Rh2AG472600

V-type proton ATPase catalytic subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0008079
Physical Location & Seq
Forward (+)
69198507 .. 69204298
5792 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG472600.1

Sequence Viewer

Length: 1764 bp
ATGGGTGGGGCTGCCATGTACGAGCTGGTTCGTGTTGGAAATGATAATTTGATTGGTGAAATTATTCGATTAGAAGGAGATTCTGCCACAATCCAAGTTTATGAGGAGACAGCTGGGTTGATGGTGAATGATCCTGTTCTACGTACACGCAAGCCTTTATCAGTGGAGCTGGGACCTGGAATTTTGGGAAATATTTTTGATGGGATCCAGAGACCTTTGAAAACTATTGCAAAAATATCTGGTGATGTCTATATCCCACGTGGTGTGTCTGTCCCAGCTCTTGACAAGGATATACTTTGGGAGTTTCAACCTAAAAAAATAGGTGAAGGTGATCATATAACTGGTGGAGACTTGTATGCTACTGTATTTGAAAATACTCTGATGCAGCACCATATGGCGCTTCCTCCTGATGCTATGGGAAAAGTTACATACGTTGCACCAGCTGGTCAATATTCATTGAAGGATACTGTGTTGGAGCTTGAGTTTCAAGGTGTCAAAAAGCAATTTACTATGCTTCAGAGTTGGCCTGTACGTACACCAAGGCCTGTCGCATCAAAGCTTGCTGCCGATACCCCTTTGCTTACTGGGCAGCGTGTTCTTGATGCCCTTTTCCCCTCTGTTCTCGGTGGAACTTGTGCCATTCCTGGAGCATTTGGTTGTGGAAAAACAGTCATTAGTCAAGCTCTTTCCAAGTATTCTAACTCAGACACTGTGGTTTATGTTGGTTGTGGAGAACGAGGAAATGAAATGGCTGAGGTTCTTATGGATTTTCCTCAACTGACAATGACTTTACCTGATGGTCGTGAAGAATCTGTCATGAAGCGAACAACACTGGTCGCCAACACTTCTAACATGCCTGTGGCTGCTCGTGAAGCTTCAATCTATACTGGAATCACTATTGCTGAATACTTCAGAGATATGGGATACAATGTTAGTATGATGGCAGATTCAACATCTCGATGGGCAGAAGCATTGCGTGAAATTTCTGGGCGGCTGGCAGAAATGCCTGCAGATAGTGGATATCCTGCTTATTTGGCAGCACGTTTAGCATCGTTTTATGAACGTGCCGGTAAAGTAAAATGTCTTGGTGGACCAGAGCGTACTGGTAGTGTGACTATTGTTGGTGCTGTTTCACCCCCTGGAGGAGATTTCTCAGATCCTGTGACATCTGCAACCCTCAGTATTGTCCAGGTTTTCTGGGGTCTGGACAAGAAACTTGCTCAGAGGAAGCATTTCCCTTCTGTGAACTGGCTTATTTCGTACTCCAAGTATTCAACGGCATTAGAGTCTTTCTATGATAAATTTGATTCCGACTTTATCAACATCAGGACAAAGGCACGTGAGGTGTTGCAAAGAGAAGATGATCTGAATGAAATTGTCCAACTTGTAGGAAAGGATGCTTTAGCTGAAGGAGACAAGATCACCTTAGAAACTGCAAAGCTGTTGAGGGAGGATTATCTCGCACAGAATGCATTTACTCCATATGATAAATTCTGCCCCTTGTACAAGTCTGTTTGGATGATGCGGAATATCATCCATTTCTTTAATTTGGCAAATCAGGCAGTAGAGAGAGCAGCTGGTATGGATGGTCAAAAGATTAATTACAGTCTAATCAAGCACCGTATGGGAGATCTCTTTTACCGGCTAGTGTCTCAAAAATTTGAGGATCCTGCTGAAGGTGAACAAGCGCTTGTGGCAAAATTTAAAAAGCTTCATGAAGACTTAACGAACGGTTTCCGTGCTCTTGAGGATGAAACTCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000325 GO:0002020 GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006970 GO:0006996 GO:0007030 GO:0007275 GO:0008150 