Prupe.3G197200_v2.0.a1

Fasciclin-like arabinogalactan protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
20761559 .. 20763706
2148 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G197200.1

Sequence Viewer

Length: 1185 bp
ATGCCACACCCACCAGCCCTCACCTCCACCCTAGCCCTCTCAGCCCTCTTCCTCTTCCTCCTCTCCTCCACATCCCAAGCACATAACATTACACGCATACTCGCCAAACACCCCGAGCTCTCCTCCTTCAACCACTACCTCACCCTCACCCACCTCGCCACCGAGATCAACCGCCGCCAGACCATCACCGTCCTCGCCATCGACAATGCCGCCATGTCTTCCCTCCTCTCCAAAGGACTCTCTGTCTACACTATAAAGAATGTGCTTTCCCTCCATGTTCTTGTGGATTACTTCGGTGCCAAGAAACTTCACCAGATCACCCACGGCACCACCTTGGCTAGCAGCATGTTCCAGGCCACGGGGGTGGCGGCAGGGACTTCGGGGTACGTGAACATCACCAACCTCAAGGGCGGTAAAGTCGGCTTCGGAGCTCAAGACAATGATGGGAAGCTCAATTCCTTCTATGTGAAGTCTGTGCAGGAGATTCCATACAATATCTCCGTCTTGCAAATCAGTCAGGTGTTAACTTCGGCGGAAGCTGAGGCGCCAACCGCAGGGCCAAGCCAGCTGAACCTAACCGCGATCCTATCAAAGCAAGGCTGCAAAGCCTTCGCCGACTTGCTGATCTCATCGGGAGCAGACACGACCTTCGAGACCAACATTGACGGAGGCCTAACGGTGTTTTGCCCGACGGACGCCGTCATCAACGGCTTCCTCCCCAAGTACAAAAACCTAACGACATCCCAAAAGGTGTCTTTGCTGCTCTACCACGGCATCCCCGTGTACCAGTCCCTCCAGATGCTCAAGTCCAACAACGGCCTCGTCAACACCCTGGCCACCGACAAGGCCAACAAGTTCGATTTCACCGTCCAAAATGACGGCGAGGTCGTCAGCTTGGAGACGGAGGTCGTGACGGCGAAGATAACGGGGACGTTGATCGACGAGGAGCCTCTGGTGATTTACAAGGTGAACAAGGTCTTGCAGCCGACGGAGCTGTTCAAGGTGAAGACGGCGCCTGCGCCAAAGGAGGTCGCTGAGGGGCCGGATGATTCTGCTGACGCGCCGGGATCTGATGATTCGGACGATCAAACGGCTGATAGTGATAAGAATGGAGACGCGGGATTGGACGGTGGGAGATTGGGTATGGTTGTTTTGAGTTTGTGCGTTGGGGTTTTGCTTATGTGA

Protein Analysis

395

Amino Acids

41.86

Weight (kDa)

5.46

Isoelectric Point (pI)

