Bacterial Ig-like domain 2
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G10590 AT5G40480 |
| fragaria_vesca | FvH4_6g51430 |
| malus_domestica | MD17G1026700.v1.1 |
| prunus_persica | Prupe.3G292000_v2.0.a1 Prupe.3G292000_v2.0.a1 |
| pyrus_communis | pycom17g02180 |
| rosa_chinensis | RchiOBHm_Chr2g0173101 |
| rosa_laevigata | RLG00000022158 |
| rosa_multiflora | Rmu_sc0011236.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00079240 |
| rosa_rugosa | Rorug02G0565200 |
| rosa_samantha | Rh2AG645300 Rh2BG656000 Rh2CG621100 Rh2DG669400 |
| rosa_wichuraiana | Rw2G053000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 5360 |
| AarI | CACCTGC | 1 cut(s) | 2048 |
| AatII | GACGTC | 1 cut(s) | 96 |
| Acc36I | ACCTGC | 1 cut(s) | 2048 |
| Acc65I | GGTACC | 2 cut(s) | 1104, 4426 |
| AccB1I | GGYRCC | 5 cut(s) | 1104, 1745, 4084, 4426, 4700 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 2329, 3530, 4835, 5531 |
| AccBSI | CCGCTC | 1 cut(s) | 5404 |
| AccI | GTMKAC | 3 cut(s) | 1028, 2848, 3120 |
| AccII | CGCG | 2 cut(s) | 244, 2358 |
| AccIII | TCCGGA | 1 cut(s) | 4555 |
| AciI | CCGC | 8 cut(s) | 244, 558, 2027, 2039, 2358, 2506, 5084, 5404 |
| AclWI | GGATC | 9 cut(s) | 186, 1034, 3279, 3377, 3896, 3909, 5124, 5269, 5456 |
| AcoI | YGGCCR | 5 cut(s) | 958, 2377, 3745, 4183, 4786 |
| AcuI | CTGAAG | 9 cut(s) | 128, 852, 1506, 3573, 3628, 3891, 4155, 4738, 4866 |
| AcyI | GRCGYC | 3 cut(s) | 59, 93, 3176 |
| AdeI | CACNNNGTG | 1 cut(s) | 4592 |
| AflII | CTTAAG | 1 cut(s) | 4613 |
| AflIII | ACRYGT | 1 cut(s) | 2461 |
| AgeI | ACCGGT | 1 cut(s) | 5126 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2000 |
| AhlI | ACTAGT | 1 cut(s) | 221 |
| AjiI | CACGTC | 1 cut(s) | 5459 |
| AjnI | CCWGG | 7 cut(s) | 1436, 1563, 1576, 2152, 3487, 3613, 5367 |
| Alw21I | GWGCWC | 5 cut(s) | 74, 1602, 2700, 3807, 4639 |
| AlwI | GGATC | 9 cut(s) | 186, 1034, 3279, 3377, 3896, 3909, 5124, 5269, 5456 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2111, 5264, 5585 |
| Ama87I | CYCGRG | 1 cut(s) | 2973 |
| Aor13HI | TCCGGA | 1 cut(s) | 4555 |
| AoxI | GGCC | 8 cut(s) | 958, 1440, 2377, 2737, 3520, 3745, 4183, 4786 |
| ApaI | GGGCCC | 1 cut(s) | 1444 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 1294, 1326, 3175, 3207, 4180, 4212, 5072, 5104 |
| AseI | ATTAAT | 4 cut(s) | 3297, 4443, 5598, 5709 |
| AsiGI | ACCGGT | 1 cut(s) | 5126 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1124, 2988, 3915, 5885 |
| Asp718I | GGTACC | 2 cut(s) | 1104, 4426 |
| AspLEI | GCGC | 4 cut(s) | 244, 2556, 3055, 4526 |
| AsuC2I | CCSGG | 2 cut(s) | 4724, 5568 |
| AvaI | CYCGRG | 1 cut(s) | 2973 |
