Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0001897

Physical Location & Seq

Genomic Coordinates Forward (+)

17447376 .. 17450192

Gene Structure 2817 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032662

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGGAAGGAAGACGATTCAGAAGGTTCGGGATGCCAAGACGAAACCCACAAACCCACTCTCCCAGTCTCCTCCCTACTCACTCCCACACTCCCTCCACCTCCACCATATCCTGCTGCTACTGCGACTACAGATTCTGGGCCTTCAACGACCCTCTTTTCCATTTGGGCCGAAACCACTCCCTCCCTCTCAAAGCATGGTTCTCCGTCGGCGTCGGCTTCGGCCTCAGCGCCCTCCTCGCCGTCTCCCTCCTCCTCATCTTTGAACTGGGCCGTGCTCTCACTCTCTTCCCTAACCACCTCTTCTTGGATACCTTGCTCTCATCAATCTCCTCGGCCCCACTGAACGACGCCGTCTATGTAGTGGTTGCGACCCTCGTTTCGGTTTCGGTGCACGAGTTTGGGCATGCGCTTGCTGCTGCCAGTGAGGGGATACGTATGGAGTATGTGGCTGTGTTTGTTGCGTGTCTGTTTCCTGGGGCTCTGGTCGCTTTTAATGATGATGTAATGCAAGCATTGCCTTGTTTTACCGCGCTTCGAGTATATTGTGCTGGGATTTGGCACAATGCAGTGTGCTGTGCGGTTTGCGGGTTGGCATTGCTACTCCTGCCGGTGTTGTTGTTTCCGTTTTACATACACGGTGAAAGCCCCATGGTGTTGGGTGTACCTTCTACGTCGCCTTTGTCTGGTTACTTGTCTCGTGGTGATGTGATTGTATCGGTGGATGGTGTACCCATCCGTAATGCGCAAGAATGGATGGATATGGCGGCTTCCTTGAATGAATTGTCACTTAATGATGGAAACCACAACATGGATGTCCAAAGCGTTGGGACAGTCAGTAACAGAAAGGGGTACTGTGTTCCTAATCCTATGATGGAAGAAAGCAAACAGATGCTTATAGTAGATAATCAGTCTTCATGTCCTGACGGTCTTACGTCATTTACAACTGTTCCCTGCGCTTATACAAGCATCAATATTGAGAAAACCTACTGCTTGAATGCTAAGGATGTAGTCAAGCTTAATAAATGTGGTGATGGATGGCCGCCAACCATAACCAACGGCAGCAACTGCATGTGTTCACAGGACAAGTCCTGCTTAAGTCCAATTCAAATCCCCGGCTTAATATGGGTTGAGGTCACTTATTCAAGGCCCTATTCTCTGGAATGCTTGCGAGTTAGAAGAAAATCTTTTGCGGACTCAAGAAATTCTGATTCAATGGAATCTAACTGTGGCGGGACTTTTGTTTTTGTTGGTAACGTTATCTCCATGGCACGCTCAATCCAGTTAACTGCATATCGACCTCGTTGGGCATTTCCTTTGGGTACATACCTTCCAAATGTACTTGAAAGGATTTTGAGATGCACATTCCAGGTCTCTCTTACACTAGCTCTTCTCAACAGTTTGCCGGTATACTTACTGGATGGTGAATCAATTCTAGAGGCAAGTCTTCTACACTTCACGCCAAAGATGACAGACGAGCTGCAAGATGATGCTCTACTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006355 GO:0006357 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009628 GO:0009651 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0012505 GO:0016020 GO:0016787 GO:0019219 GO:0019222 GO:0019538 GO:0023051 GO:0031090 GO:0031293 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031984 GO:0033554 GO:0033619 GO:0034976 GO:0036003 GO:0042538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043618 GO:0043620 GO:0044093 GO:0044238 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051090 GO:0051091 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0065009 GO:0070011 GO:0071214 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0098588 GO:0098791 GO:0104004 GO:0140096 GO:1900457 GO:1901564 GO:1902680 GO:1903506 GO:1903508 GO:1905897 GO:1990440 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Peptidase_M50