GO:0008324 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009555 GO:0009628 GO:0009651 GO:0009941 GO:0009987 GO:0010256 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015672 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0019899 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030054 GO:0030312 GO:0031090 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0034220 GO:0036442 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044769 GO:0046961 GO:0048046 GO:0048229 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071840 GO:0071944 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:0099131 GO:0099132 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04145 ko04150 ko04721 ko04966 ko05110 ko05120 ko05323 map00190 map01100 map04145 map04150 map04721 map04966 map05110 map05120 map05323
Pfam Domains
Protein Families
ATP-synt_ab ATP-synt_ab_N ATP-synt_ab_Xtn

Protein Analysis

587

Amino Acids

64.81

Weight (kDa)

5.54

Isoelectric Point (pI)

29.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP-synt_ab_N PF02874 4 - 49 2.1e-10 ATP synthase alpha/beta family, beta-barrel domain
ATP-synt_ab_Xtn PF16886 91 - 178 7.3e-28 ATPsynthase alpha/beta subunit barrel-sandwich domain
ATP-synt_ab PF00006 196 - 422 1.1e-74 ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_VA_C PF22919 430 - 524 1.7e-28 C-terminal domain of V and A type ATP synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 991, 1525
AclWI GGATC 6 cut(s) 125, 199, 212, 1151, 1661, 1674
AcsI RAATTY 6 cut(s) 180, 981, 1301, 1490, 1658, 1700
AcuI CTGAAG 4 cut(s) 500, 895, 1428, 1695
AcvI CACGTG 2 cut(s) 260, 1340
AdeI CACNNNGTG 1 cut(s) 263
AfaI GTAC 7 cut(s) 20, 145, 531, 535, 1102, 1262, 1505
AfeI AGCGCT 1 cut(s) 1689
AfiI CCNNNNNNNGG 2 cut(s) 1142, 1676
AgsI TTSAA 8 cut(s) 220, 308, 371, 460, 488, 879, 951, 1275
AjnI CCWGG 4 cut(s) 175, 643, 1138, 1188
Alw21I GWGCWC 1 cut(s) 1744
Alw26I GTCTC 5 cut(s) 101, 205, 342, 1407, 1656
AlwI GGATC 6 cut(s) 125, 199, 212, 1151, 1661, 1674
AlwNI CAGNNNCTG 2 cut(s) 710, 1160
Aor51HI AGCGCT 1 cut(s) 1689
AoxI GGCC 2 cut(s) 524, 542
ApeKI GCWGC 7 cut(s) 11, 385, 563, 589, 863, 1037, 1574
ApoI RAATTY 6 cut(s) 180, 981, 1301, 1490, 1658, 1700