| AvaII | GGWCC | 8 cut(s) | 49, 77, 1136, 1889, 1994, 2186, 3990, 5080 |
| BaeGI | GKGCMC | 2 cut(s) | 1444, 4705 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 936, 969, 1010, 1043, 5174, 5207 |
| BalI | TGGCCA | 4 cut(s) | 960, 2379, 4185, 4788 |
| BamHI | GGATCC | 1 cut(s) | 3901 |
| BanI | GGYRCC | 5 cut(s) | 1104, 1745, 4084, 4426, 4700 |
| BanII | GRGCYC | 4 cut(s) | 74, 1444, 3807, 4639 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4147, 4179 |
| BbsI | GAAGAC | 1 cut(s) | 3634 |
| Bbv12I | GWGCWC | 5 cut(s) | 74, 1602, 2700, 3807, 4639 |
| BbvCI | CCTCAGC | 1 cut(s) | 5796 |
| BceAI | ACGGC | 5 cut(s) | 72, 817, 3066, 3732, 5092 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 5156, 5190 |
| BciT130I | CCWGG | 7 cut(s) | 1438, 1565, 1578, 2154, 3489, 3615, 5369 |
| BclI | TGATCA | 2 cut(s) | 1381, 5248 |
| BcnI | CCSGG | 2 cut(s) | 4724, 5568 |
| BcuI | ACTAGT | 1 cut(s) | 221 |
| BfaI | CTAG | 9 cut(s) | 222, 575, 2102, 2450, 2855, 2981, 3927, 4496, 5890 |
| BfoI | RGCGCY | 2 cut(s) | 3056, 4527 |
| BfrI | CTTAAG | 1 cut(s) | 4613 |
| BfuAI | ACCTGC | 1 cut(s) | 2048 |
| BglII | AGATCT | 3 cut(s) | 3584, 3977, 5690 |
| BlpI | GCTNAGC | 1 cut(s) | 2042 |
| BmcAI | AGTACT | 1 cut(s) | 4798 |
| Bme1390I | CCNGG | 9 cut(s) | 1438, 1565, 1578, 2154, 3489, 3615, 4724, 5369, 5568 |
| Bme18I | GGWCC | 8 cut(s) | 49, 77, 1136, 1889, 1994, 2186, 3990, 5080 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2000 |
| BmeT110I | CYCGRG | 1 cut(s) | 2973 |
| BmgBI | CACGTC | 1 cut(s) | 5459 |
| BmrFI | CCNGG | 9 cut(s) | 1438, 1565, 1578, 2154, 3489, 3615, 4724, 5369, 5568 |
| BmrI | ACTGGG | 1 cut(s) | 5735 |
| BmuI | ACTGGG | 1 cut(s) | 5735 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3598 |
| BpiI | GAAGAC | 1 cut(s) | 3634 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 5767, 5799 |
| BpmI | CTGGAG | 6 cut(s) | 333, 1228, 2613, 2955, 4857, 5045 |
| Bpu10I | CCTNAGC | 3 cut(s) | 545, 1491, 5796 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2042 |
| BpuEI | CTTGAG | 4 cut(s) | 695, 801, 1337, 3292 |
| BpuMI | CCSGG | 2 cut(s) | 4724, 5568 |
| Bsa29I | ATCGAT | 1 cut(s) | 847 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2379 |
| BsaHI | GRCGYC | 3 cut(s) | 59, 93, 3176 |
| BsaI | GGTCTC | 1 cut(s) | 564 |
| BsaWI | WCCGGW | 4 cut(s) | 127, 4555, 5126, 5683 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3645, 3675 |
| Bse118I | RCCGGY | 1 cut(s) | 5126 |
| Bse3DI | GCAATG | 4 cut(s) | 84, 2804, 3996, 4626 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2379 |
| BseAI | TCCGGA | 1 cut(s) | 4555 |
| BseBI | CCWGG | 7 cut(s) | 1438, 1565, 1578, 2154, 3489, 3615, 5369 |