Protein Analysis

500

Amino Acids

54.83

Weight (kDa)

6.06

Isoelectric Point (pI)

47.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M50	PF02163	120 - 483	3.1e-17	Peptidase family M50

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001897)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20310 AT4G20310 AT4G20310 AT4G20310 AT4G20310 AT4G20310 AT4G20310 AT4G20310 AT4G20310
fragaria_vesca	FvH4_3g13520 FvH4_3g13520 FvH4_3g13520 FvH4_3g13520 FvH4_3g13520 FvH4_3g13520
malus_domestica	MD10G1221200.v1.1
prunus_persica	Prupe.4G123400_v2.0.a1 Prupe.4G123400_v2.0.a1 Prupe.4G123400_v2.0.a1 Prupe.4G123400_v2.0.a1 Prupe.4G123400_v2.0.a1 Prupe.4G123400_v2.0.a1 Prupe.4G123400_v2.0.a1 Prupe.4G123400_v2.0.a1 Prupe.4G123400_v2.0.a1 Prupe.4G123400_v2.0.a1 Prupe.4G123400_v2.0.a1 Prupe.4G123400_v2.0.a1 Prupe.4G123400_v2.0.a1 Prupe.4G123400_v2.0.a1
pyrus_communis	pycom10g18680
rosa_chinensis	RchiOBHm_Chr5g0022471
rosa_laevigata	RLG00000032662
rosa_multiflora	Rmu_sc0000178.1_g000016 Rmu_sc0005639.1_g000003
rosa_roxburghii	Rroxscaffold_1G00056580
rosa_rugosa	Rorug05G0073900 Rorug05G0073900 Rorug05G0073900 Rorug05G0074000 Rorug05G0074000
rosa_samantha	Rh5AG160800 Rh5BG159800 Rh5CG174100 Rh5DG160400
rosa_wichuraiana	Rw5G014340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	744
AccB7I	CCANNNNNTGG	1 cut(s)	808
AccI	GTMKAC	1 cut(s)	1407
AccII	CGCG	1 cut(s)	530
AciI	CCGC	7 cut(s)	528, 578, 585, 764, 1040, 1190, 1230
AclI	AACGTT	1 cut(s)	1254
AcoI	YGGCCR	1 cut(s)	1037
AcsI	RAATTY	1 cut(s)	1201
AcyI	GRCGYC	2 cut(s)	210, 348
AfaI	GTAC	5 cut(s)	663, 729, 851, 1321, 1338
AfiI	CCNNNNNNNGG	5 cut(s)	304, 379, 426, 683, 808
AflII	CTTAAG	1 cut(s)	1093
AgsI	TTSAA	8 cut(s)	145, 263, 775, 994, 1106, 1143, 1212, 1343
AjnI	CCWGG	2 cut(s)	472, 1365
AluBI	AGCT	3 cut(s)	1015, 1385, 1477
AluI	AGCT	3 cut(s)	1015, 1385, 1477
Alw21I	GWGCWC	2 cut(s)	277, 393
Alw26I	GTCTC	4 cut(s)	71, 247, 699, 1375
Alw44I	GTGCAC	1 cut(s)	389
AlwNI	CAGNNNCTG	2 cut(s)	135, 1065
AoxI	GGCC	7 cut(s)	138, 166, 220, 268, 333, 1037, 1145
ApaLI	GTGCAC	1 cut(s)	389
ApeKI	GCWGC	5 cut(s)	114, 413, 416, 1059, 1477
ApoI	RAATTY	1 cut(s)	1201
