Belongs to the Casparian strip membrane proteins (CASP) family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79780 AT3G16300 |
| fragaria_vesca | FvH4_6g32160 |
| malus_domestica | MD09G1205900.v1.1 |
| prunus_persica | Prupe.3G061300_v2.0.a1 Prupe.3G065500_v2.0.a1 |
| pyrus_communis | pycom09g12270 |
| rosa_chinensis | RchiOBHm_Chr2g0140051 |
| rosa_multiflora | Rmu_sc0003365.1_g000011 Rmu_sc0012959.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00105110 |
| rosa_rugosa | Rorug02G0360800 |
| rosa_samantha | Rh2AG411400 Rh2BG421600 Rh2CG397500 Rh2DG431100 |
| rosa_wichuraiana | Rw2G033700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 325 |
| AclWI | GGATC | 3 cut(s) | 228, 289, 302 |
| AcoI | YGGCCR | 1 cut(s) | 396 |
| AfaI | GTAC | 2 cut(s) | 228, 289 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 297, 304, 394 |
| AhlI | ACTAGT | 1 cut(s) | 139 |
| AluBI | AGCT | 3 cut(s) | 113, 122, 260 |
| AluI | AGCT | 3 cut(s) | 113, 122, 260 |
| Alw26I | GTCTC | 1 cut(s) | 177 |
| AlwI | GGATC | 3 cut(s) | 228, 289, 302 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 113 |
| AoxI | GGCC | 1 cut(s) | 396 |
| ApeKI | GCWGC | 5 cut(s) | 110, 133, 160, 260, 384 |
| AseI | ATTAAT | 1 cut(s) | 179 |
| AspLEI | GCGC | 1 cut(s) | 251 |
| AsuC2I | CCSGG | 2 cut(s) | 268, 292 |
| BalI | TGGCCA | 1 cut(s) | 398 |
| BamHI | GGATCC | 1 cut(s) | 294 |
| BbvCI | CCTCAGC | 1 cut(s) | 164 |
| BbvI | GCAGC | 5 cut(s) | 120, 122, 147, 247, 396 |
| BccI | CCATC | 1 cut(s) | 32 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 335, 369 |
| BcnI | CCSGG | 2 cut(s) | 268, 292 |
| BcoDI | GTCTC | 1 cut(s) | 177 |
| BcuI | ACTAGT | 1 cut(s) | 139 |
| BfaI | CTAG | 1 cut(s) | 140 |
| BisI | GCNGC | 5 cut(s) | 111, 134, 161, 261, 385 |
| BlsI | GCNGC | 5 cut(s) | 112, 135, 162, 262, 386 |
| Bme1390I | CCNGG | 2 cut(s) | 268, 292 |
| BmiI | GGNNCC | 1 cut(s) | 296 |
| BmrFI | CCNGG | 2 cut(s) | 268, 292 |
| BmsI | GCATC | 1 cut(s) | 272 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 157, 189 |
| Bpu10I | CCTNAGC | 1 cut(s) | 164 |
| BpuEI | CTTGAG | 2 cut(s) | 172, 400 |
| BpuMI | CCSGG | 2 cut(s) | 268, 292 |
| Bsa29I | ATCGAT | 1 cut(s) | 58 |
| BsaJI | CCNNGG | 1 cut(s) | 267 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 297, 304, 394 |
| Bse3DI | GCAATG | 2 cut(s) | 128, 246 |
| BseCI | ATCGAT | 1 cut(s) | 58 |
| BseDI | CCNNGG | 1 cut(s) | 267 |
| BseGI | GGATG | 3 cut(s) | 10, 27, 263 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 297, 304, 394 |
| BseMI | GCAATG | 2 cut(s) | 128, 246 |
| BseMII | CTCAG | 1 cut(s) | 155 |
| BseXI | GCAGC | 5 cut(s) | 120, 122, 147, 247, 396 |
| BseYI | CCCAGC | 1 cut(s) | 215 |
| BsgI | GTGCAG | 1 cut(s) | 355 |
| BshFI | GGCC | 1 cut(s) | 398 |
| BshVI | ATCGAT | 1 cut(s) | 58 |
