U3 small nucleolar ribonucleoprotein protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15750 |
| fragaria_vesca | FvH4_6g46310 |
| malus_domestica | MD09G1075700.v1.1 MD17G1066400.v1.1 |
| prunus_persica | Prupe.3G248300_v2.0.a1 |
| pyrus_communis | pycom09g00310 pycom17g06690 |
| rosa_chinensis | RchiOBHm_Chr2g0164761 |
| rosa_laevigata | RLG00000021483 |
| rosa_multiflora | Rmu_sc0000946.1_g000017 |
| rosa_roxburghii | Rroxscaffold_2G00086320 |
| rosa_rugosa | Rorug02G0510000 |
| rosa_samantha | Rh2AG578300 Rh2BG589400 Rh2CG560000 Rh2DG599800 |
| rosa_wichuraiana | Rw2G048010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 129 |
| AccB1I | GGYRCC | 1 cut(s) | 396 |
| AclI | AACGTT | 1 cut(s) | 100 |
| AcuI | CTGAAG | 2 cut(s) | 32, 386 |
| AfaI | GTAC | 2 cut(s) | 245, 512 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 370 |
| AgeI | ACCGGT | 1 cut(s) | 113 |
| AgsI | TTSAA | 5 cut(s) | 37, 181, 215, 330, 349 |
| AjnI | CCWGG | 1 cut(s) | 87 |
| AluBI | AGCT | 5 cut(s) | 10, 31, 166, 241, 276 |
| AluI | AGCT | 5 cut(s) | 10, 31, 166, 241, 276 |
| Alw21I | GWGCWC | 1 cut(s) | 363 |
| Alw26I | GTCTC | 1 cut(s) | 410 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 94, 166, 419 |
| AsiGI | ACCGGT | 1 cut(s) | 113 |
| AspS9I | GGNCC | 2 cut(s) | 340, 410 |
| AsuHPI | GGTGA | 2 cut(s) | 103, 181 |
| AvaII | GGWCC | 2 cut(s) | 340, 410 |
| BaeGI | GKGCMC | 1 cut(s) | 399 |
| BanI | GGYRCC | 1 cut(s) | 396 |
| BauI | CACGAG | 1 cut(s) | 20 |
| BbsI | GAAGAC | 1 cut(s) | 465 |
| Bbv12I | GWGCWC | 1 cut(s) | 363 |
| BccI | CCATC | 2 cut(s) | 148, 271 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 518 |
| BciT130I | CCWGG | 1 cut(s) | 89 |
| BclI | TGATCA | 1 cut(s) | 289 |
| BcoDI | GTCTC | 1 cut(s) | 410 |
| BfaI | CTAG | 1 cut(s) | 440 |
| BlpI | GCTNAGC | 1 cut(s) | 357 |
| Bme1390I | CCNGG | 1 cut(s) | 89 |
| Bme18I | GGWCC | 2 cut(s) | 340, 410 |
| BmgT120I | GGNCC | 2 cut(s) | 340, 410 |
| BmiI | GGNNCC | 1 cut(s) | 398 |
| BmrFI | CCNGG | 1 cut(s) | 89 |
| BmsI | GCATC | 1 cut(s) | 526 |
| BpiI | GAAGAC | 1 cut(s) | 465 |
| BpmI | CTGGAG | 1 cut(s) | 527 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 357 |
| BsaJI | CCNNGG | 1 cut(s) | 87 |
| BsaWI | WCCGGW | 1 cut(s) | 113 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 370 |
| Bse118I | RCCGGY | 1 cut(s) | 113 |
| Bse3DI | GCAATG | 1 cut(s) | 546 |
| BseBI | CCWGG | 1 cut(s) | 89 |
| BseDI | CCNNGG | 1 cut(s) | 87 |
| BseGI | GGATG | 3 cut(s) | 159, 263, 305 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 370 |
| BseMI | GCAATG | 1 cut(s) | 546 |
| BseMII | CTCAG | 1 cut(s) | 348 |
| BseSI | GKGCMC | 1 cut(s) | 399 |
| BseYI | CCCAGC | 1 cut(s) | 430 |
| BsgI | GTGCAG | 1 cut(s) | 179 |
| Bsh1285I | CGRYCG | 1 cut(s) | 118 |
