Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0009033

Physical Location & Seq

Genomic Coordinates Reverse (-)

94033 .. 98465

Gene Structure 4433 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g00130.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2373 bp

ATGGAGCCGGACTCTGCAATTTCGACGCCCTCCCGGAATCCTCCTCCTCTTCTTCCTCGTCAGCTTTCATGGGTGAATCTCTCCAGAAATCTCATACTTGCATATCAAAGCCTTGGCGTGGTTTATGGGGACCTTAGTACTTCTCCTCTCTATGTTTATACTAGCACATTCACAGGGAATCTACACAACCATAACTCTGAGGAAGTGATATTTGGTGCATTTTCCTTAATCTTCTGGACCATTACACTGGTACCCTTGCTCAAGTACGTCTTTATCCTATTGAGTGCTGACGATAATGGTGAAGGTGGGACTTTTGCGCTTTACTCGCTGCTTTGCCGCCATGCAAAGTTTAGTTTACTTCCCAACCAGCAAGCAGCTGATGAGGAGCTTTCAGCTTACAAATACGGTCCTTCATCACAGGTTGTAAGCTCTTCCCCATTAAAGAGATTTTTGGAGAAGCATAAAAGGTTACGGACAGCCCTACTAGTGGTGGTATTGTTAGGCACTTGCATGGTCATAGGAGATGGCGTGCTCACTCCAGCAATTTCAGTTTTATCATCGGTATCAGGGTTACAAGTTACAGAAGAGAAATTAACTGATGGTGAACTCCTCTTGCTGGCATGTGTCATATTGGTTGGCCTGTTTGCTTTGCAGCATTGTGGCACCCACAGGGTAGCATTTTTGTTTGCACCTATTGTAATAATCTGGTTGATATCGATATTTTCCATTGGGCTGTACAACACAATACAGTGGAACCCAGATATTGTTCATGCATTGTCGCCCCATTATATTATCAAGTTTTTCCATGAGACTGGTAAAGATGGTTGGATTTCTCTTGGTGGGATTCTTCTCTCAATAACTGGTACTGAAGCTATGTTTGCAGATCTTGGTCATTTCACTGCCTTATCGATAAGACTTGCGTTTGCATTTGCTATATATCCTTGTTTGGTAGTACAATACATGGGTCAAGCTGCTTTCCTGTCTAAACATCCTGGCTCCATTCGTTACAGTTTCTATGACTCCATACCTGTTCCTGTATTTTGGCCCGTCTTTGTTGTTGCTACCCTCGCATCAATTGTTGGAAGCCAGGCTGTTATAACTGCTACTTTCTCAATCATCAAGCAATGTCATGCCCTTGGTTGTTTCCCCCGAGTCAAAGTTGTCCACACCTCAAAGCATATATGTGGGCAGATCTACATTCCGGAAATTAATTGGATACTTATGATCCTTACTCTTGCCATAACTATTGGATTTCAAGACACTACTTTAATCGGAAATGCTTATGGACTTGCTTGCATGATGGTTATGTTTATCACGACATTCCTTATGGCGCTGGTAATAATCTTTGTTTGGCAGAAAAGTGTGGTCCTGGCTGCGATTTTTCTGATTTTTTTCTGGTTCATTGAGGGAGTGTACTTATCAGCAGCACTCATTAAAGTACCTCAGGGAGGATGGGTCCCTTTTGTTCTCTCGTTCATCTTTATGATTGTTATGTATGTCTGGCATTATGGTACACGGAAGAAGTATAACTATGATCTGCACAACAAAGTCTCGTTAAAATGGCTACTTGGTCTTGGCCCGAGCCTCGGTATCGTCCGGGTACCTGGGATAGGTCTCATATACTCAGAGTTGGCAACAGGAGTTCCTGCAATATTCTCTCACTTTGTAACAAATCTTCCTGCATTCCACAAGGTGTTGGTTTTTGTTTGTGTAAAATCAGTTCAGGTGCCATGGGTTTCACCTGAGGAACGATTTCTGATTGGCCGGATATGTCCAAGACCTTATCGTATGTATAGGTGCATTGTGAGGTATGGGTACAAGGACATCCAACGGGATGATGGGGACTTTGAGGACCTGCTCATACAGAGCATAGCAGAGTTCATCCAGATGGAAGCGGGGGAACCACAATTCTCAAGCCCAGAAAGCACATCATTTGATGGAAGGATGGCGGTTATAAGCACGAGGACGGTGCAATCAAGTTTGAGCTTGGTAGCTAGTGAACAAGAGGGTTCTGGTGTGGAGGACTCCATCCAAAGCAGCAAATCTTTGGCCCTGCGGAGTATGGGATCAGTGTATGATGATGAGAACCCACAAATGAGGAGGCACCAAGTGAGGTTTCAGGTGCCGTCAAATGTGGGTATGGATCCTGCAGTAAGGGAAGAGCTGATGGATTTAATCCAGGCCAGGGAAGCAGGGGTTGCGTATATAATGGGGCATTCATATGTGAAGGCGAGGAGGTCGTCATCATTTCTGAAGAAGCTTGTGATTGATATGGGGTATTCTTTTCTTAGGAAGAACTGCAGGGGCCCTGCCGTGGCGCTTAACATTCCTCACATCAGTCTTATCGAAGTTGGGATGATATACTATGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009653 GO:0009826 GO:0009932 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0016043 GO:0016049 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0032502 GO:0032989 GO:0034220 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0048589 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0055085 GO:0060560 GO:0071804 GO:0071805 GO:0071840 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

791

Amino Acids

87.92

Weight (kDa)

8.28

Isoelectric Point (pI)

43.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009033)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02050
fragaria_vesca	FvH4_6g54410 FvH4_6g54410
malus_domestica	MD09G1001500.v1.1 MD17G1005100.v1.1
prunus_persica	Prupe.3G314700_v2.0.a1 Prupe.3G314700_v2.0.a1
pyrus_communis	pycom17g00130
rosa_chinensis	RchiOBHm_Chr2g0176661
rosa_laevigata	RLG00000022433
rosa_multiflora	Rmu_co8314729.1_g000001 Rmu_co8416913.1_g000001 Rmu_sc0001417.1_g000018 Rmu_sc0012494.1_g000001 Rmu_ssc0000468.1_g000012
rosa_rugosa	Rorug02G0597400
rosa_samantha	Rh2AG674700 Rh2BG685800 Rh2CG649100 Rh2DG700000
rosa_wichuraiana	Rw0G015660 Rw2G055370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1097, 1955
Acc36I	ACCTGC	1 cut(s)	1863
Acc65I	GGTACC	2 cut(s)	250, 1600
AccB1I	GGYRCC	6 cut(s)	250, 662, 1600, 1726, 2103, 2122
AccIII	TCCGGA	1 cut(s)	1201
AciI	CCGC	4 cut(s)	337, 1895, 1949, 2056
AclWI	GGATC	4 cut(s)	1219, 2074, 2138, 2151
AcoI	YGGCCR	1 cut(s)	1762
AcuI	CTGAAG	2 cut(s)	888, 2273
AcyI	GRCGYC	1 cut(s)	26
AdeI	CACNNNGTG	2 cut(s)	1693, 2110
AfiI	CCNNNNNNNGG	8 cut(s)	118, 487, 616, 1448, 1586, 1610, 2185, 2314
