Shaggy-related protein kinase epsilon
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G14640 AT5G14640 |
| fragaria_vesca | FvH4_6g50970 FvH4_6g50970 |
| malus_domestica | MD09G1030000.v1.1 |
| prunus_persica | Prupe.3G287300_v2.0.a1 Prupe.3G287300_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0172371 |
| rosa_laevigata | RLG00000022108 |
| rosa_multiflora | Rmu_sc0000467.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00079940 |
| rosa_rugosa | Rorug02G0558800 Rorug02G0558800 |
| rosa_samantha | Rh2AG634000 Rh2BG647700 Rh2CG614700 Rh2DG662500 |
| rosa_wichuraiana | Rw2G052510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1110 |
| AciI | CCGC | 2 cut(s) | 502, 602 |
| AclWI | GGATC | 1 cut(s) | 1079 |
| AcoI | YGGCCR | 1 cut(s) | 157 |
| AcsI | RAATTY | 2 cut(s) | 920, 926 |
| AcuI | CTGAAG | 2 cut(s) | 998, 1172 |
| AcyI | GRCGYC | 1 cut(s) | 1111 |
| AfaI | GTAC | 3 cut(s) | 16, 453, 867 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 501 |
| AgsI | TTSAA | 5 cut(s) | 405, 446, 925, 1132, 1138 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 772 |
| AjnI | CCWGG | 2 cut(s) | 669, 823 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 789, 821 |
| Alw21I | GWGCWC | 3 cut(s) | 426, 553, 724 |
| Alw26I | GTCTC | 3 cut(s) | 452, 585, 1103 |
| AlwI | GGATC | 1 cut(s) | 1079 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 23, 817 |
| Ama87I | CYCGRG | 1 cut(s) | 1046 |
| AoxI | GGCC | 2 cut(s) | 157, 1050 |
| ApeKI | GCWGC | 3 cut(s) | 20, 23, 32 |
| ApoI | RAATTY | 2 cut(s) | 920, 926 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 340, 372 |
| AseI | ATTAAT | 1 cut(s) | 87 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 801 |
| AspLEI | GCGC | 2 cut(s) | 975, 1113 |
| AsuHPI | GGTGA | 3 cut(s) | 145, 839, 938 |
| AvaI | CYCGRG | 1 cut(s) | 1046 |
| BalI | TGGCCA | 1 cut(s) | 159 |
| BanI | GGYRCC | 1 cut(s) | 1110 |
| BanII | GRGCYC | 2 cut(s) | 426, 553 |
| BauI | CACGAG | 1 cut(s) | 882 |
| Bbv12I | GWGCWC | 3 cut(s) | 426, 553, 724 |
| BbvI | GCAGC | 3 cut(s) | 10, 19, 32 |
| BccI | CCATC | 1 cut(s) | 375 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1027, 1061 |
| BciT130I | CCWGG | 2 cut(s) | 671, 825 |
| BclI | TGATCA | 2 cut(s) | 841, 1072 |
| BcoDI | GTCTC | 3 cut(s) | 452, 585, 1103 |
| BfaI | CTAG | 4 cut(s) | 45, 278, 1220, 1228 |
| BfmI | CTRYAG | 1 cut(s) | 484 |
| BfoI | RGCGCY | 1 cut(s) | 1114 |
| BglII | AGATCT | 1 cut(s) | 994 |
| BisI | GCNGC | 4 cut(s) | 21, 24, 33, 602 |
| BlsI | GCNGC | 4 cut(s) | 22, 25, 34, 603 |
| Bme1390I | CCNGG | 2 cut(s) | 671, 825 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 772 |
| BmeT110I | CYCGRG | 1 cut(s) | 1046 |