32.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 884
AccB1I GGYRCC 4 cut(s) 296, 326, 544, 1012
AccI GTMKAC 1 cut(s) 246
AccII CGCG 3 cut(s) 581, 1061, 1118
AciI CCGC 9 cut(s) 172, 175, 210, 368, 411, 533, 552, 579, 1118
AclWI GGATC 2 cut(s) 577, 1075
AcoI YGGCCR 1 cut(s) 834
AcyI GRCGYC 3 cut(s) 545, 696, 1013
AfaI GTAC 3 cut(s) 386, 725, 785
AfiI CCNNNNNNNGG 2 cut(s) 358, 554
AgsI TTSAA 2 cut(s) 130, 1000
AhdI GACNNNNNGTC 1 cut(s) 242
AjnI CCWGG 2 cut(s) 351, 831
AleI CACNNNNGTG 1 cut(s) 362
AluBI AGCT 7 cut(s) 118, 431, 451, 539, 568, 894, 994
AluI AGCT 7 cut(s) 118, 431, 451, 539, 568, 894, 994
Alw21I GWGCWC 2 cut(s) 120, 433
Alw26I GTCTC 3 cut(s) 647, 893, 1107
AlwI GGATC 2 cut(s) 577, 1075
Ama87I CYCGRG 1 cut(s) 113
AoxI GGCC 7 cut(s) 354, 557, 670, 817, 834, 846, 1040
ApeKI GCWGC 4 cut(s) 342, 600, 760, 982
ArsI GACNNNNNNTTYG 2 cut(s) 632, 664
AspLEI GCGC 4 cut(s) 547, 1015, 1021, 1063
AspS9I GGNCC 2 cut(s) 557, 1040
AsuC2I CCSGG 1 cut(s) 1065
AsuNHI GCTAGC 1 cut(s) 338
AvaI CYCGRG 1 cut(s) 113
BalI TGGCCA 1 cut(s) 836
BanI GGYRCC 4 cut(s) 296, 326, 544, 1012
BanII GRGCYC 2 cut(s) 120, 433
BbsI GAAGAC 2 cut(s) 210, 1013
Bbv12I GWGCWC 2 cut(s) 120, 433
BbvCI CCTCAGC 2 cut(s) 540, 1035
BbvI GCAGC 4 cut(s) 354, 587, 747, 994
BccI CCATC 3 cut(s) 191, 206, 437
BceAI ACGGC 9 cut(s) 340, 683, 724, 787, 832, 895, 930, 1026, 1107
BcgI CGANNNNNNTGC 4 cut(s) 360, 394, 592, 626
BciT130I CCWGG 2 cut(s) 353, 833
BcnI CCSGG 1 cut(s) 1065
BcoDI GTCTC 3 cut(s) 647, 893, 1107
BfaI CTAG 2 cut(s) 32, 339
BfoI RGCGCY 2 cut(s) 548, 1016
BisI GCNGC 7 cut(s) 175, 210, 343, 369, 601, 761, 983
BlsI GCNGC 7 cut(s) 176, 211, 344, 370, 602, 762, 984
Bme1390I CCNGG 3 cut(s) 353, 833, 1065
BmeRI GACNNNNNGTC 1 cut(s) 242
BmeT110I CYCGRG 1 cut(s) 113
BmgT120I GGNCC 2 cut(s) 557, 1040
BmiI GGNNCC 6 cut(s) 298, 328, 546, 948, 1014, 1041
BmrFI CCNGG 3 cut(s) 353, 833, 1065
BmsI GCATC 2 cut(s) 783, 789
BmtI GCTAGC 1 cut(s) 342
BoxI GACNNNNGTC 1 cut(s) 905
BpiI GAAGAC 2 cut(s) 210, 1013
BplI GAGNNNNNCTC 2 cut(s) 107, 139
BpmI CTGGAG 1 cut(s) 779
Bpu10I CCTNAGC 2 cut(s) 540, 1035
BpuEI CTTGAG 3 cut(s) 389, 417, 788
BpuMI CCSGG 1 cut(s) 1065
BsaAI YACGTR 1 cut(s) 388
BsaHI GRCGYC 3 cut(s) 545, 696, 1013