| BseCI | ATCGAT | 1 cut(s) | 847 |
| BseJI | GATNNNNATC | 1 cut(s) | 2379 |
| BseMI | GCAATG | 4 cut(s) | 84, 2804, 3996, 4626 |
| BseMII | CTCAG | 5 cut(s) | 536, 1143, 3908, 4682, 5810 |
| BseRI | GAGGAG | 5 cut(s) | 3075, 4125, 4436, 5256, 5878 |
| BseSI | GKGCMC | 2 cut(s) | 1444, 4705 |
| BseYI | CCCAGC | 6 cut(s) | 1654, 2329, 3200, 5482, 5524, 5764 |
| BsgI | GTGCAG | 1 cut(s) | 792 |
| Bsh1236I | CGCG | 2 cut(s) | 244, 2358 |
| Bsh1285I | CGRYCG | 1 cut(s) | 132 |
| BshFI | GGCC | 8 cut(s) | 960, 1442, 2379, 2739, 3522, 3747, 4185, 4788 |
| BshNI | GGYRCC | 5 cut(s) | 1104, 1745, 4084, 4426, 4700 |
| BshTI | ACCGGT | 1 cut(s) | 5126 |
| BshVI | ATCGAT | 1 cut(s) | 847 |
| BsiEI | CGRYCG | 1 cut(s) | 132 |
| BsiHKAI | GWGCWC | 5 cut(s) | 74, 1602, 2700, 3807, 4639 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2973 |
| BsiSI | CCGG | 6 cut(s) | 128, 4556, 4724, 5127, 5568, 5684 |
| BsmBI | CGTCTC | 2 cut(s) | 840, 1331 |
| BsmI | GAATGC | 4 cut(s) | 2046, 2427, 3724, 4329 |
| BsnI | GGCC | 8 cut(s) | 960, 1442, 2379, 2739, 3522, 3747, 4185, 4788 |
| Bso31I | GGTCTC | 1 cut(s) | 564 |
| BsoBI | CYCGRG | 1 cut(s) | 2973 |
| Bsp120I | GGGCCC | 1 cut(s) | 1440 |
| Bsp1286I | GDGCHC | 7 cut(s) | 74, 1444, 1602, 2700, 3807, 4639, 4705 |
| Bsp13I | TCCGGA | 1 cut(s) | 4555 |
| Bsp1407I | TGTACA | 2 cut(s) | 2744, 3394 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2042 |
| BspACI | CCGC | 8 cut(s) | 244, 558, 2027, 2039, 2358, 2506, 5084, 5404 |
| BspANI | GGCC | 8 cut(s) | 960, 1442, 2379, 2739, 3522, 3747, 4185, 4788 |
| BspCNI | CTCAG | 5 cut(s) | 537, 1142, 3907, 4681, 5809 |
| BspDI | ATCGAT | 1 cut(s) | 847 |
| BspEI | TCCGGA | 1 cut(s) | 4555 |
| BspFNI | CGCG | 2 cut(s) | 244, 2358 |
| BspMAI | CTGCAG | 1 cut(s) | 2395 |
| BspMI | ACCTGC | 1 cut(s) | 2048 |
| BspPI | GGATC | 9 cut(s) | 186, 1034, 3279, 3377, 3896, 3909, 5124, 5269, 5456 |
| BspQI | GCTCTTC | 1 cut(s) | 3939 |
| BspT107I | GGYRCC | 5 cut(s) | 1104, 1745, 4084, 4426, 4700 |
| BspTI | CTTAAG | 1 cut(s) | 4613 |
| BspTNI | GGTCTC | 1 cut(s) | 564 |
| BsrBI | CCGCTC | 1 cut(s) | 5404 |
| BsrDI | GCAATG | 4 cut(s) | 84, 2804, 3996, 4626 |
| BsrFI | RCCGGY | 1 cut(s) | 5126 |
| BsrGI | TGTACA | 2 cut(s) | 2744, 3394 |
| BssAI | RCCGGY | 1 cut(s) | 5126 |
| BssNI | GRCGYC | 3 cut(s) | 59, 93, 3176 |
| BssT1I | CCWWGG | 1 cut(s) | 5193 |
| Bst2UI | CCWGG | 7 cut(s) | 1438, 1565, 1578, 2154, 3489, 3615, 5369 |
| Bst6I | CTCTTC | 5 cut(s) | 871, 1525, 1947, 3939, 4476 |
| BstACI | GRCGYC | 3 cut(s) | 59, 93, 3176 |
| BstAFI | CTTAAG | 1 cut(s) | 4613 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 484 |
| BstAUI | TGTACA | 2 cut(s) | 2744, 3394 |