| BmiI | GGNNCC | 1 cut(s) | 1112 |
| BmrFI | CCNGG | 2 cut(s) | 671, 825 |
| BmrI | ACTGGG | 1 cut(s) | 878 |
| BmsI | GCATC | 2 cut(s) | 495, 1025 |
| BmuI | ACTGGG | 1 cut(s) | 878 |
| BpmI | CTGGAG | 1 cut(s) | 306 |
| Bpu10I | CCTNAGC | 2 cut(s) | 726, 1191 |
| BpuEI | CTTGAG | 1 cut(s) | 1128 |
| BsaHI | GRCGYC | 1 cut(s) | 1111 |
| BsaJI | CCNNGG | 3 cut(s) | 408, 823, 950 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 279, 309 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 501 |
| Bse1I | ACTGG | 3 cut(s) | 160, 289, 873 |
| Bse3DI | GCAATG | 1 cut(s) | 148 |
| BseBI | CCWGG | 2 cut(s) | 671, 825 |
| BseDI | CCNNGG | 3 cut(s) | 408, 823, 950 |
| BseGI | GGATG | 3 cut(s) | 367, 424, 510 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 501 |
| BseMI | GCAATG | 1 cut(s) | 148 |
| BseMII | CTCAG | 3 cut(s) | 447, 717, 1182 |
| BseNI | ACTGG | 3 cut(s) | 160, 289, 873 |
| BseRI | GAGGAG | 1 cut(s) | 1113 |
| BseXI | GCAGC | 3 cut(s) | 10, 19, 32 |
| Bsh1285I | CGRYCG | 1 cut(s) | 180 |
| BshFI | GGCC | 2 cut(s) | 159, 1052 |
| BshNI | GGYRCC | 1 cut(s) | 1110 |
| BsiEI | CGRYCG | 1 cut(s) | 180 |
| BsiHKAI | GWGCWC | 3 cut(s) | 426, 553, 724 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1046 |
| BsiSI | CCGG | 1 cut(s) | 29 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 501 |
| BsmAI | GTCTC | 3 cut(s) | 452, 585, 1103 |
| BsmBI | CGTCTC | 1 cut(s) | 1103 |
| BsnI | GGCC | 2 cut(s) | 159, 1052 |
| BsoBI | CYCGRG | 1 cut(s) | 1046 |
| Bsp1286I | GDGCHC | 3 cut(s) | 426, 553, 724 |
| Bsp143I | GATC | 6 cut(s) | 99, 177, 841, 994, 1072, 1084 |
| BspACI | CCGC | 2 cut(s) | 502, 602 |
| BspANI | GGCC | 2 cut(s) | 159, 1052 |
| BspCNI | CTCAG | 3 cut(s) | 448, 718, 1183 |
| BspLI | GGNNCC | 1 cut(s) | 1112 |
| BspPI | GGATC | 1 cut(s) | 1079 |
| BspT107I | GGYRCC | 1 cut(s) | 1110 |
| BsrDI | GCAATG | 1 cut(s) | 148 |
| BsrI | ACTGG | 3 cut(s) | 160, 289, 873 |
| BssECI | CCNNGG | 3 cut(s) | 408, 823, 950 |
| BssMI | GATC | 6 cut(s) | 99, 177, 841, 994, 1072, 1084 |
| BssNI | GRCGYC | 1 cut(s) | 1111 |
| BssSI | CACGAG | 1 cut(s) | 882 |
| BssT1I | CCWWGG | 1 cut(s) | 950 |
| Bst2BI | CACGAG | 1 cut(s) | 882 |
| Bst2UI | CCWGG | 2 cut(s) | 671, 825 |
| Bst4CI | ACNGT | 2 cut(s) | 295, 463 |
| BstACI | GRCGYC | 1 cut(s) | 1111 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 352 |
| BstC8I | GCNNGC | 3 cut(s) | 683, 977, 1197 |
| BstDEI | CTNAG | 4 cut(s) | 456, 726, 1031, 1191 |
| BstDSI | CCRYGG | 1 cut(s) | 408 |
| BstF5I | GGATG | 3 cut(s) | 367, 424, 510 |
| BstH2I | RGCGCY | 1 cut(s) | 1114 |
| BstHHI | GCGC | 2 cut(s) | 975, 1113 |
| BstKTI | GATC | 6 cut(s) | 102, 180, 844, 997, 1075, 1087 |
