Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0009033

Physical Location & Seq

Genomic Coordinates Forward (+)

27195540 .. 27201365

Gene Structure 5826 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G314700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2361 bp

ATGGAGCCCGAGTCTGGAATTTCGACGCCTTCCCGCAATCCTCCTCCTCAGCTTTCATGGGTGAATCTCTCCAGAAATCTAATACTTGCTTATCAAAGCCTTGGCGTGGTTTATGGGGACCTGAGTACTTCTCCTCTCTATGTTTATACTAGCACATTCATAGGGAAGTTGCAGAACCATAATAATGAGGAAGTGATATTTGGTGCATTTTCCTTAATTTTCTGGACTCTTACACTGATACCCTTGCTGAAGTATGTCTTCATCCTATTGAGTGCTGACGATAATGGTGAAGGTGGGACATTTGCTCTTTACTCATTGCTTTGCCGCCATGCAAAGTTTAGTTTACTTCCCAACCAACAAGCAGCTGATGAGGAGCTCACAGCTTACAAATACGGTCCCTCATCACAGGTTGTAGCCTCTTCCCCATTAAAAAGATTTTTGGAGAAGCATAAAAGGTTACGGACAGCCCTACTAGTGGTGGTATTATTAGGAGCTTGCATGGTCATAGGAGATGGTGTGCTCACTCCAGCAATTTCAGTTTTGTCATCAGTATCAGGGTTACAAGTTACAGAGGAGAAATTAACTGATGGTGAACTCCTCTTGCTTGCCTGTGTCATATTGGTTGGCCTGTTTGCTCTGCAGCATTGTGGCACCCACAGGGTAGCATTTTTGTTTGCACCTATTGTAATAATCTGGTTGATATCAATATTTGCCATTGGCCTGTACAACACAATACATTGGAACCCAGCTATTGTTCGTGCATTGTCGCCCCACTATATTGTCAAGTTTTTCCGTGAAACTGGTAAAGATGGTTGGATTTCTCTTGGTGGGATTCTCCTCTCAATAACTGGTACTGAAGCCATGTTTGCAGATCTTGGACATTTCACTGCCTTATCGATAAGGCTTGCGTTTGCATTCATTATATATCCTTGTTTGGTAGTACAATACATGGGTCAAGCTGCTTTCCTATCTAAACATCCCAACTGCATTCGTTACAGTTTCTATGACTCAATACCTGAGCCTGTATTTTGGCCCGTCTTTGTTGTTGCTACCCTTGCAACAATTGTTGGGAGCCAGGCTGTTATAACCGCTACTTTCTCCATCATCAAGCAATGTCATGCCCTTGGTTGCTTCCCGCGAGTCAAAGTTGTCCACACCTCAAAACATATATATGGGCAGATCTACATCCCAGAAATTAATTGGATACTTATGATCCTCACTCTTGCGATAACTATTGGATTCCAAGACACGACTTTAATTGGAAATGCATATGGACTTGCTTGCATGATGGTTATGTTTATCACGACGTTCCTTATGGCACTTGTAATAGTCTTTGTTTGGCAGAAAAGTGTGGTTCTGGCTGCAGTTTTTCTGATTTTCTTCTGGTTCATTGAGGGAGTCTACTTATCAGCAGCACTCATTAAAGTGCCTCAGGGAGGATGGGTCCCTTTTGTTCTCTCGTTCATCTTTATGATCGTTATGTATGTCTGGCATTATGGTACGCGGAAGAAGTATAACTACGATCTGCACAACAAAGTTTCATTAAAATGGTTACTTGGCCTTGGCCCCAGCCTCGGTATAGTCCGCGTGCCTGGGATAGGCCTCATATACTCAGAGTTGGCAACAGGAGTTCCTGCAATATTCTCTCACTTTGTAACAAATCTTCCTGCATTTCACAAGGTGTTGGTTTTTGTTTGTGTAAAATCAGTTCCAGTTCCAAGTGTTTCACCTGAAGAGCGATTTCTGATTGGCCGGATTTGTCCAAGGCCTTACCGTATGTATAGGTGCATCGTCAGGTATGGGTACAAGGACATTCAACGGGATGATGGAGACTTTGAGAACCAGCTCATCCAAAGCATAGCAGAGTTCATCCAGATGGAAGCAGTGGAACCACAGTTCTCAAGCTCTGAGAGCGCATCATTTGATGGAAGGATGGCTGTGATAAGCACCAGGACGGGGCAATCGAGTTCGAGCTTAATAGCGAATGAGCAAGAGGTTTTTGGTGTGAGCGACTCCATCCAAAGCAGCAAATCTTTGACCCTCCAGAGTATAGGATCAGTGTATGATGATGAGAACCCACAAATCAGGAGGCGCCAAGTAAGGTTTCAGCTTCCCTCAAACCCAGGTATGGATCCTGCAGTGAGGGAAGAGCTGATGGATTTAATCCAGGCCAAGGAAGCAGGGGTGGCTTATATAATGGGGCATTCATATGTGAAGGCGAGGAGATCATCGTCGTATCTGAAGAAGCTTGTGATTGATATGGGGTATTCATTTCTTAGGAAGAACTGCAGGGGACCTGCTGTGGCACTTAACATTCCTCACATCAGTCTTATCGAAGTTGGGATGATATACTATGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009653 GO:0009826 GO:0009932 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0016043 GO:0016049 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0032502 GO:0032989 GO:0034220 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0048589 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0055085 GO:0060560 GO:0071804 GO:0071805 GO:0071840 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

787

Amino Acids

87.53

Weight (kDa)

8.68

Isoelectric Point (pI)

45.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009033)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02050
fragaria_vesca	FvH4_6g54410 FvH4_6g54410
malus_domestica	MD09G1001500.v1.1 MD17G1005100.v1.1
prunus_persica	Prupe.3G314700_v2.0.a1 Prupe.3G314700_v2.0.a1
pyrus_communis	pycom17g00130
rosa_chinensis	RchiOBHm_Chr2g0176661
rosa_laevigata	RLG00000022433
rosa_multiflora	Rmu_co8314729.1_g000001 Rmu_co8416913.1_g000001 Rmu_sc0001417.1_g000018 Rmu_sc0012494.1_g000001 Rmu_ssc0000468.1_g000012
rosa_rugosa	Rorug02G0597400
rosa_samantha	Rh2AG674700 Rh2BG685800 Rh2CG649100 Rh2DG700000
rosa_wichuraiana	Rw0G015660 Rw2G055370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1085
Acc36I	ACCTGC	1 cut(s)	2305
AccB1I	GGYRCC	2 cut(s)	650, 2091
AccI	GTMKAC	1 cut(s)	1401
AccII	CGCG	3 cut(s)	1138, 1504, 1587
AciI	CCGC	6 cut(s)	34, 325, 1089, 1136, 1504, 1585
AclWI	GGATC	4 cut(s)	1207, 2062, 2126, 2139
AcoI	YGGCCR	1 cut(s)	1750
AcsI	RAATTY	1 cut(s)	18
AcuI	CTGAAG	4 cut(s)	269, 876, 1752, 2261
AcyI	GRCGYC	2 cut(s)	26, 2092
AdeI	CACNNNGTG	1 cut(s)	1681
AfaI	GTAC	6 cut(s)	127, 725, 853, 942, 1501, 1805
AfiI	CCNNNNNNNGG	9 cut(s)	14, 106, 475, 1436, 1574, 1598, 1956, 2128, 2173
