Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0004865

Physical Location & Seq

Genomic Coordinates Forward (+)

2838809 .. 2840892

Gene Structure 2084 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G039300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGATGGAATCCATTTCTTGGGTTGCATACGCTGCCGCATGGCTGGGAGCACTCGTTCTCATCCTCCTCTCCCGCCGCCTCCGCCACCGCAAGCTCAATTTGCCGCCCGGTCCAAAACCCTGGCCCATCATTGGAAACCTCAACCTCATAAGCCAACTTCCCCACCGGTCTATCCATGCACTCGCCCAAAAATATGGGCCCATCATGCAGCTCAAGTTTGGGTCCCACCCGGTCGTCGTGGGCTCTTCGGTTGACATGGCTAAGGCCTTCCTGAAAACCCACGACGTTACCTTCGCCGGACGACCCAAATTCGCAGCCGGTAAGCACACCACATACAACTACTCGGACATTACTTGGTCCCCTTACGGTCCATATTGGCGCCAGGCCCGTAAAATGTGCGTAATGGAGCTTTTCAGTGCCAGACGCTTAGAATCATATGAATATATCAGAAAGGAGGAAATGAACGCATTGCTCAGAGGCTTATTTGAGTCCTCCAACACCAACATTTTGCTGAAAGATCACCTTTCAACTGTGAGTCTTAATGTTATAAGCCGCATGGTGCTCGGAAAGAAGTACACGGACGAGTCGGAAGACTCGATCGTGAGCCCCGATGAGTTCAAGAAGATGTTGGATGAGCTCTTCTTGCTGAGCGGGGTGTTGAATATTGGTGACTCAATACCGTGGCTTGATTTCTTGGACTTGCAAGGGTACATAAAGAGAATGAAGACTTTGAGCAAGAAGTTGGATAGGTTCTTGGAGCATGTGTTGGATGTACATATTGCAAAGAGGAAGGCAGGTGGTGAAGACTTTGTTGCAAAAGATATGGTTGATGTGCTTCTGCAACTTGCTGATGATCCTAACCTTGAAGTTAAGCTTGAAAGACATGGAGTCAAGGCCTTTACCCAGGATCTAATTGCCGGTGGAACTGAGAGCTCAGCGGTGACCGTCGAATGGGCAATTTCAGAGCTGCTAAGGAAGCCGGAGGTTTTCAAGAAGGCAACAGAGGAGCTAGACAGGGTGATTGGAAGAGAGAGATGGGTTGAAGAGAATGACATTGTCAACTTACCCTATGTTGATGCCATTGCCAAGGAAACCATGAGGCTGCACCCAGTGGCACCCATGTTGGTGCCAAGACTAGCCCGAGAAGACTGCCAAGTTGCTGGCTATGACATCCCCAAGGGCACCAGAATCCTAGTAAGTGTCTGGACCATAGGAAGAGACCCTCAACTTTGGGACAGCCCAGAAGAGTTTTGCCCTGAGAGGTTCCTTGGCAAGGACATTGATGTCAAAGGCCAGGACTTTGAGCTGCTCCCATTTGGGTCAGGCAGGAGGATGTGCCCTGGCTACAGCCTTGGCATCAAGGTGATCCAGGCAAGCCTGGCCAATCTCCTACACGGGTTTACATGGAGATTGCCCGACAACTTGAAGGAGGAGGATTTGAACATGGAGGAAATTTTTGGGCTTTCAACTCCAAAGAAGTATCCTCTTGTTGCAGTCTGTGAACCTCGTCTTCCACCTCACGTTTACTCAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0012505 GO:0016020 GO:0031090 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko00905 ko01100 ko01110 map00905 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

512

Amino Acids

58.05

Weight (kDa)

7.22

Isoelectric Point (pI)

