Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0014526

Physical Location & Seq

Genomic Coordinates Reverse (-)

2687638 .. 2690764

Gene Structure 3127 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G056100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGTGTTTCCACTTCACTCGGCTTCACGGGTCCTGTTTCTCTTTTATTTTTCAACCGAAGGGTAATTTGTCCCAAACAAACTTCCTCTCCCAACTTCTTCACTTTTATATTCTGCTCCACTATTGGCATTGGTTCTTTCCTTGTCCTAAGCTGCACCATAATCCAAAGTTACAAAACATGCCTGTCCTTACCTCTTCTTCTTCTTCCTCTTTTACATACATTTCTTTGTCCATTTTCTTGCTGCTCATTCTGTACAACACCACTGTCATTTGTTCAGCTACAACCAGGACCAAGACGACTCACCCAAACCGCCAACTCTCTGTTAATTACTATGCCAAATCATGTCCTCAAGTTGAGCAGCTCATCGGCTCCATCACATCCCAACAGTTCAAAGAATCACCTGTTTCCGGCCCGGCAACCATTCGCCTTTTCTTCCATGACTGCTTTGTTGAAGGTTGTGATGCATCGATAATCATAAGCTCAAAGCAGCAGGGGAACAAAATGTTGGCAGAGAAGGATGCACCTGATAACAAGGACCTGAGAGAAGAAGGCTTTGAAAGTGTGAGGAAGGCCAAAGCTGTTGTGGAGAGCAAGTGTCCTGGTGTTGTGTCTTGTGCAGACATACTTGCAATTTCAGCCAGAGATTATGTCCACTTGGCAGGGGGTCCATACTATCAAGTTAAGAAAGGGAGGTGGGATGGGAAAATATCAATGGCCTCAAAAGTGGCCTCAAATATTCCCCAAGCAAATTTCACAGTGGATCAGCTACTCAAACTCTTCAGTTCAAAAGGCCTAACACTTGAAGACCTGGTTGTTCTTTCTGGTGCACATACCTTCGGCTTTGCTCATTGCCAGAACTTTGTAAGCAGGCTCTATGACTACAGGGGATCCAAGCAGCCCGACCCGGTTATCGACCCGAGACTCCTGAGGGCCCTAAGAATGTCATGCCCACATTATGGTGGAAATGCTGACATCGTTGCACCATTTGATGTCACCACACCGTTTGTGTTTGACCATGCCTATTATGGGAACCTAGAGGCTAAGTTGGGCTTGCTAGCATCAGACCAAGCTTTATCTTTGGACCCAAGAACCAAGCCTATTGTCCAGGCGTTGGCAAAAGATAAGCAAAAGTTCTTTCAAGCTTTTGCTGCAGCAATGGAGAAAATGGGCTCAATAGGTGTGAAAAGAGGAAGAAAACATGGGGAGAAAAGGAAAGACTGTAGTACGCATATGTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009636 GO:0009664 GO:0009987 GO:0016043 GO:0016209 GO:0016491 GO:0016684 GO:0030054 GO:0030312 GO:0042221 GO:0044464 GO:0045229 GO:0050896 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944 GO:0097237 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

413

Amino Acids

46.07

Weight (kDa)

9.23

Isoelectric Point (pI)