AgsI	TTSAA	1 cut(s)	1256
AhlI	ACTAGT	1 cut(s)	484
AjnI	CCWGG	6 cut(s)	991, 1086, 1368, 1603, 2178, 2183
AjuI	GAANNNNNNNTTGG	4 cut(s)	195, 227, 2100, 2132
Alw21I	GWGCWC	1 cut(s)	534
Alw26I	GTCTC	3 cut(s)	803, 1555, 1619
AlwI	GGATC	4 cut(s)	1219, 2074, 2138, 2151
Ama87I	CYCGRG	2 cut(s)	1149, 1579
Aor13HI	TCCGGA	1 cut(s)	1201
AoxI	GGCC	7 cut(s)	637, 1043, 1576, 1762, 2049, 2181, 2305
ApaI	GGGCCC	1 cut(s)	2309
ApeKI	GCWGC	7 cut(s)	328, 374, 652, 971, 1373, 1424, 2037
AseI	ATTAAT	1 cut(s)	1209
Asp700I	GAANNNNTTC	1 cut(s)	1752
Asp718I	GGTACC	2 cut(s)	250, 1600
AspLEI	GCGC	3 cut(s)	319, 1333, 2320
AsuC2I	CCSGG	2 cut(s)	34, 1598
AsuHPI	GGTGA	4 cut(s)	85, 311, 614, 1731
AvaI	CYCGRG	2 cut(s)	1149, 1579
AvaII	GGWCC	6 cut(s)	130, 237, 407, 1366, 1456, 1852
AxyI	CCTNAGG	2 cut(s)	1443, 1743
BaeGI	GKGCMC	1 cut(s)	2309
BaeI	ACNNNNGTAYC	2 cut(s)	234, 267
BamHI	GGATCC	1 cut(s)	2143
BanI	GGYRCC	6 cut(s)	250, 662, 1600, 1726, 2103, 2122
BanII	GRGCYC	1 cut(s)	2309
BarI	GAAGNNNNNNTAC	2 cut(s)	1659, 1691
BauI	CACGAG	1 cut(s)	1960
Bbv12I	GWGCWC	1 cut(s)	534
BbvI	GCAGC	7 cut(s)	315, 386, 664, 958, 1360, 1436, 2049
BceAI	ACGGC	2 cut(s)	2110, 2297
BcgI	CGANNNNNNTGC	2 cut(s)	1951, 1985
BciT130I	CCWGG	6 cut(s)	993, 1088, 1370, 1605, 2180, 2185
BciVI	GTATCC	1 cut(s)	1209
BcnI	CCSGG	2 cut(s)	34, 1598
BcoDI	GTCTC	3 cut(s)	803, 1555, 1619
BcuI	ACTAGT	1 cut(s)	484
BfaI	CTAG	3 cut(s)	162, 485, 1995
BfmI	CTRYAG	2 cut(s)	2148, 2299
BfoI	RGCGCY	2 cut(s)	1334, 2321
BfuAI	ACCTGC	1 cut(s)	1863
BfuI	GTATCC	1 cut(s)	1209
BglII	AGATCT	2 cut(s)	883, 1191
BisI	GCNGC	8 cut(s)	329, 337, 375, 653, 972, 1374, 1425, 2038
BlsI	GCNGC	8 cut(s)	330, 338, 376, 654, 973, 1375, 1426, 2039
BmcAI	AGTACT	1 cut(s)	139
Bme1390I	CCNGG	8 cut(s)	34, 993, 1088, 1370, 1598, 1605, 2180, 2185
Bme18I	GGWCC	6 cut(s)	130, 237, 407, 1366, 1456, 1852
BmeT110I	CYCGRG	2 cut(s)	1149, 1579
BmrFI	CCNGG	8 cut(s)	34, 993, 1088, 1370, 1598, 1605, 2180, 2185
BmsI	GCATC	1 cut(s)	1079
BplI	GAGNNNNNCTC	1 cut(s)	28
BpmI	CTGGAG	2 cut(s)	67, 522
BpuEI	CTTGAG	2 cut(s)	245, 1897
BpuMI	CCSGG	2 cut(s)	34, 1598
Bsa29I	ATCGAT	2 cut(s)	716, 908
BsaHI	GRCGYC	1 cut(s)	26