38.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004865)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g34910 FvH4_6g34950
malus_domestica	MD09G1181200.v1.1 MD17G1167200.v1.1
prunus_persica	Prupe.3G039300_v2.0.a1
pyrus_communis	pycom09g09890 pycom17g15910
rosa_chinensis	RchiOBHm_Chr2g0145811 RchiOBHm_Chr2g0145921
rosa_laevigata	RLG00000020169 RLG00000020170 RLG00000020171 RLG00000020176
rosa_multiflora	Rmu_sc0001702.1_g000001 Rmu_sc0001702.1_g000002 Rmu_sc0001702.1_g000024
rosa_roxburghii	Rroxscaffold_152G00434770 Rroxscaffold_152G00434780 Rroxscaffold_152G00434800 Rroxscaffold_2G00100360 Rroxscaffold_2G00100420 Rroxscaffold_2G00100430
rosa_rugosa	Rorug02G0393400 Rorug02G0393500
rosa_samantha	Rh2AG448500 Rh2BG460200 Rh2BG460600 Rh2CG435500 Rh2DG470000
rosa_wichuraiana	Rw2G036590 Rw2G036630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	548
AarI	CACCTGC	1 cut(s)	785
AasI	GACNNNNNNGTC	1 cut(s)	1283
Acc36I	ACCTGC	1 cut(s)	785
AccB1I	GGYRCC	4 cut(s)	378, 1114, 1126, 1181
AccB7I	CCANNNNNTGG	1 cut(s)	18
AccBSI	CCGCTC	1 cut(s)	651
AciI	CCGC	9 cut(s)	36, 73, 76, 82, 88, 104, 553, 651, 938
AclWI	GGATC	3 cut(s)	848, 915, 1360
AcoI	YGGCCR	1 cut(s)	1380
AcsI	RAATTY	2 cut(s)	308, 1452
AcyI	GRCGYC	1 cut(s)	379
AdeI	CACNNNGTG	1 cut(s)	1111
AfaI	GTAC	3 cut(s)	575, 710, 774
AfiI	CCNNNNNNNGG	4 cut(s)	18, 131, 951, 1273
AgeI	ACCGGT	1 cut(s)	165
AhdI	GACNNNNNGTC	1 cut(s)	887
AjnI	CCWGG	7 cut(s)	119, 381, 903, 1293, 1339, 1368, 1377
AloI	GAACNNNNNNTCC	2 cut(s)	39, 71
AluBI	AGCT	9 cut(s)	94, 211, 409, 637, 874, 933, 967, 1009, 1306
AluI	AGCT	9 cut(s)	94, 211, 409, 637, 874, 933, 967, 1009, 1306
Alw21I	GWGCWC	4 cut(s)	52, 564, 639, 935
Alw26I	GTCTC	1 cut(s)	1212
AlwI	GGATC	3 cut(s)	848, 915, 1360
Ama87I	CYCGRG	1 cut(s)	1140
AoxI	GGCC	7 cut(s)	122, 197, 264, 384, 894, 1291, 1380
ApaI	GGGCCC	1 cut(s)	201
ApeKI	GCWGC	6 cut(s)	32, 208, 314, 967, 1102, 1306
ApoI	RAATTY	2 cut(s)	308, 1452
ArsI	GACNNNNNNTTYG	2 cut(s)	275, 307
AsiGI	ACCGGT	1 cut(s)	165
AspLEI	GCGC	1 cut(s)	381
AspS9I	GGNCC	9 cut(s)	110, 123, 197, 198, 222, 357, 368, 385, 1206