| BshNI | GGYRCC | 1 cut(s) | 396 |
| BshTI | ACCGGT | 1 cut(s) | 113 |
| BsiEI | CGRYCG | 1 cut(s) | 118 |
| BsiHKAI | GWGCWC | 1 cut(s) | 363 |
| BsiSI | CCGG | 2 cut(s) | 114, 151 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 370 |
| BsmAI | GTCTC | 1 cut(s) | 410 |
| BsmI | GAATGC | 1 cut(s) | 434 |
| Bsp1286I | GDGCHC | 2 cut(s) | 363, 399 |
| Bsp1407I | TGTACA | 1 cut(s) | 243 |
| Bsp143I | GATC | 1 cut(s) | 289 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 357 |
| BspCNI | CTCAG | 1 cut(s) | 349 |
| BspLI | GGNNCC | 1 cut(s) | 398 |
| BspT107I | GGYRCC | 1 cut(s) | 396 |
| BsrDI | GCAATG | 1 cut(s) | 546 |
| BsrFI | RCCGGY | 1 cut(s) | 113 |
| BsrGI | TGTACA | 1 cut(s) | 243 |
| BssAI | RCCGGY | 1 cut(s) | 113 |
| BssECI | CCNNGG | 1 cut(s) | 87 |
| BssMI | GATC | 1 cut(s) | 289 |
| BssSI | CACGAG | 1 cut(s) | 20 |
| Bst2BI | CACGAG | 1 cut(s) | 20 |
| Bst2UI | CCWGG | 1 cut(s) | 89 |
| Bst4CI | ACNGT | 2 cut(s) | 334, 421 |
| Bst6I | CTCTTC | 1 cut(s) | 56 |
| BstAUI | TGTACA | 1 cut(s) | 243 |
| BstDEI | CTNAG | 1 cut(s) | 357 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 368 |
| BstF5I | GGATG | 3 cut(s) | 159, 263, 305 |
| BstKTI | GATC | 1 cut(s) | 292 |
| BstMAI | GTCTC | 1 cut(s) | 410 |
| BstMBI | GATC | 1 cut(s) | 289 |
| BstMCI | CGRYCG | 1 cut(s) | 118 |
| BstNI | CCWGG | 1 cut(s) | 89 |
| BstSCI | CCNGG | 1 cut(s) | 87 |
| BstSLI | GKGCMC | 1 cut(s) | 399 |
| BstV2I | GAAGAC | 1 cut(s) | 465 |
| BtsCI | GGATG | 3 cut(s) | 159, 263, 305 |
| CaiI | CAGNNNCTG | 3 cut(s) | 94, 166, 419 |
| Cfr10I | RCCGGY | 1 cut(s) | 113 |
| Cfr13I | GGNCC | 2 cut(s) | 340, 410 |
| Csp6I | GTAC | 2 cut(s) | 244, 511 |
| CspAI | ACCGGT | 1 cut(s) | 113 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 318, 353 |
| CviAII | CATG | 2 cut(s) | 107, 471 |
| CviJI | RGCY | 8 cut(s) | 10, 31, 86, 166, 241, 276, 325, 374 |
| CviKI_1 | RGCY | 8 cut(s) | 10, 31, 86, 166, 241, 276, 325, 374 |
| CviQI | GTAC | 2 cut(s) | 244, 511 |
| DdeI | CTNAG | 1 cut(s) | 357 |
| DpnI | GATC | 1 cut(s) | 291 |
| DpnII | GATC | 1 cut(s) | 289 |
| Eam1104I | CTCTTC | 1 cut(s) | 56 |
| EarI | CTCTTC | 1 cut(s) | 56 |
| Eco47I | GGWCC | 2 cut(s) | 340, 410 |
| Eco57I | CTGAAG | 2 cut(s) | 32, 386 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 368 |
| EcoRII | CCWGG | 1 cut(s) | 87 |
| FaeI | CATG | 2 cut(s) | 110, 474 |
| FaiI | YATR | 9 cut(s) | 108, 129, 148, 176, 227, 382, 455, 472, 534 |
| FatI | CATG | 2 cut(s) | 106, 470 |
| FbaI | TGATCA | 1 cut(s) | 289 |
| FokI | GGATG | 3 cut(s) | 166, 250, 292 |
| FspBI | CTAG | 1 cut(s) | 440 |
| GsaI | CCCAGC | 1 cut(s) | 434 |
| GsuI | CTGGAG | 1 cut(s) | 527 |
| HapII | CCGG | 2 cut(s) | 114, 151 |
| Hin1II | CATG | 2 cut(s) | 110, 474 |
| HindIII | AAGCTT | 1 cut(s) | 274 |