| BstC8I | GCNNGC | 7 cut(s) | 402, 464, 958, 1253, 1798, 2391, 4327 |
| BstDSI | CCRYGG | 2 cut(s) | 802, 5108 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1047, 4986 |
| BstFNI | CGCG | 2 cut(s) | 244, 2358 |
| BstH2I | RGCGCY | 2 cut(s) | 3056, 4527 |
| BstHHI | GCGC | 4 cut(s) | 244, 2556, 3055, 4526 |
| BstMCI | CGRYCG | 1 cut(s) | 132 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 293, 406, 484, 555, 2498, 3406, 4457, 4523 |
| BstNI | CCWGG | 7 cut(s) | 1438, 1565, 1578, 2154, 3489, 3615, 5369 |
| BstNSI | RCATGY | 3 cut(s) | 2465, 3266, 4329 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3598 |
| BstSCI | CCNGG | 9 cut(s) | 1436, 1563, 1576, 2152, 3487, 3613, 4722, 5367, 5566 |
| BstSLI | GKGCMC | 2 cut(s) | 1444, 4705 |
| BstUI | CGCG | 2 cut(s) | 244, 2358 |
| BstV2I | GAAGAC | 1 cut(s) | 3634 |
| BstX2I | RGATCY | 6 cut(s) | 3584, 3901, 3977, 5116, 5261, 5690 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1902, 2078, 4122 |
| BstYI | RGATCY | 6 cut(s) | 3584, 3901, 3977, 5116, 5261, 5690 |
| Bsu15I | ATCGAT | 1 cut(s) | 847 |
| BsuRI | GGCC | 8 cut(s) | 960, 1442, 2379, 2739, 3522, 3747, 4185, 4788 |
| BsuTUI | ATCGAT | 1 cut(s) | 847 |
| BtgI | CCRYGG | 2 cut(s) | 802, 5108 |
| BtrI | CACGTC | 1 cut(s) | 5459 |
| BtsI | GCAGTG | 3 cut(s) | 226, 1807, 3688 |
| BveI | ACCTGC | 1 cut(s) | 2048 |
| Cac8I | GCNNGC | 7 cut(s) | 402, 464, 958, 1253, 1798, 2391, 4327 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2111, 5264, 5585 |
| CfoI | GCGC | 4 cut(s) | 244, 2556, 3055, 4526 |
| Cfr10I | RCCGGY | 1 cut(s) | 5126 |
| ClaI | ATCGAT | 1 cut(s) | 847 |
| CseI | GACGC | 3 cut(s) | 48, 2167, 3165 |
| CsiI | ACCWGGT | 1 cut(s) | 3487 |
| CspAI | ACCGGT | 1 cut(s) | 5126 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 3417, 3452, 4062, 4097 |
| DraI | TTTAAA | 1 cut(s) | 4770 |
| DraIII | CACNNNGTG | 1 cut(s) | 4592 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2000 |
| EaeI | YGGCCR | 5 cut(s) | 958, 2377, 3745, 4183, 4786 |
| Eam1104I | CTCTTC | 5 cut(s) | 871, 1525, 1947, 3939, 4476 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2000 |
| EarI | CTCTTC | 5 cut(s) | 871, 1525, 1947, 3939, 4476 |
| Ecl136II | GAGCTC | 3 cut(s) | 72, 3805, 4637 |
| Eco130I | CCWWGG | 1 cut(s) | 5193 |
| Eco147I | AGGCCT | 1 cut(s) | 2739 |
| Eco24I | GRGCYC | 4 cut(s) | 74, 1444, 3807, 4639 |
| Eco31I | GGTCTC | 1 cut(s) | 564 |
| Eco32I | GATATC | 3 cut(s) | 580, 3304, 4692 |
| Eco47I | GGWCC | 8 cut(s) | 49, 77, 1136, 1889, 1994, 2186, 3990, 5080 |
| Eco53kI | GAGCTC | 3 cut(s) | 72, 3805, 4637 |
| Eco57I | CTGAAG | 9 cut(s) | 128, 852, 1506, 3573, 3628, 3891, 4155, 4738, 4866 |