41.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014526)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34060
fragaria_vesca	FvH4_2g10460 FvH4_2g10460
malus_domestica	MD05G1306500.v1.1
prunus_persica	Prupe.4G056100_v2.0.a1
pyrus_communis	pycom05g28360
rosa_chinensis	RchiOBHm_Chr5g0009831
rosa_laevigata	RLG00000031704
rosa_multiflora	Rmu_sc0021291.1_g000001
rosa_roxburghii	Rroxscaffold_1G00066360
rosa_rugosa	Rorug04G0446300 Rorug04G0446300
rosa_samantha	Rh5AG077700 Rh5BG072800 Rh5CG085200 Rh5DG073300
rosa_wichuraiana	Rw5G007160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	956, 1111
AciI	CCGC	1 cut(s)	310
AclWI	GGATC	3 cut(s)	768, 882, 895
AcsI	RAATTY	1 cut(s)	748
AcuI	CTGAAG	1 cut(s)	763
AfaI	GTAC	2 cut(s)	254, 1225
AfiI	CCNNNNNNNGG	4 cut(s)	407, 956, 1026, 1111
AgsI	TTSAA	7 cut(s)	53, 391, 452, 557, 786, 803, 1139
AjnI	CCWGG	4 cut(s)	284, 598, 807, 1104
AjuI	GAANNNNNNNTTGG	2 cut(s)	488, 520
AluBI	AGCT	8 cut(s)	151, 278, 361, 480, 578, 766, 1070, 1142
AluI	AGCT	8 cut(s)	151, 278, 361, 480, 578, 766, 1070, 1142
Alw21I	GWGCWC	1 cut(s)	829
Alw26I	GTCTC	1 cut(s)	913
Alw44I	GTGCAC	1 cut(s)	825
AlwI	GGATC	3 cut(s)	768, 882, 895
Ama87I	CYCGRG	1 cut(s)	916
AoxI	GGCC	6 cut(s)	409, 570, 714, 726, 790, 930
ApaI	GGGCCC	1 cut(s)	934
ApaLI	GTGCAC	1 cut(s)	825
ApeKI	GCWGC	7 cut(s)	151, 241, 358, 487, 895, 1148, 1151
ApoI	RAATTY	1 cut(s)	748
AspS9I	GGNCC	8 cut(s)	30, 288, 410, 535, 665, 930, 931, 1081
AsuC2I	CCSGG	2 cut(s)	413, 905
AsuHPI	GGTGA	3 cut(s)	293, 390, 985
AsuNHI	GCTAGC	1 cut(s)	1054
AvaI	CYCGRG	1 cut(s)	916
AvaII	GGWCC	5 cut(s)	30, 288, 535, 665, 1081
AxyI	CCTNAGG	1 cut(s)	926
BaeGI	GKGCMC	2 cut(s)	829, 934
BamHI	GGATCC	1 cut(s)	887
BanII	GRGCYC	2 cut(s)	934, 1172
BbsI	GAAGAC	1 cut(s)	810
Bbv12I	GWGCWC	1 cut(s)	829
BbvI	GCAGC	7 cut(s)	138, 228, 370, 499, 907, 1135, 1163
BccI	CCATC	2 cut(s)	380, 692
BciT130I	CCWGG	4 cut(s)	286, 600, 809, 1106
BcnI	CCSGG	2 cut(s)	413, 905
BcoDI	GTCTC	1 cut(s)	913
BfaI	CTAG	2 cut(s)	1034, 1055
BfmI	CTRYAG	3 cut(s)	880, 1149, 1219
BisI	GCNGC	7 cut(s)	152, 242, 359, 488, 896, 1149, 1152
BlsI	GCNGC	7 cut(s)	153, 243, 360, 489, 897, 1150, 1153
Bme1390I	CCNGG	6 cut(s)	286, 413, 600, 809, 905, 1106
Bme18I	GGWCC	5 cut(s)	30, 288, 535, 665, 1081
BmeT110I	CYCGRG	1 cut(s)	916
BmgT120I	GGNCC	8 cut(s)	30, 288, 410, 535, 665, 930, 931, 1081
BmiI	GGNNCC	7 cut(s)	31, 370, 666, 889, 932, 1031, 1083
BmrFI	CCNGG	6 cut(s)	286, 413, 600, 809, 905, 1106
BmsI	GCATC	4 cut(s)	451, 473, 508, 1067
BmtI	GCTAGC	1 cut(s)	1058
