Belongs to the DEAD box helicase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G14640 AT5G14640 |
| fragaria_vesca | FvH4_6g50970 FvH4_6g50970 |
| malus_domestica | MD09G1030000.v1.1 |
| prunus_persica | Prupe.3G287300_v2.0.a1 Prupe.3G287300_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0172371 |
| rosa_laevigata | RLG00000022108 |
| rosa_multiflora | Rmu_sc0000467.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00079940 |
| rosa_rugosa | Rorug02G0558800 Rorug02G0558800 |
| rosa_samantha | Rh2AG634000 Rh2BG647700 Rh2CG614700 Rh2DG662500 |
| rosa_wichuraiana | Rw2G052510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 890 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2078 |
| AccIII | TCCGGA | 1 cut(s) | 1484 |
| AciI | CCGC | 4 cut(s) | 520, 2258, 2330, 2524 |
| AclWI | GGATC | 4 cut(s) | 1097, 1670, 2039, 2453 |
| AcoI | YGGCCR | 1 cut(s) | 175 |
| AcsI | RAATTY | 6 cut(s) | 938, 944, 1588, 2231, 2659, 2787 |
| AcuI | CTGAAG | 2 cut(s) | 1190, 1671 |
| AfaI | GTAC | 7 cut(s) | 471, 885, 1057, 1426, 1441, 1808, 2249 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 969, 1050, 2078, 2361, 2620, 2778, 2949 |
| AflII | CTTAAG | 1 cut(s) | 2459 |
| AgeI | ACCGGT | 1 cut(s) | 2919 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 790 |
| AjiI | CACGTC | 1 cut(s) | 1452 |
| AjnI | CCWGG | 2 cut(s) | 687, 841 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 738, 770, 807, 839 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2186, 2218 |
| Alw21I | GWGCWC | 4 cut(s) | 444, 571, 742, 1215 |
| Alw26I | GTCTC | 3 cut(s) | 470, 1121, 1489 |
| AlwI | GGATC | 4 cut(s) | 1097, 1670, 2039, 2453 |
| Ama87I | CYCGRG | 1 cut(s) | 2654 |
| Aor13HI | TCCGGA | 1 cut(s) | 1484 |
| AoxI | GGCC | 4 cut(s) | 175, 960, 1788, 2372 |
| ApeKI | GCWGC | 4 cut(s) | 143, 1889, 2132, 2261 |
| ApoI | RAATTY | 6 cut(s) | 938, 944, 1588, 2231, 2659, 2787 |
| AseI | ATTAAT | 1 cut(s) | 105 |
| AsiGI | ACCGGT | 1 cut(s) | 2919 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 819, 2663 |
| AspLEI | GCGC | 4 cut(s) | 37, 375, 993, 2391 |
| AspS9I | GGNCC | 4 cut(s) | 14, 961, 2141, 2634 |
| AsuHPI | GGTGA | 3 cut(s) | 703, 857, 2879 |
| AsuII | TTCGAA | 1 cut(s) | 2791 |
| AvaI | CYCGRG | 1 cut(s) | 2654 |
| AvaII | GGWCC | 3 cut(s) | 14, 2141, 2634 |
| AxyI | CCTNAGG | 1 cut(s) | 1049 |
| BanI | GGYRCC | 1 cut(s) | 890 |
| BanII | GRGCYC | 4 cut(s) | 266, 444, 571, 2978 |
| BauI | CACGAG | 2 cut(s) | 900, 2960 |
| BbsI | GAAGAC | 1 cut(s) | 1524 |