AsuC2I	CCSGG	2 cut(s)	108, 230
AsuHPI	GGTGA	6 cut(s)	512, 680, 812, 952, 1030, 1375
AvaI	CYCGRG	1 cut(s)	1140
AvaII	GGWCC	5 cut(s)	110, 222, 357, 368, 1206
BaeGI	GKGCMC	3 cut(s)	201, 1184, 1340
BalI	TGGCCA	1 cut(s)	1382
BanI	GGYRCC	4 cut(s)	378, 1114, 1126, 1181
BanII	GRGCYC	5 cut(s)	201, 245, 608, 639, 935
BbsI	GAAGAC	5 cut(s)	597, 731, 810, 1152, 1502
Bbv12I	GWGCWC	4 cut(s)	52, 564, 639, 935
BbvI	GCAGC	6 cut(s)	19, 220, 326, 954, 1089, 1293
BccI	CCATC	3 cut(s)	134, 209, 1029
BcgI	CGANNNNNNTGC	4 cut(s)	544, 578, 1131, 1165
BciT130I	CCWGG	7 cut(s)	121, 383, 905, 1295, 1341, 1370, 1379
BciVI	GTATCC	1 cut(s)	1491
BcnI	CCSGG	2 cut(s)	108, 230
BcoDI	GTCTC	1 cut(s)	1212
BfaI	CTAG	3 cut(s)	1010, 1136, 1193
BfmI	CTRYAG	1 cut(s)	1345
BfoI	RGCGCY	1 cut(s)	382
BfuAI	ACCTGC	1 cut(s)	785
BfuI	GTATCC	1 cut(s)	1491
BlpI	GCTNAGC	2 cut(s)	647, 934
Bme1390I	CCNGG	9 cut(s)	108, 121, 230, 383, 905, 1295, 1341, 1370, 1379
Bme18I	GGWCC	5 cut(s)	110, 222, 357, 368, 1206
BmeRI	GACNNNNNGTC	1 cut(s)	887
BmeT110I	CYCGRG	1 cut(s)	1140
BmgT120I	GGNCC	9 cut(s)	110, 123, 197, 198, 222, 357, 368, 385, 1206
BmiI	GGNNCC	9 cut(s)	199, 223, 224, 359, 380, 1116, 1128, 1183, 1265
BmrFI	CCNGG	9 cut(s)	108, 121, 230, 383, 905, 1295, 1341, 1370, 1379
BmrI	ACTGGG	1 cut(s)	1103
BmsI	GCATC	2 cut(s)	1066, 1365
BmuI	ACTGGG	1 cut(s)	1103
BpiI	GAAGAC	5 cut(s)	597, 731, 810, 1152, 1502
Bpu10I	CCTNAGC	2 cut(s)	261, 971
Bpu1102I	GCTNAGC	2 cut(s)	647, 934
BpuEI	CTTGAG	1 cut(s)	197
BpuMI	CCSGG	2 cut(s)	108, 230
BsaHI	GRCGYC	1 cut(s)	379
BsaI	GGTCTC	1 cut(s)	1212
BsaJI	CCNNGG	8 cut(s)	119, 680, 903, 1086, 1176, 1267, 1339, 1351
BsaWI	WCCGGW	1 cut(s)	165
BsaXI	ACNNNNNCTCC	4 cut(s)	39, 69, 749, 779
Bsc4I	CCNNNNNNNGG	4 cut(s)	18, 131, 951, 1273
Bse118I	RCCGGY	3 cut(s)	165, 317, 917
Bse1I	ACTGG	1 cut(s)	1109
Bse3DI	GCAATG	2 cut(s)	467, 1080
BseBI	CCWGG	7 cut(s)	121, 383, 905, 1295, 1341, 1370, 1379
BseDI	CCNNGG	8 cut(s)	119, 680, 903, 1086, 1176, 1267, 1339, 1351
BseGI	GGATG	5 cut(s)	60, 637, 775, 1170, 1338
BseLI	CCNNNNNNNGG	4 cut(s)	18, 131, 951, 1273
BseMI	GCAATG	2 cut(s)	467, 1080
BseMII	CTCAG	5 cut(s)	487, 638, 918, 948, 1248