| BstMAI | GTCTC | 3 cut(s) | 452, 585, 1103 |
| BstMBI | GATC | 6 cut(s) | 99, 177, 841, 994, 1072, 1084 |
| BstMCI | CGRYCG | 1 cut(s) | 180 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 17, 29, 32, 352, 1049, 1117, 1147 |
| BstNI | CCWGG | 2 cut(s) | 671, 825 |
| BstNSI | RCATGY | 2 cut(s) | 979, 1199 |
| BstSCI | CCNGG | 2 cut(s) | 669, 823 |
| BstSFI | CTRYAG | 1 cut(s) | 484 |
| BstV1I | GCAGC | 3 cut(s) | 10, 19, 32 |
| BstX2I | RGATCY | 1 cut(s) | 994 |
| BstYI | RGATCY | 1 cut(s) | 994 |
| BsuRI | GGCC | 2 cut(s) | 159, 1052 |
| BtgI | CCRYGG | 1 cut(s) | 408 |
| BtsCI | GGATG | 3 cut(s) | 367, 424, 510 |
| BtsI | GCAGTG | 1 cut(s) | 1038 |
| BtsIMutI | CAGTG | 1 cut(s) | 1038 |
| Cac8I | GCNNGC | 3 cut(s) | 683, 977, 1197 |
| CaiI | CAGNNNCTG | 2 cut(s) | 23, 817 |
| CfoI | GCGC | 2 cut(s) | 975, 1113 |
| CseI | GACGC | 1 cut(s) | 344 |
| Csp6I | GTAC | 3 cut(s) | 15, 452, 866 |
| CviAII | CATG | 4 cut(s) | 220, 566, 976, 1196 |
| CviQI | GTAC | 3 cut(s) | 15, 452, 866 |
| DdeI | CTNAG | 4 cut(s) | 456, 726, 1031, 1191 |
| DinI | GGCGCC | 1 cut(s) | 1112 |
| DpnI | GATC | 6 cut(s) | 101, 179, 843, 996, 1074, 1086 |
| DpnII | GATC | 6 cut(s) | 99, 177, 841, 994, 1072, 1084 |
| DriI | GACNNNNNGTC | 1 cut(s) | 772 |
| EaeI | YGGCCR | 1 cut(s) | 157 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 772 |
| Ecl136II | GAGCTC | 2 cut(s) | 424, 551 |
| Eco130I | CCWWGG | 1 cut(s) | 950 |
| Eco147I | AGGCCT | 1 cut(s) | 1052 |
| Eco24I | GRGCYC | 2 cut(s) | 426, 553 |
| Eco53kI | GAGCTC | 2 cut(s) | 424, 551 |
| Eco57I | CTGAAG | 2 cut(s) | 998, 1172 |
| Eco88I | CYCGRG | 1 cut(s) | 1046 |
| EcoICRI | GAGCTC | 2 cut(s) | 424, 551 |
| EcoRI | GAATTC | 1 cut(s) | 920 |
| EcoRII | CCWGG | 2 cut(s) | 669, 823 |
| EcoT14I | CCWWGG | 1 cut(s) | 950 |
| EcoT38I | GRGCYC | 2 cut(s) | 426, 553 |
| EgeI | GGCGCC | 1 cut(s) | 1112 |
| EheI | GGCGCC | 1 cut(s) | 1112 |
| ErhI | CCWWGG | 1 cut(s) | 950 |
| Esp3I | CGTCTC | 1 cut(s) | 1103 |
| FaeI | CATG | 4 cut(s) | 223, 569, 979, 1199 |
| FatI | CATG | 4 cut(s) | 219, 565, 975, 1195 |
| FauNDI | CATATG | 1 cut(s) | 770 |
| FbaI | TGATCA | 2 cut(s) | 841, 1072 |
| Fnu4HI | GCNGC | 4 cut(s) | 21, 24, 33, 602 |
| FokI | GGATG | 3 cut(s) | 354, 431, 517 |
| FriOI | GRGCYC | 2 cut(s) | 426, 553 |
| Fsp4HI | GCNGC | 4 cut(s) | 21, 24, 33, 602 |
| FspBI | CTAG | 4 cut(s) | 45, 278, 1220, 1228 |
| GlaI | GCGC | 2 cut(s) | 974, 1112 |
| GluI | GCNGC | 4 cut(s) | 21, 24, 33, 602 |
| GsuI | CTGGAG | 1 cut(s) | 306 |
| HaeII | RGCGCY | 1 cut(s) | 1114 |
| HaeIII | GGCC | 2 cut(s) | 159, 1052 |
| HapII | CCGG | 1 cut(s) | 29 |
| HgaI | GACGC | 1 cut(s) | 344 |