BsaI	GGTCTC	1 cut(s)	1619
BsaJI	CCNNGG	7 cut(s)	112, 1135, 1585, 1604, 1730, 2184, 2313
BsaWI	WCCGGW	1 cut(s)	1201
BsaXI	ACNNNNNCTCC	4 cut(s)	513, 543, 1440, 1470
Bsc4I	CCNNNNNNNGG	8 cut(s)	118, 487, 616, 1448, 1586, 1610, 2185, 2314
Bse1I	ACTGG	3 cut(s)	252, 817, 865
Bse21I	CCTNAGG	2 cut(s)	1443, 1743
Bse3DI	GCAATG	1 cut(s)	1130
BseAI	TCCGGA	1 cut(s)	1201
BseBI	CCWGG	6 cut(s)	993, 1088, 1370, 1605, 2180, 2185
BseCI	ATCGAT	2 cut(s)	716, 908
BseDI	CCNNGG	7 cut(s)	112, 1135, 1585, 1604, 1730, 2184, 2313
BseGI	GGATG	8 cut(s)	988, 1457, 1824, 1840, 1881, 1950, 2028, 2361
BseLI	CCNNNNNNNGG	8 cut(s)	118, 487, 616, 1448, 1586, 1610, 2185, 2314
BseMI	GCAATG	1 cut(s)	1130
BseMII	CTCAG	4 cut(s)	189, 1457, 1638, 1734
BseNI	ACTGG	3 cut(s)	252, 817, 865
BseRI	GAGGAG	7 cut(s)	33, 36, 135, 398, 599, 2113, 2248
BseSI	GKGCMC	1 cut(s)	2309
BseXI	GCAGC	7 cut(s)	315, 386, 664, 958, 1360, 1436, 2049
BsgI	GTGCAG	1 cut(s)	1523
BshFI	GGCC	7 cut(s)	639, 1045, 1578, 1764, 2051, 2183, 2307
BshNI	GGYRCC	6 cut(s)	250, 662, 1600, 1726, 2103, 2122
BshVI	ATCGAT	2 cut(s)	716, 908
BsiHKAI	GWGCWC	1 cut(s)	534
BsiHKCI	CYCGRG	2 cut(s)	1149, 1579
BsiSI	CCGG	5 cut(s)	8, 34, 1202, 1597, 1765
BslFI	GGGAC	4 cut(s)	143, 322, 1442, 1856
BslI	CCNNNNNNNGG	8 cut(s)	118, 487, 616, 1448, 1586, 1610, 2185, 2314
BsmAI	GTCTC	3 cut(s)	803, 1555, 1619
BsmFI	GGGAC	4 cut(s)	143, 322, 1442, 1856
BsmI	GAATGC	2 cut(s)	1682, 2215
BsnI	GGCC	7 cut(s)	639, 1045, 1578, 1764, 2051, 2183, 2307
Bso31I	GGTCTC	1 cut(s)	1619
BsoBI	CYCGRG	2 cut(s)	1149, 1579
Bsp120I	GGGCCC	1 cut(s)	2305
Bsp1286I	GDGCHC	2 cut(s)	534, 2309
Bsp13I	TCCGGA	1 cut(s)	1201
Bsp1407I	TGTACA	1 cut(s)	735
Bsp143I	GATC	6 cut(s)	883, 1191, 1224, 1534, 2066, 2143
Bsp19I	CCATGG	1 cut(s)	1730
BspACI	CCGC	4 cut(s)	337, 1895, 1949, 2056
BspANI	GGCC	7 cut(s)	639, 1045, 1578, 1764, 2051, 2183, 2307
BspCNI	CTCAG	4 cut(s)	190, 1456, 1637, 1735
BspDI	ATCGAT	2 cut(s)	716, 908
BspEI	TCCGGA	1 cut(s)	1201
BspMAI	CTGCAG	2 cut(s)	2152, 2303
BspMI	ACCTGC	1 cut(s)	1863
BspPI	GGATC	4 cut(s)	1219, 2074, 2138, 2151
BspQI	GCTCTTC	2 cut(s)	436, 2154
BspT107I	GGYRCC	6 cut(s)	250, 662, 1600, 1726, 2103, 2122
BspTNI	GGTCTC	1 cut(s)	1619
