No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G02120 |
| fragaria_vesca | FvH4_6g46850 |
| malus_domestica | MD09G1066800.v1.1 MD17G1059700.v1.1 |
| prunus_persica | Prupe.3G254900_v2.0.a1 |
| pyrus_communis | pycom111g05610 pycom17g05940 |
| rosa_chinensis | RchiOBHm_Chr2g0165841 |
| rosa_laevigata | RLG00000021561 |
| rosa_multiflora | Rmu_sc0008709.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00085450 |
| rosa_rugosa | Rorug02G0518300 |
| rosa_samantha | Rh2AG583900 Rh2BG596000 Rh2CG566800 Rh2DG605800 |
| rosa_wichuraiana | Rw2G048700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 272 |
| AcsI | RAATTY | 2 cut(s) | 115, 358 |
| AcuI | CTGAAG | 1 cut(s) | 333 |
| AfaI | GTAC | 2 cut(s) | 191, 203 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 106 |
| AgsI | TTSAA | 3 cut(s) | 44, 187, 358 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 345, 377 |
| AluBI | AGCT | 1 cut(s) | 329 |
| AluI | AGCT | 1 cut(s) | 329 |
| AoxI | GGCC | 1 cut(s) | 244 |
| ApeKI | GCWGC | 1 cut(s) | 326 |
| ApoI | RAATTY | 2 cut(s) | 115, 358 |
| AspS9I | GGNCC | 2 cut(s) | 341, 366 |
| AvaII | GGWCC | 2 cut(s) | 341, 366 |
| BaeGI | GKGCMC | 1 cut(s) | 277 |
| BanI | GGYRCC | 1 cut(s) | 272 |
| BbvI | GCAGC | 1 cut(s) | 338 |
| BfaI | CTAG | 1 cut(s) | 288 |
| BisI | GCNGC | 1 cut(s) | 327 |
| BlsI | GCNGC | 1 cut(s) | 328 |
| Bme18I | GGWCC | 2 cut(s) | 341, 366 |
| BmgT120I | GGNCC | 2 cut(s) | 341, 366 |
| BmiI | GGNNCC | 2 cut(s) | 274, 367 |
| BsaJI | CCNNGG | 1 cut(s) | 177 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 81, 111 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 106 |
| BseDI | CCNNGG | 1 cut(s) | 177 |
| BseGI | GGATG | 2 cut(s) | 115, 341 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BseRI | GAGGAG | 1 cut(s) | 15 |
| BseSI | GKGCMC | 1 cut(s) | 277 |
| BseXI | GCAGC | 1 cut(s) | 338 |
| BshFI | GGCC | 1 cut(s) | 246 |
| BshNI | GGYRCC | 1 cut(s) | 272 |
| BsiSI | CCGG | 1 cut(s) | 129 |
| BslFI | GGGAC | 2 cut(s) | 158, 214 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BsmFI | GGGAC | 2 cut(s) | 158, 214 |
| BsmI | GAATGC | 1 cut(s) | 182 |
| BsnI | GGCC | 1 cut(s) | 246 |
| Bsp1286I | GDGCHC | 1 cut(s) | 277 |
| Bsp143I | GATC | 2 cut(s) | 160, 217 |
| BspANI | GGCC | 1 cut(s) | 246 |
| BspLI | GGNNCC | 2 cut(s) | 274, 367 |
| BspT107I | GGYRCC | 1 cut(s) | 272 |
| BssECI | CCNNGG | 1 cut(s) | 177 |
| BssMI | GATC | 2 cut(s) | 160, 217 |
| BssT1I | CCWWGG | 1 cut(s) | 177 |
| BstF5I | GGATG | 2 cut(s) | 115, 341 |
| BstKTI | GATC | 2 cut(s) | 163, 220 |
| BstMBI | GATC | 2 cut(s) | 160, 217 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 19 |
| BstSLI | GKGCMC | 1 cut(s) | 277 |
| BstV1I | GCAGC | 1 cut(s) | 338 |
| BsuRI | GGCC | 1 cut(s) | 246 |
| BtsCI | GGATG | 2 cut(s) | 115, 341 |
| Cfr13I | GGNCC | 2 cut(s) | 341, 366 |
| Csp6I | GTAC | 2 cut(s) | 190, 202 |
| CviJI | RGCY | 6 cut(s) | 13, 36, 210, 246, 307, 329 |
| CviKI_1 | RGCY | 6 cut(s) | 13, 36, 210, 246, 307, 329 |
| CviQI | GTAC | 2 cut(s) | 190, 202 |