ArsI	GACNNNNNNTTYG	2 cut(s)	361, 393
Asp700I	GAANNNNTTC	1 cut(s)	1428
AspLEI	GCGC	5 cut(s)	230, 409, 532, 745, 956
AspS9I	GGNCC	5 cut(s)	138, 166, 268, 334, 1146
AsuC2I	CCSGG	1 cut(s)	1113
AsuHPI	GGTGA	4 cut(s)	650, 713, 1040, 1433
BaeGI	GKGCMC	1 cut(s)	393
BanII	GRGCYC	1 cut(s)	481
BauI	CACGAG	2 cut(s)	392, 696
BbsI	GAAGAC	3 cut(s)	16, 903, 1436
Bbv12I	GWGCWC	2 cut(s)	277, 393
BbvCI	CCTCAGC	1 cut(s)	224
BbvI	GCAGC	5 cut(s)	101, 400, 403, 1071, 1464
BccI	CCATC	8 cut(s)	716, 740, 748, 788, 865, 1025, 1029, 1412
BceAI	ACGGC	4 cut(s)	224, 255, 335, 1072
BciT130I	CCWGG	2 cut(s)	474, 1367
BciVI	GTATCC	2 cut(s)	301, 423
BcnI	CCSGG	1 cut(s)	1113
BcoDI	GTCTC	4 cut(s)	71, 247, 699, 1375
BfaI	CTAG	2 cut(s)	1382, 1433
BfmI	CTRYAG	1 cut(s)	127
BfoI	RGCGCY	1 cut(s)	231
BfrI	CTTAAG	1 cut(s)	1093
BfuI	GTATCC	2 cut(s)	301, 423
BisI	GCNGC	7 cut(s)	115, 414, 417, 765, 1040, 1060, 1478
BlsI	GCNGC	7 cut(s)	116, 415, 418, 766, 1041, 1061, 1479
Bme1390I	CCNGG	3 cut(s)	474, 1113, 1367
BmgT120I	GGNCC	5 cut(s)	138, 166, 268, 334, 1146
BmiI	GGNNCC	1 cut(s)	336
BmrFI	CCNGG	3 cut(s)	474, 1113, 1367
BmrI	ACTGGG	2 cut(s)	57, 275
BmsI	GCATC	5 cut(s)	21, 879, 975, 1346, 1477
BmuI	ACTGGG	2 cut(s)	57, 275
BpiI	GAAGAC	3 cut(s)	16, 903, 1436
Bpu10I	CCTNAGC	2 cut(s)	224, 999
BpuEI	CTTGAG	1 cut(s)	1180
BpuMI	CCSGG	1 cut(s)	1113
BsaAI	YACGTR	1 cut(s)	434
BsaHI	GRCGYC	2 cut(s)	210, 348
BsaI	GGTCTC	1 cut(s)	1375
BsaJI	CCNNGG	5 cut(s)	330, 473, 648, 1111, 1263
BsaXI	ACNNNNNCTCC	6 cut(s)	43, 73, 77, 107, 1244, 1274
Bsc4I	CCNNNNNNNGG	5 cut(s)	304, 379, 426, 683, 808
Bse118I	RCCGGY	2 cut(s)	607, 1402
Bse1I	ACTGG	5 cut(s)	63, 270, 420, 1279, 1419
Bse3DI	GCAATG	2 cut(s)	512, 593
BseBI	CCWGG	2 cut(s)	474, 1367
BseDI	CCNNGG	5 cut(s)	330, 473, 648, 1111, 1263
BseGI	GGATG	8 cut(s)	36, 727, 732, 759, 817, 1009, 1040, 1423
BseLI	CCNNNNNNNGG	5 cut(s)	304, 379, 426, 683, 808
BseMI	GCAATG	2 cut(s)	512, 593
BseMII	CTCAG	1 cut(s)	238
BseNI	ACTGG	5 cut(s)	63, 270, 420, 1279, 1419
BseRI	GAGGAG	5 cut(s)	59, 224, 239, 242, 319
BseSI	GKGCMC	1 cut(s)	393
BseXI	GCAGC	5 cut(s)	101, 400, 403, 1071, 1464
BseYI	CCCAGC	1 cut(s)	548
Bsh1236I	CGCG	1 cut(s)	530