BsaI GGTCTC 1 cut(s) 647
BsaJI CCNNGG 5 cut(s) 322, 333, 357, 769, 831
BsaXI ACNNNNNCTCC 4 cut(s) 482, 512, 1126, 1156
Bsc4I CCNNNNNNNGG 2 cut(s) 358, 554
Bse1I ACTGG 1 cut(s) 787
BseBI CCWGG 2 cut(s) 353, 833
BseDI CCNNGG 5 cut(s) 322, 333, 357, 769, 831
BseGI GGATG 4 cut(s) 71, 740, 774, 1051
BseLI CCNNNNNNNGG 2 cut(s) 358, 554
BseMII CTCAG 3 cut(s) 54, 531, 1026
BseNI ACTGG 1 cut(s) 787
BseRI GAGGAG 5 cut(s) 50, 55, 112, 215, 959
BseXI GCAGC 4 cut(s) 354, 587, 747, 994
BsgI GTGCAG 1 cut(s) 497
Bsh1236I CGCG 3 cut(s) 581, 1061, 1118
BshFI GGCC 7 cut(s) 356, 559, 672, 819, 836, 848, 1042
BshNI GGYRCC 4 cut(s) 296, 326, 544, 1012
BsiHKAI GWGCWC 2 cut(s) 120, 433
BsiHKCI CYCGRG 1 cut(s) 113
BsiSI CCGG 2 cut(s) 1043, 1064
BslFI GGGAC 3 cut(s) 388, 775, 943
BslI CCNNNNNNNGG 2 cut(s) 358, 554
BsmAI GTCTC 3 cut(s) 647, 893, 1107
BsmBI CGTCTC 2 cut(s) 893, 1107
BsmFI GGGAC 3 cut(s) 388, 775, 943
BsnI GGCC 7 cut(s) 356, 559, 672, 819, 836, 848, 1042
Bso31I GGTCTC 1 cut(s) 647
BsoBI CYCGRG 1 cut(s) 113
Bsp1286I GDGCHC 2 cut(s) 120, 433
Bsp143I GATC 7 cut(s) 165, 315, 582, 624, 936, 1067, 1084
BspACI CCGC 9 cut(s) 172, 175, 210, 368, 411, 533, 552, 579, 1118
BspANI GGCC 7 cut(s) 356, 559, 672, 819, 836, 848, 1042
BspCNI CTCAG 3 cut(s) 53, 532, 1027
BspFNI CGCG 3 cut(s) 581, 1061, 1118
BspLI GGNNCC 6 cut(s) 298, 328, 546, 948, 1014, 1041
BspOI GCTAGC 1 cut(s) 342
BspPI GGATC 2 cut(s) 577, 1075
BspT107I GGYRCC 4 cut(s) 296, 326, 544, 1012
BspTNI GGTCTC 1 cut(s) 647
BsrI ACTGG 1 cut(s) 787
BssECI CCNNGG 5 cut(s) 322, 333, 357, 769, 831
BssMI GATC 7 cut(s) 165, 315, 582, 624, 936, 1067, 1084
BssNI GRCGYC 3 cut(s) 545, 696, 1013
BssT1I CCWWGG 1 cut(s) 333
Bst2UI CCWGG 2 cut(s) 353, 833
Bst4CI ACNGT 4 cut(s) 190, 679, 868, 1130
Bst6I CTCTTC 2 cut(s) 53, 59
BstACI GRCGYC 3 cut(s) 545, 696, 1013
BstBAI YACGTR 1 cut(s) 388
BstC8I GCNNGC 3 cut(s) 340, 566, 1017
BstDEI CTNAG 3 cut(s) 40, 540, 1035
BstDSI CCRYGG 3 cut(s) 322, 357, 769
BstF5I GGATG 4 cut(s) 71, 740, 774, 1051
BstFNI CGCG 3 cut(s) 581, 1061, 1118
BstH2I RGCGCY 2 cut(s) 548, 1016
BstHHI GCGC 4 cut(s) 547, 1015, 1021, 1063
BstKTI GATC 7 cut(s) 168, 318, 585, 627, 939, 1070, 1087
BstMAI GTCTC 3 cut(s) 647, 893, 1107