BseNI	ACTGG	1 cut(s)	1109
BseRI	GAGGAG	3 cut(s)	56, 1019, 1445
BseSI	GKGCMC	3 cut(s)	201, 1184, 1340
BseXI	GCAGC	6 cut(s)	19, 220, 326, 954, 1089, 1293
BseYI	CCCAGC	1 cut(s)	43
BsgI	GTGCAG	1 cut(s)	1088
Bsh1285I	CGRYCG	2 cut(s)	234, 600
BshFI	GGCC	7 cut(s)	124, 199, 266, 386, 896, 1293, 1382
BshNI	GGYRCC	4 cut(s)	378, 1114, 1126, 1181
BshTI	ACCGGT	1 cut(s)	165
BsiEI	CGRYCG	2 cut(s)	234, 600
BsiHKAI	GWGCWC	4 cut(s)	52, 564, 639, 935
BsiHKCI	CYCGRG	1 cut(s)	1140
BsiSI	CCGG	7 cut(s)	108, 166, 230, 297, 318, 918, 980
BslFI	GGGAC	3 cut(s)	208, 343, 1247
BslI	CCNNNNNNNGG	4 cut(s)	18, 131, 951, 1273
BsmAI	GTCTC	1 cut(s)	1212
BsmFI	GGGAC	3 cut(s)	208, 343, 1247
BsnI	GGCC	7 cut(s)	124, 199, 266, 386, 896, 1293, 1382
Bso31I	GGTCTC	1 cut(s)	1212
BsoBI	CYCGRG	1 cut(s)	1140
Bsp120I	GGGCCC	1 cut(s)	197
Bsp1286I	GDGCHC	9 cut(s)	52, 201, 245, 564, 608, 639, 935, 1184, 1340
Bsp1407I	TGTACA	1 cut(s)	772
Bsp143I	GATC	5 cut(s)	517, 597, 853, 907, 1365
Bsp1720I	GCTNAGC	2 cut(s)	647, 934
BspACI	CCGC	9 cut(s)	36, 73, 76, 82, 88, 104, 553, 651, 938
BspANI	GGCC	7 cut(s)	124, 199, 266, 386, 896, 1293, 1382
BspCNI	CTCAG	5 cut(s)	486, 639, 919, 947, 1249
BspLI	GGNNCC	9 cut(s)	199, 223, 224, 359, 380, 1116, 1128, 1183, 1265
BspMI	ACCTGC	1 cut(s)	785
BspPI	GGATC	3 cut(s)	848, 915, 1360
BspQI	GCTCTTC	2 cut(s)	250, 644
BspT107I	GGYRCC	4 cut(s)	378, 1114, 1126, 1181
BspTNI	GGTCTC	1 cut(s)	1212
BsrBI	CCGCTC	1 cut(s)	651
BsrDI	GCAATG	2 cut(s)	467, 1080
BsrFI	RCCGGY	3 cut(s)	165, 317, 917
BsrGI	TGTACA	1 cut(s)	772
BsrI	ACTGG	1 cut(s)	1109
BssAI	RCCGGY	3 cut(s)	165, 317, 917
BssECI	CCNNGG	8 cut(s)	119, 680, 903, 1086, 1176, 1267, 1339, 1351
BssMI	GATC	5 cut(s)	517, 597, 853, 907, 1365
BssNI	GRCGYC	1 cut(s)	379
BssT1I	CCWWGG	4 cut(s)	1086, 1176, 1267, 1351
Bst2UI	CCWGG	7 cut(s)	121, 383, 905, 1295, 1341, 1370, 1379
Bst4CI	ACNGT	4 cut(s)	368, 532, 681, 946
Bst6I	CTCTTC	6 cut(s)	250, 644, 1021, 1038, 1210, 1239
BstACI	GRCGYC	1 cut(s)	379
BstAPI	GCANNNNNTGC	1 cut(s)	32
BstAUI	TGTACA	1 cut(s)	772
BstC8I	GCNNGC	3 cut(s)	92, 1162, 1375
BstDEI	CTNAG	8 cut(s)	261, 427, 473, 647, 927, 934, 971, 1257