| Bbv12I | GWGCWC | 4 cut(s) | 444, 571, 742, 1215 |
| BbvI | GCAGC | 4 cut(s) | 155, 1876, 2144, 2248 |
| BccI | CCATC | 6 cut(s) | 149, 788, 1706, 2361, 2784, 3011 |
| BceAI | ACGGC | 3 cut(s) | 1319, 1416, 1482 |
| BciT130I | CCWGG | 2 cut(s) | 689, 843 |
| BclI | TGATCA | 2 cut(s) | 382, 859 |
| BcoDI | GTCTC | 3 cut(s) | 470, 1121, 1489 |
| BfaI | CTAG | 7 cut(s) | 1218, 1238, 1499, 1941, 2265, 2376, 2424 |
| BfmI | CTRYAG | 3 cut(s) | 502, 1342, 2408 |
| BfoI | RGCGCY | 1 cut(s) | 38 |
| BfrI | CTTAAG | 1 cut(s) | 2459 |
| BglII | AGATCT | 2 cut(s) | 1012, 1723 |
| BisI | GCNGC | 6 cut(s) | 144, 1890, 2133, 2259, 2262, 2524 |
| BlsI | GCNGC | 6 cut(s) | 145, 1891, 2134, 2260, 2263, 2525 |
| BmcAI | AGTACT | 1 cut(s) | 2249 |
| Bme1390I | CCNGG | 2 cut(s) | 689, 843 |
| Bme18I | GGWCC | 3 cut(s) | 14, 2141, 2634 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 790 |
| BmeT110I | CYCGRG | 1 cut(s) | 2654 |
| BmgBI | CACGTC | 1 cut(s) | 1452 |
| BmgT120I | GGNCC | 4 cut(s) | 14, 961, 2141, 2634 |
| BmiI | GGNNCC | 6 cut(s) | 24, 892, 2574, 2612, 2714, 2975 |
| BmrFI | CCNGG | 2 cut(s) | 689, 843 |
| BmsI | GCATC | 5 cut(s) | 513, 1567, 1903, 2335, 2733 |
| BpiI | GAAGAC | 1 cut(s) | 1524 |
| BpmI | CTGGAG | 3 cut(s) | 324, 1334, 1581 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1209 |
| Bpu14I | TTCGAA | 1 cut(s) | 2791 |
| BpuEI | CTTGAG | 3 cut(s) | 1085, 1146, 3044 |
| Bsa29I | ATCGAT | 1 cut(s) | 1668 |
| BsaAI | YACGTR | 1 cut(s) | 552 |
| BsaBI | GATNNNNATC | 2 cut(s) | 116, 1674 |
| BsaJI | CCNNGG | 5 cut(s) | 426, 841, 968, 1791, 2606 |
| BsaWI | WCCGGW | 5 cut(s) | 16, 94, 1382, 1484, 2919 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 297, 327, 1436, 1466, 2046, 2076, 2128, 2158 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 969, 1050, 2078, 2361, 2620, 2778, 2949 |
| Bse118I | RCCGGY | 4 cut(s) | 37, 173, 2919, 2993 |
| Bse1I | ACTGG | 1 cut(s) | 307 |
| Bse21I | CCTNAGG | 1 cut(s) | 1049 |
| Bse3DI | GCAATG | 2 cut(s) | 1232, 2418 |
| Bse8I | GATNNNNATC | 2 cut(s) | 116, 1674 |
| BseAI | TCCGGA | 1 cut(s) | 1484 |
| BseBI | CCWGG | 2 cut(s) | 689, 843 |
| BseCI | ATCGAT | 1 cut(s) | 1668 |
| BseDI | CCNNGG | 5 cut(s) | 426, 841, 968, 1791, 2606 |
| BseGI | GGATG | 7 cut(s) | 160, 385, 442, 528, 1717, 1856, 3022 |
| BseJI | GATNNNNATC | 2 cut(s) | 116, 1674 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 969, 1050, 2078, 2361, 2620, 2778, 2949 |
| BseMI | GCAATG | 2 cut(s) | 1232, 2418 |
| BseMII | CTCAG | 5 cut(s) | 465, 1200, 1758, 1907, 2430 |