| Eco88I | CYCGRG | 1 cut(s) | 2973 |
| EcoICRI | GAGCTC | 3 cut(s) | 72, 3805, 4637 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1047, 4986 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1441 |
| EcoRI | GAATTC | 3 cut(s) | 357, 1258, 2520 |
| EcoRII | CCWGG | 7 cut(s) | 1436, 1563, 1576, 2152, 3487, 3613, 5367 |
| EcoRV | GATATC | 3 cut(s) | 580, 3304, 4692 |
| EcoT14I | CCWWGG | 1 cut(s) | 5193 |
| EcoT22I | ATGCAT | 5 cut(s) | 1417, 1879, 3582, 4066, 4331 |
| EcoT38I | GRGCYC | 4 cut(s) | 74, 1444, 3807, 4639 |
| ErhI | CCWWGG | 1 cut(s) | 5193 |
| Esp3I | CGTCTC | 2 cut(s) | 840, 1331 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 374, 406 |
| FauI | CCCGC | 3 cut(s) | 551, 5091, 5397 |
| FauNDI | CATATG | 6 cut(s) | 904, 3676, 3933, 4180, 4519, 5666 |
| FbaI | TGATCA | 2 cut(s) | 1381, 5248 |
| FblI | GTMKAC | 3 cut(s) | 1028, 2848, 3120 |
| FriOI | GRGCYC | 4 cut(s) | 74, 1444, 3807, 4639 |
| FspBI | CTAG | 9 cut(s) | 222, 575, 2102, 2450, 2855, 2981, 3927, 4496, 5890 |
| GlaI | GCGC | 4 cut(s) | 243, 2555, 3054, 4525 |
| GsaI | CCCAGC | 6 cut(s) | 1658, 2333, 3204, 5486, 5528, 5768 |
| GsuI | CTGGAG | 6 cut(s) | 333, 1228, 2613, 2955, 4857, 5045 |
| HaeII | RGCGCY | 2 cut(s) | 3056, 4527 |
| HaeIII | GGCC | 8 cut(s) | 960, 1442, 2379, 2739, 3522, 3747, 4185, 4788 |
| HapII | CCGG | 6 cut(s) | 128, 4556, 4724, 5127, 5568, 5684 |
| HgaI | GACGC | 3 cut(s) | 48, 2167, 3165 |
| HhaI | GCGC | 4 cut(s) | 244, 2556, 3055, 4526 |
| Hin1I | GRCGYC | 3 cut(s) | 59, 93, 3176 |
| Hin6I | GCGC | 4 cut(s) | 242, 2554, 3053, 4524 |
| HinP1I | GCGC | 4 cut(s) | 242, 2554, 3053, 4524 |
| HincII | GTYRAC | 3 cut(s) | 883, 2212, 3425 |
| HindII | GTYRAC | 3 cut(s) | 883, 2212, 3425 |
| HindIII | AAGCTT | 4 cut(s) | 383, 2281, 2598, 4884 |
| HpaII | CCGG | 6 cut(s) | 128, 4556, 4724, 5127, 5568, 5684 |
| Hpy99I | CGWCG | 4 cut(s) | 64, 629, 1104, 5555 |
| HpyCH4IV | ACGT | 6 cut(s) | 93, 624, 2473, 4121, 5458, 5553 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 293, 406, 484, 555, 2498, 3406, 4457, 4523 |
| HpySE526I | ACGT | 6 cut(s) | 93, 624, 2473, 4121, 5458, 5553 |
| Hsp92I | GRCGYC | 3 cut(s) | 59, 93, 3176 |
| HspAI | GCGC | 4 cut(s) | 242, 2554, 3053, 4524 |
| Kpn2I | TCCGGA | 1 cut(s) | 4555 |
| KpnI | GGTACC | 2 cut(s) | 1108, 4430 |
| Ksp22I | TGATCA | 2 cut(s) | 1381, 5248 |
| LguI | GCTCTTC | 1 cut(s) | 3939 |
| MabI | ACCWGGT | 1 cut(s) | 3487 |
| MaeI | CTAG | 9 cut(s) | 222, 575, 2102, 2450, 2855, 2981, 3927, 4496, 5890 |
| MaeII | ACGT | 6 cut(s) | 93, 624, 2473, 4121, 5458, 5553 |
| MbiI | CCGCTC | 1 cut(s) | 5404 |
| MfeI | CAATTG | 4 cut(s) | 255, 2120, 2439, 2574 |