BsrDI	GCAATG	1 cut(s)	1130
BsrGI	TGTACA	1 cut(s)	735
BsrI	ACTGG	3 cut(s)	252, 817, 865
BssECI	CCNNGG	7 cut(s)	112, 1135, 1585, 1604, 1730, 2184, 2313
BssMI	GATC	6 cut(s)	883, 1191, 1224, 1534, 2066, 2143
BssNI	GRCGYC	1 cut(s)	26
BssSI	CACGAG	1 cut(s)	1960
BssT1I	CCWWGG	3 cut(s)	112, 1135, 1730
Bst2BI	CACGAG	1 cut(s)	1960
Bst2UI	CCWGG	6 cut(s)	993, 1088, 1370, 1605, 2180, 2185
Bst4CI	ACNGT	4 cut(s)	407, 750, 1010, 1969
Bst6I	CTCTTC	4 cut(s)	54, 436, 579, 2154
BstACI	GRCGYC	1 cut(s)	26
BstAPI	GCANNNNNTGC	1 cut(s)	2198
BstAUI	TGTACA	1 cut(s)	735
BstC8I	GCNNGC	4 cut(s)	372, 530, 618, 1294
BstDEI	CTNAG	6 cut(s)	134, 198, 1443, 1624, 1743, 2288
BstDSI	CCRYGG	2 cut(s)	1730, 2313
BstENI	CCTNNNNNAGG	2 cut(s)	1446, 1608
BstF5I	GGATG	8 cut(s)	988, 1457, 1824, 1840, 1881, 1950, 2028, 2361
BstH2I	RGCGCY	2 cut(s)	1334, 2321
BstHHI	GCGC	3 cut(s)	319, 1333, 2320
BstKTI	GATC	6 cut(s)	886, 1194, 1227, 1537, 2069, 2146
BstMAI	GTCTC	3 cut(s)	803, 1555, 1619
BstMBI	GATC	6 cut(s)	883, 1191, 1224, 1534, 2066, 2143
BstMWI	GCNNNNNNNGC	6 cut(s)	325, 878, 1067, 1923, 2189, 2198
BstNI	CCWGG	6 cut(s)	993, 1088, 1370, 1605, 2180, 2185
BstNSI	RCATGY	1 cut(s)	624
BstSCI	CCNGG	8 cut(s)	32, 991, 1086, 1368, 1596, 1603, 2178, 2183
BstSFI	CTRYAG	2 cut(s)	2148, 2299
BstSLI	GKGCMC	1 cut(s)	2309
BstV1I	GCAGC	7 cut(s)	315, 386, 664, 958, 1360, 1436, 2049
BstX2I	RGATCY	3 cut(s)	883, 1191, 2143
BstXI	CCANNNNNNTGG	2 cut(s)	247, 812
BstYI	RGATCY	3 cut(s)	883, 1191, 2143
Bsu15I	ATCGAT	2 cut(s)	716, 908
Bsu36I	CCTNAGG	2 cut(s)	1443, 1743
BsuI	GTATCC	1 cut(s)	1209
BsuRI	GGCC	7 cut(s)	639, 1045, 1578, 1764, 2051, 2183, 2307
BsuTUI	ATCGAT	2 cut(s)	716, 908
BtgI	CCRYGG	2 cut(s)	1730, 2313
BtsCI	GGATG	8 cut(s)	988, 1457, 1824, 1840, 1881, 1950, 2028, 2361
BtsI	GCAGTG	1 cut(s)	897
BtsIMutI	CAGTG	4 cut(s)	245, 755, 897, 2076
BveI	ACCTGC	1 cut(s)	1863
Cac8I	GCNNGC	4 cut(s)	372, 530, 618, 1294
CfoI	GCGC	3 cut(s)	319, 1333, 2320
ClaI	ATCGAT	2 cut(s)	716, 908
CseI	GACGC	1 cut(s)	34
DdeI	CTNAG	6 cut(s)	134, 198, 1443, 1624, 1743, 2288
DpnI	GATC	6 cut(s)	885, 1193, 1226, 1536, 2068, 2145
DpnII	GATC	6 cut(s)	883, 1191, 1224, 1534, 2066, 2143