| BseNI | ACTGG | 1 cut(s) | 307 |
| BseRI | GAGGAG | 6 cut(s) | 1131, 1247, 1252, 1784, 1787, 2723 |
| BseXI | GCAGC | 4 cut(s) | 155, 1876, 2144, 2248 |
| BseYI | CCCAGC | 1 cut(s) | 1043 |
| BsgI | GTGCAG | 2 cut(s) | 2781, 2921 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2920 |
| BshFI | GGCC | 4 cut(s) | 177, 962, 1790, 2374 |
| BshNI | GGYRCC | 1 cut(s) | 890 |
| BshTI | ACCGGT | 1 cut(s) | 2919 |
| BshVI | ATCGAT | 1 cut(s) | 1668 |
| BsiEI | CGRYCG | 1 cut(s) | 2920 |
| BsiHKAI | GWGCWC | 4 cut(s) | 444, 571, 742, 1215 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2654 |
| BslFI | GGGAC | 3 cut(s) | 178, 623, 2396 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 969, 1050, 2078, 2361, 2620, 2778, 2949 |
| BsmAI | GTCTC | 3 cut(s) | 470, 1121, 1489 |
| BsmBI | CGTCTC | 1 cut(s) | 1121 |
| BsmFI | GGGAC | 3 cut(s) | 178, 623, 2396 |
| BsmI | GAATGC | 3 cut(s) | 1755, 2525, 2917 |
| BsnI | GGCC | 4 cut(s) | 177, 962, 1790, 2374 |
| BsoBI | CYCGRG | 1 cut(s) | 2654 |
| Bsp119I | TTCGAA | 1 cut(s) | 2791 |
| Bsp1286I | GDGCHC | 6 cut(s) | 266, 444, 571, 742, 1215, 2978 |
| Bsp13I | TCCGGA | 1 cut(s) | 1484 |
| BspACI | CCGC | 4 cut(s) | 520, 2258, 2330, 2524 |
| BspANI | GGCC | 4 cut(s) | 177, 962, 1790, 2374 |
| BspCNI | CTCAG | 5 cut(s) | 466, 1201, 1759, 1906, 2431 |
| BspDI | ATCGAT | 1 cut(s) | 1668 |
| BspEI | TCCGGA | 1 cut(s) | 1484 |
| BspLI | GGNNCC | 6 cut(s) | 24, 892, 2574, 2612, 2714, 2975 |
| BspPI | GGATC | 4 cut(s) | 1097, 1670, 2039, 2453 |
| BspT104I | TTCGAA | 1 cut(s) | 2791 |
| BspT107I | GGYRCC | 1 cut(s) | 890 |
| BspTI | CTTAAG | 1 cut(s) | 2459 |
| BsrDI | GCAATG | 2 cut(s) | 1232, 2418 |
| BsrFI | RCCGGY | 4 cut(s) | 37, 173, 2919, 2993 |
| BsrI | ACTGG | 1 cut(s) | 307 |
| BssAI | RCCGGY | 4 cut(s) | 37, 173, 2919, 2993 |
| BssECI | CCNNGG | 5 cut(s) | 426, 841, 968, 1791, 2606 |
| BssSI | CACGAG | 2 cut(s) | 900, 2960 |
| BssT1I | CCWWGG | 2 cut(s) | 968, 1791 |
| Bst2BI | CACGAG | 2 cut(s) | 900, 2960 |
| Bst2UI | CCWGG | 2 cut(s) | 689, 843 |
| Bst4CI | ACNGT | 8 cut(s) | 229, 313, 481, 1183, 1641, 2505, 2680, 2839 |
| Bst6I | CTCTTC | 3 cut(s) | 842, 1151, 1926 |
| BstAFI | CTTAAG | 1 cut(s) | 2459 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 80, 370, 1913 |
| BstBAI | YACGTR | 1 cut(s) | 552 |
| BstBI | TTCGAA | 1 cut(s) | 2791 |
| BstC8I | GCNNGC | 6 cut(s) | 39, 806, 810, 995, 1215, 2454 |
| BstDEI | CTNAG | 7 cut(s) | 474, 1049, 1209, 1767, 1893, 2439, 3073 |