BshFI	GGCC	7 cut(s)	140, 168, 222, 270, 335, 1039, 1147
BsiHKAI	GWGCWC	2 cut(s)	277, 393
BsiSI	CCGG	3 cut(s)	608, 1113, 1403
BslFI	GGGAC	2 cut(s)	841, 1246
BslI	CCNNNNNNNGG	5 cut(s)	304, 379, 426, 683, 808
BsmAI	GTCTC	4 cut(s)	71, 247, 699, 1375
BsmBI	CGTCTC	1 cut(s)	247
BsmFI	GGGAC	2 cut(s)	841, 1246
BsmI	GAATGC	2 cut(s)	1000, 1166
BsnI	GGCC	7 cut(s)	140, 168, 222, 270, 335, 1039, 1147
Bso31I	GGTCTC	1 cut(s)	1375
Bsp1286I	GDGCHC	3 cut(s)	277, 393, 481
Bsp19I	CCATGG	2 cut(s)	648, 1263
BspACI	CCGC	7 cut(s)	528, 578, 585, 764, 1040, 1190, 1230
BspANI	GGCC	7 cut(s)	140, 168, 222, 270, 335, 1039, 1147
BspCNI	CTCAG	1 cut(s)	237
BspFNI	CGCG	1 cut(s)	530
BspLI	GGNNCC	1 cut(s)	336
BspQI	GCTCTTC	1 cut(s)	1392
BspTI	CTTAAG	1 cut(s)	1093
BspTNI	GGTCTC	1 cut(s)	1375
BsrDI	GCAATG	2 cut(s)	512, 593
BsrFI	RCCGGY	2 cut(s)	607, 1402
BsrI	ACTGG	5 cut(s)	63, 270, 420, 1279, 1419
BssAI	RCCGGY	2 cut(s)	607, 1402
BssECI	CCNNGG	5 cut(s)	330, 473, 648, 1111, 1263
BssNAI	GTATAC	1 cut(s)	1408
BssNI	GRCGYC	2 cut(s)	210, 348
BssSI	CACGAG	2 cut(s)	392, 696
BssT1I	CCWWGG	2 cut(s)	648, 1263
Bst1107I	GTATAC	1 cut(s)	1408
Bst2BI	CACGAG	2 cut(s)	392, 696
Bst2UI	CCWGG	2 cut(s)	474, 1367
Bst4CI	ACNGT	7 cut(s)	638, 832, 854, 926, 946, 1226, 1397
Bst6I	CTCTTC	3 cut(s)	290, 305, 1392
BstACI	GRCGYC	2 cut(s)	210, 348
BstAFI	CTTAAG	1 cut(s)	1093
BstAPI	GCANNNNNTGC	2 cut(s)	514, 1065
BstBAI	YACGTR	1 cut(s)	434
BstC8I	GCNNGC	5 cut(s)	405, 411, 510, 1166, 1270
BstDEI	CTNAG	2 cut(s)	224, 999
BstDSI	CCRYGG	2 cut(s)	648, 1263
BstF5I	GGATG	8 cut(s)	36, 727, 732, 759, 817, 1009, 1040, 1423
BstFNI	CGCG	1 cut(s)	530
BstH2I	RGCGCY	1 cut(s)	231
BstHHI	GCGC	5 cut(s)	230, 409, 532, 745, 956
BstMAI	GTCTC	4 cut(s)	71, 247, 699, 1375
BstMWI	GCNNNNNNNGC	7 cut(s)	120, 236, 413, 485, 514, 604, 1065
BstNI	CCWGG	2 cut(s)	474, 1367
BstNSI	RCATGY	2 cut(s)	407, 1072
BstSCI	CCNGG	3 cut(s)	472, 1111, 1365
BstSFI	CTRYAG	1 cut(s)	127
BstSLI	GKGCMC	1 cut(s)	393
BstSNI	TACGTA	1 cut(s)	434
BstUI	CGCG	1 cut(s)	530
BstV1I	GCAGC	5 cut(s)	101, 400, 403, 1071, 1464
BstV2I	GAAGAC	3 cut(s)	16, 903, 1436
BstXI	CCANNNNNNTGG	2 cut(s)	655, 824
BstZ17I	GTATAC	1 cut(s)	1408