DraIII	CACNNNGTG	2 cut(s)	1693, 2110
EaeI	YGGCCR	1 cut(s)	1762
Eam1104I	CTCTTC	4 cut(s)	54, 436, 579, 2154
EarI	CTCTTC	4 cut(s)	54, 436, 579, 2154
Eco130I	CCWWGG	3 cut(s)	112, 1135, 1730
Eco24I	GRGCYC	1 cut(s)	2309
Eco31I	GGTCTC	1 cut(s)	1619
Eco32I	GATATC	1 cut(s)	714
Eco47I	GGWCC	6 cut(s)	130, 237, 407, 1366, 1456, 1852
Eco57I	CTGAAG	2 cut(s)	888, 2273
Eco81I	CCTNAGG	2 cut(s)	1443, 1743
Eco88I	CYCGRG	2 cut(s)	1149, 1579
EcoNI	CCTNNNNNAGG	2 cut(s)	1446, 1608
EcoO109I	RGGNCCY	5 cut(s)	130, 1456, 1852, 2305, 2306
EcoRII	CCWGG	6 cut(s)	991, 1086, 1368, 1603, 2178, 2183
EcoRV	GATATC	1 cut(s)	714
EcoT14I	CCWWGG	3 cut(s)	112, 1135, 1730
EcoT22I	ATGCAT	1 cut(s)	775
EcoT38I	GRGCYC	1 cut(s)	2309
ErhI	CCWWGG	3 cut(s)	112, 1135, 1730
FalI	AAGNNNNNCTT	2 cut(s)	254, 286
FaqI	GGGAC	4 cut(s)	143, 322, 1442, 1856
FauI	CCCGC	1 cut(s)	1888
FauNDI	CATATG	1 cut(s)	2221
Fnu4HI	GCNGC	8 cut(s)	329, 337, 375, 653, 972, 1374, 1425, 2038
FokI	GGATG	8 cut(s)	975, 1464, 1811, 1847, 1868, 1957, 2015, 2368
FriOI	GRGCYC	1 cut(s)	2309
Fsp4HI	GCNGC	8 cut(s)	329, 337, 375, 653, 972, 1374, 1425, 2038
FspBI	CTAG	3 cut(s)	162, 485, 1995
GlaI	GCGC	3 cut(s)	318, 1332, 2319
GluI	GCNGC	8 cut(s)	329, 337, 375, 653, 972, 1374, 1425, 2038
GsuI	CTGGAG	2 cut(s)	67, 522
HaeII	RGCGCY	2 cut(s)	1334, 2321
HaeIII	GGCC	7 cut(s)	639, 1045, 1578, 1764, 2051, 2183, 2307
HapII	CCGG	5 cut(s)	8, 34, 1202, 1597, 1765
HgaI	GACGC	1 cut(s)	34
HhaI	GCGC	3 cut(s)	319, 1333, 2320
Hin1I	GRCGYC	1 cut(s)	26
Hin6I	GCGC	3 cut(s)	317, 1331, 2318
HinP1I	GCGC	3 cut(s)	317, 1331, 2318
HindIII	AAGCTT	1 cut(s)	2258
HinfI	GANTC	8 cut(s)	11, 37, 76, 178, 844, 1019, 1152, 2024
HpaII	CCGG	5 cut(s)	8, 34, 1202, 1597, 1765
HphI	GGTGA	4 cut(s)	85, 311, 614, 1731
Hpy166II	GTNNAC	6 cut(s)	356, 605, 1165, 1414, 1514, 2000
Hpy188I	TCNGA	7 cut(s)	199, 1274, 1386, 1627, 1758, 2253, 2372
Hpy188III	TCNNGA	6 cut(s)	84, 235, 1202, 1256, 1315, 1885
Hpy8I	GTNNAC	6 cut(s)	356, 605, 1165, 1414, 1514, 2000
Hpy99I	CGWCG	1 cut(s)	28
HpyAV	CCTTC	4 cut(s)	296, 420, 1935, 2221
HpyCH4III	ACNGT	4 cut(s)	407, 750, 1010, 1969
HpyCH4IV	ACGT	1 cut(s)	267
HpyF10VI	GCNNNNNNNGC	6 cut(s)	325, 878, 1067, 1923, 2189, 2198