| BstDSI | CCRYGG | 1 cut(s) | 426 |
| BstF5I | GGATG | 7 cut(s) | 160, 385, 442, 528, 1717, 1856, 3022 |
| BstH2I | RGCGCY | 1 cut(s) | 38 |
| BstHHI | GCGC | 4 cut(s) | 37, 375, 993, 2391 |
| BstMAI | GTCTC | 3 cut(s) | 470, 1121, 1489 |
| BstMCI | CGRYCG | 1 cut(s) | 2920 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 80, 370, 1067, 1165, 1363, 1829, 1913, 2395, 2768 |
| BstNI | CCWGG | 2 cut(s) | 689, 843 |
| BstNSI | RCATGY | 1 cut(s) | 997 |
| BstSCI | CCNGG | 2 cut(s) | 687, 841 |
| BstSFI | CTRYAG | 3 cut(s) | 502, 1342, 2408 |
| BstSNI | TACGTA | 1 cut(s) | 552 |
| BstV1I | GCAGC | 4 cut(s) | 155, 1876, 2144, 2248 |
| BstV2I | GAAGAC | 1 cut(s) | 1524 |
| BstX2I | RGATCY | 2 cut(s) | 1012, 1723 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2783 |
| BstYI | RGATCY | 2 cut(s) | 1012, 1723 |
| Bsu15I | ATCGAT | 1 cut(s) | 1668 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1049 |
| BsuRI | GGCC | 4 cut(s) | 177, 962, 1790, 2374 |
| BsuTUI | ATCGAT | 1 cut(s) | 1668 |
| BtgI | CCRYGG | 1 cut(s) | 426 |
| BtrI | CACGTC | 1 cut(s) | 1452 |
| BtsCI | GGATG | 7 cut(s) | 160, 385, 442, 528, 1717, 1856, 3022 |
| BtsI | GCAGTG | 2 cut(s) | 409, 1374 |
| BtsIMutI | CAGTG | 3 cut(s) | 409, 1374, 1646 |
| Cac8I | GCNNGC | 6 cut(s) | 39, 806, 810, 995, 1215, 2454 |
| CfoI | GCGC | 4 cut(s) | 37, 375, 993, 2391 |
| Cfr10I | RCCGGY | 4 cut(s) | 37, 173, 2919, 2993 |
| Cfr13I | GGNCC | 4 cut(s) | 14, 961, 2141, 2634 |
| ClaI | ATCGAT | 1 cut(s) | 1668 |
| Csp6I | GTAC | 7 cut(s) | 470, 884, 1056, 1425, 1440, 1807, 2248 |
| CspAI | ACCGGT | 1 cut(s) | 2919 |
| CviAII | CATG | 5 cut(s) | 238, 919, 994, 1993, 2356 |
| CviQI | GTAC | 7 cut(s) | 470, 884, 1056, 1425, 1440, 1807, 2248 |
| DdeI | CTNAG | 7 cut(s) | 474, 1049, 1209, 1767, 1893, 2439, 3073 |
| DriI | GACNNNNNGTC | 1 cut(s) | 790 |
| EaeI | YGGCCR | 1 cut(s) | 175 |
| Eam1104I | CTCTTC | 3 cut(s) | 842, 1151, 1926 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 790 |
| EarI | CTCTTC | 3 cut(s) | 842, 1151, 1926 |
| Ecl136II | GAGCTC | 2 cut(s) | 442, 569 |
| Eco105I | TACGTA | 1 cut(s) | 552 |
| Eco130I | CCWWGG | 2 cut(s) | 968, 1791 |
| Eco24I | GRGCYC | 4 cut(s) | 266, 444, 571, 2978 |
| Eco32I | GATATC | 2 cut(s) | 2202, 2221 |
| Eco47I | GGWCC | 3 cut(s) | 14, 2141, 2634 |
| Eco53kI | GAGCTC | 2 cut(s) | 442, 569 |
| Eco57I | CTGAAG | 2 cut(s) | 1190, 1671 |
| Eco81I | CCTNAGG | 1 cut(s) | 1049 |
| Eco88I | CYCGRG | 1 cut(s) | 2654 |
| EcoICRI | GAGCTC | 2 cut(s) | 442, 569 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2141 |