AgsI	TTSAA	1 cut(s)	1817
AhlI	ACTAGT	1 cut(s)	472
AjnI	CCWGG	5 cut(s)	1074, 1591, 1949, 2122, 2166
AjuI	GAANNNNNNNTTGG	4 cut(s)	183, 215, 2088, 2120
AloI	GAACNNNNNNTCC	2 cut(s)	1880, 1912
Alw21I	GWGCWC	2 cut(s)	378, 522
Alw26I	GTCTC	1 cut(s)	1824
AlwI	GGATC	4 cut(s)	1207, 2062, 2126, 2139
Ama87I	CYCGRG	1 cut(s)	8
AoxI	GGCC	9 cut(s)	625, 718, 1031, 1558, 1564, 1600, 1750, 1766, 2169
ApeKI	GCWGC	6 cut(s)	362, 640, 959, 1361, 1412, 2025
ApoI	RAATTY	1 cut(s)	18
AseI	ATTAAT	1 cut(s)	1197
AspLEI	GCGC	2 cut(s)	1916, 2094
AspS9I	GGNCC	6 cut(s)	118, 395, 1032, 1444, 1565, 2294
AsuHPI	GGTGA	4 cut(s)	73, 299, 602, 1719
AvaI	CYCGRG	1 cut(s)	8
AvaII	GGWCC	4 cut(s)	118, 395, 1444, 2294
AxyI	CCTNAGG	1 cut(s)	1431
BamHI	GGATCC	1 cut(s)	2131
BanI	GGYRCC	2 cut(s)	650, 2091
BanII	GRGCYC	2 cut(s)	9, 378
BarI	GAAGNNNNNNTAC	4 cut(s)	1502, 1534, 1647, 1679
BbsI	GAAGAC	1 cut(s)	250
Bbv12I	GWGCWC	2 cut(s)	378, 522
BbvCI	CCTCAGC	1 cut(s)	48
BbvI	GCAGC	6 cut(s)	374, 652, 946, 1348, 1424, 2037
BciT130I	CCWGG	5 cut(s)	1076, 1593, 1951, 2124, 2168
BciVI	GTATCC	1 cut(s)	1197
BcoDI	GTCTC	1 cut(s)	1824
BcuI	ACTAGT	1 cut(s)	472
BfaI	CTAG	2 cut(s)	150, 473
BfmI	CTRYAG	4 cut(s)	638, 1362, 2136, 2287
BfoI	RGCGCY	1 cut(s)	2095
BfuAI	ACCTGC	1 cut(s)	2305
BfuI	GTATCC	1 cut(s)	1197
BglII	AGATCT	2 cut(s)	871, 1179
BisI	GCNGC	7 cut(s)	325, 363, 641, 960, 1362, 1413, 2026
BlsI	GCNGC	7 cut(s)	326, 364, 642, 961, 1363, 1414, 2027
BmcAI	AGTACT	1 cut(s)	127
Bme1390I	CCNGG	5 cut(s)	1076, 1593, 1951, 2124, 2168
Bme18I	GGWCC	4 cut(s)	118, 395, 1444, 2294
BmeT110I	CYCGRG	1 cut(s)	8
BmgT120I	GGNCC	6 cut(s)	118, 395, 1032, 1444, 1565, 2294
BmrFI	CCNGG	5 cut(s)	1076, 1593, 1951, 2124, 2168
BmsI	GCATC	2 cut(s)	1797, 1925
BpiI	GAAGAC	1 cut(s)	250
BplI	GAGNNNNNCTC	2 cut(s)	115, 147
BpmI	CTGGAG	3 cut(s)	55, 510, 2027
Bpu10I	CCTNAGC	2 cut(s)	48, 1017
BpuEI	CTTGAG	1 cut(s)	1885
Bsa29I	ATCGAT	1 cut(s)	896
BsaBI	GATNNNNATC	1 cut(s)	1184
BsaHI	GRCGYC	2 cut(s)	26, 2092
BsaJI	CCNNGG	8 cut(s)	100, 1123, 1561, 1573, 1592, 1763, 2122, 2172
BsaXI	ACNNNNNCTCC	5 cut(s)	26, 501, 531, 1428, 1458
Bsc4I	CCNNNNNNNGG	9 cut(s)	14, 106, 475, 1436, 1574, 1598, 1956, 2128, 2173
Bse1I	ACTGG	3 cut(s)	805, 853, 1712