BsuI	GTATCC	2 cut(s)	301, 423
BsuRI	GGCC	7 cut(s)	140, 168, 222, 270, 335, 1039, 1147
BtgI	CCRYGG	2 cut(s)	648, 1263
BtsCI	GGATG	8 cut(s)	36, 727, 732, 759, 817, 1009, 1040, 1423
BtsI	GCAGTG	1 cut(s)	573
BtsIMutI	CAGTG	3 cut(s)	338, 427, 573
Cac8I	GCNNGC	5 cut(s)	405, 411, 510, 1166, 1270
CaiI	CAGNNNCTG	2 cut(s)	135, 1065
CfoI	GCGC	5 cut(s)	230, 409, 532, 745, 956
Cfr10I	RCCGGY	2 cut(s)	607, 1402
Cfr13I	GGNCC	5 cut(s)	138, 166, 268, 334, 1146
CseI	GACGC	2 cut(s)	199, 356
Csp6I	GTAC	5 cut(s)	662, 728, 850, 1320, 1337
CviAII	CATG	7 cut(s)	195, 404, 649, 808, 915, 1069, 1264
CviQI	GTAC	5 cut(s)	662, 728, 850, 1320, 1337
DdeI	CTNAG	2 cut(s)	224, 999
EaeI	YGGCCR	1 cut(s)	1037
Eam1104I	CTCTTC	3 cut(s)	290, 305, 1392
EarI	CTCTTC	3 cut(s)	290, 305, 1392
Eco105I	TACGTA	1 cut(s)	434
Eco130I	CCWWGG	2 cut(s)	648, 1263
Eco24I	GRGCYC	1 cut(s)	481
Eco31I	GGTCTC	1 cut(s)	1375
EcoO109I	RGGNCCY	1 cut(s)	1146
EcoRII	CCWGG	2 cut(s)	472, 1365
EcoT14I	CCWWGG	2 cut(s)	648, 1263
EcoT38I	GRGCYC	1 cut(s)	481
ErhI	CCWWGG	2 cut(s)	648, 1263
Esp3I	CGTCTC	1 cut(s)	247
FaeI	CATG	7 cut(s)	198, 407, 652, 811, 918, 1072, 1267
FalI	AAGNNNNNCTT	4 cut(s)	1076, 1108, 1168, 1200
FaqI	GGGAC	2 cut(s)	841, 1246
FatI	CATG	7 cut(s)	194, 403, 648, 807, 914, 1068, 1263
FauI	CCCGC	2 cut(s)	578, 1223
FblI	GTMKAC	1 cut(s)	1407
Fnu4HI	GCNGC	7 cut(s)	115, 414, 417, 765, 1040, 1060, 1478
FokI	GGATG	8 cut(s)	43, 719, 734, 766, 824, 1016, 1047, 1430
FriOI	GRGCYC	1 cut(s)	481
Fsp4HI	GCNGC	7 cut(s)	115, 414, 417, 765, 1040, 1060, 1478
FspBI	CTAG	2 cut(s)	1382, 1433
FspI	TGCGCA	1 cut(s)	744
GlaI	GCGC	5 cut(s)	229, 408, 531, 744, 955
GluI	GCNGC	7 cut(s)	115, 414, 417, 765, 1040, 1060, 1478
GsaI	CCCAGC	1 cut(s)	552
HaeII	RGCGCY	1 cut(s)	231
HaeIII	GGCC	7 cut(s)	140, 168, 222, 270, 335, 1039, 1147
HapII	CCGG	3 cut(s)	608, 1113, 1403
HgaI	GACGC	2 cut(s)	199, 356
HhaI	GCGC	5 cut(s)	230, 409, 532, 745, 956
Hin1I	GRCGYC	2 cut(s)	210, 348
Hin1II	CATG	7 cut(s)	198, 407, 652, 811, 918, 1072, 1267
Hin6I	GCGC	5 cut(s)	228, 407, 530, 743, 954
HinP1I	GCGC	5 cut(s)	228, 407, 530, 743, 954
HincII	GTYRAC	1 cut(s)	1284
HindII	GTYRAC	1 cut(s)	1284
HindIII	AAGCTT	1 cut(s)	1013