BstDSI	CCRYGG	1 cut(s)	680
BstEII	GGTNACC	1 cut(s)	940
BstENI	CCTNNNNNAGG	1 cut(s)	1271
BstF5I	GGATG	5 cut(s)	60, 637, 775, 1170, 1338
BstH2I	RGCGCY	1 cut(s)	382
BstHHI	GCGC	1 cut(s)	381
BstKTI	GATC	5 cut(s)	520, 600, 856, 910, 1368
BstMAI	GTCTC	1 cut(s)	1212
BstMBI	GATC	5 cut(s)	517, 597, 853, 907, 1365
BstMCI	CGRYCG	2 cut(s)	234, 600
BstMWI	GCNNNNNNNGC	7 cut(s)	32, 81, 100, 205, 643, 976, 1379
BstNI	CCWGG	7 cut(s)	121, 383, 905, 1295, 1341, 1370, 1379
BstNSI	RCATGY	1 cut(s)	764
BstPI	GGTNACC	1 cut(s)	940
BstSCI	CCNGG	9 cut(s)	106, 119, 228, 381, 903, 1293, 1339, 1368, 1377
BstSFI	CTRYAG	1 cut(s)	1345
BstSLI	GKGCMC	3 cut(s)	201, 1184, 1340
BstV1I	GCAGC	6 cut(s)	19, 220, 326, 954, 1089, 1293
BstV2I	GAAGAC	5 cut(s)	597, 731, 810, 1152, 1502
BstX2I	RGATCY	1 cut(s)	907
BstXI	CCANNNNNNTGG	3 cut(s)	120, 194, 1160
BstYI	RGATCY	1 cut(s)	907
BsuI	GTATCC	1 cut(s)	1491
BsuRI	GGCC	7 cut(s)	124, 199, 266, 386, 896, 1293, 1382
BtgI	CCRYGG	1 cut(s)	680
BtsCI	GGATG	5 cut(s)	60, 637, 775, 1170, 1338
BtsIMutI	CAGTG	2 cut(s)	421, 1116
BveI	ACCTGC	1 cut(s)	785
Cac8I	GCNNGC	3 cut(s)	92, 1162, 1375
CfoI	GCGC	1 cut(s)	381
Cfr10I	RCCGGY	3 cut(s)	165, 317, 917
Cfr13I	GGNCC	9 cut(s)	110, 123, 197, 198, 222, 357, 368, 385, 1206
CseI	GACGC	1 cut(s)	432
Csp6I	GTAC	3 cut(s)	574, 709, 773
CspAI	ACCGGT	1 cut(s)	165
CviQI	GTAC	3 cut(s)	574, 709, 773
DdeI	CTNAG	8 cut(s)	261, 427, 473, 647, 927, 934, 971, 1257
DinI	GGCGCC	1 cut(s)	380
DpnI	GATC	5 cut(s)	519, 599, 855, 909, 1367
DpnII	GATC	5 cut(s)	517, 597, 853, 907, 1365
DraIII	CACNNNGTG	1 cut(s)	1111
DrdI	GACNNNNNNGTC	1 cut(s)	1283
DriI	GACNNNNNGTC	1 cut(s)	887
DseDI	GACNNNNNNGTC	1 cut(s)	1283
EaeI	YGGCCR	1 cut(s)	1380
Eam1104I	CTCTTC	6 cut(s)	250, 644, 1021, 1038, 1210, 1239
Eam1105I	GACNNNNNGTC	1 cut(s)	887
EarI	CTCTTC	6 cut(s)	250, 644, 1021, 1038, 1210, 1239
EciI	GGCGGA	1 cut(s)	71
Ecl136II	GAGCTC	2 cut(s)	637, 933
Eco130I	CCWWGG	4 cut(s)	1086, 1176, 1267, 1351
Eco147I	AGGCCT	2 cut(s)	266, 896
Eco24I	GRGCYC	5 cut(s)	201, 245, 608, 639, 935
Eco31I	GGTCTC	1 cut(s)	1212
Eco47I	GGWCC	5 cut(s)	110, 222, 357, 368, 1206