| HhaI | GCGC | 2 cut(s) | 975, 1113 |
| Hin1I | GRCGYC | 1 cut(s) | 1111 |
| Hin1II | CATG | 4 cut(s) | 223, 569, 979, 1199 |
| Hin6I | GCGC | 2 cut(s) | 973, 1111 |
| HinP1I | GCGC | 2 cut(s) | 973, 1111 |
| HinfI | GANTC | 2 cut(s) | 433, 607 |
| HpaII | CCGG | 1 cut(s) | 29 |
| HphI | GGTGA | 3 cut(s) | 145, 839, 938 |
| Hpy166II | GTNNAC | 1 cut(s) | 1060 |
| Hpy188I | TCNGA | 3 cut(s) | 432, 513, 540 |
| Hpy188III | TCNNGA | 6 cut(s) | 304, 884, 1005, 1046, 1145, 1179 |
| Hpy8I | GTNNAC | 1 cut(s) | 1060 |
| HpyAV | CCTTC | 3 cut(s) | 106, 301, 1147 |
| HpyCH4III | ACNGT | 2 cut(s) | 295, 463 |
| HpyCH4V | TGCA | 5 cut(s) | 299, 316, 346, 662, 1038 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 17, 29, 32, 352, 1049, 1117, 1147 |
| HpyF3I | CTNAG | 4 cut(s) | 456, 726, 1031, 1191 |
| Hsp92I | GRCGYC | 1 cut(s) | 1111 |
| Hsp92II | CATG | 4 cut(s) | 223, 569, 979, 1199 |
| HspAI | GCGC | 2 cut(s) | 973, 1111 |
| KasI | GGCGCC | 1 cut(s) | 1110 |
| Ksp22I | TGATCA | 2 cut(s) | 841, 1072 |
| Kzo9I | GATC | 6 cut(s) | 99, 177, 841, 994, 1072, 1084 |
| LmnI | GCTCC | 3 cut(s) | 31, 78, 1157 |
| Lsp1109I | GCAGC | 3 cut(s) | 10, 19, 32 |
| LweI | GCATC | 2 cut(s) | 495, 1025 |
| MaeI | CTAG | 4 cut(s) | 45, 278, 1220, 1228 |
| MaeIII | GTNAC | 3 cut(s) | 169, 215, 381 |
| MalI | GATC | 6 cut(s) | 101, 179, 843, 996, 1074, 1086 |
| MboI | GATC | 6 cut(s) | 99, 177, 841, 994, 1072, 1084 |
| MboII | GAAGA | 1 cut(s) | 109 |
| MflI | RGATCY | 1 cut(s) | 994 |
| MhlI | GDGCHC | 3 cut(s) | 426, 553, 724 |
| MlsI | TGGCCA | 1 cut(s) | 159 |
| MluCI | AATT | 4 cut(s) | 84, 910, 920, 926 |
| MluNI | TGGCCA | 1 cut(s) | 159 |
| Mly113I | GGCGCC | 1 cut(s) | 1111 |
| MnlI | CCTC | 8 cut(s) | 73, 519, 563, 880, 1042, 1131, 1134, 1152 |
| Mox20I | TGGCCA | 1 cut(s) | 159 |
| MroXI | GAANNNNTTC | 1 cut(s) | 801 |
| MscI | TGGCCA | 1 cut(s) | 159 |
| MseI | TTAA | 5 cut(s) | 87, 597, 618, 639, 861 |
| MslI | CAYNNNNRTG | 1 cut(s) | 372 |
| Msp20I | TGGCCA | 1 cut(s) | 159 |
| MspA1I | CMGCKG | 4 cut(s) | 11, 23, 128, 502 |
| MspI | CCGG | 1 cut(s) | 29 |
| MspR9I | CCNGG | 2 cut(s) | 671, 825 |
| MvaI | CCWGG | 2 cut(s) | 671, 825 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 17, 29, 32, 352, 1049, 1117, 1147 |
| NarI | GGCGCC | 1 cut(s) | 1111 |
| NdeI | CATATG | 1 cut(s) | 770 |
| NdeII | GATC | 6 cut(s) | 99, 177, 841, 994, 1072, 1084 |
| NlaIII | CATG | 4 cut(s) | 223, 569, 979, 1199 |
| NlaIV | GGNNCC | 1 cut(s) | 1112 |
| NmuCI | GTSAC | 1 cut(s) | 381 |
| NspI | RCATGY | 2 cut(s) | 979, 1199 |
| PaeI | GCATGC | 2 cut(s) | 979, 1199 |
| PaeR7I | CTCGAG | 1 cut(s) | 1046 |