| EcoRI | GAATTC | 3 cut(s) | 938, 2659, 2787 |
| EcoRII | CCWGG | 2 cut(s) | 687, 841 |
| EcoRV | GATATC | 2 cut(s) | 2202, 2221 |
| EcoT14I | CCWWGG | 2 cut(s) | 968, 1791 |
| EcoT22I | ATGCAT | 2 cut(s) | 920, 2350 |
| EcoT38I | GRGCYC | 4 cut(s) | 266, 444, 571, 2978 |
| ErhI | CCWWGG | 2 cut(s) | 968, 1791 |
| Esp3I | CGTCTC | 1 cut(s) | 1121 |
| FaeI | CATG | 5 cut(s) | 241, 922, 997, 1996, 2359 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1420, 1452, 2864, 2896 |
| FaqI | GGGAC | 3 cut(s) | 178, 623, 2396 |
| FatI | CATG | 5 cut(s) | 237, 918, 993, 1992, 2355 |
| FbaI | TGATCA | 2 cut(s) | 382, 859 |
| Fnu4HI | GCNGC | 6 cut(s) | 144, 1890, 2133, 2259, 2262, 2524 |
| FokI | GGATG | 7 cut(s) | 167, 372, 449, 535, 1724, 1843, 3029 |
| FriOI | GRGCYC | 4 cut(s) | 266, 444, 571, 2978 |
| Fsp4HI | GCNGC | 6 cut(s) | 144, 1890, 2133, 2259, 2262, 2524 |
| FspBI | CTAG | 7 cut(s) | 1218, 1238, 1499, 1941, 2265, 2376, 2424 |
| GlaI | GCGC | 4 cut(s) | 36, 374, 992, 2390 |
| GluI | GCNGC | 6 cut(s) | 144, 1890, 2133, 2259, 2262, 2524 |
| GsaI | CCCAGC | 1 cut(s) | 1047 |
| GsuI | CTGGAG | 3 cut(s) | 324, 1334, 1581 |
| HaeII | RGCGCY | 1 cut(s) | 38 |
| HaeIII | GGCC | 4 cut(s) | 177, 962, 1790, 2374 |
| HhaI | GCGC | 4 cut(s) | 37, 375, 993, 2391 |
| Hin1II | CATG | 5 cut(s) | 241, 922, 997, 1996, 2359 |
| Hin6I | GCGC | 4 cut(s) | 35, 373, 991, 2389 |
| HinP1I | GCGC | 4 cut(s) | 35, 373, 991, 2389 |
| HincII | GTYRAC | 2 cut(s) | 1852, 2436 |
| HindII | GTYRAC | 2 cut(s) | 1852, 2436 |
| HphI | GGTGA | 3 cut(s) | 703, 857, 2879 |
| Hpy166II | GTNNAC | 6 cut(s) | 725, 1056, 1078, 1809, 1852, 2436 |
| Hpy8I | GTNNAC | 6 cut(s) | 725, 1056, 1078, 1809, 1852, 2436 |
| Hpy99I | CGWCG | 5 cut(s) | 1453, 1465, 1468, 1474, 2505 |
| HpyAV | CCTTC | 7 cut(s) | 124, 319, 386, 1165, 2005, 2333, 3073 |
| HpyCH4III | ACNGT | 8 cut(s) | 229, 313, 481, 1183, 1641, 2505, 2680, 2839 |
| HpyCH4IV | ACGT | 4 cut(s) | 551, 727, 1451, 1504 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 80, 370, 1067, 1165, 1363, 1829, 1913, 2395, 2768 |
| HpyF3I | CTNAG | 7 cut(s) | 474, 1049, 1209, 1767, 1893, 2439, 3073 |
| HpySE526I | ACGT | 4 cut(s) | 551, 727, 1451, 1504 |
| Hsp92II | CATG | 5 cut(s) | 241, 922, 997, 1996, 2359 |
| HspAI | GCGC | 4 cut(s) | 35, 373, 991, 2389 |
| Kpn2I | TCCGGA | 1 cut(s) | 1484 |
| KroI | GCCGGC | 1 cut(s) | 37 |
| KroNI | GCCGGC | 1 cut(s) | 39 |
| Ksp22I | TGATCA | 2 cut(s) | 382, 859 |
| LmnI | GCTCC | 6 cut(s) | 28, 1701, 2572, 2857, 2926, 2973 |
