 238, 1264, 1405, 1414, 1471, 1527, 1738, 1774
MboII GAAGA 3 cut(s) 926, 1478, 1802
MfeI CAATTG 1 cut(s) 884
MflI RGATCY 3 cut(s) 1264, 1738, 1774
MhlI GDGCHC 2 cut(s) 498, 588
MlsI TGGCCA 2 cut(s) 947, 1661
MluNI TGGCCA 2 cut(s) 947, 1661
MlyI GAGTC 2 cut(s) 35, 1403
MmeI TCCRAC 2 cut(s) 124, 1513
Mox20I TGGCCA 2 cut(s) 947, 1661
Mph1103I ATGCAT 1 cut(s) 1582
MroNI GCCGGC 1 cut(s) 4
MroXI GAANNNNTTC 1 cut(s) 171
MscI TGGCCA 2 cut(s) 947, 1661
MseI TTAA 2 cut(s) 1653, 1812
MslI CAYNNNNRTG 1 cut(s) 965
Msp20I TGGCCA 2 cut(s) 947, 1661
MspA1I CMGCKG 2 cut(s) 221, 1685
MspI CCGG 2 cut(s) 5, 1778
MspR9I CCNGG 4 cut(s) 285, 552, 753, 1248
MunI CAATTG 1 cut(s) 884
Mva1269I GAATGC 1 cut(s) 1582
MvaI CCWGG 4 cut(s) 285, 552, 753, 1248
MvnI CGCG 1 cut(s) 1848
MwoI GCNNNNNNNGC 8 cut(s) 63, 72, 119, 980, 1142, 1154, 1577, 1667
NaeI GCCGGC 1 cut(s) 6
NdeI CATATG 1 cut(s) 1591
NdeII GATC 8 cut(s) 238, 1264, 1405, 1414, 1471, 1527, 1738, 1774
NgoMIV GCCGGC 1 cut(s) 4
NlaIII CATG 6 cut(s) 112, 152, 503, 895, 964, 1048
NlaIV GGNNCC 3 cut(s) 19, 282, 1776
NmeAIII GCCGAG 1 cut(s) 886
NmuCI GTSAC 3 cut(s) 1219, 1270, 1758
NsiI ATGCAT 1 cut(s) 1582
NspI RCATGY 1 cut(s) 964
PaeR7I CTCGAG 1 cut(s) 587
PceI AGGCCT 2 cut(s) 322, 652
PctI GAATGC 1 cut(s) 1582
PdiI GCCGGC 1 cut(s) 6
PdmI GAANNNNTTC 1 cut(s) 171
PfeI GAWTC 5 cut(s) 188, 312, 917, 999, 1055
PkrI GCNGC 6 cut(s) 121, 673, 973, 1101, 1147, 1684
PleI GAGTC 2 cut(s) 35, 1402
PmaCI CACGTG 2 cut(s) 368, 1448
PmlI CACGTG 2 cut(s) 368, 1448
PpsI GAGTC 2 cut(s) 35, 1402
Ppu21I YACGTR 4 cut(s) 251, 368, 641, 1448
PpuMI RGGWCCY 2 cut(s) 281, 1828
Psp124BI GAGCTC 1 cut(s) 588
Psp5II RGGWCCY 2 cut(s) 281, 1828
Psp6I CCWGG 4 cut(s) 283, 550, 751, 1246
PspCI CACGTG 2 cut(s) 368, 1448
PspFI CCCAGC 1 cut(s) 221
PspGI CCWGG 4 cut(s) 283, 550, 751, 1246
PspN4I GGNNCC 3 cut(s) 19, 282, 1776
PspPI GGNCC 4 cut(s) 86, 281, 1199, 1828
PspPPI RGGWCCY 2 cut(s) 281, 1828
PspXI VCTCGAGB 1 cut(s) 587
PstNI CAGNNNCTG 1 cut(s) 818
PsuI RGATCY 3 cut(s) 1264, 1738, 1774
PvuII CAGCTG 2 cut(s) 221, 1685
RsaI GTAC 9 cut(s) 14, 128, 253, 639, 643, 803, 1210, 1296, 1379
RsaNI GTAC 9 cut(s) 13, 127, 252, 638, 642, 802, 1209, 1295, 1378
RseI CAYNNNNRTG 1 cut(s) 965
SacI GAGCTC 1 cut(s) 588
SaqAI TTAA 2 cut(s) 1653, 1812
SatI GCNGC 6 cut(s) 120, 672, 972, 1100, 1146, 1683
Sau3AI GATC 8 cut(s) 238, 1264, 1405, 1414, 1471, 1527, 1738, 1774
Sau96I GGNCC 4 cut(s) 86, 281, 1199, 1828
ScaI AGTACT 2 cut(s) 803, 1379
SchI GAGTC 2 cut(s) 35, 1403
ScrFI CCNGG 4 cut(s) 285, 552, 753, 1248
SduI GDGCHC 2 cut(s) 498, 588
SexAI ACCWGGT 1 cut(s) 550
SfaNI GCATC 6 cut(s) 508, 668, 700, 1166, 1495, 1620
SfcI CTRYAG 1 cut(s) 819
Sfr274I CTCGAG 1 cut(s) 587
SinI GGWCC 4 cut(s) 86, 281, 1199, 1828
SlaI CTCGAG 1 cut(s) 587
SmiMI CAYNNNNRTG 1 cut(s) 965
SmlI CTYRAG 2 cut(s) 587, 1853
SmoI CTYRAG 2 cut(s) 587, 1853
SnaBI TACGTA 2 cut(s) 251, 641
SseBI AGGCCT 2 cut(s) 322, 652
SsiI CCGC 7 cut(s) 8, 73, 1099, 1175, 1633, 1750, 1846
SspI AATATT 3 cut(s) 291, 301, 560
SstI GAGCTC 1 cut(s) 588
StuI AGGCCT 2 cut(s) 322, 652
StyD4I CCNGG 4 cut(s) 283, 550, 751, 1246
StyI CCWWGG 1 cut(s) 647
TaaI ACNGT 6 cut(s) 17, 472, 577, 778, 820, 1730
TaiI ACGT 9 cut(s) 72, 253, 370, 543, 643, 743, 847, 1174, 1450
TaqI TCGA 2 cut(s) 588, 1066
TatI WGTACW 3 cut(s) 801, 1294, 1377
TauI GCSGC 1 cut(s) 1102
TfiI GAWTC 5 cut(s) 188, 312, 917, 999, 1055
Tru1I TTAA 2 cut(s) 1653, 1812
Tru9I TTAA 2 cut(s) 1653, 1812
TscAI CASTG 5 cut(s) 276, 454, 697, 823, 1275
TseFI GTSAC 3 cut(s) 1219, 1270, 1758
TseI GCWGC 5 cut(s) 119, 671, 971, 1145, 1682
Tsp45I GTSAC 3 cut(s) 1219, 1270, 1758
TspDTI ATGAA 6 cut(s) 552, 867, 941, 1182, 1494, 1634
TspGWI ACGGA 1 cut(s) 324
TspRI CASTG 5 cut(s) 276, 454, 697, 823, 1275
VpaK11BI GGWCC 4 cut(s) 86, 281, 1199, 1828
XapI RAATTY 4 cut(s) 611, 1598, 1766, 1808
XceI RCATGY 1 cut(s) 964
XhoI CTCGAG 1 cut(s) 587
XmnI GAANNNNTTC 1 cut(s) 171
ZrmI AGTACT 2 cut(s) 803, 1379
Zsp2I ATGCAT 1 cut(s) 1582
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.