HinfI	GANTC	6 cut(s)	15, 132, 1193, 1208, 1217, 1424
HpaI	GTTAAC	1 cut(s)	1284
HpaII	CCGG	3 cut(s)	608, 1113, 1403
HphI	GGTGA	4 cut(s)	650, 713, 1040, 1433
Hpy166II	GTNNAC	6 cut(s)	391, 662, 728, 1076, 1284, 1408
Hpy188I	TCNGA	2 cut(s)	20, 1207
Hpy188III	TCNNGA	5 cut(s)	28, 920, 1157, 1197, 1433
Hpy8I	GTNNAC	6 cut(s)	391, 662, 728, 1076, 1284, 1408
Hpy99I	CGWCG	4 cut(s)	209, 215, 350, 676
HpyAV	CCTTC	4 cut(s)	15, 151, 675, 1337
HpyCH4III	ACNGT	7 cut(s)	638, 832, 854, 926, 946, 1226, 1397
HpyCH4IV	ACGT	4 cut(s)	433, 671, 932, 1254
HpyCH4V	TGCA	7 cut(s)	391, 508, 566, 1068, 1289, 1359, 1480
HpyF10VI	GCNNNNNNNGC	7 cut(s)	120, 236, 413, 485, 514, 604, 1065
HpyF3I	CTNAG	2 cut(s)	224, 999
HpySE526I	ACGT	4 cut(s)	433, 671, 932, 1254
Hsp92I	GRCGYC	2 cut(s)	210, 348
Hsp92II	CATG	7 cut(s)	198, 407, 652, 811, 918, 1072, 1267
HspAI	GCGC	5 cut(s)	228, 407, 530, 743, 954
KspAI	GTTAAC	1 cut(s)	1284
LguI	GCTCTTC	1 cut(s)	1392
Lsp1109I	GCAGC	5 cut(s)	101, 400, 403, 1071, 1464
LweI	GCATC	5 cut(s)	21, 879, 975, 1346, 1477
MaeI	CTAG	2 cut(s)	1382, 1433
MaeII	ACGT	4 cut(s)	433, 671, 932, 1254
MaeIII	GTNAC	5 cut(s)	686, 783, 836, 1132, 1250
MboII	GAAGA	8 cut(s)	21, 277, 292, 887, 903, 1188, 1379, 1436
MhlI	GDGCHC	3 cut(s)	277, 393, 481
MluCI	AATT	4 cut(s)	779, 1101, 1201, 1428
MlyI	GAGTC	1 cut(s)	1187
MroXI	GAANNNNTTC	1 cut(s)	1428
MseI	TTAA	6 cut(s)	492, 789, 1017, 1094, 1118, 1283
MspCI	CTTAAG	1 cut(s)	1093
MspI	CCGG	3 cut(s)	608, 1113, 1403
MspR9I	CCNGG	3 cut(s)	474, 1113, 1367
Mva1269I	GAATGC	2 cut(s)	1000, 1166
MvaI	CCWGG	2 cut(s)	474, 1367
MvnI	CGCG	1 cut(s)	530
MwoI	GCNNNNNNNGC	7 cut(s)	120, 236, 413, 485, 514, 604, 1065
NciI	CCSGG	1 cut(s)	1113
NcoI	CCATGG	2 cut(s)	648, 1263
NlaIII	CATG	7 cut(s)	198, 407, 652, 811, 918, 1072, 1267
NlaIV	GGNNCC	1 cut(s)	336
NmeAIII	GCCGAG	1 cut(s)	311
NmuCI	GTSAC	2 cut(s)	783, 1132
NsbI	TGCGCA	1 cut(s)	744
NspI	RCATGY	2 cut(s)	407, 1072
PaeI	GCATGC	1 cut(s)	407
PciSI	GCTCTTC	1 cut(s)	1392
PctI	GAATGC	2 cut(s)	1000, 1166
PdmI	GAANNNNTTC	1 cut(s)	1428
PfeI	GAWTC	5 cut(s)	15, 132, 1208, 1217, 1424
PflFI	GACNNNGTC	1 cut(s)	350
PflMI	CCANNNNNTGG	1 cut(s)	808