| Lsp1109I | GCAGC | 4 cut(s) | 155, 1876, 2144, 2248 |
| LweI | GCATC | 5 cut(s) | 513, 1567, 1903, 2335, 2733 |
| MaeI | CTAG | 7 cut(s) | 1218, 1238, 1499, 1941, 2265, 2376, 2424 |
| MaeII | ACGT | 4 cut(s) | 551, 727, 1451, 1504 |
| MaeIII | GTNAC | 4 cut(s) | 65, 187, 233, 2649 |
| MflI | RGATCY | 2 cut(s) | 1012, 1723 |
| MhlI | GDGCHC | 6 cut(s) | 266, 444, 571, 742, 1215, 2978 |
| MlyI | GAGTC | 4 cut(s) | 1475, 1847, 2170, 2505 |
| MmeI | TCCRAC | 3 cut(s) | 2117, 2524, 2904 |
| Mph1103I | ATGCAT | 2 cut(s) | 920, 2350 |
| MroI | TCCGGA | 1 cut(s) | 1484 |
| MroNI | GCCGGC | 1 cut(s) | 37 |
| MroXI | GAANNNNTTC | 2 cut(s) | 819, 2663 |
| MseI | TTAA | 5 cut(s) | 105, 615, 636, 879, 2460 |
| MslI | CAYNNNNRTG | 4 cut(s) | 185, 390, 1956, 3015 |
| MspA1I | CMGCKG | 5 cut(s) | 11, 146, 520, 1889, 2825 |
| MspCI | CTTAAG | 1 cut(s) | 2459 |
| MspR9I | CCNGG | 2 cut(s) | 689, 843 |
| Mva1269I | GAATGC | 3 cut(s) | 1755, 2525, 2917 |
| MvaI | CCWGG | 2 cut(s) | 689, 843 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 80, 370, 1067, 1165, 1363, 1829, 1913, 2395, 2768 |
| NaeI | GCCGGC | 1 cut(s) | 39 |
| NgoMIV | GCCGGC | 1 cut(s) | 37 |
| NlaIII | CATG | 5 cut(s) | 241, 922, 997, 1996, 2359 |
| NlaIV | GGNNCC | 6 cut(s) | 24, 892, 2574, 2612, 2714, 2975 |
| NmuCI | GTSAC | 2 cut(s) | 187, 2649 |
| NsiI | ATGCAT | 2 cut(s) | 920, 2350 |
| NspI | RCATGY | 1 cut(s) | 997 |
| NspV | TTCGAA | 1 cut(s) | 2791 |
| PaeI | GCATGC | 1 cut(s) | 997 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 733, 1448, 1457, 1466 |
| PctI | GAATGC | 3 cut(s) | 1755, 2525, 2917 |
| PdiI | GCCGGC | 1 cut(s) | 39 |
| PdmI | GAANNNNTTC | 2 cut(s) | 819, 2663 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2078 |
| PinAI | ACCGGT | 1 cut(s) | 2919 |
| PkrI | GCNGC | 6 cut(s) | 145, 1891, 2134, 2260, 2263, 2525 |
| PleI | GAGTC | 4 cut(s) | 1475, 1847, 2170, 2504 |
| PpsI | GAGTC | 4 cut(s) | 1475, 1847, 2170, 2504 |
| Ppu21I | YACGTR | 1 cut(s) | 552 |
| PpuMI | RGGWCCY | 1 cut(s) | 2141 |
| PshBI | ATTAAT | 1 cut(s) | 105 |
| Psp124BI | GAGCTC | 2 cut(s) | 444, 571 |
| Psp5II | RGGWCCY | 1 cut(s) | 2141 |
| Psp6I | CCWGG | 2 cut(s) | 687, 841 |
| PspFI | CCCAGC | 1 cut(s) | 1043 |
| PspGI | CCWGG | 2 cut(s) | 687, 841 |
| PspN4I | GGNNCC | 6 cut(s) | 24, 892, 2574, 2612, 2714, 2975 |
| PspPI | GGNCC | 4 cut(s) | 14, 961, 2141, 2634 |
| PspPPI | RGGWCCY | 1 cut(s) | 2141 |
| PsuI | RGATCY | 2 cut(s) | 1012, 1723 |
| PvuII | CAGCTG | 4 cut(s) | 11, 146, 1889, 2825 |