Eco53kI	GAGCTC	2 cut(s)	637, 933
Eco88I	CYCGRG	1 cut(s)	1140
Eco91I	GGTNACC	1 cut(s)	940
EcoICRI	GAGCTC	2 cut(s)	637, 933
EcoNI	CCTNNNNNAGG	1 cut(s)	1271
EcoO109I	RGGNCCY	1 cut(s)	222
EcoO65I	GGTNACC	1 cut(s)	940
EcoRII	CCWGG	7 cut(s)	119, 381, 903, 1293, 1339, 1368, 1377
EcoT14I	CCWWGG	4 cut(s)	1086, 1176, 1267, 1351
EcoT38I	GRGCYC	5 cut(s)	201, 245, 608, 639, 935
EgeI	GGCGCC	1 cut(s)	380
EheI	GGCGCC	1 cut(s)	380
ErhI	CCWWGG	4 cut(s)	1086, 1176, 1267, 1351
FalI	AAGNNNNNCTT	4 cut(s)	507, 539, 858, 890
FaqI	GGGAC	3 cut(s)	208, 343, 1247
FauI	CCCGC	2 cut(s)	80, 644
FauNDI	CATATG	1 cut(s)	436
FokI	GGATG	5 cut(s)	47, 644, 782, 1157, 1345
FriOI	GRGCYC	5 cut(s)	201, 245, 608, 639, 935
FspBI	CTAG	3 cut(s)	1010, 1136, 1193
GlaI	GCGC	1 cut(s)	380
GsaI	CCCAGC	1 cut(s)	47
HaeII	RGCGCY	1 cut(s)	382
HaeIII	GGCC	7 cut(s)	124, 199, 266, 386, 896, 1293, 1382
HapII	CCGG	7 cut(s)	108, 166, 230, 297, 318, 918, 980
HgaI	GACGC	1 cut(s)	432
HhaI	GCGC	1 cut(s)	381
Hin1I	GRCGYC	1 cut(s)	379
Hin6I	GCGC	1 cut(s)	379
HinP1I	GCGC	1 cut(s)	379
HincII	GTYRAC	2 cut(s)	253, 1060
HindII	GTYRAC	2 cut(s)	253, 1060
HindIII	AAGCTT	1 cut(s)	872
HinfI	GANTC	9 cut(s)	8, 431, 488, 535, 584, 593, 671, 888, 1188
HpaII	CCGG	7 cut(s)	108, 166, 230, 297, 318, 918, 980
HphI	GGTGA	6 cut(s)	512, 680, 812, 952, 1030, 1375
Hpy166II	GTNNAC	6 cut(s)	253, 576, 1060, 1401, 1502, 1525
Hpy188I	TCNGA	7 cut(s)	346, 449, 476, 566, 589, 964, 1535
Hpy188III	TCNNGA	5 cut(s)	271, 601, 619, 991, 1204
Hpy8I	GTNNAC	6 cut(s)	253, 576, 1060, 1401, 1502, 1525
Hpy99I	CGWCG	3 cut(s)	239, 287, 950
HpyAV	CCTTC	5 cut(s)	277, 301, 784, 988, 1420
HpyCH4III	ACNGT	4 cut(s)	368, 532, 681, 946
HpyCH4IV	ACGT	2 cut(s)	285, 1521
HpyCH4V	TGCA	9 cut(s)	26, 179, 208, 703, 782, 815, 841, 1105, 1493
HpyF10VI	GCNNNNNNNGC	7 cut(s)	32, 81, 100, 205, 643, 976, 1379
HpyF3I	CTNAG	8 cut(s)	261, 427, 473, 647, 927, 934, 971, 1257
HpySE526I	ACGT	2 cut(s)	285, 1521
Hsp92I	GRCGYC	1 cut(s)	379
HspAI	GCGC	1 cut(s)	379
KasI	GGCGCC	1 cut(s)	378
KflI	GGGWCCC	1 cut(s)	222
Kzo9I	GATC	5 cut(s)	517, 597, 853, 907, 1365
LguI	GCTCTTC	2 cut(s)	250, 644