HpyF3I	CTNAG	6 cut(s)	134, 198, 1443, 1624, 1743, 2288
HpySE526I	ACGT	1 cut(s)	267
Hsp92I	GRCGYC	1 cut(s)	26
HspAI	GCGC	3 cut(s)	317, 1331, 2318
KflI	GGGWCCC	1 cut(s)	1456
Kpn2I	TCCGGA	1 cut(s)	1201
KpnI	GGTACC	2 cut(s)	254, 1604
Kzo9I	GATC	6 cut(s)	883, 1191, 1224, 1534, 2066, 2143
LguI	GCTCTTC	2 cut(s)	436, 2154
LmnI	GCTCC	3 cut(s)	4, 385, 1001
Lsp1109I	GCAGC	7 cut(s)	315, 386, 664, 958, 1360, 1436, 2049
LweI	GCATC	1 cut(s)	1079
MaeI	CTAG	3 cut(s)	162, 485, 1995
MaeII	ACGT	1 cut(s)	267
MaeIII	GTNAC	5 cut(s)	468, 570, 577, 1004, 1666
MalI	GATC	6 cut(s)	885, 1193, 1226, 1536, 2068, 2145
MboI	GATC	6 cut(s)	883, 1191, 1224, 1534, 2066, 2143
MfeI	CAATTG	1 cut(s)	1074
MflI	RGATCY	3 cut(s)	883, 1191, 2143
MhlI	GDGCHC	2 cut(s)	534, 2309
MluCI	AATT	7 cut(s)	18, 543, 590, 1074, 1206, 1210, 1907
MlyI	GAGTC	4 cut(s)	5, 1013, 1161, 2018
MmeI	TCCRAC	3 cut(s)	806, 1060, 1852
Mph1103I	ATGCAT	1 cut(s)	775
MroI	TCCGGA	1 cut(s)	1201
MroXI	GAANNNNTTC	1 cut(s)	1752
MseI	TTAA	9 cut(s)	227, 440, 593, 1209, 1268, 1434, 1556, 2174, 2322
MslI	CAYNNNNRTG	5 cut(s)	509, 1182, 1481, 1886, 2220
MspA1I	CMGCKG	1 cut(s)	377
MspI	CCGG	5 cut(s)	8, 34, 1202, 1597, 1765
MspR9I	CCNGG	8 cut(s)	34, 993, 1088, 1370, 1598, 1605, 2180, 2185
MunI	CAATTG	1 cut(s)	1074
Mva1269I	GAATGC	2 cut(s)	1682, 2215
MvaI	CCWGG	6 cut(s)	993, 1088, 1370, 1605, 2180, 2185
MwoI	GCNNNNNNNGC	6 cut(s)	325, 878, 1067, 1923, 2189, 2198
NciI	CCSGG	2 cut(s)	34, 1598
NcoI	CCATGG	1 cut(s)	1730
NdeI	CATATG	1 cut(s)	2221
NdeII	GATC	6 cut(s)	883, 1191, 1224, 1534, 2066, 2143
NsiI	ATGCAT	1 cut(s)	775
NspI	RCATGY	1 cut(s)	624
PciSI	GCTCTTC	2 cut(s)	436, 2154
PctI	GAATGC	2 cut(s)	1682, 2215
PdmI	GAANNNNTTC	1 cut(s)	1752
PfeI	GAWTC	4 cut(s)	37, 76, 178, 844
PfoI	TCCNGGA	1 cut(s)	32
PkrI	GCNGC	8 cut(s)	330, 338, 376, 654, 973, 1375, 1426, 2039
PleI	GAGTC	4 cut(s)	5, 1013, 1160, 2018
PpsI	GAGTC	4 cut(s)	5, 1013, 1160, 2018
PpuMI	RGGWCCY	3 cut(s)	130, 1456, 1852
PshBI	ATTAAT	1 cut(s)	1209
PsiI	TTATAA	2 cut(s)	1097, 1955
Psp5II	RGGWCCY	3 cut(s)	130, 1456, 1852
Psp6I	CCWGG	6 cut(s)	991, 1086, 1368, 1603, 2178, 2183
PspGI	CCWGG	6 cut(s)	991, 1086, 1368, 1603, 2178, 2183