| RsaI | GTAC | 7 cut(s) | 471, 885, 1057, 1426, 1441, 1808, 2249 |
| RsaNI | GTAC | 7 cut(s) | 470, 884, 1056, 1425, 1440, 1807, 2248 |
| RseI | CAYNNNNRTG | 4 cut(s) | 185, 390, 1956, 3015 |
| SacI | GAGCTC | 2 cut(s) | 444, 571 |
| SaqAI | TTAA | 5 cut(s) | 105, 615, 636, 879, 2460 |
| SatI | GCNGC | 6 cut(s) | 144, 1890, 2133, 2259, 2262, 2524 |
| Sau96I | GGNCC | 4 cut(s) | 14, 961, 2141, 2634 |
| ScaI | AGTACT | 1 cut(s) | 2249 |
| SchI | GAGTC | 4 cut(s) | 1475, 1847, 2170, 2505 |
| ScrFI | CCNGG | 2 cut(s) | 689, 843 |
| SduI | GDGCHC | 6 cut(s) | 266, 444, 571, 742, 1215, 2978 |
| SfaNI | GCATC | 5 cut(s) | 513, 1567, 1903, 2335, 2733 |
| SfcI | CTRYAG | 3 cut(s) | 502, 1342, 2408 |
| SfuI | TTCGAA | 1 cut(s) | 2791 |
| SinI | GGWCC | 3 cut(s) | 14, 2141, 2634 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 185, 390, 1956, 3015 |
| SmlI | CTYRAG | 4 cut(s) | 1064, 1161, 2459, 3023 |
| SmoI | CTYRAG | 4 cut(s) | 1064, 1161, 2459, 3023 |
| SnaBI | TACGTA | 1 cut(s) | 552 |
| SphI | GCATGC | 1 cut(s) | 997 |
| SsiI | CCGC | 4 cut(s) | 520, 2258, 2330, 2524 |
| SspI | AATATT | 2 cut(s) | 981, 1037 |
| SspMI | CTAG | 7 cut(s) | 1218, 1238, 1499, 1941, 2265, 2376, 2424 |
| SstI | GAGCTC | 2 cut(s) | 444, 571 |
| StyD4I | CCNGG | 2 cut(s) | 687, 841 |
| StyI | CCWWGG | 2 cut(s) | 968, 1791 |
| TaaI | ACNGT | 8 cut(s) | 229, 313, 481, 1183, 1641, 2505, 2680, 2839 |
| TaiI | ACGT | 4 cut(s) | 554, 730, 1454, 1507 |
| TaqII | GACCGA | 1 cut(s) | 2651 |
| TatI | WGTACW | 2 cut(s) | 1055, 2247 |
| TauI | GCSGC | 2 cut(s) | 2261, 2526 |
| Tru1I | TTAA | 5 cut(s) | 105, 615, 636, 879, 2460 |
| Tru9I | TTAA | 5 cut(s) | 105, 615, 636, 879, 2460 |
| TscAI | CASTG | 3 cut(s) | 416, 1381, 1646 |
| TseFI | GTSAC | 2 cut(s) | 187, 2649 |
| TseI | GCWGC | 4 cut(s) | 143, 1889, 2132, 2261 |
| Tsp45I | GTSAC | 2 cut(s) | 187, 2649 |
| TspGWI | ACGGA | 8 cut(s) | 443, 600, 1088, 1140, 1412, 1457, 1487, 3050 |
| TspRI | CASTG | 3 cut(s) | 416, 1381, 1646 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2078 |
| Vha464I | CTTAAG | 1 cut(s) | 2459 |
| VpaK11BI | GGWCC | 3 cut(s) | 14, 2141, 2634 |
| VspI | ATTAAT | 1 cut(s) | 105 |
| XapI | RAATTY | 6 cut(s) | 938, 944, 1588, 2231, 2659, 2787 |
| XbaI | TCTAGA | 1 cut(s) | 1237 |
| XceI | RCATGY | 1 cut(s) | 997 |
| XmnI | GAANNNNTTC | 2 cut(s) | 819, 2663 |
| XspI | CTAG | 7 cut(s) | 1218, 1238, 1499, 1941, 2265, 2376, 2424 |
| ZrmI | AGTACT | 1 cut(s) | 2249 |
| Zsp2I | ATGCAT | 2 cut(s) | 920, 2350 |