BstMBI GATC 7 cut(s) 165, 315, 582, 624, 936, 1067, 1084
BstMWI GCNNNNNNNGC 4 cut(s) 41, 551, 565, 991
BstNI CCWGG 2 cut(s) 353, 833
BstNSI RCATGY 1 cut(s) 349
BstPAI GACNNNNGTC 1 cut(s) 905
BstSCI CCNGG 3 cut(s) 351, 831, 1063
BstUI CGCG 3 cut(s) 581, 1061, 1118
BstV1I GCAGC 4 cut(s) 354, 587, 747, 994
BstV2I GAAGAC 2 cut(s) 210, 1013
BstX2I RGATCY 1 cut(s) 1067
BstXI CCANNNNNNTGG 1 cut(s) 364
BstYI RGATCY 1 cut(s) 1067
BsuRI GGCC 7 cut(s) 356, 559, 672, 819, 836, 848, 1042
BtgI CCRYGG 3 cut(s) 322, 357, 769
BtsCI GGATG 4 cut(s) 71, 740, 774, 1051
Cac8I GCNNGC 3 cut(s) 340, 566, 1017
CfoI GCGC 4 cut(s) 547, 1015, 1021, 1063
Cfr13I GGNCC 2 cut(s) 557, 1040
CseI GACGC 3 cut(s) 704, 1067, 1124
Csp6I GTAC 3 cut(s) 385, 724, 784
CviAII CATG 3 cut(s) 214, 275, 346
CviQI GTAC 3 cut(s) 385, 724, 784
DdeI CTNAG 3 cut(s) 40, 540, 1035
DinI GGCGCC 2 cut(s) 546, 1014
DpnI GATC 7 cut(s) 167, 317, 584, 626, 938, 1069, 1086
DpnII GATC 7 cut(s) 165, 315, 582, 624, 936, 1067, 1084
DrdI GACNNNNNNGTC 1 cut(s) 884
DriI GACNNNNNGTC 1 cut(s) 242
DseDI GACNNNNNNGTC 1 cut(s) 884
EaeI YGGCCR 1 cut(s) 834
Eam1104I CTCTTC 2 cut(s) 53, 59
Eam1105I GACNNNNNGTC 1 cut(s) 242
EarI CTCTTC 2 cut(s) 53, 59
EciI GGCGGA 1 cut(s) 548
Ecl136II GAGCTC 2 cut(s) 118, 431
Eco130I CCWWGG 1 cut(s) 333
Eco147I AGGCCT 1 cut(s) 672
Eco24I GRGCYC 2 cut(s) 120, 433
Eco31I GGTCTC 1 cut(s) 647
Eco53kI GAGCTC 2 cut(s) 118, 431
Eco88I CYCGRG 1 cut(s) 113
EcoICRI GAGCTC 2 cut(s) 118, 431
EcoRII CCWGG 2 cut(s) 351, 831
EcoT14I CCWWGG 1 cut(s) 333
EcoT38I GRGCYC 2 cut(s) 120, 433
EgeI GGCGCC 2 cut(s) 546, 1014
EheI GGCGCC 2 cut(s) 546, 1014
ErhI CCWWGG 1 cut(s) 333
Esp3I CGTCTC 2 cut(s) 893, 1107
FaeI CATG 3 cut(s) 217, 278, 349
FaqI GGGAC 3 cut(s) 388, 775, 943
FatI CATG 3 cut(s) 213, 274, 345
FauI CCCGC 1 cut(s) 1111
FblI GTMKAC 1 cut(s) 246
Fnu4HI GCNGC 7 cut(s) 175, 210, 343, 369, 601, 761, 983
FokI GGATG 4 cut(s) 58, 727, 761, 1058
FriOI GRGCYC 2 cut(s) 120, 433
Fsp4HI GCNGC 7 cut(s) 175, 210, 343, 369, 601, 761, 983
FspBI CTAG 2 cut(s) 32, 339
GlaI GCGC 4 cut(s) 546, 1014, 1020, 1062
GluI GCNGC 7 cut(s) 175, 210, 343, 369, 601, 761, 983
GsuI CTGGAG 1 cut(s) 779
HaeII RGCGCY 2 cut(s) 548, 1016