AseI ATTAAT 1 cut(s) 1599
Asp700I GAANNNNTTC 3 cut(s) 63, 1232, 1733
AspLEI GCGC 2 cut(s) 400, 1690
AspS9I GGNCC 2 cut(s) 173, 1091
AsuHPI GGTGA 8 cut(s) 68, 136, 254, 335, 341, 1125, 1414, 1691
AvaII GGWCC 2 cut(s) 173, 1091
BamHI GGATCC 2 cut(s) 204, 1666
BauI CACGAG 1 cut(s) 867
BbrPI CACGTG 2 cut(s) 260, 1340
BbsI GAAGAC 1 cut(s) 1725
Bbv12I GWGCWC 1 cut(s) 1744
BbvCI CCTCAGC 1 cut(s) 753
BbvI GCAGC 6 cut(s) 397, 550, 601, 850, 1049, 1586
BccI CCATC 6 cut(s) 115, 194, 791, 934, 954, 1580
BceAI ACGGC 1 cut(s) 1293
BciT130I CCWGG 4 cut(s) 177, 645, 1140, 1190
BciVI GTATCC 2 cut(s) 457, 917
BclI TGATCA 1 cut(s) 331
BcoDI GTCTC 5 cut(s) 101, 205, 342, 1407, 1656
BfaI CTAG 1 cut(s) 1646
BfmI CTRYAG 1 cut(s) 1008
BfoI RGCGCY 2 cut(s) 401, 1691
BfuI GTATCC 2 cut(s) 457, 917
BglII AGATCT 1 cut(s) 1630
BisI GCNGC 8 cut(s) 12, 386, 564, 590, 864, 992, 1038, 1575
BlsI GCNGC 8 cut(s) 13, 387, 565, 591, 865, 993, 1039, 1576
Bme1390I CCNGG 4 cut(s) 177, 645, 1140, 1190
Bme18I GGWCC 2 cut(s) 173, 1091
BmgT120I GGNCC 2 cut(s) 173, 1091
BmiI GGNNCC 3 cut(s) 174, 206, 1668
BmrFI CCNGG 4 cut(s) 177, 645, 1140, 1190
BmrI ACTGGG 1 cut(s) 594
BmsI GCATC 7 cut(s) 372, 400, 560, 592, 1058, 1387, 1512
BmuI ACTGGG 1 cut(s) 594
BpiI GAAGAC 1 cut(s) 1725
BpmI CTGGAG 2 cut(s) 666, 1161
Bpu10I CCTNAGC 1 cut(s) 753
BpuEI CTTGAG 1 cut(s) 500
BsaAI YACGTR 4 cut(s) 143, 260, 533, 1340
BsaI GGTCTC 1 cut(s) 205
BsaJI CCNNGG 2 cut(s) 539, 1138
BsaXI ACNNNNNCTCC 2 cut(s) 467, 497
Bsc4I CCNNNNNNNGG 2 cut(s) 1142, 1676
Bse118I RCCGGY 2 cut(s) 1067, 1641
Bse1I ACTGG 6 cut(s) 346, 589, 837, 892, 1108, 1253
Bse3DI GCAATG 1 cut(s) 971
BseBI CCWGG 4 cut(s) 177, 645, 1140, 1190
BseDI CCNNGG 2 cut(s) 539, 1138
BseGI GGATG 5 cut(s) 1402, 1524, 1533, 1591, 1756
BseLI CCNNNNNNNGG 2 cut(s) 1142, 1676
BseMI GCAATG 1 cut(s) 971
BseMII CTCAG 5 cut(s) 717, 744, 1167, 1192, 1235
BseNI ACTGG 6 cut(s) 346, 589, 837, 892, 1108, 1253
BseRI GAGGAG 2 cut(s) 119, 1158
BseXI GCAGC 6 cut(s) 397, 550, 601, 850, 1049, 1586
BseYI CCCAGC 3 cut(s) 113, 169, 274
BshFI GGCC 2 cut(s) 526, 544
BsiHKAI GWGCWC 1 cut(s) 1744
BsiSI CCGG 2 cut(s) 1068, 1642
BslFI GGGAC 2 cut(s) 186, 257
BslI CCNNNNNNNGG 2 cut(s) 1142, 1676