LmnI	GCTCC	5 cut(s)	47, 406, 757, 1006, 1314
Lsp1109I	GCAGC	6 cut(s)	19, 220, 326, 954, 1089, 1293
LweI	GCATC	2 cut(s)	1066, 1365
MaeI	CTAG	3 cut(s)	1010, 1136, 1193
MaeII	ACGT	2 cut(s)	285, 1521
MaeIII	GTNAC	3 cut(s)	286, 668, 940
MalI	GATC	5 cut(s)	519, 599, 855, 909, 1367
MbiI	CCGCTC	1 cut(s)	651
MboI	GATC	5 cut(s)	517, 597, 853, 907, 1365
MflI	RGATCY	1 cut(s)	907
MhlI	GDGCHC	9 cut(s)	52, 201, 245, 564, 608, 639, 935, 1184, 1340
MlsI	TGGCCA	1 cut(s)	1382
MluCI	AATT	5 cut(s)	97, 308, 912, 957, 1452
MluNI	TGGCCA	1 cut(s)	1382
Mly113I	GGCGCC	1 cut(s)	379
MlyI	GAGTC	6 cut(s)	497, 544, 587, 593, 665, 897
MmeI	TCCRAC	5 cut(s)	519, 567, 609, 723, 747
Mox20I	TGGCCA	1 cut(s)	1382
MscI	TGGCCA	1 cut(s)	1382
MseI	TTAA	2 cut(s)	540, 870
MslI	CAYNNNNRTG	2 cut(s)	1124, 1361
Msp20I	TGGCCA	1 cut(s)	1382
MspA1I	CMGCKG	1 cut(s)	938
MspI	CCGG	7 cut(s)	108, 166, 230, 297, 318, 918, 980
MspR9I	CCNGG	9 cut(s)	108, 121, 230, 383, 905, 1295, 1341, 1370, 1379
MvaI	CCWGG	7 cut(s)	121, 383, 905, 1295, 1341, 1370, 1379
MwoI	GCNNNNNNNGC	7 cut(s)	32, 81, 100, 205, 643, 976, 1379
NarI	GGCGCC	1 cut(s)	379
NciI	CCSGG	2 cut(s)	108, 230
NdeI	CATATG	1 cut(s)	436
NdeII	GATC	5 cut(s)	517, 597, 853, 907, 1365
NlaIV	GGNNCC	9 cut(s)	199, 223, 224, 359, 380, 1116, 1128, 1183, 1265
NmuCI	GTSAC	2 cut(s)	668, 940
NspI	RCATGY	1 cut(s)	764
PaqCI	CACCTGC	1 cut(s)	785
PceI	AGGCCT	2 cut(s)	266, 896
PciSI	GCTCTTC	2 cut(s)	250, 644
PcsI	WCGNNNNNNNCGW	2 cut(s)	593, 606
PfeI	GAWTC	3 cut(s)	8, 431, 1188
PflFI	GACNNNGTC	1 cut(s)	1055
PflMI	CCANNNNNTGG	1 cut(s)	18
PinAI	ACCGGT	1 cut(s)	165
Ple19I	CGATCG	1 cut(s)	600
PleI	GAGTC	6 cut(s)	496, 543, 587, 592, 665, 896
PluTI	GGCGCC	1 cut(s)	382
PpsI	GAGTC	6 cut(s)	496, 543, 587, 592, 665, 896
PpuMI	RGGWCCY	1 cut(s)	222
PsiI	TTATAA	1 cut(s)	548
Psp124BI	GAGCTC	2 cut(s)	639, 935
Psp5II	RGGWCCY	1 cut(s)	222
Psp6I	CCWGG	7 cut(s)	119, 381, 903, 1293, 1339, 1368, 1377
PspEI	GGTNACC	1 cut(s)	940
PspFI	CCCAGC	1 cut(s)	43
PspGI	CCWGG	7 cut(s)	119, 381, 903, 1293, 1339, 1368, 1377
PspN4I	GGNNCC	9 cut(s)	199, 223, 224, 359, 380, 1116, 1128, 1183, 1265
PspOMI	GGGCCC	1 cut(s)	197