HaeIII GGCC 7 cut(s) 356, 559, 672, 819, 836, 848, 1042
HapII CCGG 2 cut(s) 1043, 1064
HgaI GACGC 3 cut(s) 704, 1067, 1124
HhaI GCGC 4 cut(s) 547, 1015, 1021, 1063
Hin1I GRCGYC 3 cut(s) 545, 696, 1013
Hin1II CATG 3 cut(s) 217, 278, 349
Hin6I GCGC 4 cut(s) 545, 1013, 1019, 1061
HinP1I GCGC 4 cut(s) 545, 1013, 1019, 1061
HincII GTYRAC 2 cut(s) 525, 826
HindII GTYRAC 2 cut(s) 525, 826
HinfI GANTC 4 cut(s) 237, 484, 1049, 1076
HpaI GTTAAC 1 cut(s) 525
HpaII CCGG 2 cut(s) 1043, 1064
Hpy166II GTNNAC 6 cut(s) 247, 391, 525, 784, 826, 970
Hpy188I TCNGA 3 cut(s) 428, 1072, 1081
Hpy188III TCNNGA 5 cut(s) 434, 633, 652, 796, 910
Hpy8I GTNNAC 6 cut(s) 247, 391, 525, 784, 826, 970
Hpy99I CGWCG 3 cut(s) 694, 944, 991
HpyAV CCTTC 4 cut(s) 136, 469, 619, 658
HpyCH4III ACNGT 4 cut(s) 190, 679, 868, 1130
HpyCH4IV ACGT 2 cut(s) 387, 932
HpyCH4V TGCA 4 cut(s) 478, 508, 603, 982
HpyF10VI GCNNNNNNNGC 4 cut(s) 41, 551, 565, 991
HpyF3I CTNAG 3 cut(s) 40, 540, 1035
HpySE526I ACGT 2 cut(s) 387, 932
Hsp92I GRCGYC 3 cut(s) 545, 696, 1013
Hsp92II CATG 3 cut(s) 217, 278, 349
HspAI GCGC 4 cut(s) 545, 1013, 1019, 1061
KasI GGCGCC 2 cut(s) 544, 1012
KspAI GTTAAC 1 cut(s) 525
Kzo9I GATC 7 cut(s) 165, 315, 582, 624, 936, 1067, 1084
LmnI GCTCC 4 cut(s) 428, 635, 946, 991
Lsp1109I GCAGC 4 cut(s) 354, 587, 747, 994
LweI GCATC 2 cut(s) 783, 789
MaeI CTAG 2 cut(s) 32, 339
MaeII ACGT 2 cut(s) 387, 932
MaeIII GTNAC 1 cut(s) 910
MalI GATC 7 cut(s) 167, 317, 584, 626, 938, 1069, 1086
MboI GATC 7 cut(s) 165, 315, 582, 624, 936, 1067, 1084
MboII GAAGA 5 cut(s) 40, 46, 210, 931, 1018
MflI RGATCY 1 cut(s) 1067
MhlI GDGCHC 2 cut(s) 120, 433
MlsI TGGCCA 1 cut(s) 836
MluCI AATT 1 cut(s) 454
MluNI TGGCCA 1 cut(s) 836
Mly113I GGCGCC 2 cut(s) 545, 1013
MlyI GAGTC 1 cut(s) 231
MmeI TCCRAC 1 cut(s) 834
Mox20I TGGCCA 1 cut(s) 836
MscI TGGCCA 1 cut(s) 836
MseI TTAA 1 cut(s) 524
MslI CAYNNNNRTG 2 cut(s) 362, 779
Msp20I TGGCCA 1 cut(s) 836
MspA1I CMGCKG 1 cut(s) 568
MspI CCGG 2 cut(s) 1043, 1064
MspR9I CCNGG 3 cut(s) 353, 833, 1065
MvaI CCWGG 2 cut(s) 353, 833
MvnI CGCG 3 cut(s) 581, 1061, 1118
MwoI GCNNNNNNNGC 4 cut(s) 41, 551, 565, 991
NarI GGCGCC 2 cut(s) 545, 1013
NciI CCSGG 1 cut(s) 1065
NdeII GATC 7 cut(s) 165, 315, 582, 624, 936, 1067, 1084
