Class I heat shock
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g13900 |
| malus_domestica | MD05G1240300.v1.1 MD10G1218300.v1.1 |
| prunus_persica | Prupe.4G125800_v2.0.a1 |
| pyrus_communis | pycom05g21630 |
| rosa_chinensis | RchiOBHm_Chr5g0023111 |
| rosa_laevigata | RLG00000032699 |
| rosa_roxburghii | Rroxscaffold_1G00056240 |
| rosa_rugosa | Rorug05G0077200 |
| rosa_samantha | Rh5AG163300 Rh5BG162600 Rh5CG177500 Rh5DG163900 |
| rosa_wichuraiana | Rw5G014730 Rw5G015000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 243 |
| AgsI | TTSAA | 1 cut(s) | 385 |
| AjnI | CCWGG | 1 cut(s) | 139 |
| AluBI | AGCT | 3 cut(s) | 166, 279, 479 |
| AluI | AGCT | 3 cut(s) | 166, 279, 479 |
| Alw26I | GTCTC | 4 cut(s) | 9, 21, 48, 98 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 221 |
| AoxI | GGCC | 1 cut(s) | 142 |
| ApeKI | GCWGC | 3 cut(s) | 276, 298, 471 |
| AspA2I | CCTAGG | 1 cut(s) | 368 |
| AspS9I | GGNCC | 2 cut(s) | 25, 232 |
| AvaII | GGWCC | 2 cut(s) | 25, 232 |
| AvrII | CCTAGG | 1 cut(s) | 368 |
| BanII | GRGCYC | 1 cut(s) | 456 |
| BbvI | GCAGC | 3 cut(s) | 285, 288, 458 |
| BccI | CCATC | 1 cut(s) | 338 |
| BciT130I | CCWGG | 1 cut(s) | 141 |
| BcoDI | GTCTC | 4 cut(s) | 9, 21, 48, 98 |
| BfaI | CTAG | 2 cut(s) | 285, 369 |
| BfmI | CTRYAG | 1 cut(s) | 256 |
| BglII | AGATCT | 1 cut(s) | 417 |
| BisI | GCNGC | 3 cut(s) | 277, 299, 472 |
| BlnI | CCTAGG | 1 cut(s) | 368 |
| BlsI | GCNGC | 3 cut(s) | 278, 300, 473 |
| Bme1390I | CCNGG | 1 cut(s) | 141 |
| Bme18I | GGWCC | 2 cut(s) | 25, 232 |
| BmgT120I | GGNCC | 2 cut(s) | 25, 232 |
| BmiI | GGNNCC | 2 cut(s) | 234, 445 |
| BmrFI | CCNGG | 1 cut(s) | 141 |
| BmsI | GCATC | 1 cut(s) | 409 |
| BpmI | CTGGAG | 1 cut(s) | 444 |
| BpuEI | CTTGAG | 1 cut(s) | 188 |
| BsaJI | CCNNGG | 2 cut(s) | 312, 368 |
| Bse1I | ACTGG | 1 cut(s) | 101 |
| BseBI | CCWGG | 1 cut(s) | 141 |
| BseDI | CCNNGG | 2 cut(s) | 312, 368 |
| BseGI | GGATG | 2 cut(s) | 163, 382 |
| BseMII | CTCAG | 2 cut(s) | 64, 78 |
| BseNI | ACTGG | 1 cut(s) | 101 |
| BseRI | GAGGAG | 1 cut(s) | 36 |
| BseXI | GCAGC | 3 cut(s) | 285, 288, 458 |
| BsgI | GTGCAG | 1 cut(s) | 222 |
| BshFI | GGCC | 1 cut(s) | 144 |
| BsmAI | GTCTC | 4 cut(s) | 9, 21, 48, 98 |
| BsnI | GGCC | 1 cut(s) | 144 |
| Bsp1286I | GDGCHC | 1 cut(s) | 456 |
| Bsp143I | GATC | 2 cut(s) | 133, 417 |
| BspANI | GGCC | 1 cut(s) | 144 |
| BspCNI | CTCAG | 2 cut(s) | 63, 77 |
| BspLI | GGNNCC | 2 cut(s) | 234, 445 |
| BspMAI | CTGCAG | 1 cut(s) | 260 |
| BsrI | ACTGG | 1 cut(s) | 101 |
| BssECI | CCNNGG | 2 cut(s) | 312, 368 |
| BssMI | GATC | 2 cut(s) | 133, 417 |
| BssT1I | CCWWGG | 2 cut(s) | 312, 368 |
| Bst2UI | CCWGG | 1 cut(s) | 141 |
