Prupe.4G123400_v2.0.a1

Membrane-bound transcription factor site-2

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
6711013 .. 6715443
4431 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G123400.3

Sequence Viewer

Length: 1614 bp
ATGGAGGGTAGGCGAGTGAGAATGTTCAATATGGGAAGAGCAAGAGGACAACACCCACAAACTCAGACCCATCACAGTCTTCTACCCATTCACTCCCATTCAAACCCATCATCTCCTTCTCGTCTTTCAACCACCATCTCTTGTTGCTACTGCGATTTCAAGTTCTGGGCTTTCAACCAACCCCTCTTCCATTTCGGGAGAAGCCACTCCCAAATTCTCAGGGCATGGTTCTCCATTGGGGTCGGCTTTGGTCTAACCCTGCTCTTCTCCATTTCTCTCATCCTTATCTGGGAACTCGGCAGAGCTCTCAATCTCTTCCATGGAAGCTTCTTCATTAACTTGTTCTCTAGATTTTCCTCCTCCTTCAGCACCTCAATCGCCGACGTTGCCTGTATCTTCATTGCCACAATGGTTTCAGTTTCTGTTCATGAACTGGGTCATGCTCTCGCTGCTGCAAGTGAGTGCGTGCAAATGGAGTATGTTGCCGTGTTTGTTGCGTTTCTGTTTCCTGGTGCGCTGGTAGCTTTCGATTCTGAGTCTCTGCAACCATTGTCTTGTTTTGCTGCTCTTCGGATTTATTGTGCTGGAATTTGGCACAACGCAGTGTGCTGTGCAGTTTGTGGGCTGGCATTACTTCTCCTGCCCTTCATCTTGTTTCCATTCTACATACATGGTGAAAGTCCCATGGTTTTGGGTGTACCATCTACGTCGCCTTTGTCCGGTTACTTGTCTCCTGGCGATGTAATTGTGTCAGTTGATGGTGTGCCCATCCATAATGTCCAGGAATGGATGGAGATGACAGCTCTGATAAATGAATTGGCACTTAGAGGTAGAAACCATTCCCTAGATGTCCAAGGCTTTGGAATCAATAGAATAAAGGGGTACTGTGTGCCTAACTCTATGATGGAGGAAAGTAAGCAGATTGTTATAGGAGATAACCAGTCTTCTTGTCCTGATGATCTTACTGCATTTACACCTCTTCCCTGTGATCATACAAGCATATTAGATCATAATCATCCAAGCAGAATTGAGAAAACCCACTGCTTGAATGCGAAGAATGTTGTCAAGCTTAATAAATGTGGTGAAGGATGGGCGGCAATAACCAATGGCAGCAACTGCATATGTTCACAGGAGGAGTCCTGCTTAAGTCCAGTTCAAATTCCAGGCTTAATATGGGTTGAGATCACCTATTCAAGGCCCTATTATCTGGAATGCTTGCGAGTTAGAAGAAAATCTTTTGTGGGTCCAAGAATTTCTGATTCCATGGAATCTAACTGCGGTGGGACTTTTGTCTTTGTTGGTGATGTTATCTCCATGGCACGCTCAGTTAAGTTAACTGCATATCAACCTCGCTGGGCATTTCCATTGGGTACATATCTTCCAAATGTACTAGAAAGGATTTTGATATGCACATTCCAAGTCTCTCTAACACTAGCTCTTCTCAACAGTTTGCCGGTGTACTTTCTGGATGGAGAATCAATTTTAGAGGCGACTCTTTCCCACTTCGCTTTGCTGTGCCCAAGGAAGAGAAGGAAAGTTCTTCAAGTTTGCCTTTTATGGGGGACACTCATTTCCATCCTCGCCTTCTTCAGGATCATGTTACATACTTTGTAA

Protein Analysis

538

Amino Acids

59.65

Weight (kDa)

7.78

Isoelectric Point (pI)