| DpnI | GATC | 2 cut(s) | 162, 219 |
| DpnII | GATC | 2 cut(s) | 160, 217 |
| Eco130I | CCWWGG | 1 cut(s) | 177 |
| Eco147I | AGGCCT | 1 cut(s) | 246 |
| Eco47I | GGWCC | 2 cut(s) | 341, 366 |
| Eco57I | CTGAAG | 1 cut(s) | 333 |
| EcoT14I | CCWWGG | 1 cut(s) | 177 |
| ErhI | CCWWGG | 1 cut(s) | 177 |
| FaiI | YATR | 1 cut(s) | 77 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 234, 266 |
| FaqI | GGGAC | 2 cut(s) | 158, 214 |
| Fnu4HI | GCNGC | 1 cut(s) | 327 |
| FokI | GGATG | 2 cut(s) | 122, 348 |
| Fsp4HI | GCNGC | 1 cut(s) | 327 |
| FspBI | CTAG | 1 cut(s) | 288 |
| GluI | GCNGC | 1 cut(s) | 327 |
| HaeIII | GGCC | 1 cut(s) | 246 |
| HapII | CCGG | 1 cut(s) | 129 |
| HinfI | GANTC | 1 cut(s) | 314 |
| HpaII | CCGG | 1 cut(s) | 129 |
| Hpy166II | GTNNAC | 1 cut(s) | 204 |
| Hpy188I | TCNGA | 4 cut(s) | 52, 70, 222, 352 |
| Hpy188III | TCNNGA | 1 cut(s) | 318 |
| Hpy8I | GTNNAC | 1 cut(s) | 204 |
| HpyAV | CCTTC | 1 cut(s) | 257 |
| HpyCH4V | TGCA | 2 cut(s) | 75, 326 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 19 |
| Kzo9I | GATC | 2 cut(s) | 160, 217 |
| LpnPI | CCDG | 8 cut(s) | 27, 142, 171, 207, 246, 268, 303, 357 |
| Lsp1109I | GCAGC | 1 cut(s) | 338 |
| MaeI | CTAG | 1 cut(s) | 288 |
| MaeIII | GTNAC | 1 cut(s) | 235 |
| MalI | GATC | 2 cut(s) | 162, 219 |
| MboI | GATC | 2 cut(s) | 160, 217 |
| MhlI | GDGCHC | 1 cut(s) | 277 |
| MluCI | AATT | 5 cut(s) | 17, 39, 115, 353, 358 |
| MmeI | TCCRAC | 1 cut(s) | 124 |
| MnlI | CCTC | 4 cut(s) | 33, 36, 102, 287 |
| MseI | TTAA | 1 cut(s) | 168 |
| MslI | CAYNNNNRTG | 1 cut(s) | 108 |
| MspA1I | CMGCKG | 1 cut(s) | 329 |
| MspI | CCGG | 1 cut(s) | 129 |
| Mva1269I | GAATGC | 1 cut(s) | 182 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 19 |
| NdeII | GATC | 2 cut(s) | 160, 217 |
| NlaIV | GGNNCC | 2 cut(s) | 274, 367 |
| PceI | AGGCCT | 1 cut(s) | 246 |
| PctI | GAATGC | 1 cut(s) | 182 |
| PfeI | GAWTC | 1 cut(s) | 314 |
| PkrI | GCNGC | 1 cut(s) | 328 |
| PspN4I | GGNNCC | 2 cut(s) | 274, 367 |
| PspPI | GGNCC | 2 cut(s) | 341, 366 |
| PvuII | CAGCTG | 1 cut(s) | 329 |
| RsaI | GTAC | 2 cut(s) | 191, 203 |
| RsaNI | GTAC | 2 cut(s) | 190, 202 |
| RseI | CAYNNNNRTG | 1 cut(s) | 108 |
| SaqAI | TTAA | 1 cut(s) | 168 |
| SatI | GCNGC | 1 cut(s) | 327 |
| Sau3AI | GATC | 2 cut(s) | 160, 217 |
| Sau96I | GGNCC | 2 cut(s) | 341, 366 |
| SduI | GDGCHC | 1 cut(s) | 277 |
| SetI | ASST | 4 cut(s) | 94, 203, 289, 331 |
| SinI | GGWCC | 2 cut(s) | 341, 366 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 108 |
| Sse9I | AATT | 5 cut(s) | 17, 39, 115, 353, 358 |
| SseBI | AGGCCT | 1 cut(s) | 246 |
| SspMI | CTAG | 1 cut(s) | 288 |
| StuI | AGGCCT | 1 cut(s) | 246 |
| StyI | CCWWGG | 1 cut(s) | 177 |
| TasI | AATT | 5 cut(s) | 17, 39, 115, 353, 358 |
| TfiI | GAWTC | 1 cut(s) | 314 |
| Tru1I | TTAA | 1 cut(s) | 168 |
| Tru9I | TTAA | 1 cut(s) | 168 |
| TseI | GCWGC | 1 cut(s) | 326 |
| TspDTI | ATGAA | 2 cut(s) | 74, 126 |
| VpaK11BI | GGWCC | 2 cut(s) | 341, 366 |
| XapI | RAATTY | 2 cut(s) | 115, 358 |
| XspI | CTAG | 1 cut(s) | 288 |