BsmAI GTCTC 5 cut(s) 101, 205, 342, 1407, 1656
BsmFI GGGAC 2 cut(s) 186, 257
BsmI GAATGC 1 cut(s) 1474
BsnI GGCC 2 cut(s) 526, 544
Bso31I GGTCTC 1 cut(s) 205
Bsp1286I GDGCHC 1 cut(s) 1744
Bsp1407I TGTACA 1 cut(s) 1503
Bsp143I GATC 8 cut(s) 130, 204, 331, 1156, 1363, 1419, 1630, 1666
BspACI CCGC 2 cut(s) 991, 1525
BspANI GGCC 2 cut(s) 526, 544
BspCNI CTCAG 5 cut(s) 716, 745, 1166, 1191, 1234
BspHI TCATGA 2 cut(s) 816, 1714
BspLI GGNNCC 3 cut(s) 174, 206, 1668
BspMAI CTGCAG 1 cut(s) 1012
BspPI GGATC 6 cut(s) 125, 199, 212, 1151, 1661, 1674
BspTNI GGTCTC 1 cut(s) 205
BsrDI GCAATG 1 cut(s) 971
BsrFI RCCGGY 2 cut(s) 1067, 1641
BsrGI TGTACA 1 cut(s) 1503
BsrI ACTGG 6 cut(s) 346, 589, 837, 892, 1108, 1253
BssAI RCCGGY 2 cut(s) 1067, 1641
BssECI CCNNGG 2 cut(s) 539, 1138
BssMI GATC 8 cut(s) 130, 204, 331, 1156, 1363, 1419, 1630, 1666
BssSI CACGAG 1 cut(s) 867
BssT1I CCWWGG 1 cut(s) 539
Bst2BI CACGAG 1 cut(s) 867
Bst2UI CCWGG 4 cut(s) 177, 645, 1140, 1190
Bst4CI ACNGT 7 cut(s) 364, 469, 670, 712, 1607, 1622, 1733
BstAPI GCANNNNNTGC 1 cut(s) 1469
BstAUI TGTACA 1 cut(s) 1503
BstBAI YACGTR 4 cut(s) 143, 260, 533, 1340
BstC8I GCNNGC 4 cut(s) 152, 561, 996, 1008
BstDEI CTNAG 6 cut(s) 703, 753, 1153, 1178, 1221, 1426
BstENI CCTNNNNNAGG 1 cut(s) 1674
BstF5I GGATG 5 cut(s) 1402, 1524, 1533, 1591, 1756
BstH2I RGCGCY 2 cut(s) 401, 1691
BstHHI GCGC 2 cut(s) 400, 1690
BstKTI GATC 8 cut(s) 133, 207, 334, 1159, 1366, 1422, 1633, 1669
BstMAI GTCTC 5 cut(s) 101, 205, 342, 1407, 1656
BstMBI GATC 8 cut(s) 130, 204, 331, 1156, 1363, 1419, 1630, 1666
BstMWI GCNNNNNNNGC 7 cut(s) 586, 872, 1034, 1046, 1469, 1559, 1694
BstNI CCWGG 4 cut(s) 177, 645, 1140, 1190
BstNSI RCATGY 1 cut(s) 856
BstSCI CCNGG 4 cut(s) 175, 643, 1138, 1188
BstSFI CTRYAG 1 cut(s) 1008
BstSNI TACGTA 2 cut(s) 143, 533
BstV1I GCAGC 6 cut(s) 397, 550, 601, 850, 1049, 1586
BstV2I GAAGAC 1 cut(s) 1725
BstX2I RGATCY 4 cut(s) 204, 1156, 1630, 1666
BstYI RGATCY 4 cut(s) 204, 1156, 1630, 1666
BsuI GTATCC 2 cut(s) 457, 917
BsuRI GGCC 2 cut(s) 526, 544
BtsCI GGATG 5 cut(s) 1402, 1524, 1533, 1591, 1756
BtsIMutI CAGTG 3 cut(s) 168, 708, 830
Cac8I GCNNGC 4 cut(s) 152, 561, 996, 1008
CaiI CAGNNNCTG 2 cut(s) 710, 1160
CciI TCATGA 2 cut(s) 816, 1714