BpiI	GAAGAC	1 cut(s)	810
Bpu10I	CCTNAGC	1 cut(s)	147
BpuEI	CTTGAG	1 cut(s)	333
BpuMI	CCSGG	2 cut(s)	413, 905
Bsa29I	ATCGAT	1 cut(s)	467
BsaXI	ACNNNNNCTCC	4 cut(s)	71, 101, 578, 608
Bsc4I	CCNNNNNNNGG	4 cut(s)	407, 956, 1026, 1111
Bse21I	CCTNAGG	1 cut(s)	926
Bse3DI	GCAATG	2 cut(s)	847, 1161
BseBI	CCWGG	4 cut(s)	286, 600, 809, 1106
BseCI	ATCGAT	1 cut(s)	467
BseGI	GGATG	3 cut(s)	377, 523, 703
BseLI	CCNNNNNNNGG	4 cut(s)	407, 956, 1026, 1111
BseMI	GCAATG	2 cut(s)	847, 1161
BseMII	CTCAG	2 cut(s)	530, 917
BseSI	GKGCMC	2 cut(s)	829, 934
BseXI	GCAGC	7 cut(s)	138, 228, 370, 499, 907, 1135, 1163
BsgI	GTGCAG	2 cut(s)	137, 636
BshFI	GGCC	6 cut(s)	411, 572, 716, 728, 792, 932
BshVI	ATCGAT	1 cut(s)	467
BsiHKAI	GWGCWC	1 cut(s)	829
BsiHKCI	CYCGRG	1 cut(s)	916
BsiSI	CCGG	3 cut(s)	408, 413, 905
BslFI	GGGAC	1 cut(s)	55
BslI	CCNNNNNNNGG	4 cut(s)	407, 956, 1026, 1111
BsmAI	GTCTC	1 cut(s)	913
BsmFI	GGGAC	1 cut(s)	55
BsnI	GGCC	6 cut(s)	411, 572, 716, 728, 792, 932
BsoBI	CYCGRG	1 cut(s)	916
Bsp120I	GGGCCC	1 cut(s)	930
Bsp1286I	GDGCHC	3 cut(s)	829, 934, 1172
Bsp1407I	TGTACA	1 cut(s)	252
Bsp143I	GATC	2 cut(s)	760, 887
BspACI	CCGC	1 cut(s)	310
BspANI	GGCC	6 cut(s)	411, 572, 716, 728, 792, 932
BspCNI	CTCAG	2 cut(s)	531, 918
BspDI	ATCGAT	1 cut(s)	467
BspLI	GGNNCC	7 cut(s)	31, 370, 666, 889, 932, 1031, 1083
BspMAI	CTGCAG	1 cut(s)	1153
BspOI	GCTAGC	1 cut(s)	1058
BspPI	GGATC	3 cut(s)	768, 882, 895
BsrDI	GCAATG	2 cut(s)	847, 1161
BsrGI	TGTACA	1 cut(s)	252
BssMI	GATC	2 cut(s)	760, 887
Bst2UI	CCWGG	4 cut(s)	286, 600, 809, 1106
Bst4CI	ACNGT	5 cut(s)	265, 387, 757, 1002, 1220
Bst6I	CTCTTC	2 cut(s)	199, 782
BstAUI	TGTACA	1 cut(s)	252
BstC8I	GCNNGC	3 cut(s)	869, 1052, 1056
BstDEI	CTNAG	5 cut(s)	147, 539, 926, 935, 1041
BstF5I	GGATG	3 cut(s)	377, 523, 703
BstKTI	GATC	2 cut(s)	763, 890
BstMAI	GTCTC	1 cut(s)	913
BstMBI	GATC	2 cut(s)	760, 887
BstMWI	GCNNNNNNNGC	2 cut(s)	635, 1148
BstNI	CCWGG	4 cut(s)	286, 600, 809, 1106
BstNSI	RCATGY	1 cut(s)	181
BstSCI	CCNGG	6 cut(s)	284, 411, 598, 807, 903, 1104
BstSFI	CTRYAG	3 cut(s)	880, 1149, 1219
BstSLI	GKGCMC	2 cut(s)	829, 934
BstV1I	GCAGC	7 cut(s)	138, 228, 370, 499, 907, 1135, 1163
BstV2I	GAAGAC	1 cut(s)	810
BstX2I	RGATCY	1 cut(s)	887
BstYI	RGATCY	1 cut(s)	887
Bsu15I	ATCGAT	1 cut(s)	467
Bsu36I	CCTNAGG	1 cut(s)	926
BsuRI	GGCC	6 cut(s)	411, 572, 716, 728, 792, 932
BsuTUI	ATCGAT	1 cut(s)	467
BtsCI	GGATG	3 cut(s)	377, 523, 703
BtsIMutI	CAGTG	2 cut(s)	261, 762
Cac8I	GCNNGC	3 cut(s)	869, 1052, 1056
Cfr13I	GGNCC	8 cut(s)	30, 288, 410, 535, 665, 930, 931, 1081