Bse21I	CCTNAGG	1 cut(s)	1431
Bse3DI	GCAATG	2 cut(s)	314, 1118
Bse8I	GATNNNNATC	1 cut(s)	1184
BseBI	CCWGG	5 cut(s)	1076, 1593, 1951, 2124, 2168
BseCI	ATCGAT	1 cut(s)	896
BseDI	CCNNGG	8 cut(s)	100, 1123, 1561, 1573, 1592, 1763, 2122, 2172
BseJI	GATNNNNATC	1 cut(s)	1184
BseLI	CCNNNNNNNGG	9 cut(s)	14, 106, 475, 1436, 1574, 1598, 1956, 2128, 2173
BseMI	GCAATG	2 cut(s)	314, 1118
BseMII	CTCAG	6 cut(s)	62, 113, 1008, 1445, 1626, 1899
BseNI	ACTGG	3 cut(s)	805, 853, 1712
BseRI	GAGGAG	8 cut(s)	33, 36, 123, 386, 587, 587, 827, 2236
BseXI	GCAGC	6 cut(s)	374, 652, 946, 1348, 1424, 2037
BseYI	CCCAGC	2 cut(s)	745, 1568
BsgI	GTGCAG	1 cut(s)	1511
Bsh1236I	CGCG	3 cut(s)	1138, 1504, 1587
BshFI	GGCC	9 cut(s)	627, 720, 1033, 1560, 1566, 1602, 1752, 1768, 2171
BshNI	GGYRCC	2 cut(s)	650, 2091
BshVI	ATCGAT	1 cut(s)	896
BsiHKAI	GWGCWC	2 cut(s)	378, 522
BsiHKCI	CYCGRG	1 cut(s)	8
BsiSI	CCGG	1 cut(s)	1753
BslFI	GGGAC	5 cut(s)	131, 310, 381, 1430, 2307
BslI	CCNNNNNNNGG	9 cut(s)	14, 106, 475, 1436, 1574, 1598, 1956, 2128, 2173
BsmAI	GTCTC	1 cut(s)	1824
BsmFI	GGGAC	5 cut(s)	131, 310, 381, 1430, 2307
BsmI	GAATGC	3 cut(s)	914, 987, 2203
BsnI	GGCC	9 cut(s)	627, 720, 1033, 1560, 1566, 1602, 1752, 1768, 2171
BsoBI	CYCGRG	1 cut(s)	8
Bsp1286I	GDGCHC	3 cut(s)	9, 378, 522
Bsp1407I	TGTACA	1 cut(s)	723
Bsp143I	GATC	8 cut(s)	871, 1179, 1212, 1473, 1522, 2054, 2131, 2225
BspACI	CCGC	6 cut(s)	34, 325, 1089, 1136, 1504, 1585
BspANI	GGCC	9 cut(s)	627, 720, 1033, 1560, 1566, 1602, 1752, 1768, 2171
BspCNI	CTCAG	6 cut(s)	61, 114, 1009, 1444, 1625, 1900
BspDI	ATCGAT	1 cut(s)	896
BspFNI	CGCG	3 cut(s)	1138, 1504, 1587
BspMAI	CTGCAG	4 cut(s)	642, 1366, 2140, 2291
BspMI	ACCTGC	1 cut(s)	2305
BspPI	GGATC	4 cut(s)	1207, 2062, 2126, 2139
BspQI	GCTCTTC	2 cut(s)	1728, 2142
BspT107I	GGYRCC	2 cut(s)	650, 2091
BsrDI	GCAATG	2 cut(s)	314, 1118
BsrGI	TGTACA	1 cut(s)	723
BsrI	ACTGG	3 cut(s)	805, 853, 1712
BssECI	CCNNGG	8 cut(s)	100, 1123, 1561, 1573, 1592, 1763, 2122, 2172
BssMI	GATC	8 cut(s)	871, 1179, 1212, 1473, 1522, 2054, 2131, 2225
BssNI	GRCGYC	2 cut(s)	26, 2092
BssT1I	CCWWGG	5 cut(s)	100, 1123, 1561, 1763, 2172
Bst2UI	CCWGG	5 cut(s)	1076, 1593, 1951, 2124, 2168
Bst4CI	ACNGT	4 cut(s)	395, 998, 1775, 1896