CfoI GCGC 2 cut(s) 400, 1690
Cfr10I RCCGGY 2 cut(s) 1067, 1641
Cfr13I GGNCC 2 cut(s) 173, 1091
Csp6I GTAC 7 cut(s) 19, 144, 530, 534, 1101, 1261, 1504
CviAII CATG 4 cut(s) 16, 817, 853, 1715
CviQI GTAC 7 cut(s) 19, 144, 530, 534, 1101, 1261, 1504
DdeI CTNAG 6 cut(s) 703, 753, 1153, 1178, 1221, 1426
DpnI GATC 8 cut(s) 132, 206, 333, 1158, 1365, 1421, 1632, 1668
DpnII GATC 8 cut(s) 130, 204, 331, 1156, 1363, 1419, 1630, 1666
DraI TTTAAA 1 cut(s) 1705
DraIII CACNNNGTG 1 cut(s) 263
Eco105I TACGTA 2 cut(s) 143, 533
Eco130I CCWWGG 1 cut(s) 539
Eco147I AGGCCT 1 cut(s) 544
Eco31I GGTCTC 1 cut(s) 205
Eco32I GATATC 1 cut(s) 1022
Eco47I GGWCC 2 cut(s) 173, 1091
Eco47III AGCGCT 1 cut(s) 1689
Eco57I CTGAAG 4 cut(s) 500, 895, 1428, 1695
Eco72I CACGTG 2 cut(s) 260, 1340
EcoNI CCTNNNNNAGG 1 cut(s) 1674
EcoO109I RGGNCCY 1 cut(s) 173
EcoRII CCWGG 4 cut(s) 175, 643, 1138, 1188
EcoRV GATATC 1 cut(s) 1022
EcoT14I CCWWGG 1 cut(s) 539
EcoT22I ATGCAT 1 cut(s) 1474
ErhI CCWWGG 1 cut(s) 539
FaeI CATG 4 cut(s) 19, 820, 856, 1718
FalI AAGNNNNNCTT 2 cut(s) 1409, 1441
FaqI GGGAC 2 cut(s) 186, 257
FatI CATG 4 cut(s) 15, 816, 852, 1714
FauNDI CATATG 2 cut(s) 393, 1483
FbaI TGATCA 1 cut(s) 331
Fnu4HI GCNGC 8 cut(s) 12, 386, 564, 590, 864, 992, 1038, 1575
FokI GGATG 4 cut(s) 1409, 1520, 1531, 1598
Fsp4HI GCNGC 8 cut(s) 12, 386, 564, 590, 864, 992, 1038, 1575
FspBI CTAG 1 cut(s) 1646
GlaI GCGC 2 cut(s) 399, 1689
GluI GCNGC 8 cut(s) 12, 386, 564, 590, 864, 992, 1038, 1575
GsaI CCCAGC 3 cut(s) 117, 173, 278
GsuI CTGGAG 2 cut(s) 666, 1161
HaeII RGCGCY 2 cut(s) 401, 1691
HaeIII GGCC 2 cut(s) 526, 544
HapII CCGG 2 cut(s) 1068, 1642
HhaI GCGC 2 cut(s) 400, 1690
Hin1II CATG 4 cut(s) 19, 820, 856, 1718
Hin6I GCGC 2 cut(s) 398, 1688
HinP1I GCGC 2 cut(s) 398, 1688
HindIII AAGCTT 3 cut(s) 557, 873, 1709
HinfI GANTC 6 cut(s) 80, 809, 891, 947, 1286, 1307
HpaII CCGG 2 cut(s) 1068, 1642
HphI GGTGA 8 cut(s) 68, 136, 254, 335, 341, 1125, 1414, 1691
Hpy166II GTNNAC 5 cut(s) 146, 536, 1091, 1246, 1682
Hpy188I TCNGA 8 cut(s) 381, 519, 706, 914, 1156, 1224, 1312, 1368
Hpy8I GTNNAC 5 cut(s) 146, 536, 1091, 1246, 1682
HpyAV CCTTC 6 cut(s) 68, 320, 454, 1248, 1403, 1670
HpyCH4III ACNGT 7 cut(s) 364, 469, 670, 712, 1607, 1622, 1733