| HinfI | GANTC | 1 cut(s) | 479 |
| HpaII | CCGG | 2 cut(s) | 114, 151 |
| HphI | GGTGA | 2 cut(s) | 103, 181 |
| Hpy166II | GTNNAC | 2 cut(s) | 46, 172 |
| Hpy188I | TCNGA | 3 cut(s) | 210, 344, 404 |
| Hpy188III | TCNNGA | 5 cut(s) | 20, 119, 267, 413, 506 |
| Hpy8I | GTNNAC | 2 cut(s) | 46, 172 |
| HpyAV | CCTTC | 2 cut(s) | 62, 361 |
| HpyCH4III | ACNGT | 2 cut(s) | 334, 421 |
| HpyCH4IV | ACGT | 2 cut(s) | 100, 319 |
| HpyCH4V | TGCA | 4 cut(s) | 97, 160, 315, 539 |
| HpyF3I | CTNAG | 1 cut(s) | 357 |
| HpySE526I | ACGT | 2 cut(s) | 100, 319 |
| Hsp92II | CATG | 2 cut(s) | 110, 474 |
| Ksp22I | TGATCA | 1 cut(s) | 289 |
| Kzo9I | GATC | 1 cut(s) | 289 |
| LweI | GCATC | 1 cut(s) | 526 |
| MaeI | CTAG | 1 cut(s) | 440 |
| MaeII | ACGT | 2 cut(s) | 100, 319 |
| MaeIII | GTNAC | 8 cut(s) | 74, 101, 109, 119, 376, 421, 442, 466 |
| MalI | GATC | 1 cut(s) | 291 |
| MboI | GATC | 1 cut(s) | 289 |
| MboII | GAAGA | 4 cut(s) | 37, 49, 73, 470 |
| MhlI | GDGCHC | 2 cut(s) | 363, 399 |
| MmeI | TCCRAC | 1 cut(s) | 504 |
| MnlI | CCTC | 3 cut(s) | 65, 364, 410 |
| MspI | CCGG | 2 cut(s) | 114, 151 |
| MspR9I | CCNGG | 1 cut(s) | 89 |
| Mva1269I | GAATGC | 1 cut(s) | 434 |
| MvaI | CCWGG | 1 cut(s) | 89 |
| NdeII | GATC | 1 cut(s) | 289 |
| NlaIII | CATG | 2 cut(s) | 110, 474 |
| NlaIV | GGNNCC | 1 cut(s) | 398 |
| NmuCI | GTSAC | 5 cut(s) | 74, 109, 119, 376, 442 |
| PctI | GAATGC | 1 cut(s) | 434 |
| PfeI | GAWTC | 1 cut(s) | 479 |
| PinAI | ACCGGT | 1 cut(s) | 113 |
| PsiI | TTATAA | 1 cut(s) | 129 |
| Psp1406I | AACGTT | 1 cut(s) | 100 |
| Psp6I | CCWGG | 1 cut(s) | 87 |
| PspFI | CCCAGC | 1 cut(s) | 430 |
| PspGI | CCWGG | 1 cut(s) | 87 |
| PspN4I | GGNNCC | 1 cut(s) | 398 |
| PspPI | GGNCC | 2 cut(s) | 340, 410 |
| PstNI | CAGNNNCTG | 3 cut(s) | 94, 166, 419 |
| RsaI | GTAC | 2 cut(s) | 245, 512 |
| RsaNI | GTAC | 2 cut(s) | 244, 511 |
| Sau3AI | GATC | 1 cut(s) | 289 |
| Sau96I | GGNCC | 2 cut(s) | 340, 410 |
| ScrFI | CCNGG | 1 cut(s) | 89 |
| SduI | GDGCHC | 2 cut(s) | 363, 399 |
| SfaNI | GCATC | 1 cut(s) | 526 |
| SinI | GGWCC | 2 cut(s) | 340, 410 |
| SspI | AATATT | 1 cut(s) | 137 |
| SspMI | CTAG | 1 cut(s) | 440 |
| StyD4I | CCNGG | 1 cut(s) | 87 |
| TaaI | ACNGT | 2 cut(s) | 334, 421 |
| TaiI | ACGT | 2 cut(s) | 103, 322 |
| TaqII | GACCGA | 1 cut(s) | 236 |
| TatI | WGTACW | 2 cut(s) | 243, 510 |
| TfiI | GAWTC | 1 cut(s) | 479 |
| TseFI | GTSAC | 5 cut(s) | 74, 109, 119, 376, 442 |
| Tsp45I | GTSAC | 5 cut(s) | 74, 109, 119, 376, 442 |
| TspDTI | ATGAA | 2 cut(s) | 203, 471 |
| TspGWI | ACGGA | 1 cut(s) | 289 |
| VpaK11BI | GGWCC | 2 cut(s) | 340, 410 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 368 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 274 |
| XspI | CTAG | 1 cut(s) | 440 |