| BsiSI | CCGG | 3 cut(s) | 267, 291, 298 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 297, 304, 394 |
| BsmAI | GTCTC | 1 cut(s) | 177 |
| BsnI | GGCC | 1 cut(s) | 398 |
| Bsp143I | GATC | 4 cut(s) | 59, 84, 220, 294 |
| BspANI | GGCC | 1 cut(s) | 398 |
| BspCNI | CTCAG | 1 cut(s) | 156 |
| BspDI | ATCGAT | 1 cut(s) | 58 |
| BspHI | TCATGA | 1 cut(s) | 34 |
| BspLI | GGNNCC | 1 cut(s) | 296 |
| BspPI | GGATC | 3 cut(s) | 228, 289, 302 |
| BsrDI | GCAATG | 2 cut(s) | 128, 246 |
| BssECI | CCNNGG | 1 cut(s) | 267 |
| BssMI | GATC | 4 cut(s) | 59, 84, 220, 294 |
| BssNAI | GTATAC | 1 cut(s) | 326 |
| Bst1107I | GTATAC | 1 cut(s) | 326 |
| Bst4CI | ACNGT | 1 cut(s) | 287 |
| BstC8I | GCNNGC | 2 cut(s) | 370, 396 |
| BstDEI | CTNAG | 1 cut(s) | 164 |
| BstF5I | GGATG | 3 cut(s) | 10, 27, 263 |
| BstHHI | GCGC | 1 cut(s) | 251 |
| BstKTI | GATC | 4 cut(s) | 62, 87, 223, 297 |
| BstMAI | GTCTC | 1 cut(s) | 177 |
| BstMBI | GATC | 4 cut(s) | 59, 84, 220, 294 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 119, 257, 404 |
| BstSCI | CCNGG | 2 cut(s) | 266, 290 |
| BstV1I | GCAGC | 5 cut(s) | 120, 122, 147, 247, 396 |
| BstX2I | RGATCY | 1 cut(s) | 294 |
| BstYI | RGATCY | 1 cut(s) | 294 |
| BstZ17I | GTATAC | 1 cut(s) | 326 |
| Bsu15I | ATCGAT | 1 cut(s) | 58 |
| BsuRI | GGCC | 1 cut(s) | 398 |
| BsuTUI | ATCGAT | 1 cut(s) | 58 |
| BtsCI | GGATG | 3 cut(s) | 10, 27, 263 |
| Cac8I | GCNNGC | 2 cut(s) | 370, 396 |
| CaiI | CAGNNNCTG | 1 cut(s) | 113 |
| CciI | TCATGA | 1 cut(s) | 34 |
| CfoI | GCGC | 1 cut(s) | 251 |
| ClaI | ATCGAT | 1 cut(s) | 58 |
| Csp6I | GTAC | 2 cut(s) | 227, 288 |
| CviAII | CATG | 6 cut(s) | 35, 88, 197, 201, 304, 350 |
| CviQI | GTAC | 2 cut(s) | 227, 288 |
| DdeI | CTNAG | 1 cut(s) | 164 |
| DpnI | GATC | 4 cut(s) | 61, 86, 222, 296 |
| DpnII | GATC | 4 cut(s) | 59, 84, 220, 294 |
| EaeI | YGGCCR | 1 cut(s) | 396 |
| EcoT22I | ATGCAT | 1 cut(s) | 202 |
| FaeI | CATG | 6 cut(s) | 38, 91, 200, 204, 307, 353 |
| FatI | CATG | 6 cut(s) | 34, 87, 196, 200, 303, 349 |
| FauNDI | CATATG | 1 cut(s) | 235 |
| FblI | GTMKAC | 1 cut(s) | 325 |
| Fnu4HI | GCNGC | 5 cut(s) | 111, 134, 161, 261, 385 |
| FokI | GGATG | 3 cut(s) | 17, 34, 250 |
| Fsp4HI | GCNGC | 5 cut(s) | 111, 134, 161, 261, 385 |
| FspBI | CTAG | 1 cut(s) | 140 |
| GlaI | GCGC | 1 cut(s) | 250 |
| GluI | GCNGC | 5 cut(s) | 111, 134, 161, 261, 385 |
| GsaI | CCCAGC | 1 cut(s) | 219 |
| HaeIII | GGCC | 1 cut(s) | 398 |
| HapII | CCGG | 3 cut(s) | 267, 291, 298 |
| HhaI | GCGC | 1 cut(s) | 251 |
| Hin1II | CATG | 6 cut(s) | 38, 91, 200, 204, 307, 353 |
| Hin6I | GCGC | 1 cut(s) | 249 |
| HinP1I | GCGC | 1 cut(s) | 249 |
| HpaII | CCGG | 3 cut(s) | 267, 291, 298 |
| Hpy166II | GTNNAC | 1 cut(s) | 326 |
| Hpy188I | TCNGA | 1 cut(s) | 64 |
| Hpy188III | TCNNGA | 4 cut(s) | 35, 189, 379, 412 |