HpyCH4IV ACGT 7 cut(s) 142, 259, 432, 532, 1042, 1063, 1339
HpyCH4V TGCA 8 cut(s) 230, 385, 437, 1010, 1172, 1351, 1436, 1472
HpyF10VI GCNNNNNNNGC 7 cut(s) 586, 872, 1034, 1046, 1469, 1559, 1694
HpyF3I CTNAG 6 cut(s) 703, 753, 1153, 1178, 1221, 1426
HpySE526I ACGT 7 cut(s) 142, 259, 432, 532, 1042, 1063, 1339
Hsp92II CATG 4 cut(s) 19, 820, 856, 1718
HspAI GCGC 2 cut(s) 398, 1688
Ksp22I TGATCA 1 cut(s) 331
Kzo9I GATC 8 cut(s) 130, 204, 331, 1156, 1363, 1419, 1630, 1666
LmnI GCTCC 3 cut(s) 166, 475, 647
Lsp1109I GCAGC 6 cut(s) 397, 550, 601, 850, 1049, 1586
LweI GCATC 7 cut(s) 372, 400, 560, 592, 1058, 1387, 1512
MaeI CTAG 1 cut(s) 1646
MaeII ACGT 7 cut(s) 142, 259, 432, 532, 1042, 1063, 1339
MaeIII GTNAC 3 cut(s) 424, 1111, 1162
MalI GATC 8 cut(s) 132, 206, 333, 1158, 1365, 1421, 1632, 1668
MboI GATC 8 cut(s) 130, 204, 331, 1156, 1363, 1419, 1630, 1666
MboII GAAGA 3 cut(s) 818, 1370, 1730
MflI RGATCY 4 cut(s) 204, 1156, 1630, 1666
MhlI GDGCHC 1 cut(s) 1744
MlyI GAGTC 1 cut(s) 1295
MmeI TCCRAC 4 cut(s) 16, 453, 1335, 1405
Mph1103I ATGCAT 1 cut(s) 1474
MroXI GAANNNNTTC 3 cut(s) 63, 1232, 1733
MseI TTAA 4 cut(s) 1545, 1599, 1704, 1724
MslI CAYNNNNRTG 2 cut(s) 857, 958
MspA1I CMGCKG 3 cut(s) 113, 443, 1577
MspI CCGG 2 cut(s) 1068, 1642
MspR9I CCNGG 4 cut(s) 177, 645, 1140, 1190
Mva1269I GAATGC 1 cut(s) 1474
MvaI CCWGG 4 cut(s) 177, 645, 1140, 1190
MwoI GCNNNNNNNGC 7 cut(s) 586, 872, 1034, 1046, 1469, 1559, 1694
NdeI CATATG 2 cut(s) 393, 1483
NdeII GATC 8 cut(s) 130, 204, 331, 1156, 1363, 1419, 1630, 1666
NlaIII CATG 4 cut(s) 19, 820, 856, 1718
NlaIV GGNNCC 3 cut(s) 174, 206, 1668
NmuCI GTSAC 2 cut(s) 1111, 1162
NsiI ATGCAT 1 cut(s) 1474
NspI RCATGY 1 cut(s) 856
PagI TCATGA 2 cut(s) 816, 1714
PceI AGGCCT 1 cut(s) 544
PctI GAATGC 1 cut(s) 1474
PdmI GAANNNNTTC 3 cut(s) 63, 1232, 1733
PfeI GAWTC 5 cut(s) 80, 809, 891, 947, 1307
PfoI TCCNGGA 1 cut(s) 643
PkrI GCNGC 8 cut(s) 13, 387, 565, 591, 865, 993, 1039, 1576
PleI GAGTC 1 cut(s) 1294
PmaCI CACGTG 2 cut(s) 260, 1340
PmlI CACGTG 2 cut(s) 260, 1340
PpsI GAGTC 1 cut(s) 1294
Ppu21I YACGTR 4 cut(s) 143, 260, 533, 1340
PpuMI RGGWCCY 1 cut(s) 173
PshBI ATTAAT 1 cut(s) 1599
Psp5II RGGWCCY 1 cut(s) 173