NheI GCTAGC 1 cut(s) 338
NlaIII CATG 3 cut(s) 217, 278, 349
NlaIV GGNNCC 6 cut(s) 298, 328, 546, 948, 1014, 1041
NmuCI GTSAC 1 cut(s) 910
NspI RCATGY 1 cut(s) 349
OliI CACNNNNGTG 1 cut(s) 362
PceI AGGCCT 1 cut(s) 672
PcsI WCGNNNNNNNCGW 3 cut(s) 777, 864, 885
PfeI GAWTC 3 cut(s) 484, 1049, 1076
PflFI GACNNNGTC 1 cut(s) 698
PkrI GCNGC 7 cut(s) 176, 211, 344, 370, 602, 762, 984
PleI GAGTC 1 cut(s) 231
PluTI GGCGCC 2 cut(s) 548, 1016
PpsI GAGTC 1 cut(s) 231
Ppu21I YACGTR 1 cut(s) 388
PshAI GACNNNNGTC 1 cut(s) 905
Psp124BI GAGCTC 2 cut(s) 120, 433
Psp6I CCWGG 2 cut(s) 351, 831
PspGI CCWGG 2 cut(s) 351, 831
PspN4I GGNNCC 6 cut(s) 298, 328, 546, 948, 1014, 1041
PspPI GGNCC 2 cut(s) 557, 1040
PsuI RGATCY 1 cut(s) 1067
PsyI GACNNNGTC 1 cut(s) 698
PvuII CAGCTG 1 cut(s) 568
RsaI GTAC 3 cut(s) 386, 725, 785
RsaNI GTAC 3 cut(s) 385, 724, 784
RseI CAYNNNNRTG 2 cut(s) 362, 779
SacI GAGCTC 2 cut(s) 120, 433
SaqAI TTAA 1 cut(s) 524
SatI GCNGC 7 cut(s) 175, 210, 343, 369, 601, 761, 983
Sau3AI GATC 7 cut(s) 165, 315, 582, 624, 936, 1067, 1084
Sau96I GGNCC 2 cut(s) 557, 1040
SchI GAGTC 1 cut(s) 231
ScrFI CCNGG 3 cut(s) 353, 833, 1065
SduI GDGCHC 2 cut(s) 120, 433
SfaNI GCATC 2 cut(s) 783, 789
SfoI GGCGCC 2 cut(s) 546, 1014
SmiMI CAYNNNNRTG 2 cut(s) 362, 779
SmlI CTYRAG 3 cut(s) 404, 432, 803
SmoI CTYRAG 3 cut(s) 404, 432, 803
Sse9I AATT 1 cut(s) 454
SseBI AGGCCT 1 cut(s) 672
SsiI CCGC 9 cut(s) 172, 175, 210, 368, 411, 533, 552, 579, 1118
SspDI GGCGCC 2 cut(s) 544, 1012
SspMI CTAG 2 cut(s) 32, 339
SstI GAGCTC 2 cut(s) 120, 433
StuI AGGCCT 1 cut(s) 672
StyD4I CCNGG 3 cut(s) 351, 831, 1063
StyI CCWWGG 1 cut(s) 333
TaaI ACNGT 4 cut(s) 190, 679, 868, 1130
TaiI ACGT 2 cut(s) 390, 935
TaqI TCGA 4 cut(s) 201, 651, 858, 939
TasI AATT 1 cut(s) 454
TatI WGTACW 1 cut(s) 723
TauI GCSGC 3 cut(s) 177, 212, 371
TfiI GAWTC 3 cut(s) 484, 1049, 1076
Tru1I TTAA 1 cut(s) 524
Tru9I TTAA 1 cut(s) 524
TseFI GTSAC 1 cut(s) 910
TseI GCWGC 4 cut(s) 342, 600, 760, 982
Tsp45I GTSAC 1 cut(s) 910
TspGWI ACGGA 5 cut(s) 490, 681, 707, 917, 1004
Tth111I GACNNNGTC 1 cut(s) 698
XceI RCATGY 1 cut(s) 349
XmiI GTMKAC 1 cut(s) 246
XspI CTAG 2 cut(s) 32, 339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.