| Hpy8I | GTNNAC | 1 cut(s) | 326 |
| HpyCH4III | ACNGT | 1 cut(s) | 287 |
| HpyCH4V | TGCA | 8 cut(s) | 136, 200, 233, 239, 263, 334, 356, 372 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 119, 257, 404 |
| HpyF3I | CTNAG | 1 cut(s) | 164 |
| Hsp92II | CATG | 6 cut(s) | 38, 91, 200, 204, 307, 353 |
| HspAI | GCGC | 1 cut(s) | 249 |
| Kzo9I | GATC | 4 cut(s) | 59, 84, 220, 294 |
| Lsp1109I | GCAGC | 5 cut(s) | 120, 122, 147, 247, 396 |
| LweI | GCATC | 1 cut(s) | 272 |
| MaeI | CTAG | 1 cut(s) | 140 |
| MalI | GATC | 4 cut(s) | 61, 86, 222, 296 |
| MboI | GATC | 4 cut(s) | 59, 84, 220, 294 |
| MflI | RGATCY | 1 cut(s) | 294 |
| MlsI | TGGCCA | 1 cut(s) | 398 |
| MluCI | AATT | 3 cut(s) | 67, 147, 180 |
| MluNI | TGGCCA | 1 cut(s) | 398 |
| MnlI | CCTC | 3 cut(s) | 159, 196, 398 |
| Mox20I | TGGCCA | 1 cut(s) | 398 |
| Mph1103I | ATGCAT | 1 cut(s) | 202 |
| MscI | TGGCCA | 1 cut(s) | 398 |
| MseI | TTAA | 1 cut(s) | 179 |
| Msp20I | TGGCCA | 1 cut(s) | 398 |
| MspA1I | CMGCKG | 2 cut(s) | 113, 260 |
| MspI | CCGG | 3 cut(s) | 267, 291, 298 |
| MspR9I | CCNGG | 2 cut(s) | 268, 292 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 119, 257, 404 |
| NciI | CCSGG | 2 cut(s) | 268, 292 |
| NdeI | CATATG | 1 cut(s) | 235 |
| NdeII | GATC | 4 cut(s) | 59, 84, 220, 294 |
| NlaIII | CATG | 6 cut(s) | 38, 91, 200, 204, 307, 353 |
| NlaIV | GGNNCC | 1 cut(s) | 296 |
| NsiI | ATGCAT | 1 cut(s) | 202 |
| PagI | TCATGA | 1 cut(s) | 34 |
| PkrI | GCNGC | 5 cut(s) | 112, 135, 162, 262, 386 |
| PshBI | ATTAAT | 1 cut(s) | 179 |
| PspFI | CCCAGC | 1 cut(s) | 215 |
| PspN4I | GGNNCC | 1 cut(s) | 296 |
| PstNI | CAGNNNCTG | 1 cut(s) | 113 |
| PsuI | RGATCY | 1 cut(s) | 294 |
| PvuII | CAGCTG | 2 cut(s) | 113, 260 |
| RsaI | GTAC | 2 cut(s) | 228, 289 |
| RsaNI | GTAC | 2 cut(s) | 227, 288 |
| SaqAI | TTAA | 1 cut(s) | 179 |
| SatI | GCNGC | 5 cut(s) | 111, 134, 161, 261, 385 |
| Sau3AI | GATC | 4 cut(s) | 59, 84, 220, 294 |
| ScrFI | CCNGG | 2 cut(s) | 268, 292 |
| SetI | ASST | 7 cut(s) | 115, 124, 228, 257, 262, 282, 331 |
| SfaNI | GCATC | 1 cut(s) | 272 |
| SmlI | CTYRAG | 2 cut(s) | 187, 379 |
| SmoI | CTYRAG | 2 cut(s) | 187, 379 |
| SpeI | ACTAGT | 1 cut(s) | 139 |
| Sse9I | AATT | 3 cut(s) | 67, 147, 180 |
| SspMI | CTAG | 1 cut(s) | 140 |
| StyD4I | CCNGG | 2 cut(s) | 266, 290 |
| TaaI | ACNGT | 1 cut(s) | 287 |
| TaqI | TCGA | 1 cut(s) | 58 |
| TasI | AATT | 3 cut(s) | 67, 147, 180 |
| Tru1I | TTAA | 1 cut(s) | 179 |
| Tru9I | TTAA | 1 cut(s) | 179 |
| TseI | GCWGC | 5 cut(s) | 110, 133, 160, 260, 384 |
| TspDTI | ATGAA | 3 cut(s) | 21, 23, 38 |
| VspI | ATTAAT | 1 cut(s) | 179 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 35 |
| XmiI | GTMKAC | 1 cut(s) | 325 |
| XspI | CTAG | 1 cut(s) | 140 |
| Zsp2I | ATGCAT | 1 cut(s) | 202 |