| MflI | RGATCY | 6 cut(s) | 3584, 3901, 3977, 5116, 5261, 5690 |
| MhlI | GDGCHC | 7 cut(s) | 74, 1444, 1602, 2700, 3807, 4639, 4705 |
| MlsI | TGGCCA | 4 cut(s) | 960, 2379, 4185, 4788 |
| MluNI | TGGCCA | 4 cut(s) | 960, 2379, 4185, 4788 |
| MmeI | TCCRAC | 8 cut(s) | 1445, 2112, 2673, 3055, 3879, 4656, 5094, 5263 |
| Mox20I | TGGCCA | 4 cut(s) | 960, 2379, 4185, 4788 |
| Mph1103I | ATGCAT | 5 cut(s) | 1417, 1879, 3582, 4066, 4331 |
| MroI | TCCGGA | 1 cut(s) | 4555 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1124, 2988, 3915, 5885 |
| MscI | TGGCCA | 4 cut(s) | 960, 2379, 4185, 4788 |
| MslI | CAYNNNNRTG | 9 cut(s) | 968, 1115, 1900, 2076, 2166, 2466, 3261, 3873, 3936 |
| Msp20I | TGGCCA | 4 cut(s) | 960, 2379, 4185, 4788 |
| MspA1I | CMGCKG | 3 cut(s) | 481, 776, 4910 |
| MspCI | CTTAAG | 1 cut(s) | 4613 |
| MspI | CCGG | 6 cut(s) | 128, 4556, 4724, 5127, 5568, 5684 |
| MspR9I | CCNGG | 9 cut(s) | 1438, 1565, 1578, 2154, 3489, 3615, 4724, 5369, 5568 |
| MunI | CAATTG | 4 cut(s) | 255, 2120, 2439, 2574 |
| Mva1269I | GAATGC | 4 cut(s) | 2046, 2427, 3724, 4329 |
| MvaI | CCWGG | 7 cut(s) | 1438, 1565, 1578, 2154, 3489, 3615, 5369 |
| MvnI | CGCG | 2 cut(s) | 244, 2358 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 293, 406, 484, 555, 2498, 3406, 4457, 4523 |
| NciI | CCSGG | 2 cut(s) | 4724, 5568 |
| NdeI | CATATG | 6 cut(s) | 904, 3676, 3933, 4180, 4519, 5666 |
| NmeAIII | GCCGAG | 2 cut(s) | 1901, 4414 |
| NsiI | ATGCAT | 5 cut(s) | 1417, 1879, 3582, 4066, 4331 |
| NspI | RCATGY | 3 cut(s) | 2465, 3266, 4329 |
| PaeI | GCATGC | 1 cut(s) | 4329 |
| PaeR7I | CTCGAG | 1 cut(s) | 2973 |
| PaqCI | CACCTGC | 1 cut(s) | 2048 |
| PasI | CCCWGGG | 2 cut(s) | 1437, 2153 |
| PceI | AGGCCT | 1 cut(s) | 2739 |
| PciI | ACATGT | 1 cut(s) | 2461 |
| PciSI | GCTCTTC | 1 cut(s) | 3939 |
| PctI | GAATGC | 4 cut(s) | 2046, 2427, 3724, 4329 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1124, 2988, 3915, 5885 |
| PfeI | GAWTC | 9 cut(s) | 322, 998, 1613, 2969, 4175, 5315, 5329, 5496, 5780 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 2329, 3530, 4835, 5531 |
| PinAI | ACCGGT | 1 cut(s) | 5126 |
| PscI | ACATGT | 1 cut(s) | 2461 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3598 |
| PshBI | ATTAAT | 4 cut(s) | 3297, 4443, 5598, 5709 |
| PsiI | TTATAA | 1 cut(s) | 5360 |
| Psp124BI | GAGCTC | 3 cut(s) | 74, 3807, 4639 |
| Psp6I | CCWGG | 7 cut(s) | 1436, 1563, 1576, 2152, 3487, 3613, 5367 |
| PspFI | CCCAGC | 6 cut(s) | 1654, 2329, 3200, 5482, 5524, 5764 |
| PspGI | CCWGG | 7 cut(s) | 1436, 1563, 1576, 2152, 3487, 3613, 5367 |
| PspOMI | GGGCCC | 1 cut(s) | 1440 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2388, 2420 |