50.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 1094, 1278
AclWI GGATC 1 cut(s) 1601
AcsI RAATTY 4 cut(s) 213, 588, 1158, 1251
AcuI CTGAAG 2 cut(s) 349, 1573
AfaI GTAC 5 cut(s) 699, 884, 1372, 1389, 1460
AfiI CCNNNNNNNGG 5 cut(s) 289, 719, 1194, 1558, 1590
AflII CTTAAG 1 cut(s) 1144
AgsI TTSAA 9 cut(s) 28, 102, 129, 160, 175, 1048, 1157, 1194, 1544
AjnI CCWGG 4 cut(s) 508, 733, 780, 1162
AluBI AGCT 6 cut(s) 305, 327, 524, 803, 1069, 1436
AluI AGCT 6 cut(s) 305, 327, 524, 803, 1069, 1436
Alw21I GWGCWC 1 cut(s) 307
Alw26I GTCTC 3 cut(s) 543, 735, 1426
AlwI GGATC 1 cut(s) 1601
AlwNI CAGNNNCTG 2 cut(s) 422, 1116
AoxI GGCC 1 cut(s) 1196
ApeKI GCWGC 4 cut(s) 449, 452, 563, 1110
ApoI RAATTY 4 cut(s) 213, 588, 1158, 1251
Asp700I GAANNNNTTC 1 cut(s) 838
AspLEI GCGC 1 cut(s) 517
AspS9I GGNCC 2 cut(s) 1197, 1244
AsuHPI GGTGA 4 cut(s) 686, 1094, 1177, 1313
AvaII GGWCC 1 cut(s) 1244
BaeGI GKGCMC 2 cut(s) 768, 1520
BanII GRGCYC 1 cut(s) 307
BbsI GAAGAC 2 cut(s) 71, 936
Bbv12I GWGCWC 1 cut(s) 307
BbvI GCAGC 4 cut(s) 436, 439, 550, 1122
BceAI ACGGC 1 cut(s) 470
BcgI CGANNNNNNTGC 2 cut(s) 358, 392
BciT130I CCWGG 4 cut(s) 510, 735, 782, 1164
BclI TGATCA 1 cut(s) 988
BcoDI GTCTC 3 cut(s) 543, 735, 1426
BfaI CTAG 4 cut(s) 348, 845, 1391, 1433
BfrI CTTAAG 1 cut(s) 1144
BisI GCNGC 5 cut(s) 450, 453, 564, 1095, 1111
BlsI GCNGC 5 cut(s) 451, 454, 565, 1096, 1112
Bme1390I CCNGG 4 cut(s) 510, 735, 782, 1164
Bme18I GGWCC 1 cut(s) 1244
BmgT120I GGNCC 2 cut(s) 1197, 1244
BmiI GGNNCC 1 cut(s) 1245
BmrFI CCNGG 4 cut(s) 510, 735, 782, 1164
BmrI ACTGGG 1 cut(s) 443
BmuI ACTGGG 1 cut(s) 443
BoxI GACNNNNGTC 1 cut(s) 1289
BpiI GAAGAC 2 cut(s) 71, 936
BsaBI GATNNNNATC 1 cut(s) 1011
BsaJI CCNNGG 6 cut(s) 319, 684, 853, 1263, 1314, 1520
BsaWI WCCGGW 1 cut(s) 719
Bsc4I CCNNNNNNNGG 5 cut(s) 289, 719, 1194, 1558, 1590
Bse118I RCCGGY 1 cut(s) 1453
Bse1I ACTGG 3 cut(s) 438, 940, 1151
Bse3DI GCAATG 1 cut(s) 399
Bse8I GATNNNNATC 1 cut(s) 1011
BseBI CCWGG 4 cut(s) 510, 735, 782, 1164
BseDI CCNNGG 6 cut(s) 319, 684, 853, 1263, 1314, 1520
BseGI GGATG 7 cut(s) 279, 768, 795, 1015, 1094, 1474, 1575