PspPI	GGNCC	9 cut(s)	110, 123, 197, 198, 222, 357, 368, 385, 1206
PspPPI	RGGWCCY	1 cut(s)	222
PsuI	RGATCY	1 cut(s)	907
PsyI	GACNNNGTC	1 cut(s)	1055
PvuI	CGATCG	1 cut(s)	600
RsaI	GTAC	3 cut(s)	575, 710, 774
RsaNI	GTAC	3 cut(s)	574, 709, 773
RseI	CAYNNNNRTG	2 cut(s)	1124, 1361
SacI	GAGCTC	2 cut(s)	639, 935
SapI	GCTCTTC	2 cut(s)	250, 644
SaqAI	TTAA	2 cut(s)	540, 870
Sau3AI	GATC	5 cut(s)	517, 597, 853, 907, 1365
Sau96I	GGNCC	9 cut(s)	110, 123, 197, 198, 222, 357, 368, 385, 1206
SchI	GAGTC	6 cut(s)	497, 544, 587, 593, 665, 897
ScrFI	CCNGG	9 cut(s)	108, 121, 230, 383, 905, 1295, 1341, 1370, 1379
SduI	GDGCHC	9 cut(s)	52, 201, 245, 564, 608, 639, 935, 1184, 1340
SfaNI	GCATC	2 cut(s)	1066, 1365
SfcI	CTRYAG	1 cut(s)	1345
SfoI	GGCGCC	1 cut(s)	380
SinI	GGWCC	5 cut(s)	110, 222, 357, 368, 1206
SmiMI	CAYNNNNRTG	2 cut(s)	1124, 1361
SmlI	CTYRAG	1 cut(s)	212
SmoI	CTYRAG	1 cut(s)	212
Sse9I	AATT	5 cut(s)	97, 308, 912, 957, 1452
SseBI	AGGCCT	2 cut(s)	266, 896
SsiI	CCGC	9 cut(s)	36, 73, 76, 82, 88, 104, 553, 651, 938
SspDI	GGCGCC	1 cut(s)	378
SspI	AATATT	1 cut(s)	664
SspMI	CTAG	3 cut(s)	1010, 1136, 1193
SstI	GAGCTC	2 cut(s)	639, 935
StuI	AGGCCT	2 cut(s)	266, 896
StyD4I	CCNGG	9 cut(s)	106, 119, 228, 381, 903, 1293, 1339, 1368, 1377
StyI	CCWWGG	4 cut(s)	1086, 1176, 1267, 1351
TaaI	ACNGT	4 cut(s)	368, 532, 681, 946
TaiI	ACGT	2 cut(s)	288, 1524
TaqI	TCGA	2 cut(s)	596, 948
TasI	AATT	5 cut(s)	97, 308, 912, 957, 1452
TatI	WGTACW	2 cut(s)	573, 772
TauI	GCSGC	4 cut(s)	38, 78, 106, 555
TfiI	GAWTC	3 cut(s)	8, 431, 1188
Tru1I	TTAA	2 cut(s)	540, 870
Tru9I	TTAA	2 cut(s)	540, 870
TscAI	CASTG	2 cut(s)	421, 1116
TseFI	GTSAC	2 cut(s)	668, 940
TseI	GCWGC	6 cut(s)	32, 208, 314, 967, 1102, 1306
Tsp45I	GTSAC	2 cut(s)	668, 940
TspDTI	ATGAA	3 cut(s)	453, 476, 737
TspGWI	ACGGA	1 cut(s)	593
TspRI	CASTG	2 cut(s)	421, 1116
Tth111I	GACNNNGTC	1 cut(s)	1055
Van91I	CCANNNNNTGG	1 cut(s)	18
VpaK11BI	GGWCC	5 cut(s)	110, 222, 357, 368, 1206
XagI	CCTNNNNNAGG	1 cut(s)	1271
XapI	RAATTY	2 cut(s)	308, 1452
XceI	RCATGY	1 cut(s)	764
XspI	CTAG	3 cut(s)	1010, 1136, 1193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.