| PceI | AGGCCT | 1 cut(s) | 1052 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 715 |
| PdmI | GAANNNNTTC | 1 cut(s) | 801 |
| PfeI | GAWTC | 2 cut(s) | 433, 607 |
| PkrI | GCNGC | 4 cut(s) | 22, 25, 34, 603 |
| Ple19I | CGATCG | 1 cut(s) | 180 |
| PluTI | GGCGCC | 1 cut(s) | 1114 |
| PshBI | ATTAAT | 1 cut(s) | 87 |
| Psp124BI | GAGCTC | 2 cut(s) | 426, 553 |
| Psp6I | CCWGG | 2 cut(s) | 669, 823 |
| PspGI | CCWGG | 2 cut(s) | 669, 823 |
| PspN4I | GGNNCC | 1 cut(s) | 1112 |
| PstNI | CAGNNNCTG | 2 cut(s) | 23, 817 |
| PsuI | RGATCY | 1 cut(s) | 994 |
| PvuI | CGATCG | 1 cut(s) | 180 |
| PvuII | CAGCTG | 3 cut(s) | 11, 23, 128 |
| RsaI | GTAC | 3 cut(s) | 16, 453, 867 |
| RsaNI | GTAC | 3 cut(s) | 15, 452, 866 |
| RseI | CAYNNNNRTG | 1 cut(s) | 372 |
| SacI | GAGCTC | 2 cut(s) | 426, 553 |
| SaqAI | TTAA | 5 cut(s) | 87, 597, 618, 639, 861 |
| SatI | GCNGC | 4 cut(s) | 21, 24, 33, 602 |
| Sau3AI | GATC | 6 cut(s) | 99, 177, 841, 994, 1072, 1084 |
| ScrFI | CCNGG | 2 cut(s) | 671, 825 |
| SduI | GDGCHC | 3 cut(s) | 426, 553, 724 |
| SfaNI | GCATC | 2 cut(s) | 495, 1025 |
| SfcI | CTRYAG | 1 cut(s) | 484 |
| SfoI | GGCGCC | 1 cut(s) | 1112 |
| Sfr274I | CTCGAG | 1 cut(s) | 1046 |
| SlaI | CTCGAG | 1 cut(s) | 1046 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 372 |
| SmlI | CTYRAG | 2 cut(s) | 1046, 1143 |
| SmoI | CTYRAG | 2 cut(s) | 1046, 1143 |
| SphI | GCATGC | 2 cut(s) | 979, 1199 |
| Sse9I | AATT | 4 cut(s) | 84, 910, 920, 926 |
| SseBI | AGGCCT | 1 cut(s) | 1052 |
| SsiI | CCGC | 2 cut(s) | 502, 602 |
| SspDI | GGCGCC | 1 cut(s) | 1110 |
| SspI | AATATT | 1 cut(s) | 963 |
| SspMI | CTAG | 4 cut(s) | 45, 278, 1220, 1228 |
| SstI | GAGCTC | 2 cut(s) | 426, 553 |
| StuI | AGGCCT | 1 cut(s) | 1052 |
| StyD4I | CCNGG | 2 cut(s) | 669, 823 |
| StyI | CCWWGG | 1 cut(s) | 950 |
| TaaI | ACNGT | 2 cut(s) | 295, 463 |
| TaqI | TCGA | 3 cut(s) | 187, 718, 1047 |
| TasI | AATT | 4 cut(s) | 84, 910, 920, 926 |
| TauI | GCSGC | 1 cut(s) | 604 |
| TfiI | GAWTC | 2 cut(s) | 433, 607 |
| Tru1I | TTAA | 5 cut(s) | 87, 597, 618, 639, 861 |
| Tru9I | TTAA | 5 cut(s) | 87, 597, 618, 639, 861 |
| TscAI | CASTG | 1 cut(s) | 1045 |
| TseFI | GTSAC | 1 cut(s) | 381 |
| TseI | GCWGC | 3 cut(s) | 20, 23, 32 |
| Tsp45I | GTSAC | 1 cut(s) | 381 |
| TspDTI | ATGAA | 4 cut(s) | 105, 110, 554, 917 |
| TspGWI | ACGGA | 2 cut(s) | 425, 1070 |
| TspRI | CASTG | 1 cut(s) | 1045 |
| VspI | ATTAAT | 1 cut(s) | 87 |
| XapI | RAATTY | 2 cut(s) | 920, 926 |
| XceI | RCATGY | 2 cut(s) | 979, 1199 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 217 |
| XhoI | CTCGAG | 1 cut(s) | 1046 |
| XmnI | GAANNNNTTC | 1 cut(s) | 801 |
| XspI | CTAG | 4 cut(s) | 45, 278, 1220, 1228 |