BseJI GATNNNNATC 1 cut(s) 1011
BseLI CCNNNNNNNGG 5 cut(s) 289, 719, 1194, 1558, 1590
BseMI GCAATG 1 cut(s) 399
BseMII CTCAG 4 cut(s) 77, 232, 525, 1338
BseNI ACTGG 3 cut(s) 438, 940, 1151
BseRI GAGGAG 2 cut(s) 349, 1148
BseSI GKGCMC 2 cut(s) 768, 1520
BseXI GCAGC 4 cut(s) 436, 439, 550, 1122
BseYI CCCAGC 1 cut(s) 1353
BsgI GTGCAG 1 cut(s) 633
BshFI GGCC 1 cut(s) 1198
BsiHKAI GWGCWC 1 cut(s) 307
BsiSI CCGG 2 cut(s) 720, 1454
BslFI GGGAC 3 cut(s) 666, 1297, 1576
BslI CCNNNNNNNGG 5 cut(s) 289, 719, 1194, 1558, 1590
BsmAI GTCTC 3 cut(s) 543, 735, 1426
BsmFI GGGAC 3 cut(s) 666, 1297, 1576
BsmI GAATGC 2 cut(s) 1054, 1217
BsnI GGCC 1 cut(s) 1198
Bsp1286I GDGCHC 3 cut(s) 307, 768, 1520
Bsp143I GATC 5 cut(s) 958, 988, 1006, 1182, 1593
Bsp19I CCATGG 4 cut(s) 319, 684, 1263, 1314
BspACI CCGC 2 cut(s) 1094, 1278
BspANI GGCC 1 cut(s) 1198
BspCNI CTCAG 4 cut(s) 76, 231, 526, 1337
BspHI TCATGA 1 cut(s) 427
BspLI GGNNCC 1 cut(s) 1245
BspPI GGATC 1 cut(s) 1601
BspQI GCTCTTC 4 cut(s) 31, 269, 573, 1443
BspTI CTTAAG 1 cut(s) 1144
BsrDI GCAATG 1 cut(s) 399
BsrFI RCCGGY 1 cut(s) 1453
BsrI ACTGG 3 cut(s) 438, 940, 1151
BssAI RCCGGY 1 cut(s) 1453
BssECI CCNNGG 6 cut(s) 319, 684, 853, 1263, 1314, 1520
BssMI GATC 5 cut(s) 958, 988, 1006, 1182, 1593
BssT1I CCWWGG 6 cut(s) 319, 684, 853, 1263, 1314, 1520
Bst2UI CCWGG 4 cut(s) 510, 735, 782, 1164
Bst4CI ACNGT 3 cut(s) 77, 887, 1448
Bst6I CTCTTC 8 cut(s) 31, 191, 269, 320, 573, 984, 1443, 1520
BstAFI CTTAAG 1 cut(s) 1144
BstAPI GCANNNNNTGC 1 cut(s) 1116
BstC8I GCNNGC 4 cut(s) 467, 627, 1217, 1321
BstDEI CTNAG 5 cut(s) 63, 218, 534, 824, 1324
BstDSI CCRYGG 4 cut(s) 319, 684, 1263, 1314
BstENI CCTNNNNNAGG 2 cut(s) 1192, 1588
BstF5I GGATG 7 cut(s) 279, 768, 795, 1015, 1094, 1474, 1575
BstHHI GCGC 1 cut(s) 517
BstKTI GATC 5 cut(s) 961, 991, 1009, 1185, 1596
BstMAI GTCTC 3 cut(s) 543, 735, 1426
BstMBI GATC 5 cut(s) 958, 988, 1006, 1182, 1593
BstMWI GCNNNNNNNGC 4 cut(s) 386, 449, 521, 1116
BstNI CCWGG 4 cut(s) 510, 735, 782, 1164
BstPAI GACNNNNGTC 1 cut(s) 1289
BstSCI CCNGG 4 cut(s) 508, 733, 780, 1162
BstSLI GKGCMC 2 cut(s) 768, 1520
BstV1I GCAGC 4 cut(s) 436, 439, 550, 1122