ClaI	ATCGAT	1 cut(s)	467
CsiI	ACCWGGT	1 cut(s)	807
Csp6I	GTAC	2 cut(s)	253, 1224
CspCI	CAANNNNNGTGG	2 cut(s)	985, 1020
CviAII	CATG	6 cut(s)	178, 342, 437, 945, 1016, 1199
CviQI	GTAC	2 cut(s)	253, 1224
DdeI	CTNAG	5 cut(s)	147, 539, 926, 935, 1041
DpnI	GATC	2 cut(s)	762, 889
DpnII	GATC	2 cut(s)	760, 887
Eam1104I	CTCTTC	2 cut(s)	199, 782
EarI	CTCTTC	2 cut(s)	199, 782
Eco147I	AGGCCT	1 cut(s)	792
Eco24I	GRGCYC	2 cut(s)	934, 1172
Eco47I	GGWCC	5 cut(s)	30, 288, 535, 665, 1081
Eco57I	CTGAAG	1 cut(s)	763
Eco81I	CCTNAGG	1 cut(s)	926
Eco88I	CYCGRG	1 cut(s)	916
EcoO109I	RGGNCCY	4 cut(s)	30, 535, 930, 931
EcoRII	CCWGG	4 cut(s)	284, 598, 807, 1104
EcoT22I	ATGCAT	1 cut(s)	466
EcoT38I	GRGCYC	2 cut(s)	934, 1172
FaeI	CATG	6 cut(s)	181, 345, 440, 948, 1019, 1202
FalI	AAGNNNNNCTT	2 cut(s)	1034, 1066
FaqI	GGGAC	1 cut(s)	55
FatI	CATG	6 cut(s)	177, 341, 436, 944, 1015, 1198
FauNDI	CATATG	1 cut(s)	1230
Fnu4HI	GCNGC	7 cut(s)	152, 242, 359, 488, 896, 1149, 1152
FokI	GGATG	3 cut(s)	364, 530, 710
FriOI	GRGCYC	2 cut(s)	934, 1172
Fsp4HI	GCNGC	7 cut(s)	152, 242, 359, 488, 896, 1149, 1152
FspBI	CTAG	2 cut(s)	1034, 1055
GluI	GCNGC	7 cut(s)	152, 242, 359, 488, 896, 1149, 1152
HaeIII	GGCC	6 cut(s)	411, 572, 716, 728, 792, 932
HapII	CCGG	3 cut(s)	408, 413, 905
Hin1II	CATG	6 cut(s)	181, 345, 440, 948, 1019, 1202
HindIII	AAGCTT	2 cut(s)	1068, 1140
HinfI	GANTC	3 cut(s)	298, 395, 921
HpaII	CCGG	3 cut(s)	408, 413, 905
HphI	GGTGA	3 cut(s)	293, 390, 985
Hpy166II	GTNNAC	2 cut(s)	652, 827
Hpy188I	TCNGA	1 cut(s)	1063
Hpy188III	TCNNGA	1 cut(s)	925
Hpy8I	GTNNAC	2 cut(s)	652, 827
HpyAV	CCTTC	6 cut(s)	52, 446, 508, 542, 562, 844
HpyCH4III	ACNGT	5 cut(s)	265, 387, 757, 1002, 1220
HpyCH4V	TGCA	8 cut(s)	154, 464, 521, 617, 629, 827, 980, 1151
HpyF10VI	GCNNNNNNNGC	2 cut(s)	635, 1148
HpyF3I	CTNAG	5 cut(s)	147, 539, 926, 935, 1041
Hsp92II	CATG	6 cut(s)	181, 345, 440, 948, 1019, 1202
Kzo9I	GATC	2 cut(s)	760, 887
LmnI	GCTCC	2 cut(s)	120, 374
Lsp1109I	GCAGC	7 cut(s)	138, 228, 370, 499, 907, 1135, 1163
LweI	GCATC	4 cut(s)	451, 473, 508, 1067
MabI	ACCWGGT	1 cut(s)	807
MaeI	CTAG	2 cut(s)	1034, 1055
MaeIII	GTNAC	2 cut(s)	168, 991
MalI	GATC	2 cut(s)	762, 889
MboI	GATC	2 cut(s)	760, 887
MflI	RGATCY	1 cut(s)	887
MhlI	GDGCHC	3 cut(s)	829, 934, 1172
MluCI	AATT	4 cut(s)	64, 325, 630, 748
MlyI	GAGTC	2 cut(s)	292, 915
Mph1103I	ATGCAT	1 cut(s)	466
MseI	TTAA	2 cut(s)	324, 681
MslI	CAYNNNNRTG	1 cut(s)	957
MspI	CCGG	3 cut(s)	408, 413, 905
MspR9I	CCNGG	6 cut(s)	286, 413, 600, 809, 905, 1106