| Bst4CI | ACNGT | 1 cut(s) | 364 |
| BstDEI | CTNAG | 3 cut(s) | 50, 64, 480 |
| BstF5I | GGATG | 2 cut(s) | 163, 382 |
| BstKTI | GATC | 2 cut(s) | 136, 420 |
| BstMAI | GTCTC | 4 cut(s) | 9, 21, 48, 98 |
| BstMBI | GATC | 2 cut(s) | 133, 417 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 172, 468 |
| BstNI | CCWGG | 1 cut(s) | 141 |
| BstNSI | RCATGY | 1 cut(s) | 116 |
| BstSCI | CCNGG | 1 cut(s) | 139 |
| BstSFI | CTRYAG | 1 cut(s) | 256 |
| BstV1I | GCAGC | 3 cut(s) | 285, 288, 458 |
| BstX2I | RGATCY | 1 cut(s) | 417 |
| BstYI | RGATCY | 1 cut(s) | 417 |
| BsuRI | GGCC | 1 cut(s) | 144 |
| BtsCI | GGATG | 2 cut(s) | 163, 382 |
| BtsI | GCAGTG | 1 cut(s) | 253 |
| BtsIMutI | CAGTG | 3 cut(s) | 205, 253, 369 |
| CaiI | CAGNNNCTG | 1 cut(s) | 221 |
| Cfr13I | GGNCC | 2 cut(s) | 25, 232 |
| CseI | GACGC | 1 cut(s) | 468 |
| CviAII | CATG | 6 cut(s) | 91, 113, 176, 194, 337, 440 |
| DdeI | CTNAG | 3 cut(s) | 50, 64, 480 |
| DpnI | GATC | 2 cut(s) | 135, 419 |
| DpnII | GATC | 2 cut(s) | 133, 417 |
| DraI | TTTAAA | 1 cut(s) | 127 |
| Eco130I | CCWWGG | 2 cut(s) | 312, 368 |
| Eco147I | AGGCCT | 1 cut(s) | 144 |
| Eco24I | GRGCYC | 1 cut(s) | 456 |
| Eco47I | GGWCC | 2 cut(s) | 25, 232 |
| Eco57I | CTGAAG | 1 cut(s) | 243 |
| EcoO109I | RGGNCCY | 1 cut(s) | 232 |
| EcoRII | CCWGG | 1 cut(s) | 139 |
| EcoT14I | CCWWGG | 2 cut(s) | 312, 368 |
| EcoT38I | GRGCYC | 1 cut(s) | 456 |
| ErhI | CCWWGG | 2 cut(s) | 312, 368 |
| FaeI | CATG | 6 cut(s) | 94, 116, 179, 197, 340, 443 |
| FaiI | YATR | 7 cut(s) | 71, 92, 114, 177, 195, 338, 441 |
| FatI | CATG | 6 cut(s) | 90, 112, 175, 193, 336, 439 |
| Fnu4HI | GCNGC | 3 cut(s) | 277, 299, 472 |
| FokI | GGATG | 2 cut(s) | 170, 389 |
| FriOI | GRGCYC | 1 cut(s) | 456 |
| Fsp4HI | GCNGC | 3 cut(s) | 277, 299, 472 |
| FspBI | CTAG | 2 cut(s) | 285, 369 |
| GluI | GCNGC | 3 cut(s) | 277, 299, 472 |
| GsuI | CTGGAG | 1 cut(s) | 444 |
| HaeIII | GGCC | 1 cut(s) | 144 |
| HgaI | GACGC | 1 cut(s) | 468 |
| Hin1II | CATG | 6 cut(s) | 94, 116, 179, 197, 340, 443 |
| HindIII | AAGCTT | 2 cut(s) | 164, 477 |
| Hpy188I | TCNGA | 3 cut(s) | 53, 67, 458 |
| Hpy188III | TCNNGA | 2 cut(s) | 285, 423 |
| HpyAV | CCTTC | 2 cut(s) | 94, 403 |
| HpyCH4III | ACNGT | 1 cut(s) | 364 |
| HpyCH4IV | ACGT | 1 cut(s) | 248 |
| HpyCH4V | TGCA | 5 cut(s) | 13, 175, 203, 258, 474 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 172, 468 |
| HpyF3I | CTNAG | 3 cut(s) | 50, 64, 480 |
| HpySE526I | ACGT | 1 cut(s) | 248 |
| Hsp92II | CATG | 6 cut(s) | 94, 116, 179, 197, 340, 443 |
| Kzo9I | GATC | 2 cut(s) | 133, 417 |
| LmnI | GCTCC | 1 cut(s) | 449 |
| LpnPI | CCDG | 7 cut(s) | 82, 126, 153, 234, 244, 315, 408 |