BstV2I GAAGAC 2 cut(s) 71, 936
BstXI CCANNNNNNTGG 2 cut(s) 691, 860
BsuRI GGCC 1 cut(s) 1198
BtgI CCRYGG 4 cut(s) 319, 684, 1263, 1314
BtgZI GCGATG 1 cut(s) 753
BtsCI GGATG 7 cut(s) 279, 768, 795, 1015, 1094, 1474, 1575
BtsI GCAGTG 2 cut(s) 609, 1039
BtsIMutI CAGTG 2 cut(s) 609, 1039
Cac8I GCNNGC 4 cut(s) 467, 627, 1217, 1321
CaiI CAGNNNCTG 2 cut(s) 422, 1116
CciI TCATGA 1 cut(s) 427
CfoI GCGC 1 cut(s) 517
Cfr10I RCCGGY 1 cut(s) 1453
Cfr13I GGNCC 2 cut(s) 1197, 1244
Csp6I GTAC 5 cut(s) 698, 883, 1371, 1388, 1459
CviAII CATG 9 cut(s) 225, 320, 428, 440, 671, 685, 1264, 1315, 1597
CviQI GTAC 5 cut(s) 698, 883, 1371, 1388, 1459
DdeI CTNAG 5 cut(s) 63, 218, 534, 824, 1324
DpnI GATC 5 cut(s) 960, 990, 1008, 1184, 1595
DpnII GATC 5 cut(s) 958, 988, 1006, 1182, 1593
Eam1104I CTCTTC 8 cut(s) 31, 191, 269, 320, 573, 984, 1443, 1520
EarI CTCTTC 8 cut(s) 31, 191, 269, 320, 573, 984, 1443, 1520
Ecl136II GAGCTC 1 cut(s) 305
Eco130I CCWWGG 6 cut(s) 319, 684, 853, 1263, 1314, 1520
Eco24I GRGCYC 1 cut(s) 307
Eco47I GGWCC 1 cut(s) 1244
Eco53kI GAGCTC 1 cut(s) 305
Eco57I CTGAAG 2 cut(s) 349, 1573
EcoICRI GAGCTC 1 cut(s) 305
EcoNI CCTNNNNNAGG 2 cut(s) 1192, 1588
EcoO109I RGGNCCY 1 cut(s) 1197
EcoRII CCWGG 4 cut(s) 508, 733, 780, 1162
EcoT14I CCWWGG 6 cut(s) 319, 684, 853, 1263, 1314, 1520
EcoT38I GRGCYC 1 cut(s) 307
ErhI CCWWGG 6 cut(s) 319, 684, 853, 1263, 1314, 1520
FaeI CATG 9 cut(s) 228, 323, 431, 443, 674, 688, 1267, 1318, 1600
FalI AAGNNNNNCTT 4 cut(s) 1219, 1251, 1536, 1568
FaqI GGGAC 3 cut(s) 666, 1297, 1576
FatI CATG 9 cut(s) 224, 319, 427, 439, 670, 684, 1263, 1314, 1596
FauNDI CATATG 1 cut(s) 1121
FbaI TGATCA 1 cut(s) 988
Fnu4HI GCNGC 5 cut(s) 450, 453, 564, 1095, 1111
FokI GGATG 7 cut(s) 266, 755, 802, 1002, 1101, 1481, 1562
FriOI GRGCYC 1 cut(s) 307
Fsp4HI GCNGC 5 cut(s) 450, 453, 564, 1095, 1111
FspBI CTAG 4 cut(s) 348, 845, 1391, 1433
GlaI GCGC 1 cut(s) 516
GluI GCNGC 5 cut(s) 450, 453, 564, 1095, 1111
GsaI CCCAGC 1 cut(s) 1357
HaeIII GGCC 1 cut(s) 1198
HapII CCGG 2 cut(s) 720, 1454
HhaI GCGC 1 cut(s) 517
Hin1II CATG 9 cut(s) 228, 323, 431, 443, 674, 688, 1267, 1318, 1600