PkrI	GCNGC	7 cut(s)	116, 415, 418, 766, 1041, 1061, 1479
PleI	GAGTC	1 cut(s)	1187
PpsI	GAGTC	1 cut(s)	1187
Ppu21I	YACGTR	1 cut(s)	434
Psp1406I	AACGTT	1 cut(s)	1254
Psp6I	CCWGG	2 cut(s)	472, 1365
PspFI	CCCAGC	1 cut(s)	548
PspGI	CCWGG	2 cut(s)	472, 1365
PspN4I	GGNNCC	1 cut(s)	336
PspPI	GGNCC	5 cut(s)	138, 166, 268, 334, 1146
PstNI	CAGNNNCTG	2 cut(s)	135, 1065
PsyI	GACNNNGTC	1 cut(s)	350
RsaI	GTAC	5 cut(s)	663, 729, 851, 1321, 1338
RsaNI	GTAC	5 cut(s)	662, 728, 850, 1320, 1337
SapI	GCTCTTC	1 cut(s)	1392
SaqAI	TTAA	6 cut(s)	492, 789, 1017, 1094, 1118, 1283
SatI	GCNGC	7 cut(s)	115, 414, 417, 765, 1040, 1060, 1478
Sau96I	GGNCC	5 cut(s)	138, 166, 268, 334, 1146
SchI	GAGTC	1 cut(s)	1187
ScrFI	CCNGG	3 cut(s)	474, 1113, 1367
SduI	GDGCHC	3 cut(s)	277, 393, 481
SfaNI	GCATC	5 cut(s)	21, 879, 975, 1346, 1477
SfcI	CTRYAG	1 cut(s)	127
SmlI	CTYRAG	2 cut(s)	1093, 1195
SmoI	CTYRAG	2 cut(s)	1093, 1195
SnaBI	TACGTA	1 cut(s)	434
SphI	GCATGC	1 cut(s)	407
Sse9I	AATT	4 cut(s)	779, 1101, 1201, 1428
SsiI	CCGC	7 cut(s)	528, 578, 585, 764, 1040, 1190, 1230
SspI	AATATT	1 cut(s)	973
SspMI	CTAG	2 cut(s)	1382, 1433
StyD4I	CCNGG	3 cut(s)	472, 1111, 1365
StyI	CCWWGG	2 cut(s)	648, 1263
TaaI	ACNGT	7 cut(s)	638, 832, 854, 926, 946, 1226, 1397
TaiI	ACGT	4 cut(s)	436, 674, 935, 1257
TaqI	TCGA	2 cut(s)	535, 1294
TasI	AATT	4 cut(s)	779, 1101, 1201, 1428
TatI	WGTACW	1 cut(s)	1336
TauI	GCSGC	2 cut(s)	767, 1042
TfiI	GAWTC	5 cut(s)	15, 132, 1208, 1217, 1424
Tru1I	TTAA	6 cut(s)	492, 789, 1017, 1094, 1118, 1283
Tru9I	TTAA	6 cut(s)	492, 789, 1017, 1094, 1118, 1283
TscAI	CASTG	3 cut(s)	345, 427, 573
TseFI	GTSAC	2 cut(s)	783, 1132
TseI	GCWGC	5 cut(s)	114, 413, 416, 1059, 1477
Tsp45I	GTSAC	2 cut(s)	783, 1132
TspDTI	ATGAA	2 cut(s)	792, 903
TspGWI	ACGGA	3 cut(s)	193, 612, 725
TspRI	CASTG	3 cut(s)	345, 427, 573
Tth111I	GACNNNGTC	1 cut(s)	350
Van91I	CCANNNNNTGG	1 cut(s)	808
Vha464I	CTTAAG	1 cut(s)	1093
VneI	GTGCAC	1 cut(s)	389
XapI	RAATTY	1 cut(s)	1201
XbaI	TCTAGA	1 cut(s)	1432
XceI	RCATGY	2 cut(s)	407, 1072
XmiI	GTMKAC	1 cut(s)	1407
XmnI	GAANNNNTTC	1 cut(s)	1428
XspI	CTAG	2 cut(s)	1382, 1433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.