Bst6I	CTCTTC	3 cut(s)	424, 1728, 2142
BstACI	GRCGYC	2 cut(s)	26, 2092
BstAUI	TGTACA	1 cut(s)	723
BstC8I	GCNNGC	5 cut(s)	496, 606, 906, 1282, 1589
BstDEI	CTNAG	7 cut(s)	48, 122, 1017, 1431, 1612, 1908, 2276
BstENI	CCTNNNNNAGG	2 cut(s)	1434, 1596
BstFNI	CGCG	3 cut(s)	1138, 1504, 1587
BstH2I	RGCGCY	1 cut(s)	2095
BstHHI	GCGC	2 cut(s)	1916, 2094
BstKTI	GATC	8 cut(s)	874, 1182, 1215, 1476, 1525, 2057, 2134, 2228
BstMAI	GTCTC	1 cut(s)	1824
BstMBI	GATC	8 cut(s)	871, 1179, 1212, 1473, 1522, 2054, 2131, 2225
BstMWI	GCNNNNNNNGC	5 cut(s)	866, 1055, 1911, 2177, 2186
BstNI	CCWGG	5 cut(s)	1076, 1593, 1951, 2124, 2168
BstSCI	CCNGG	5 cut(s)	1074, 1591, 1949, 2122, 2166
BstSFI	CTRYAG	4 cut(s)	638, 1362, 2136, 2287
BstUI	CGCG	3 cut(s)	1138, 1504, 1587
BstV1I	GCAGC	6 cut(s)	374, 652, 946, 1348, 1424, 2037
BstV2I	GAAGAC	1 cut(s)	250
BstX2I	RGATCY	3 cut(s)	871, 1179, 2131
BstYI	RGATCY	3 cut(s)	871, 1179, 2131
Bsu15I	ATCGAT	1 cut(s)	896
Bsu36I	CCTNAGG	1 cut(s)	1431
BsuI	GTATCC	1 cut(s)	1197
BsuRI	GGCC	9 cut(s)	627, 720, 1033, 1560, 1566, 1602, 1752, 1768, 2171
BsuTUI	ATCGAT	1 cut(s)	896
BtsI	GCAGTG	3 cut(s)	885, 1890, 2145
BtsIMutI	CAGTG	5 cut(s)	233, 885, 1890, 2064, 2145
BveI	ACCTGC	1 cut(s)	2305
Cac8I	GCNNGC	5 cut(s)	496, 606, 906, 1282, 1589
CfoI	GCGC	2 cut(s)	1916, 2094
Cfr13I	GGNCC	6 cut(s)	118, 395, 1032, 1444, 1565, 2294
ClaI	ATCGAT	1 cut(s)	896
CseI	GACGC	1 cut(s)	34
Csp6I	GTAC	6 cut(s)	126, 724, 852, 941, 1500, 1804
CviAII	CATG	7 cut(s)	57, 329, 499, 862, 949, 1118, 1285
CviQI	GTAC	6 cut(s)	126, 724, 852, 941, 1500, 1804
DdeI	CTNAG	7 cut(s)	48, 122, 1017, 1431, 1612, 1908, 2276
DinI	GGCGCC	1 cut(s)	2093
DpnI	GATC	8 cut(s)	873, 1181, 1214, 1475, 1524, 2056, 2133, 2227
DpnII	GATC	8 cut(s)	871, 1179, 1212, 1473, 1522, 2054, 2131, 2225
DraIII	CACNNNGTG	1 cut(s)	1681
EaeI	YGGCCR	1 cut(s)	1750
Eam1104I	CTCTTC	3 cut(s)	424, 1728, 2142
EarI	CTCTTC	3 cut(s)	424, 1728, 2142
Ecl136II	GAGCTC	1 cut(s)	376
Eco130I	CCWWGG	5 cut(s)	100, 1123, 1561, 1763, 2172
Eco147I	AGGCCT	2 cut(s)	1602, 1768
Eco24I	GRGCYC	2 cut(s)	9, 378
Eco32I	GATATC	1 cut(s)	702
Eco47I	GGWCC	4 cut(s)	118, 395, 1444, 2294
Eco53kI	GAGCTC	1 cut(s)	376
Eco57I	CTGAAG	4 cut(s)	269, 876, 1752, 2261
Eco81I	CCTNAGG	1 cut(s)	1431