Hin6I GCGC 1 cut(s) 515
HinP1I GCGC 1 cut(s) 515
HincII GTYRAC 1 cut(s) 1335
HindII GTYRAC 1 cut(s) 1335
HindIII AAGCTT 2 cut(s) 325, 1067
HinfI GANTC 8 cut(s) 530, 536, 864, 1136, 1259, 1268, 1475, 1492
HpaI GTTAAC 1 cut(s) 1335
HpaII CCGG 2 cut(s) 720, 1454
HphI GGTGA 4 cut(s) 686, 1094, 1177, 1313
Hpy166II GTNNAC 4 cut(s) 698, 1127, 1335, 1459
Hpy188I TCNGA 5 cut(s) 66, 535, 573, 807, 1258
Hpy188III TCNNGA 7 cut(s) 196, 348, 428, 953, 1208, 1466, 1591
Hpy8I GTNNAC 4 cut(s) 698, 1127, 1335, 1459
Hpy99I CGWCG 2 cut(s) 386, 712
HpyAV CCTTC 6 cut(s) 126, 373, 655, 1079, 1524, 1594
HpyCH4III ACNGT 3 cut(s) 77, 887, 1448
HpyCH4IV ACGT 2 cut(s) 384, 707
HpyCH4V TGCA 8 cut(s) 455, 469, 544, 614, 968, 1119, 1340, 1410
HpyF10VI GCNNNNNNNGC 4 cut(s) 386, 449, 521, 1116
HpyF3I CTNAG 5 cut(s) 63, 218, 534, 824, 1324
HpySE526I ACGT 2 cut(s) 384, 707
Hsp92II CATG 9 cut(s) 228, 323, 431, 443, 674, 688, 1267, 1318, 1600
HspAI GCGC 1 cut(s) 515
Ksp22I TGATCA 1 cut(s) 988
KspAI GTTAAC 1 cut(s) 1335
Kzo9I GATC 5 cut(s) 958, 988, 1006, 1182, 1593
LguI GCTCTTC 4 cut(s) 31, 269, 573, 1443
Lsp1109I GCAGC 4 cut(s) 436, 439, 550, 1122
MaeI CTAG 4 cut(s) 348, 845, 1391, 1433
MaeII ACGT 2 cut(s) 384, 707
MaeIII GTNAC 2 cut(s) 722, 1599
MalI GATC 5 cut(s) 960, 990, 1008, 1184, 1595
MboI GATC 5 cut(s) 958, 988, 1006, 1182, 1593
MhlI GDGCHC 3 cut(s) 307, 768, 1520
MluCI AATT 8 cut(s) 213, 588, 744, 815, 1026, 1158, 1251, 1479
MlyI GAGTC 3 cut(s) 545, 1145, 1486
MroXI GAANNNNTTC 1 cut(s) 838
MseI TTAA 6 cut(s) 336, 1071, 1145, 1169, 1329, 1334
MspCI CTTAAG 1 cut(s) 1144
MspI CCGG 2 cut(s) 720, 1454
MspR9I CCNGG 4 cut(s) 510, 735, 782, 1164
Mva1269I GAATGC 2 cut(s) 1054, 1217
MvaI CCWGG 4 cut(s) 510, 735, 782, 1164
MwoI GCNNNNNNNGC 4 cut(s) 386, 449, 521, 1116
NcoI CCATGG 4 cut(s) 319, 684, 1263, 1314
NdeI CATATG 1 cut(s) 1121
NdeII GATC 5 cut(s) 958, 988, 1006, 1182, 1593
NlaIII CATG 9 cut(s) 228, 323, 431, 443, 674, 688, 1267, 1318, 1600
NlaIV GGNNCC 1 cut(s) 1245
NmeAIII GCCGAG 1 cut(s) 276
PagI TCATGA 1 cut(s) 427
PciSI GCTCTTC 4 cut(s) 31, 269, 573, 1443
PctI GAATGC 2 cut(s) 1054, 1217