| PstI | CTGCAG | 1 cut(s) | 2395 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2111, 5264, 5585 |
| PsuI | RGATCY | 6 cut(s) | 3584, 3901, 3977, 5116, 5261, 5690 |
| PvuII | CAGCTG | 3 cut(s) | 481, 776, 4910 |
| RseI | CAYNNNNRTG | 9 cut(s) | 968, 1115, 1900, 2076, 2166, 2466, 3261, 3873, 3936 |
| SacI | GAGCTC | 3 cut(s) | 74, 3807, 4639 |
| SapI | GCTCTTC | 1 cut(s) | 3939 |
| ScaI | AGTACT | 1 cut(s) | 4798 |
| ScrFI | CCNGG | 9 cut(s) | 1438, 1565, 1578, 2154, 3489, 3615, 4724, 5369, 5568 |
| SduI | GDGCHC | 7 cut(s) | 74, 1444, 1602, 2700, 3807, 4639, 4705 |
| SexAI | ACCWGGT | 1 cut(s) | 3487 |
| Sfr274I | CTCGAG | 1 cut(s) | 2973 |
| SinI | GGWCC | 8 cut(s) | 49, 77, 1136, 1889, 1994, 2186, 3990, 5080 |
| SlaI | CTCGAG | 1 cut(s) | 2973 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 968, 1115, 1900, 2076, 2166, 2466, 3261, 3873, 3936 |
| SmlI | CTYRAG | 6 cut(s) | 674, 816, 1352, 2973, 3307, 4613 |
| SmoI | CTYRAG | 6 cut(s) | 674, 816, 1352, 2973, 3307, 4613 |
| SpeI | ACTAGT | 1 cut(s) | 221 |
| SphI | GCATGC | 1 cut(s) | 4329 |
| SseBI | AGGCCT | 1 cut(s) | 2739 |
| SsiI | CCGC | 8 cut(s) | 244, 558, 2027, 2039, 2358, 2506, 5084, 5404 |
| SspI | AATATT | 3 cut(s) | 100, 3253, 4077 |
| SspMI | CTAG | 9 cut(s) | 222, 575, 2102, 2450, 2855, 2981, 3927, 4496, 5890 |
| SstI | GAGCTC | 3 cut(s) | 74, 3807, 4639 |
| StuI | AGGCCT | 1 cut(s) | 2739 |
| StyD4I | CCNGG | 9 cut(s) | 1436, 1563, 1576, 2152, 3487, 3613, 4722, 5367, 5566 |
| StyI | CCWWGG | 1 cut(s) | 5193 |
| TaiI | ACGT | 6 cut(s) | 96, 627, 2476, 4124, 5461, 5556 |
| TaqI | TCGA | 7 cut(s) | 132, 274, 412, 847, 2974, 3225, 5550 |
| TatI | WGTACW | 3 cut(s) | 2744, 3394, 4796 |
| TauI | GCSGC | 1 cut(s) | 2030 |
| TfiI | GAWTC | 9 cut(s) | 322, 998, 1613, 2969, 4175, 5315, 5329, 5496, 5780 |
| TspGWI | ACGGA | 4 cut(s) | 407, 791, 2500, 4270 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 2329, 3530, 4835, 5531 |
| Vha464I | CTTAAG | 1 cut(s) | 4613 |
| VpaK11BI | GGWCC | 8 cut(s) | 49, 77, 1136, 1889, 1994, 2186, 3990, 5080 |
| VspI | ATTAAT | 4 cut(s) | 3297, 4443, 5598, 5709 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1047, 4986 |
| XceI | RCATGY | 3 cut(s) | 2465, 3266, 4329 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 846, 5302, 5671 |
| XhoI | CTCGAG | 1 cut(s) | 2973 |
| XmiI | GTMKAC | 3 cut(s) | 1028, 2848, 3120 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1124, 2988, 3915, 5885 |
| XspI | CTAG | 9 cut(s) | 222, 575, 2102, 2450, 2855, 2981, 3927, 4496, 5890 |
| ZraI | GACGTC | 1 cut(s) | 94 |
| ZrmI | AGTACT | 1 cut(s) | 4798 |
| Zsp2I | ATGCAT | 5 cut(s) | 1417, 1879, 3582, 4066, 4331 |