Eco88I	CYCGRG	1 cut(s)	8
EcoICRI	GAGCTC	1 cut(s)	376
EcoNI	CCTNNNNNAGG	2 cut(s)	1434, 1596
EcoO109I	RGGNCCY	3 cut(s)	118, 1444, 2294
EcoRII	CCWGG	5 cut(s)	1074, 1591, 1949, 2122, 2166
EcoRV	GATATC	1 cut(s)	702
EcoT14I	CCWWGG	5 cut(s)	100, 1123, 1561, 1763, 2172
EcoT22I	ATGCAT	1 cut(s)	1270
EcoT38I	GRGCYC	2 cut(s)	9, 378
EgeI	GGCGCC	1 cut(s)	2093
EheI	GGCGCC	1 cut(s)	2093
ErhI	CCWWGG	5 cut(s)	100, 1123, 1561, 1763, 2172
FaeI	CATG	7 cut(s)	60, 332, 502, 865, 952, 1121, 1288
FalI	AAGNNNNNCTT	2 cut(s)	242, 274
FaqI	GGGAC	5 cut(s)	131, 310, 381, 1430, 2307
FatI	CATG	7 cut(s)	56, 328, 498, 861, 948, 1117, 1284
FauI	CCCGC	2 cut(s)	41, 1143
FauNDI	CATATG	2 cut(s)	1270, 2209
FblI	GTMKAC	1 cut(s)	1401
Fnu4HI	GCNGC	7 cut(s)	325, 363, 641, 960, 1362, 1413, 2026
FriOI	GRGCYC	2 cut(s)	9, 378
Fsp4HI	GCNGC	7 cut(s)	325, 363, 641, 960, 1362, 1413, 2026
FspBI	CTAG	2 cut(s)	150, 473
GlaI	GCGC	2 cut(s)	1915, 2093
GluI	GCNGC	7 cut(s)	325, 363, 641, 960, 1362, 1413, 2026
GsaI	CCCAGC	2 cut(s)	749, 1572
GsuI	CTGGAG	3 cut(s)	55, 510, 2027
HaeII	RGCGCY	1 cut(s)	2095
HaeIII	GGCC	9 cut(s)	627, 720, 1033, 1560, 1566, 1602, 1752, 1768, 2171
HapII	CCGG	1 cut(s)	1753
HgaI	GACGC	1 cut(s)	34
HhaI	GCGC	2 cut(s)	1916, 2094
Hin1I	GRCGYC	2 cut(s)	26, 2092
Hin1II	CATG	7 cut(s)	60, 332, 502, 865, 952, 1121, 1288
Hin6I	GCGC	2 cut(s)	1914, 2092
HinP1I	GCGC	2 cut(s)	1914, 2092
HindIII	AAGCTT	1 cut(s)	2246
HinfI	GANTC	9 cut(s)	11, 64, 226, 832, 1007, 1140, 1239, 1398, 2012
HpaII	CCGG	1 cut(s)	1753
HphI	GGTGA	4 cut(s)	73, 299, 602, 1719
Hpy166II	GTNNAC	4 cut(s)	344, 593, 1153, 1402
Hpy188I	TCNGA	6 cut(s)	1374, 1615, 1746, 1909, 2241, 2360
Hpy188III	TCNNGA	7 cut(s)	15, 72, 223, 1303, 1873, 2044, 2086
Hpy8I	GTNNAC	4 cut(s)	344, 593, 1153, 1402
Hpy99I	CGWCG	3 cut(s)	28, 1309, 2236
HpyAV	CCTTC	4 cut(s)	39, 284, 1923, 2209
HpyCH4III	ACNGT	4 cut(s)	395, 998, 1775, 1896
HpyCH4IV	ACGT	1 cut(s)	1307
HpyF10VI	GCNNNNNNNGC	5 cut(s)	866, 1055, 1911, 2177, 2186
HpyF3I	CTNAG	7 cut(s)	48, 122, 1017, 1431, 1612, 1908, 2276
HpySE526I	ACGT	1 cut(s)	1307
Hsp92I	GRCGYC	2 cut(s)	26, 2092
Hsp92II	CATG	7 cut(s)	60, 332, 502, 865, 952, 1121, 1288
HspAI	GCGC	2 cut(s)	1914, 2092
KasI	GGCGCC	1 cut(s)	2091