| Lsp1109I | GCAGC | 3 cut(s) | 285, 288, 458 |
| LweI | GCATC | 1 cut(s) | 409 |
| MaeI | CTAG | 2 cut(s) | 285, 369 |
| MaeII | ACGT | 1 cut(s) | 248 |
| MalI | GATC | 2 cut(s) | 135, 419 |
| MboI | GATC | 2 cut(s) | 133, 417 |
| MboII | GAAGA | 3 cut(s) | 128, 397, 443 |
| MflI | RGATCY | 1 cut(s) | 417 |
| MhlI | GDGCHC | 1 cut(s) | 456 |
| MluCI | AATT | 2 cut(s) | 129, 357 |
| MnlI | CCTC | 5 cut(s) | 57, 148, 163, 223, 367 |
| MseI | TTAA | 3 cut(s) | 60, 126, 327 |
| MslI | CAYNNNNRTG | 2 cut(s) | 89, 198 |
| MspR9I | CCNGG | 1 cut(s) | 141 |
| MvaI | CCWGG | 1 cut(s) | 141 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 172, 468 |
| NdeII | GATC | 2 cut(s) | 133, 417 |
| NlaIII | CATG | 6 cut(s) | 94, 116, 179, 197, 340, 443 |
| NlaIV | GGNNCC | 2 cut(s) | 234, 445 |
| NspI | RCATGY | 1 cut(s) | 116 |
| PceI | AGGCCT | 1 cut(s) | 144 |
| PkrI | GCNGC | 3 cut(s) | 278, 300, 473 |
| PpuMI | RGGWCCY | 1 cut(s) | 232 |
| Psp5II | RGGWCCY | 1 cut(s) | 232 |
| Psp6I | CCWGG | 1 cut(s) | 139 |
| PspGI | CCWGG | 1 cut(s) | 139 |
| PspN4I | GGNNCC | 2 cut(s) | 234, 445 |
| PspPI | GGNCC | 2 cut(s) | 25, 232 |
| PspPPI | RGGWCCY | 1 cut(s) | 232 |
| PstI | CTGCAG | 1 cut(s) | 260 |
| PstNI | CAGNNNCTG | 1 cut(s) | 221 |
| PsuI | RGATCY | 1 cut(s) | 417 |
| RseI | CAYNNNNRTG | 2 cut(s) | 89, 198 |
| SaqAI | TTAA | 3 cut(s) | 60, 126, 327 |
| SatI | GCNGC | 3 cut(s) | 277, 299, 472 |
| Sau3AI | GATC | 2 cut(s) | 133, 417 |
| Sau96I | GGNCC | 2 cut(s) | 25, 232 |
| ScrFI | CCNGG | 1 cut(s) | 141 |
| SduI | GDGCHC | 1 cut(s) | 456 |
| SetI | ASST | 8 cut(s) | 89, 168, 174, 251, 281, 318, 414, 481 |
| SfaNI | GCATC | 1 cut(s) | 409 |
| SfcI | CTRYAG | 1 cut(s) | 256 |
| SinI | GGWCC | 2 cut(s) | 25, 232 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 89, 198 |
| SmlI | CTYRAG | 1 cut(s) | 167 |
| SmoI | CTYRAG | 1 cut(s) | 167 |
| Sse9I | AATT | 2 cut(s) | 129, 357 |
| SseBI | AGGCCT | 1 cut(s) | 144 |
| SspMI | CTAG | 2 cut(s) | 285, 369 |
| StuI | AGGCCT | 1 cut(s) | 144 |
| StyD4I | CCNGG | 1 cut(s) | 139 |
| StyI | CCWWGG | 2 cut(s) | 312, 368 |
| TaaI | ACNGT | 1 cut(s) | 364 |
| TaiI | ACGT | 1 cut(s) | 251 |
| TasI | AATT | 2 cut(s) | 129, 357 |
| Tru1I | TTAA | 3 cut(s) | 60, 126, 327 |
| Tru9I | TTAA | 3 cut(s) | 60, 126, 327 |
| TscAI | CASTG | 3 cut(s) | 205, 260, 369 |
| TseI | GCWGC | 3 cut(s) | 276, 298, 471 |
| TspDTI | ATGAA | 4 cut(s) | 182, 192, 258, 444 |
| TspRI | CASTG | 3 cut(s) | 205, 260, 369 |
| VpaK11BI | GGWCC | 2 cut(s) | 25, 232 |
| XbaI | TCTAGA | 1 cut(s) | 284 |
| XceI | RCATGY | 1 cut(s) | 116 |
| XmaJI | CCTAGG | 1 cut(s) | 368 |
| XspI | CTAG | 2 cut(s) | 285, 369 |