Psp6I CCWGG 4 cut(s) 175, 643, 1138, 1188
PspCI CACGTG 2 cut(s) 260, 1340
PspFI CCCAGC 3 cut(s) 113, 169, 274
PspGI CCWGG 4 cut(s) 175, 643, 1138, 1188
PspN4I GGNNCC 3 cut(s) 174, 206, 1668
PspPI GGNCC 2 cut(s) 173, 1091
PspPPI RGGWCCY 1 cut(s) 173
PstI CTGCAG 1 cut(s) 1012
PstNI CAGNNNCTG 2 cut(s) 710, 1160
PsuI RGATCY 4 cut(s) 204, 1156, 1630, 1666
PvuII CAGCTG 3 cut(s) 113, 443, 1577
RsaI GTAC 7 cut(s) 20, 145, 531, 535, 1102, 1262, 1505
RsaNI GTAC 7 cut(s) 19, 144, 530, 534, 1101, 1261, 1504
RseI CAYNNNNRTG 2 cut(s) 857, 958
SaqAI TTAA 4 cut(s) 1545, 1599, 1704, 1724
SatI GCNGC 8 cut(s) 12, 386, 564, 590, 864, 992, 1038, 1575
Sau3AI GATC 8 cut(s) 130, 204, 331, 1156, 1363, 1419, 1630, 1666
Sau96I GGNCC 2 cut(s) 173, 1091
SchI GAGTC 1 cut(s) 1295
ScrFI CCNGG 4 cut(s) 177, 645, 1140, 1190
SduI GDGCHC 1 cut(s) 1744
SfaNI GCATC 7 cut(s) 372, 400, 560, 592, 1058, 1387, 1512
SfcI CTRYAG 1 cut(s) 1008
SinI GGWCC 2 cut(s) 173, 1091
SmiMI CAYNNNNRTG 2 cut(s) 857, 958
SmlI CTYRAG 2 cut(s) 479, 1745
SmoI CTYRAG 2 cut(s) 479, 1745
SnaBI TACGTA 2 cut(s) 143, 533
SseBI AGGCCT 1 cut(s) 544
SsiI CCGC 2 cut(s) 991, 1525
SspI AATATT 2 cut(s) 193, 452
SspMI CTAG 1 cut(s) 1646
StuI AGGCCT 1 cut(s) 544
StyD4I CCNGG 4 cut(s) 175, 643, 1138, 1188
StyI CCWWGG 1 cut(s) 539
TaaI ACNGT 7 cut(s) 364, 469, 670, 712, 1607, 1622, 1733
TaiI ACGT 7 cut(s) 145, 262, 435, 535, 1045, 1066, 1342
TaqI TCGA 3 cut(s) 67, 958, 1759
TatI WGTACW 1 cut(s) 1503
TauI GCSGC 1 cut(s) 994
TfiI GAWTC 5 cut(s) 80, 809, 891, 947, 1307
Tru1I TTAA 4 cut(s) 1545, 1599, 1704, 1724
Tru9I TTAA 4 cut(s) 1545, 1599, 1704, 1724
TscAI CASTG 3 cut(s) 168, 715, 837
TseFI GTSAC 2 cut(s) 1111, 1162
TseI GCWGC 7 cut(s) 11, 385, 563, 589, 863, 1037, 1574
Tsp45I GTSAC 2 cut(s) 1111, 1162
TspDTI ATGAA 7 cut(s) 444, 759, 833, 1074, 1386, 1703, 1731
TspGWI ACGGA 1 cut(s) 1727
TspRI CASTG 3 cut(s) 168, 715, 837
VpaK11BI GGWCC 2 cut(s) 173, 1091
VspI ATTAAT 1 cut(s) 1599
XagI CCTNNNNNAGG 1 cut(s) 1674
XapI RAATTY 6 cut(s) 180, 981, 1301, 1490, 1658, 1700
XceI RCATGY 1 cut(s) 856
XcmI CCANNNNNNNNNTGG 1 cut(s) 22
XmnI GAANNNNTTC 3 cut(s) 63, 1232, 1733
XspI CTAG 1 cut(s) 1646
Zsp2I ATGCAT 1 cut(s) 1474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.