PdmI GAANNNNTTC 1 cut(s) 838
PfeI GAWTC 5 cut(s) 530, 864, 1259, 1268, 1475
PfoI TCCNGGA 1 cut(s) 780
PkrI GCNGC 5 cut(s) 451, 454, 565, 1096, 1112
PleI GAGTC 3 cut(s) 544, 1144, 1486
PpsI GAGTC 3 cut(s) 544, 1144, 1486
PshAI GACNNNNGTC 1 cut(s) 1289
Psp124BI GAGCTC 1 cut(s) 307
Psp6I CCWGG 4 cut(s) 508, 733, 780, 1162
PspFI CCCAGC 1 cut(s) 1353
PspGI CCWGG 4 cut(s) 508, 733, 780, 1162
PspN4I GGNNCC 1 cut(s) 1245
PspPI GGNCC 2 cut(s) 1197, 1244
PstNI CAGNNNCTG 2 cut(s) 422, 1116
RsaI GTAC 5 cut(s) 699, 884, 1372, 1389, 1460
RsaNI GTAC 5 cut(s) 698, 883, 1371, 1388, 1459
SacI GAGCTC 1 cut(s) 307
SapI GCTCTTC 4 cut(s) 31, 269, 573, 1443
SaqAI TTAA 6 cut(s) 336, 1071, 1145, 1169, 1329, 1334
SatI GCNGC 5 cut(s) 450, 453, 564, 1095, 1111
Sau3AI GATC 5 cut(s) 958, 988, 1006, 1182, 1593
Sau96I GGNCC 2 cut(s) 1197, 1244
SchI GAGTC 3 cut(s) 545, 1145, 1486
ScrFI CCNGG 4 cut(s) 510, 735, 782, 1164
SduI GDGCHC 3 cut(s) 307, 768, 1520
SinI GGWCC 1 cut(s) 1244
SmlI CTYRAG 1 cut(s) 1144
SmoI CTYRAG 1 cut(s) 1144
Sse9I AATT 8 cut(s) 213, 588, 744, 815, 1026, 1158, 1251, 1479
SsiI CCGC 2 cut(s) 1094, 1278
SspMI CTAG 4 cut(s) 348, 845, 1391, 1433
SstI GAGCTC 1 cut(s) 307
StyD4I CCNGG 4 cut(s) 508, 733, 780, 1162
StyI CCWWGG 6 cut(s) 319, 684, 853, 1263, 1314, 1520
TaaI ACNGT 3 cut(s) 77, 887, 1448
TaiI ACGT 2 cut(s) 387, 710
TaqI TCGA 1 cut(s) 528
TasI AATT 8 cut(s) 213, 588, 744, 815, 1026, 1158, 1251, 1479
TatI WGTACW 2 cut(s) 1387, 1458
TauI GCSGC 1 cut(s) 1097
TfiI GAWTC 5 cut(s) 530, 864, 1259, 1268, 1475
Tru1I TTAA 6 cut(s) 336, 1071, 1145, 1169, 1329, 1334
Tru9I TTAA 6 cut(s) 336, 1071, 1145, 1169, 1329, 1334
TscAI CASTG 2 cut(s) 609, 1046
TseI GCWGC 4 cut(s) 449, 452, 563, 1110
TspDTI ATGAA 6 cut(s) 322, 388, 416, 444, 637, 828
TspRI CASTG 2 cut(s) 609, 1046
Vha464I CTTAAG 1 cut(s) 1144
VpaK11BI GGWCC 1 cut(s) 1244
XagI CCTNNNNNAGG 2 cut(s) 1192, 1588
XapI RAATTY 4 cut(s) 213, 588, 1158, 1251
XbaI TCTAGA 1 cut(s) 347
XcmI CCANNNNNNNNNTGG 1 cut(s) 1170
XmnI GAANNNNTTC 1 cut(s) 838
XspI CTAG 4 cut(s) 348, 845, 1391, 1433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.