PspOMI	GGGCCC	1 cut(s)	2305
PspPPI	RGGWCCY	3 cut(s)	130, 1456, 1852
PsrI	GAACNNNNNNTAC	2 cut(s)	1704, 1736
PstI	CTGCAG	2 cut(s)	2152, 2303
PsuI	RGATCY	3 cut(s)	883, 1191, 2143
PvuII	CAGCTG	1 cut(s)	377
RseI	CAYNNNNRTG	5 cut(s)	509, 1182, 1481, 1886, 2220
SapI	GCTCTTC	2 cut(s)	436, 2154
SaqAI	TTAA	9 cut(s)	227, 440, 593, 1209, 1268, 1434, 1556, 2174, 2322
SatI	GCNGC	8 cut(s)	329, 337, 375, 653, 972, 1374, 1425, 2038
Sau3AI	GATC	6 cut(s)	883, 1191, 1224, 1534, 2066, 2143
ScaI	AGTACT	1 cut(s)	139
SchI	GAGTC	4 cut(s)	5, 1013, 1161, 2018
ScrFI	CCNGG	8 cut(s)	34, 993, 1088, 1370, 1598, 1605, 2180, 2185
SduI	GDGCHC	2 cut(s)	534, 2309
SfaNI	GCATC	1 cut(s)	1079
SfcI	CTRYAG	2 cut(s)	2148, 2299
SinI	GGWCC	6 cut(s)	130, 237, 407, 1366, 1456, 1852
SmiMI	CAYNNNNRTG	5 cut(s)	509, 1182, 1481, 1886, 2220
SmlI	CTYRAG	2 cut(s)	260, 1912
SmoI	CTYRAG	2 cut(s)	260, 1912
SpeI	ACTAGT	1 cut(s)	484
Sse9I	AATT	7 cut(s)	18, 543, 590, 1074, 1206, 1210, 1907
SsiI	CCGC	4 cut(s)	337, 1895, 1949, 2056
SspI	AATATT	1 cut(s)	1653
SspMI	CTAG	3 cut(s)	162, 485, 1995
StyD4I	CCNGG	8 cut(s)	32, 991, 1086, 1368, 1596, 1603, 2178, 2183
StyI	CCWWGG	3 cut(s)	112, 1135, 1730
TaaI	ACNGT	4 cut(s)	407, 750, 1010, 1969
TaiI	ACGT	1 cut(s)	270
TaqI	TCGA	4 cut(s)	23, 716, 908, 2346
TasI	AATT	7 cut(s)	18, 543, 590, 1074, 1206, 1210, 1907
TatI	WGTACW	4 cut(s)	137, 735, 952, 1413
TauI	GCSGC	1 cut(s)	339
TfiI	GAWTC	4 cut(s)	37, 76, 178, 844
Tru1I	TTAA	9 cut(s)	227, 440, 593, 1209, 1268, 1434, 1556, 2174, 2322
Tru9I	TTAA	9 cut(s)	227, 440, 593, 1209, 1268, 1434, 1556, 2174, 2322
TscAI	CASTG	4 cut(s)	252, 755, 904, 2076
TseI	GCWGC	7 cut(s)	328, 374, 652, 971, 1373, 1424, 2037
TspDTI	ATGAA	7 cut(s)	57, 402, 758, 1390, 1465, 1870, 2208
TspGWI	ACGGA	2 cut(s)	487, 1531
TspRI	CASTG	4 cut(s)	252, 755, 904, 2076
VpaK11BI	GGWCC	6 cut(s)	130, 237, 407, 1366, 1456, 1852
VspI	ATTAAT	1 cut(s)	1209
XagI	CCTNNNNNAGG	2 cut(s)	1446, 1608
XceI	RCATGY	1 cut(s)	624
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1835
XmnI	GAANNNNTTC	1 cut(s)	1752
XspI	CTAG	3 cut(s)	162, 485, 1995
ZrmI	AGTACT	1 cut(s)	139
Zsp2I	ATGCAT	1 cut(s)	775

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.