KflI	GGGWCCC	1 cut(s)	1444
Kzo9I	GATC	8 cut(s)	871, 1179, 1212, 1473, 1522, 2054, 2131, 2225
LguI	GCTCTTC	2 cut(s)	1728, 2142
LmnI	GCTCC	4 cut(s)	4, 373, 491, 1071
Lsp1109I	GCAGC	6 cut(s)	374, 652, 946, 1348, 1424, 2037
LweI	GCATC	2 cut(s)	1797, 1925
MaeI	CTAG	2 cut(s)	150, 473
MaeII	ACGT	1 cut(s)	1307
MaeIII	GTNAC	6 cut(s)	456, 558, 565, 992, 1551, 1654
MalI	GATC	8 cut(s)	873, 1181, 1214, 1475, 1524, 2056, 2133, 2227
MboI	GATC	8 cut(s)	871, 1179, 1212, 1473, 1522, 2054, 2131, 2225
MboII	GAAGA	9 cut(s)	250, 411, 1372, 1519, 1655, 1745, 2159, 2254, 2293
MfeI	CAATTG	1 cut(s)	1062
MflI	RGATCY	3 cut(s)	871, 1179, 2131
MhlI	GDGCHC	3 cut(s)	9, 378, 522
MluCI	AATT	8 cut(s)	18, 216, 531, 578, 1062, 1194, 1198, 1257
Mly113I	GGCGCC	1 cut(s)	2092
MlyI	GAGTC	6 cut(s)	20, 220, 1001, 1149, 1407, 2006
MmeI	TCCRAC	1 cut(s)	794
Mph1103I	ATGCAT	1 cut(s)	1270
MslI	CAYNNNNRTG	7 cut(s)	183, 1170, 1424, 1469, 1546, 1874, 2208
MspA1I	CMGCKG	1 cut(s)	365
MspI	CCGG	1 cut(s)	1753
MspR9I	CCNGG	5 cut(s)	1076, 1593, 1951, 2124, 2168
MunI	CAATTG	1 cut(s)	1062
Mva1269I	GAATGC	3 cut(s)	914, 987, 2203
MvaI	CCWGG	5 cut(s)	1076, 1593, 1951, 2124, 2168
MvnI	CGCG	3 cut(s)	1138, 1504, 1587
MwoI	GCNNNNNNNGC	5 cut(s)	866, 1055, 1911, 2177, 2186
NarI	GGCGCC	1 cut(s)	2092
NdeI	CATATG	2 cut(s)	1270, 2209
NdeII	GATC	8 cut(s)	871, 1179, 1212, 1473, 1522, 2054, 2131, 2225
NlaIII	CATG	7 cut(s)	60, 332, 502, 865, 952, 1121, 1288
NsiI	ATGCAT	1 cut(s)	1270
PceI	AGGCCT	2 cut(s)	1602, 1768
PciSI	GCTCTTC	2 cut(s)	1728, 2142
PcsI	WCGNNNNNNNCGW	1 cut(s)	1961
PctI	GAATGC	3 cut(s)	914, 987, 2203
PfeI	GAWTC	3 cut(s)	64, 832, 1239
PkrI	GCNGC	7 cut(s)	326, 364, 642, 961, 1363, 1414, 2027
PleI	GAGTC	6 cut(s)	19, 220, 1001, 1148, 1406, 2006
PluTI	GGCGCC	1 cut(s)	2095
PpsI	GAGTC	6 cut(s)	19, 220, 1001, 1148, 1406, 2006
PpuMI	RGGWCCY	3 cut(s)	118, 1444, 2294
PshBI	ATTAAT	1 cut(s)	1197
PsiI	TTATAA	1 cut(s)	1085
Psp124BI	GAGCTC	1 cut(s)	378
Psp5II	RGGWCCY	3 cut(s)	118, 1444, 2294
Psp6I	CCWGG	5 cut(s)	1074, 1591, 1949, 2122, 2166
PspFI	CCCAGC	2 cut(s)	745, 1568
PspGI	CCWGG	5 cut(s)	1074, 1591, 1949, 2122, 2166
PspPI	GGNCC	6 cut(s)	118, 395, 1032, 1444, 1565, 2294
PspPPI	RGGWCCY	3 cut(s)	118, 1444, 2294