MvaI	CCWGG	4 cut(s)	286, 600, 809, 1106
MwoI	GCNNNNNNNGC	2 cut(s)	635, 1148
NciI	CCSGG	2 cut(s)	413, 905
NdeI	CATATG	1 cut(s)	1230
NdeII	GATC	2 cut(s)	760, 887
NheI	GCTAGC	1 cut(s)	1054
NlaIII	CATG	6 cut(s)	181, 345, 440, 948, 1019, 1202
NlaIV	GGNNCC	7 cut(s)	31, 370, 666, 889, 932, 1031, 1083
NmuCI	GTSAC	1 cut(s)	991
NsiI	ATGCAT	1 cut(s)	466
NspI	RCATGY	1 cut(s)	181
PceI	AGGCCT	1 cut(s)	792
PfeI	GAWTC	1 cut(s)	395
PflMI	CCANNNNNTGG	2 cut(s)	956, 1111
PkrI	GCNGC	7 cut(s)	153, 243, 360, 489, 897, 1150, 1153
PleI	GAGTC	2 cut(s)	292, 915
PpsI	GAGTC	2 cut(s)	292, 915
PpuMI	RGGWCCY	2 cut(s)	30, 535
Psp5II	RGGWCCY	2 cut(s)	30, 535
Psp6I	CCWGG	4 cut(s)	284, 598, 807, 1104
PspGI	CCWGG	4 cut(s)	284, 598, 807, 1104
PspN4I	GGNNCC	7 cut(s)	31, 370, 666, 889, 932, 1031, 1083
PspOMI	GGGCCC	1 cut(s)	930
PspPI	GGNCC	8 cut(s)	30, 288, 410, 535, 665, 930, 931, 1081
PspPPI	RGGWCCY	2 cut(s)	30, 535
PstI	CTGCAG	1 cut(s)	1153
PsuI	RGATCY	1 cut(s)	887
RsaI	GTAC	2 cut(s)	254, 1225
RsaNI	GTAC	2 cut(s)	253, 1224
RseI	CAYNNNNRTG	1 cut(s)	957
SaqAI	TTAA	2 cut(s)	324, 681
SatI	GCNGC	7 cut(s)	152, 242, 359, 488, 896, 1149, 1152
Sau3AI	GATC	2 cut(s)	760, 887
Sau96I	GGNCC	8 cut(s)	30, 288, 410, 535, 665, 930, 931, 1081
SchI	GAGTC	2 cut(s)	292, 915
ScrFI	CCNGG	6 cut(s)	286, 413, 600, 809, 905, 1106
SduI	GDGCHC	3 cut(s)	829, 934, 1172
SexAI	ACCWGGT	1 cut(s)	807
SfaNI	GCATC	4 cut(s)	451, 473, 508, 1067
SfcI	CTRYAG	3 cut(s)	880, 1149, 1219
SinI	GGWCC	5 cut(s)	30, 288, 535, 665, 1081
SmiMI	CAYNNNNRTG	1 cut(s)	957
SmlI	CTYRAG	1 cut(s)	348
SmoI	CTYRAG	1 cut(s)	348
Sse9I	AATT	4 cut(s)	64, 325, 630, 748
SseBI	AGGCCT	1 cut(s)	792
SsiI	CCGC	1 cut(s)	310
SspI	AATATT	1 cut(s)	736
SspMI	CTAG	2 cut(s)	1034, 1055
StuI	AGGCCT	1 cut(s)	792
StyD4I	CCNGG	6 cut(s)	284, 411, 598, 807, 903, 1104
TaaI	ACNGT	5 cut(s)	265, 387, 757, 1002, 1220
TaqI	TCGA	2 cut(s)	467, 912
TasI	AATT	4 cut(s)	64, 325, 630, 748
TatI	WGTACW	1 cut(s)	252
TfiI	GAWTC	1 cut(s)	395
Tru1I	TTAA	2 cut(s)	324, 681
Tru9I	TTAA	2 cut(s)	324, 681
TscAI	CASTG	2 cut(s)	268, 762
TseFI	GTSAC	1 cut(s)	991
TseI	GCWGC	7 cut(s)	151, 241, 358, 487, 895, 1148, 1151
Tsp45I	GTSAC	1 cut(s)	991
TspRI	CASTG	2 cut(s)	268, 762
Van91I	CCANNNNNTGG	2 cut(s)	956, 1111
VneI	GTGCAC	1 cut(s)	825
VpaK11BI	GGWCC	5 cut(s)	30, 288, 535, 665, 1081
XapI	RAATTY	1 cut(s)	748
XceI	RCATGY	1 cut(s)	181
XcmI	CCANNNNNNNNNTGG	2 cut(s)	580, 1022
XspI	CTAG	2 cut(s)	1034, 1055
Zsp2I	ATGCAT	1 cut(s)	466

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.