PsrI	GAACNNNNNNTAC	2 cut(s)	1692, 1724
PstI	CTGCAG	4 cut(s)	642, 1366, 2140, 2291
PsuI	RGATCY	3 cut(s)	871, 1179, 2131
PvuII	CAGCTG	1 cut(s)	365
RsaI	GTAC	6 cut(s)	127, 725, 853, 942, 1501, 1805
RsaNI	GTAC	6 cut(s)	126, 724, 852, 941, 1500, 1804
RseI	CAYNNNNRTG	7 cut(s)	183, 1170, 1424, 1469, 1546, 1874, 2208
SacI	GAGCTC	1 cut(s)	378
SapI	GCTCTTC	2 cut(s)	1728, 2142
SatI	GCNGC	7 cut(s)	325, 363, 641, 960, 1362, 1413, 2026
Sau3AI	GATC	8 cut(s)	871, 1179, 1212, 1473, 1522, 2054, 2131, 2225
Sau96I	GGNCC	6 cut(s)	118, 395, 1032, 1444, 1565, 2294
ScaI	AGTACT	1 cut(s)	127
SchI	GAGTC	6 cut(s)	20, 220, 1001, 1149, 1407, 2006
ScrFI	CCNGG	5 cut(s)	1076, 1593, 1951, 2124, 2168
SduI	GDGCHC	3 cut(s)	9, 378, 522
SfaNI	GCATC	2 cut(s)	1797, 1925
SfcI	CTRYAG	4 cut(s)	638, 1362, 2136, 2287
SfoI	GGCGCC	1 cut(s)	2093
SinI	GGWCC	4 cut(s)	118, 395, 1444, 2294
SmiMI	CAYNNNNRTG	7 cut(s)	183, 1170, 1424, 1469, 1546, 1874, 2208
SmlI	CTYRAG	1 cut(s)	1900
SmoI	CTYRAG	1 cut(s)	1900
SpeI	ACTAGT	1 cut(s)	472
Sse9I	AATT	8 cut(s)	18, 216, 531, 578, 1062, 1194, 1198, 1257
SseBI	AGGCCT	2 cut(s)	1602, 1768
SsiI	CCGC	6 cut(s)	34, 325, 1089, 1136, 1504, 1585
SspDI	GGCGCC	1 cut(s)	2091
SspI	AATATT	2 cut(s)	708, 1641
SspMI	CTAG	2 cut(s)	150, 473
SstI	GAGCTC	1 cut(s)	378
StuI	AGGCCT	2 cut(s)	1602, 1768
StyD4I	CCNGG	5 cut(s)	1074, 1591, 1949, 2122, 2166
StyI	CCWWGG	5 cut(s)	100, 1123, 1561, 1763, 2172
TaaI	ACNGT	4 cut(s)	395, 998, 1775, 1896
TaiI	ACGT	1 cut(s)	1310
TaqI	TCGA	5 cut(s)	23, 896, 1964, 1970, 2334
TasI	AATT	8 cut(s)	18, 216, 531, 578, 1062, 1194, 1198, 1257
TatI	WGTACW	3 cut(s)	125, 723, 940
TauI	GCSGC	1 cut(s)	327
TfiI	GAWTC	3 cut(s)	64, 832, 1239
TscAI	CASTG	5 cut(s)	240, 892, 1890, 2064, 2145
TseI	GCWGC	6 cut(s)	362, 640, 959, 1361, 1412, 2025
TspGWI	ACGGA	2 cut(s)	475, 782
TspRI	CASTG	5 cut(s)	240, 892, 1890, 2064, 2145
VpaK11BI	GGWCC	4 cut(s)	118, 395, 1444, 2294
VspI	ATTAAT	1 cut(s)	1197
XagI	CCTNNNNNAGG	2 cut(s)	1434, 1596
XapI	RAATTY	1 cut(s)	18
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1197
XmiI	GTMKAC	1 cut(s)	1401
XspI	CTAG	2 cut(s)	150, 473
ZrmI	AGTACT	1 cut(s)	127
Zsp2I	ATGCAT	1 cut(s)	1270

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.